Multiple sequence alignment - TraesCS6B01G236200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G236200 chr6B 100.000 2478 0 0 1 2478 405061170 405058693 0.000000e+00 4577
1 TraesCS6B01G236200 chr6B 91.393 244 17 3 2066 2305 352091543 352091786 5.110000e-87 331
2 TraesCS6B01G236200 chr6D 91.003 1845 109 31 1 1818 263964066 263962252 0.000000e+00 2435
3 TraesCS6B01G236200 chr6D 90.055 181 11 4 1860 2038 263956979 263956804 6.890000e-56 228
4 TraesCS6B01G236200 chr6A 89.532 1901 133 33 1 1859 371328877 371330753 0.000000e+00 2348
5 TraesCS6B01G236200 chr6A 88.202 178 9 6 1860 2032 371330805 371330975 4.180000e-48 202
6 TraesCS6B01G236200 chr1B 91.770 243 15 4 2064 2302 589055663 589055904 1.420000e-87 333
7 TraesCS6B01G236200 chr1B 90.833 240 17 4 2067 2301 449552833 449553072 1.430000e-82 316
8 TraesCS6B01G236200 chr1B 90.164 244 18 5 2066 2306 635854162 635854402 1.850000e-81 313
9 TraesCS6B01G236200 chr3B 90.574 244 17 4 2064 2303 493121632 493121873 3.980000e-83 318
10 TraesCS6B01G236200 chr3B 89.712 243 20 4 2066 2305 519399320 519399080 3.100000e-79 305
11 TraesCS6B01G236200 chr4A 89.683 252 21 4 2058 2305 674523385 674523635 1.430000e-82 316
12 TraesCS6B01G236200 chr4D 90.000 240 21 2 2067 2303 331710046 331709807 8.610000e-80 307
13 TraesCS6B01G236200 chr4B 88.889 252 24 3 2055 2303 106786035 106786285 8.610000e-80 307
14 TraesCS6B01G236200 chr1A 96.875 64 0 2 933 995 285504124 285504186 3.370000e-19 106


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G236200 chr6B 405058693 405061170 2477 True 4577 4577 100.000 1 2478 1 chr6B.!!$R1 2477
1 TraesCS6B01G236200 chr6D 263962252 263964066 1814 True 2435 2435 91.003 1 1818 1 chr6D.!!$R2 1817
2 TraesCS6B01G236200 chr6A 371328877 371330975 2098 False 1275 2348 88.867 1 2032 2 chr6A.!!$F1 2031

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
261 262 0.807667 CTGCTGGCGCGAAGAACTAT 60.808 55.0 12.1 0.0 39.65 2.12 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 1871 0.03563 AGCTCACCTTCTCACCATGC 60.036 55.0 0.0 0.0 0.0 4.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 3.556513 GATTGTGGTACTAGAGCGATCG 58.443 50.000 11.69 11.69 0.00 3.69
129 130 1.910772 ACGTCTGCTGCTCCTCCTT 60.911 57.895 0.00 0.00 0.00 3.36
140 141 4.796231 CCTCCTTGTCGCCGGACG 62.796 72.222 5.05 9.12 46.49 4.79
164 165 0.903454 GACGAACCCCCTCCTTCTCA 60.903 60.000 0.00 0.00 0.00 3.27
178 179 2.043450 CTCAGAGGAGCCGACCCT 60.043 66.667 0.00 0.00 33.67 4.34
261 262 0.807667 CTGCTGGCGCGAAGAACTAT 60.808 55.000 12.10 0.00 39.65 2.12
