>input_sequence_62933
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---------------------ATGGCCGAGATCGACGAGAATTCCCTCCGCAATAACAACAGCAGCACCAATACCAAGAC
CCAGAAGGTAAGAAACAA-GCAAAGTTCGAATTTTAACGCCATTTCTTTTGTAACTCCACGACTTAACATTCGATCAGCC
GCTCACAATCTTCAAACTGAT--TCAGAAATCGACTGAGATTACTGTCGCCACCCCGACCCGGAAGACCACGGAGCGCGC
AAAGGAGCAGAGTTCTCAGAAAGAGAAGGCGGAGGAGACCATGGTTGCGGTGTCAGAGACTAGAGCGCCTTCGTCCAAGA
CCACCGAGACGCGCACGGTGAGCATCGTGGCCGAGACCCCAGGACGGAGGTCAGGCCGCCGTTCGCGCCGGGCGTCGCGC
GACTTCGACCAGAACCCCGGCTTGTACGCCAGCCATCTCCTCGAGGACATCCAGAACTACCACACCTCCGCTACGGCCAC
CCCCGGAACGCCGCCATCCTTCACGCTACCGGCCTGCGTCTCCAAGGCGCAGTCCATCGTCGACGCCGTCGCCGACCTCA
ACTCCTCATCGTCAGAGAGCCGCACCTGCGAGCCCGATCGGAGCGTCGACGACAAGGCCTCTGTCAACGCGGCGGCCGGC
GGGGATGACCTTGACGCGCCGAGCGTGCACAGGTACGTGTCGGTGCGGGACATCCGTGGCCGCGGGGAGATGGAGCTGCA
GGAGTCCGCGGGGAGCAACAGCCTCTCCGGCAACCTGTGGACGCCGTCGTGCGAGTCCACGGACCGGACGTGGAGCGGCT
CGCGGTCGTCGAACAACGGCGACGAGGTCGTCGAGCAGGTCCCTAGCCACCACAGTGGCGCGCGCAGCCCGGTGAACCGG
CCCAGGCAGAGCAAGCAGAGGGCGGCTGCGCAGCTGGAGCCAAGCGGCCGGTCGCGCACCGGCAACTCCGGCGTCAATGC
TCACCGTGGACGCAGCGCTCACCGCGGCAGCGGCAGCGTGGCGAGCGGCCGATCGGGCGTCCGTGGCGTCTCGGCGAGCA
CGTAG---------------------------------------------------------------------------
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>chr6B_1_TraesCS6B01G263500
ACCACCGCGAGAGAGGATTTCAAATCTCACCTCA----AGCTGTGACCGTCCGTCATCGTCACCACCGAGTACTAACACG
AAGCACCACGCACACCGATCACGTACTTAATCCCCCCTCACACT-CCCCCCGAAGCTCTGCATAAATACCAGCTCCACGC
CTTCCAACCCCAGACTTTCCATTCCTTGCATCCGGAGCTCGCCAA-CAATCCGTAGTTCCGACGAGTCACCA-CCATGGG
GCTCTGTTTCAGCAAGAAGCAGCAGGACAA------GCCA------CCGCCGCCGAGCGCCCCTGCGGCCACCACC----
--------------AAGCCCAAGAAGCCTGCCAAGGTCGCCGCAGCCGCGGTGGTCGCCGGCGATGAGAAGGCCAAGAAG
GCGCCGCAGCCGAGGAGGGCGTCCAACGCGGACGAGTCTGCCGCGGCCGGCAAGAAGGCGGCGCCGATCGTCGTGAAGGC
CAACAAGGCGGCCGCGGGCGGGGA---GGAGGAGAAGAAGGTGGAGCAGGCGAGGCCGGTGGTGGTGGTGGCCAAGGGGC
CGATGCCGGTGCGCACGTCCAGCTGCACCAAGGAGGAGGTGGACGCCATCCTCATCCAGTGCGGCCGCCTCAGCCGGAGC
TCGTCCGGGAGCGAGACGAGGGGCGGGCACCGCTCCAAGAGGAGCTCCGACTTTGATCCGTCCGGGGCCGGAGGCGCGGA
CGAGGAGGGCGACTGGGAGAGGAACGGGGTCCCCGTGTCCAGGCCGTCGCCCCACCGGGGCTCGCCGCAGAGGAAGCGCT
CGGGGAGCCGGGAGAGGACCGGCGGAGGGAGCCG----------------------------------------------
-------------------------------------------------------CCGTTCCGGCGAGGGAGAAGGGCCG