267 268 2.000447 GGCGCGAAGAACTATGACTTT 59.000 47.619 12.10 0.00 0.00 2.66
323 324 3.326747 GAGTAGCCATAATGTAAGCGGG 58.673 50.000 0.00 0.00 0.00 6.13
328 329 1.271379 CCATAATGTAAGCGGGGAGGG 60.271 57.143 0.00 0.00 0.00 4.30
329 330 1.697432 CATAATGTAAGCGGGGAGGGA 59.303 52.381 0.00 0.00 0.00 4.20
333 334 3.087906 TAAGCGGGGAGGGAAGGC 61.088 66.667 0.00 0.00 0.00 4.35
339 340 2.686106 GGGAGGGAAGGCGGTGTA 60.686 66.667 0.00 0.00 0.00 2.90
372 373 4.733523 GCATTGGAACCGTGCTTAAATAGG 60.734 45.833 11.77 0.00 36.02 2.57
374 375 2.290387 TGGAACCGTGCTTAAATAGGCA 60.290 45.455 0.00 0.00 35.84 4.75
375 376 2.949644 GGAACCGTGCTTAAATAGGCAT 59.050 45.455 0.38 0.00 40.47 4.40
438 439 2.611518 CAGCCAAAGTAGACTTCTCGG 58.388 52.381 0.00 0.00 34.61 4.63
459 460 2.157834 TGCCACGTCGACATTAAAGT 57.842 45.000 17.16 0.58 0.00 2.66
462 463 2.409975 CCACGTCGACATTAAAGTGGT 58.590 47.619 22.50 5.69 42.83 4.16
466 467 3.054166 CGTCGACATTAAAGTGGTGTCA 58.946 45.455 17.16 0.00 41.69 3.58
486 487 4.675029 CGCCCGTCCGGTCTTGTT 62.675 66.667 0.00 0.00 0.00 2.83
489 490 2.280524 CCGTCCGGTCTTGTTGCA 60.281 61.111 0.00 0.00 0.00 4.08
599 600 3.460478 TTTTGGGGTGGGACCTGGC 62.460 63.158 0.00 0.00 38.64 4.85
654 657 5.200483 CCATGAAAGCTCCCCTAATTTGTA 58.800 41.667 0.00 0.00 0.00 2.41
676 679 2.884012 TCTTGCTTGCAGAATTTCGGAA 59.116 40.909 0.40 0.00 0.00 4.30
686 689 4.317769 GCAGAATTTCGGAAAAACCAAACG 60.318 41.667 7.33 0.00 38.90 3.60
691 694 1.256935 CGGAAAAACCAAACGCGTCG 61.257 55.000 14.44 6.98 38.90 5.12
800 815 1.011968 CGTTGAAAGATCGCACGGGA 61.012 55.000 0.00 0.00 33.46 5.14
833 848 3.400255 GCAAGGTCCCCGTATAGATTTC 58.600 50.000 0.00 0.00 0.00 2.17
837 852 1.627329 GTCCCCGTATAGATTTCCCCC 59.373 57.143 0.00 0.00 0.00 5.40
914 929 3.335484 TCTTTATAAGCACCAACCCCCTT 59.665 43.478 0.00 0.00 0.00 3.95
1020 1035 3.123620 GCTGGCCTGAGCGTTCTG 61.124 66.667 14.77 0.00 41.24 3.02
1091 1106 0.988678 ACCCTCCATAGCCCCAAGAC 60.989 60.000 0.00 0.00 0.00 3.01
1099 1114 0.617820 TAGCCCCAAGACCTCCTCAC 60.618 60.000 0.00 0.00 0.00 3.51
1252 1280 5.936686 GCTGCATCAAGAAGCTATAATCA 57.063 39.130 0.00 0.00 46.23 2.57
1260 1288 7.019774 TCAAGAAGCTATAATCAATGCACAC 57.980 36.000 0.00 0.00 0.00 3.82
1268 1296 2.425143 ATCAATGCACACCCGATCTT 57.575 45.000 0.00 0.00 0.00 2.40
1281 1309 3.244422 ACCCGATCTTGCTAGTTTGTTCA 60.244 43.478 0.00 0.00 0.00 3.18
1287 1315 7.246311 CGATCTTGCTAGTTTGTTCATTCATT 58.754 34.615 0.00 0.00 0.00 2.57
1288 1316 7.427606 CGATCTTGCTAGTTTGTTCATTCATTC 59.572 37.037 0.00 0.00 0.00 2.67
1289 1317 7.509141 TCTTGCTAGTTTGTTCATTCATTCA 57.491 32.000 0.00 0.00 0.00 2.57
1290 1318 8.114331 TCTTGCTAGTTTGTTCATTCATTCAT 57.886 30.769 0.00 0.00 0.00 2.57
1291 1319 9.230122 TCTTGCTAGTTTGTTCATTCATTCATA 57.770 29.630 0.00 0.00 0.00 2.15
1306 1334 9.032420 CATTCATTCATATCTGATGTAGATCCG 57.968 37.037 0.00 0.00 42.54 4.18
1312 1340 7.119387 TCATATCTGATGTAGATCCGTGGTAT 58.881 38.462 0.00 0.00 42.54 2.73
1481 1512 1.741145 TCAGCTTCGCGTACTGATGTA 59.259 47.619 19.31 3.57 35.58 2.29
1487 1518 2.631267 TCGCGTACTGATGTACTACCA 58.369 47.619 5.77 0.00 44.97 3.25
1489 1520 2.540361 CGCGTACTGATGTACTACCACC 60.540 54.545 0.00 0.00 44.97 4.61
1490 1521 2.424601 GCGTACTGATGTACTACCACCA 59.575 50.000 0.00 0.00 44.97 4.17
1491 1522 3.119388 GCGTACTGATGTACTACCACCAA 60.119 47.826 0.00 0.00 44.97 3.67
1492 1523 4.418392 CGTACTGATGTACTACCACCAAC 58.582 47.826 0.00 0.00 44.97 3.77
1493 1524 4.082625 CGTACTGATGTACTACCACCAACA 60.083 45.833 0.00 0.00 44.97 3.33
1494 1525 4.267349 ACTGATGTACTACCACCAACAC 57.733 45.455 0.00 0.00 0.00 3.32
1495 1526 3.250744 CTGATGTACTACCACCAACACG 58.749 50.000 0.00 0.00 0.00 4.49
1514 1545 1.358759 CAACACCAAGCAACCGGAC 59.641 57.895 9.46 0.00 0.00 4.79
1544 1581 2.186681 CGTAACGTACGTGTGCAAAG 57.813 50.000 23.57 5.83 46.41 2.77
1562 1599 6.609237 GCAAAGGCAAGAAGAAAAGAAAAT 57.391 33.333 0.00 0.00 40.72 1.82
1650 1690 4.487412 CGGGGAGCGTACGTGTCC 62.487 72.222 23.29 23.29 0.00 4.02
1652 1692 4.487412 GGGAGCGTACGTGTCCCG 62.487 72.222 30.27 2.54 40.76 5.14
1683 1723 4.996976 CGGATAAGATGGCCGGAG 57.003 61.111 5.05 0.00 41.29 4.63
1700 1740 3.650950 GAGCTGGCCCCACCTGAA 61.651 66.667 0.00 0.00 39.72 3.02
1728 1768 5.614324 TCAGGATCCAATAAACTGACGAT 57.386 39.130 15.82 0.00 33.62 3.73
1731 1771 5.696724 CAGGATCCAATAAACTGACGATACC 59.303 44.000 15.82 0.00 0.00 2.73
1774 1814 6.679327 TTATATCATATCACGTCTCTCCCG 57.321 41.667 0.00 0.00 0.00 5.14
1777 1817 1.267261 CATATCACGTCTCTCCCGTCC 59.733 57.143 0.00 0.00 36.17 4.79
1778 1818 0.465097 TATCACGTCTCTCCCGTCCC 60.465 60.000 0.00 0.00 36.17 4.46
1779 1819 3.812019 CACGTCTCTCCCGTCCCG 61.812 72.222 0.00 0.00 36.17 5.14
1780 1820 4.341783 ACGTCTCTCCCGTCCCGT 62.342 66.667 0.00 0.00 31.97 5.28
1781 1821 3.507009 CGTCTCTCCCGTCCCGTC 61.507 72.222 0.00 0.00 0.00 4.79
1804 1844 0.107654 GTGGGGATTAGCTTCTGCGT 60.108 55.000 0.00 0.00 45.42 5.24
1822 1862 5.048294 TCTGCGTGAAGATCAACTACAACTA 60.048 40.000 0.00 0.00 0.00 2.24
1839 1882 8.100791 ACTACAACTAATTAAGCATGGTGAGAA 58.899 33.333 0.00 0.00 0.00 2.87
1841 1884 6.375455 ACAACTAATTAAGCATGGTGAGAAGG 59.625 38.462 0.00 0.00 0.00 3.46