CGCACCGTCGCCCGCGGCCGCGCCCGGGAAGAGGTGCGCGTCTCCGCGATCGAGCTCGCCTGCGAGGGTGGCCGCGGCCA
ATGAGAATGCTGGAGGGGGACAGAAGACGGCGGGGCAAACGCCGGCGCTGAGCCGGAGCTCGTCAAGGAAGGCCGAGCAG
TCGCCGCTCCGGCGCAGCCCCATGGCCGAGATCGACGAGAATTCCCTCCGCAATAACAACAGCAGCACCAATACCAAGAC
CCAGAAGGTAAGAAACAA-GCAAAGTTCGAATTTTAACGCCATTTCTTTTGTAACTCCACGACTTAACATTCGATCAGCC
GCTCACAATCTTCAAACTGAT--TCAGAAATCGACTGAGATTACTGTCGCCACCCCGACCCGGAAGACCACGGAGCGCGC
AAAGGAGCAGAGTTCTCAGAAAGAGAAGGCGGAGGAGACCATGGTTGCGGTGTCAGAGACTAGAGCGCCTTCGTCCAAGA
CCACCGAGACGCGCACGGTGAGCATCGTGGCCGAGACCCCAGGACGGAGGTCAGGCCGCCGTTCGCGCCGGGCGTCGCGC
GACTTCGACCAGAACCCCGGCTTGTACGCCAGCCATCTCCTCGAGGACATCCAGAACTACCACACCTCCGCTACGGCCAC
CCCCGGAACGCCGCCATCCTTCACGCTACCGGCCTGCGTCTCCAAGGCGCAGTCCATCGTCGACGCCGTCGCCGACCTCA
ACTCCTCATCGTCAGAGAGCCGCACCTGCGAGCCCGATCGGAGCGTCGACGACAAGGCCTCTGTCAACGCGGCGGCCGGC
GGGGATGACCTTGACGCGCCGAGCGTGCACAGGTACGTGTCGGTGCGGGACATCCGTGGCCGCGGGGAGATGGAGCTGCA
GGAGTCCGCGGGGAGCAACAGCCTCTCCGGCAACCTGTGGACGCCGTCGTGCGAGTCCACGGACCGGACGTGGAGCGGCT
CGCGGTCGTCGAACAACGGCGACGAGGTCGTCGAGCAGGTCCCTAGCCACCACAGTGGCGCGCGCAGCCCGGTGAACCGG
CCCAGGCAGAGCAAGCAGAGGGCGGCTGCGCAGCTGGAGCCAAGCGGCCGGTCGCGCACCGGCAACTCCGGCGTCAATGC
TCACCGTGGACGCAGCGCTCACCGCGGCAGCGGCAGCGTGGCGAGCGGCCGATCGGGCGTCCGTGGCGTCTCGGCGAGCA
CGTAGTGAGGGAGATTAGGCAAGATGTGTGAGATGGCAG---TGTTGCTAGCGGCAAGACGGATTGCCGCTTTCACGGTC
AGATCTCAAGTGTTTGTTTTTGTGTTGCGATGCATTC--------TTCAGATGTAGTCTTGCTAACGTTATCAATTTAGA
CCATGCTATCATTA-----TCTGGGAGCAAACCTGTATCCTCTATTCAGGCCTGTTGATCTGATGATCAGTTCTGGGCTC
TGGATTACTGAGCCATATGGATCAGAGAAGAGCTTTTCTCGAGTTTCTGATGCCTTGCTTCCCATTATGCAGAAACATTT
TTGTCTGGTCTCTCACTATGCAGAAATGATTGGCATATACGTGTACCAGCAGAAACATTTTTGTCTTAAAAA----AAGA
TCGTCATTTTTACAGATTATGTGCAAGGTTAACGGTAAAACAGAAGCTGTCATGGTCACACGAGCTTTGGTGATTTGGGC
ATTTAACATTAAAAAAAAAAGACTGTATACGTTGTTTTTAAAGGTTCCCATGGAGAAATGAACACCAAGAATTCATAGCT
CAGTTGGTTAGAGCACCCGAGTTCAACTCTCACACGGAGCAATGCTATTCTTACGTACAAAAAGTT-TACACACAAGTTC
ATTTTGTGGCAGTTAGCTAAAATCAGTGAAGCGGTTCCCATCTGTAACTTGTACAAAATGCTATTCTTGAATTCACAAGA
GGAGCTTTTGGGGTCGATATGTGCT-GGTGCAATCGAATAAAAAATGACATAATA-ATTATATCTTATAAGTAACCATGG
AAAATTCGTCAGCTGGCTTTCATAGCTCAGTTGGTTAGAGCACCCGTTTAGTAAGCGGGAGGTCTTGAGTTCAACTCTCA
ATGAAAGCAATTATTTTTGTAATTCTACAGAGCTTTGTTCAGACTG---ATATAGCATTAAAACCTGCTCGTTTTCTCTT
TTTGATTGTTCGGAAGGCACAAGCCCCAAAAATCGGTGGATCAGTCTGCATGCAGCTAAATTCTGAATTGG