1865 1959 1.824224 CTGACTGAGGCAGTGAGGCA 61.824 60.000 7.27 0.00 45.44 4.75
1907 2004 3.873952 GAGTACAAGGATGGAGTGATTGC 59.126 47.826 0.00 0.00 0.00 3.56
1936 2035 4.666253 ACATGCCTGGCGCCTTGT 62.666 61.111 29.70 19.00 36.24 3.16
1974 2073 1.001974 CTGGGTGTAACAGTGCTAGCA 59.998 52.381 14.93 14.93 39.98 3.49
1975 2074 1.418264 TGGGTGTAACAGTGCTAGCAA 59.582 47.619 21.29 0.00 39.98 3.91
1978 2077 2.417719 GTGTAACAGTGCTAGCAAGCT 58.582 47.619 21.29 10.80 43.17 3.74
1979 2078 3.585862 GTGTAACAGTGCTAGCAAGCTA 58.414 45.455 21.29 8.17 43.17 3.32
1981 2080 4.268884 GTGTAACAGTGCTAGCAAGCTATC 59.731 45.833 21.29 5.75 43.17 2.08
1983 2082 7.558724 GTGTAACAGTGCTAGCAAGCTATCAA 61.559 42.308 21.29 0.00 43.17 2.57
1984 2083 9.455507 GTGTAACAGTGCTAGCAAGCTATCAAC 62.456 44.444 21.29 10.76 43.17 3.18
1988 2087 2.911484 GCTAGCAAGCTATCAACTGGT 58.089 47.619 10.63 0.00 45.85 4.00
1989 2088 2.611292 GCTAGCAAGCTATCAACTGGTG 59.389 50.000 10.63 0.00 45.85 4.17
1990 2089 2.867109 AGCAAGCTATCAACTGGTGT 57.133 45.000 0.00 0.00 0.00 4.16
1991 2090 3.981071 AGCAAGCTATCAACTGGTGTA 57.019 42.857 0.00 0.00 0.00 2.90
1992 2091 3.600388 AGCAAGCTATCAACTGGTGTAC 58.400 45.455 0.00 0.00 0.00 2.90
1996 2095 6.323996 AGCAAGCTATCAACTGGTGTACTATA 59.676 38.462 0.00 0.00 0.00 1.31
2006 2105 8.158132 TCAACTGGTGTACTATATGGTTTGAAA 58.842 33.333 0.00 0.00 0.00 2.69
2013 2112 9.005777 GTGTACTATATGGTTTGAAACTTTGGA 57.994 33.333 8.09 0.00 0.00 3.53
2014 2113 9.747898 TGTACTATATGGTTTGAAACTTTGGAT 57.252 29.630 8.09 0.00 0.00 3.41
2032 2131 9.353999 ACTTTGGATAATAAGAATTTTGCGTTC 57.646 29.630 0.00 0.00 0.00 3.95
2033 2132 9.352784 CTTTGGATAATAAGAATTTTGCGTTCA 57.647 29.630 0.00 0.00 0.00 3.18
2034 2133 9.698309 TTTGGATAATAAGAATTTTGCGTTCAA 57.302 25.926 0.00 0.00 0.00 2.69
2035 2134 9.698309 TTGGATAATAAGAATTTTGCGTTCAAA 57.302 25.926 0.00 0.00 40.17 2.69
2046 2145 6.820470 TTTTGCGTTCAAAATTCCTTGTAG 57.180 33.333 0.00 0.00 44.58 2.74
2047 2146 5.759506 TTGCGTTCAAAATTCCTTGTAGA 57.240 34.783 0.00 0.00 0.00 2.59
2048 2147 5.759506 TGCGTTCAAAATTCCTTGTAGAA 57.240 34.783 0.00 0.00 0.00 2.10
2049 2148 6.137794 TGCGTTCAAAATTCCTTGTAGAAA 57.862 33.333 0.00 0.00 0.00 2.52
2050 2149 6.205784 TGCGTTCAAAATTCCTTGTAGAAAG 58.794 36.000 0.00 0.00 0.00 2.62
2051 2150 6.038825 TGCGTTCAAAATTCCTTGTAGAAAGA 59.961 34.615 0.00 0.00 0.00 2.52
2052 2151 6.915843 GCGTTCAAAATTCCTTGTAGAAAGAA 59.084 34.615 0.00 0.00 0.00 2.52
2053 2152 7.113544 GCGTTCAAAATTCCTTGTAGAAAGAAG 59.886 37.037 0.00 0.00 0.00 2.85
2054 2153 8.342634 CGTTCAAAATTCCTTGTAGAAAGAAGA 58.657 33.333 0.00 0.00 0.00 2.87
2069 2168 9.486857 GTAGAAAGAAGAATTTAACATTACGGC 57.513 33.333 0.00 0.00 0.00 5.68
2070 2169 8.106247 AGAAAGAAGAATTTAACATTACGGCA 57.894 30.769 0.00 0.00 0.00 5.69
2071 2170 8.573035 AGAAAGAAGAATTTAACATTACGGCAA 58.427 29.630 0.00 0.00 0.00 4.52
2072 2171 9.353999 GAAAGAAGAATTTAACATTACGGCAAT 57.646 29.630 0.00 0.00 0.00 3.56
2074 2173 8.050778 AGAAGAATTTAACATTACGGCAATGA 57.949 30.769 16.21 0.00 45.99 2.57
2075 2174 8.686334 AGAAGAATTTAACATTACGGCAATGAT 58.314 29.630 16.21 8.85 45.99 2.45
2076 2175 9.944663 GAAGAATTTAACATTACGGCAATGATA 57.055 29.630 16.21 8.02 45.99 2.15
2082 2181 5.705609 ACATTACGGCAATGATAAATCCC 57.294 39.130 16.21 0.00 45.99 3.85
2083 2182 4.215399 ACATTACGGCAATGATAAATCCCG 59.785 41.667 16.21 0.00 45.99 5.14
2084 2183 2.631160 ACGGCAATGATAAATCCCGA 57.369 45.000 10.93 0.00 39.04 5.14
2085 2184 2.925724 ACGGCAATGATAAATCCCGAA 58.074 42.857 10.93 0.00 39.04 4.30
2086 2185 2.616842 ACGGCAATGATAAATCCCGAAC 59.383 45.455 10.93 0.00 39.04 3.95
2087 2186 2.349438 CGGCAATGATAAATCCCGAACG 60.349 50.000 0.00 0.00 38.04 3.95
2088 2187 2.616842 GGCAATGATAAATCCCGAACGT 59.383 45.455 0.00 0.00 0.00 3.99
2089 2188 3.066203 GGCAATGATAAATCCCGAACGTT 59.934 43.478 0.00 0.00 0.00 3.99
2090 2189 4.279659 GCAATGATAAATCCCGAACGTTC 58.720 43.478 18.47 18.47 0.00 3.95
2102 2201 3.443054 CGAACGTTCGGATTTTAAGCA 57.557 42.857 36.53 0.00 46.30 3.91
2103 2202 3.998522 CGAACGTTCGGATTTTAAGCAT 58.001 40.909 36.53 0.00 46.30 3.79
2104 2203 3.778718 CGAACGTTCGGATTTTAAGCATG 59.221 43.478 36.53 8.97 46.30 4.06
2105 2204 3.757745 ACGTTCGGATTTTAAGCATGG 57.242 42.857 0.00 0.00 0.00 3.66
2106 2205 3.078837 ACGTTCGGATTTTAAGCATGGT 58.921 40.909 0.00 0.00 0.00 3.55
2107 2206 4.255301 ACGTTCGGATTTTAAGCATGGTA 58.745 39.130 0.00 0.00 0.00 3.25
2108 2207 4.696402 ACGTTCGGATTTTAAGCATGGTAA 59.304 37.500 0.00 0.00 0.00 2.85
2109 2208 5.025826 CGTTCGGATTTTAAGCATGGTAAC 58.974 41.667 0.00 0.00 0.00 2.50
2110 2209 5.337554 GTTCGGATTTTAAGCATGGTAACC 58.662 41.667 0.00 0.00 0.00 2.85
2111 2210 4.850680 TCGGATTTTAAGCATGGTAACCT 58.149 39.130 0.00 0.00 0.00 3.50
2112 2211 4.638421 TCGGATTTTAAGCATGGTAACCTG 59.362 41.667 0.00 0.00 35.00 4.00
2113 2212 4.638421 CGGATTTTAAGCATGGTAACCTGA 59.362 41.667 0.00 0.00 33.48 3.86
2114 2213 5.124776 CGGATTTTAAGCATGGTAACCTGAA 59.875 40.000 0.00 0.00 33.48 3.02
2115 2214 6.330278 GGATTTTAAGCATGGTAACCTGAAC 58.670 40.000 0.00 0.00 33.48 3.18
2116 2215 6.152831 GGATTTTAAGCATGGTAACCTGAACT 59.847 38.462 0.00 0.00 33.48 3.01