>chr6A_7
------GCGAGAGAGGATTTCAAATCTCACCTCAGCTCAGCCGTGACCGTCGTCGAGCGAGA-----GAGTACTAACACG
AAGCACCACGCACACCGATCGCGTACTTAATCCCCCCTCACACTCCCCCCCGAAGCTCTGCATAAATACCAGCGCCACGC
CTTCCAACCCCAGACTTTCCATTGCTTGCACCCGGAGCTCACCAAACCATCCGTCGAC--------TGAGTCGCCATGGG
GCTCTGTTTCAGCAAGAAGCAGCAGGGCAA------GCCGCCGCCGCCGCAGCCGACCGCGGCTGCGGCCACCACC----
--------------AAG------------------GTCGCCGCAGCCGCGGTGGTCGCCGGCGATGAGAAGGCCAAGAAG
GCGCCGCAGCCGAGGAGGGCGTCCAACGCGGACGAGTCCGCCGCGGCCGCCAAGAAGGCGGCGCCGATCGTCGTGAAGGC
TAACAAGGCGGCTGCGGGCGGGGA---GGAGGGGGAGAAGAAGGAGGAGGCGAGGCCGGTGGTGGTGGTGGCCAAGGGGC
CGATGCCGGTGCGCACGTCCAGCTGCACCAAGGAGGAGGTGGACGCCATCCTCATCCAGTGCGGGCGACTCAGCCGGAGT
TCGTCCGGGAGCGAGACGAGGGGCGGCCACCGCTCCAAGAGGAGCTCCGACTTTGATCCGTCCGGGGCCGGTGGCGCGGA
CGAGGAGGGCGACTGGGAGAGAAACGGGGTCCCCGTGTCGAGGCCGTCGCCCCACCGGGGCTCGCCGCAGAGGAAGCGCT
CCGGGAGCCGGGAGAGGACCGGCAGCGGGAGCCGCAGGTCGAGCCGATCGCCCGGACGGCGTGGCGAGGGCGGCGCGCCC
TCTGCGACCTCGGCGGGCTCCGGCGCCGCCAGACAGCAGCCGGGGAAGATGGTCTCCGTTCCGGCGAGGGAGAAAGGGCG
CGCACCGTCGCCCGCGGCCGCGTCCGGGAAGAGGTGCGCGTCTCCGCGATCAAGCTCGCCTGCGAGGGTGACCGCGGCCA
ATGAGAATGCTGGAGGGGGACAGAAGACGGCGGGGCAAACACCGGCGCTGAGCCGGAGCTCGTCCAGGAAGGCCGAGCAG
TCGCCACTCCGGCGCAGCCCCATGGCCGAGATCGACGAGAATTCCCTCCGCAATAACAACAGCAGCACCAACACCAAGCC
CCAGAAGGTAAGAAACAA-TCAAAGTTCGAGTTTTAACGCCCTTCCTTTTGTAACTCCACATCTTAACAACCGATCAGCC
GCTCACAATCTTCAAACTGAT--TCAGAAATCGACGGAGATTGCTGTCGCCACCCCGACCCGGAAGACCACGGAGCGCGC
AAAGGAGCAGAGTTCTCAGAAGGAGAAGGTGGAGGAGACCATCATTGCAGCGTCGGAGACGAGAGCACCGTCGTCCAAGA
CCACCGAGACGCGCACGGTGAGCATCGTGGCCGAGACCCCAGGCCGGAGGTCAGGCCGCCGTTCGCGCCGTGCGTCGCGC
GACTTCGATCAGAACCCCGGCTTGTACGCCAGCCATCTCCTCGAGGACATCCAGAACTACCACACCTCCGCTACGGCTAC
CCCCGGAACGCCGCCATCCTTCACGCTACCGGCCTGCGTCTCCAAGGCGCAGTCCATCGTCGACGCCGTCGCCGACCTCA
ACTCCTCATCGTCGGAGAGCCGCACCTGCGAGCCCGATCGGAGCGTCGACGACAAGGCCTCCGTCAACGCGGCGGCCGGC
GGGGACGACCTTGACGCGCCGAGCGTGCACAGGTACGTGTCGGTGCGGGACATCCGTGGCCGCGGGGAGATGGAGCTGCA
GGAGTCCGCGGGGAGCAATAGCCTCTCCGGCAACCTGTGGACGCCGTCGTGCGAGTCCACGGACCGGACGTGGAGCGGCT
CGCGGTCGTCGAACAACGGCGACGAGGTCGTCGAGCAGGTCCCTAGCCACCACGGTGGCGCGCGCAGCCCGGTGAACCGG
CCCAGGCAGAGCAAGCAGAGGGCGGCGGCGCAGCTGGAGCCCAGCGGCCGGTCGCGCGCCGGCAGCTCCGGCGTCAATGC
TCACCGTGGACGCAGCGCTCACCGCGGCAGCGGCAGCGTGGTGAGCGGCCGATCGGGCGCCCGTGGCGTCTCGGCGAGCT
CGTAGTGAGGTAGATCAGGCAAGATGTATGAGATGGTAGTGTTGTTGCTAGCGGCAAGATGGATTGCTGCTTTCACGGTC
AGATCTGTAGTGTTTGTTTT-GTGTTGGGTTGTTTGGCGATGCAGTTCAGATGTAGTCTTGCTAACGTTATCAACGTGGA
CC------TCATTA-----TTTGGGAGCAAACTTGTAACCTTTATTCAACCTGTTTGATCCGACGATCGGTTCCGG----
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>chr6D_66
---------------------------------------------------------------------GTACTAACACG
AAGCACCACGCACACCGATCGCGTACTTAATCCCCCCTCACATT-CCCCCCGAAGCTCTGCATAAATACCAGCTCCACGC
GTTCCAACCCCAGACTTTCCATTGCTTGCGCCCGGAGCTCACCAA-CCATCCGTCGTCCCGTCCAGTGAGTCGCCATGGG
GCTCTGTTTCAGCAAGAAGCAGCAGGACAAGCCACCGCCGCCGCCGCCGCAGCCGAGCGCGGCTGCGGCCACCACCAAGC
CCAAGAAGCCCGCCAAG------------------GTCGCCGCCGCCGCAGTGGTCGCGGGCGACGAGAAGGCCAAGAAG
GCGCCGCAGCCGAGGAGGGCGTCCAACGCGGACGAGTCCGCCGCGGACGGCAAGAAGGCGGCACCGATCGTCGTCAAGGC
TAACAAGGCGGCCGCGGGCGGGGAGGCGGAGGAGAAGAAGGAGGAGCAGGCGAGGCCGGTGGTGGTGGTGGCCAAGGGGC
CGATGCCGGTGCGCACGTCCAGCTGCACCAAGGAGGAGGTGGACGCCATCCTCATCCAGTGCGGCCGCCTCAGCCGGAGC
TCGTCCGGGAGCGAGACGAGGGGCGGGCACCGCTCCAAGAGGAGCTCCGACTTTGATCCGTCCGGGGCCGCTGGCGCGGA
CGAGGAGGGCGACTGGGAGAGGAACGGGGTCCCCGTGTCGAGGCCGTCGCCCCACCGGGGCTCGCCGCAGAGGAAGCGCT
CGGGGAGCCGGGAGAGGACCGGCGGAGGGAGCCGCAGGTCGAGCCGATCGCCCGGACGGCGTGGCGAGGGCGGCGCGCCC
TCTGCTACCTCGGCGGGCTCCGGCGTCGCCAGACAGCAGCCCGGGAAGATGGTCTCCGTTCCGGCGAGGGAGAAAGGGCG
CGCACCGTCGCCCGCGGCCGCGTCCGGCAAGAGGTGCGCGTCTCCGCGATCAAGCTCGCCTGCGAGGGTGACCGCTGCCA
ATGAGAATGCTGGAGGGGGACAGAAGACGGCGGGGCAAACGCCGGCGCTGAGCCGGAGCTCGTCCAGGAAGGCCGAGCAG
TCGCCGCTCCGGCGCAGCCCCATGGCCGAGATCGACGAGAATTCTCTCCGCAATAACAACAGCAGCACCAACACCAAGCC
CCAGAAGGTAAGAAACAAAGCAAAGTTCGAATTTTAACGCCCTTCCTTTTGTAACTCCACGTCTTAACATCCGATCAGCC
GCTCACAATCTTCAAACTGATATTCAGAAATCGACGGAGATTGCCGTCGCCACCCCGACCCGGAAGACCGCGGAGCGCGC
AAAGGAGCAGAGTTCTCAGAAGGAGAAGGCGGAGGAGACCATCGGTGCGGCGTCGGAGACGAGAGCACCGTCGTCCAAGA
CCACCGAGACGCGCACGGTGAGCATCGTGGCCGAGACCCCAGGACGGAGGTCAGGCCGCCGTTCGCGCCGGGCGTCGCGC
GACTTCGACCAGAACCCCGGCTTGTACGCCAGCCATCTCCTCGAGGACATCCAGAACTACCACACCTCCGCTACGGCCAC
CCCCGGAACGCCGCCATCCTTCACGCTACCGGCCTGCGTCTCCAAGGCGCAGTCCATCGTCGACGCCGTCGCCGACCTCA
ACTCCTCGTCGTCGGAGAGCCGCACCTGCGAGCCCGATCGGAGCGTCGACGACAAGGCCTCCGTCAACGCGGCGGCCGGC
GGGGACGACCTGGACGCGCCGAGCGTGCACAGGTACGTGTCGGTGCGCGACATCCGTGGCCGCGGGGAGATGGAGCTGCA
GGAGTCCGCGGGGAGCAACAGCCTCTCCGGCAACCTGTGGACGCCGTCGTGCGAGTCCACGGACCGGACGTGGAGCGGCT
CGCGGTCGTCGAACAACGGCGACGAGGTCGTCGAGCAGGTCCCTAGCCACCACGGTGGCGCGCGCAGCCCGGTGAACCGG
CCCAGGCAGAGCAAGCAGAGGGCGGCGGCGCAGCTGGAGCCCAGCGGCCGGTCGCGCGCCGGCAGCTCCGGCGTCAATGC
TCACCGTGGACGCAGCGCTCACCGCGGCAGCGGCAGCGTGGTGAGCGGCCGATCGGGCGTCCGTGGCGTCTCGGCGAGCT
CGTAGTGAGGGAGATCAGGCAAGATGTATGAGATGGTAGTGTTGTTGCTAGCGGCAAGACGGATTGCTGCTTTCACGGTC
AGATCTGTAGTGTTTGTTTTTGTGTTGGGTTGTTTGGCGATGCAGTTCAGATATAGTCTTGCTAACGTTATCAATGTGGA
CC------TCATTAGAGTATTTAGGAGCAAACTTGTATCCTCTATTCAGGCGTAGACCTGTGGAAG--------------
------------------------------------------GTTTCTGATGCTTTGCTTTCGTTCCCATTGTGCAACAC
AAT--------------------------TTGGCATATACGTGTCCCAAAAGTTAGTGTACCAGCAGAAGCATCAGAAGA
TCGTCATTTTTACAGACTGTGCTGCTTCTCAGGTTAACACGGTGCCTTTGAGTAAACATTC-------------------
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-------------------------------------------------------TACAAAAAGTTCTACACACTAGTTC
ATTTTGTGGCAGTTAGCTAAAATCAGTGAA------CCCATCTGTAACTTGCACAC----------------TCACAAGA
GGAGCTTTTGGGATCGATATGTGCTTGGTGCAATCGAATAAAGAATGACAGTTCAGATGATATCTTACAAAGTACCATGG
ATAATTTGTCACCAAGCTTTCATAGCTCAGTTGGTTAGAGCACCCGTTTAGTAAGCGGGAGGTCTTGAGTTCAACTCTCA
ATGAAAGCAATTTTTGCATCTGTATTACATGGTTTTTCTCAGACGGATAATATAGCATTAAAACCTGCGCATTTTTTTTT
TGAG-TTGTCCGGAAGGCACAGGCTCCAAAATCGGTGG---------------------------------
>SNPs
SSSSSS-----------------------------------S---------SSSS-S--SS-SSSSS-------------
--------------------S-----------------------------------------------------------
-----------------------S------S---------S------S------S--S---S-S---S-SSS--------
---------------------------------------S----------S---------SS------------------
-----------------SSSSSSSSSSSSSSSSSS---------------------------------------------
--------------------------------------S-----------------------------------------
S----------------------------------------S--------------------------------------
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-----------------------------------------------------------------------S--------
---------------------------------------S----------------------------------------
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--------------------------------------------------------------------------S--S--
----------------------S----------------------------S------------------S---------
----------------------------------------------------------------S---------------
-----------------------------------------------------------------------S------S-
-----------------------------------------S--S----------------S--------S---------
-----------------------------------S------S-------------------------------------
---------------------S--------------------S-------S---S-----S-----S--S----------
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-------------S-----------------------------------------------S------------------
-----S--------------------------------------------------------------------------
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-----------------------------------------------------S--------------------------
--------------------------S--------------S---------------S------S---------------
-----------------------------------------S-------------------------------------S
---------------S-----------S--------S------------------------------S------------
------SS-------------------S-S--SS-SS--------------------------------------S-S--
--SSSSSS------------S-----------S------------------S-S---------S----S----S--SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------S------S-SS-SSSSSS-SSSS-SSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---SS--SS-SSS-SSSSS-SS--SS---------
----------------S-S--SSSSSSS-S-SSSSS-S-SSSSSSSS-SSSS-SSS--SS-SSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-----
------------------------------SSSSSS---------------S---SSSSSSSSSSSSSSSSS--------
------------S-----------------------------S-------SSSS----S--------S--SSS-------
-S----S----S-SS-----------------------------------------------------------------
------------S--SSSSSSS-SS----SS-S---SS------S-----------------------S-S----S-S--
-SS-S----S-----------S--S------SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_522
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----------------------GGGGAGGAGGAGAAGAAGGT--------------------------------------
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>reverse_2605
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--------------------------------------------AGCTGTCATGGTCACACGAG----------------
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