2117 2216 6.969993 TTTTAAGCATGGTAACCTGAACTT 57.030 33.333 0.00 0.00 33.48 2.66
2118 2217 6.969993 TTTAAGCATGGTAACCTGAACTTT 57.030 33.333 0.00 0.00 33.48 2.66
2119 2218 6.969993 TTAAGCATGGTAACCTGAACTTTT 57.030 33.333 0.00 0.00 33.48 2.27
2120 2219 5.869649 AAGCATGGTAACCTGAACTTTTT 57.130 34.783 0.00 0.00 33.48 1.94
2140 2239 5.365403 TTTTATGGCAACTTTAGGTCACG 57.635 39.130 0.00 0.00 37.61 4.35
2141 2240 2.561478 ATGGCAACTTTAGGTCACGT 57.439 45.000 0.00 0.00 37.61 4.49
2142 2241 1.588674 TGGCAACTTTAGGTCACGTG 58.411 50.000 9.94 9.94 37.61 4.49
2143 2242 1.139256 TGGCAACTTTAGGTCACGTGA 59.861 47.619 15.76 15.76 37.61 4.35
2144 2243 1.798813 GGCAACTTTAGGTCACGTGAG 59.201 52.381 20.73 8.68 0.00 3.51
2145 2244 1.798813 GCAACTTTAGGTCACGTGAGG 59.201 52.381 20.73 7.65 0.00 3.86
2146 2245 2.805657 GCAACTTTAGGTCACGTGAGGT 60.806 50.000 20.73 11.72 0.00 3.85
2147 2246 3.463944 CAACTTTAGGTCACGTGAGGTT 58.536 45.455 20.73 13.44 0.00 3.50
2148 2247 3.107642 ACTTTAGGTCACGTGAGGTTG 57.892 47.619 20.73 9.78 0.00 3.77
2149 2248 2.224209 ACTTTAGGTCACGTGAGGTTGG 60.224 50.000 20.73 10.29 0.00 3.77
2150 2249 1.416243 TTAGGTCACGTGAGGTTGGT 58.584 50.000 20.73 2.57 0.00 3.67
2151 2250 2.291209 TAGGTCACGTGAGGTTGGTA 57.709 50.000 20.73 1.57 0.00 3.25
2152 2251 1.416243 AGGTCACGTGAGGTTGGTAA 58.584 50.000 20.73 0.00 0.00 2.85
2153 2252 1.764134 AGGTCACGTGAGGTTGGTAAA 59.236 47.619 20.73 0.00 0.00 2.01
2154 2253 1.869132 GGTCACGTGAGGTTGGTAAAC 59.131 52.381 20.73 3.12 35.40 2.01
2155 2254 2.553086 GTCACGTGAGGTTGGTAAACA 58.447 47.619 20.73 0.00 38.10 2.83
2156 2255 3.135994 GTCACGTGAGGTTGGTAAACAT 58.864 45.455 20.73 0.00 38.10 2.71
2157 2256 3.562557 GTCACGTGAGGTTGGTAAACATT 59.437 43.478 20.73 0.00 38.10 2.71
2158 2257 3.562141 TCACGTGAGGTTGGTAAACATTG 59.438 43.478 15.76 0.00 38.10 2.82
2159 2258 2.882137 ACGTGAGGTTGGTAAACATTGG 59.118 45.455 0.00 0.00 38.10 3.16
2160 2259 3.142951 CGTGAGGTTGGTAAACATTGGA 58.857 45.455 0.00 0.00 38.10 3.53
2161 2260 3.566322 CGTGAGGTTGGTAAACATTGGAA 59.434 43.478 0.00 0.00 38.10 3.53
2162 2261 4.217550 CGTGAGGTTGGTAAACATTGGAAT 59.782 41.667 0.00 0.00 38.10 3.01
2163 2262 5.278758 CGTGAGGTTGGTAAACATTGGAATT 60.279 40.000 0.00 0.00 38.10 2.17
2164 2263 6.521162 GTGAGGTTGGTAAACATTGGAATTT 58.479 36.000 0.00 0.00 38.10 1.82
2165 2264 6.989759 GTGAGGTTGGTAAACATTGGAATTTT 59.010 34.615 0.00 0.00 38.10 1.82
2166 2265 7.170828 GTGAGGTTGGTAAACATTGGAATTTTC 59.829 37.037 0.00 0.00 38.10 2.29
2167 2266 7.070571 TGAGGTTGGTAAACATTGGAATTTTCT 59.929 33.333 0.00 0.00 38.10 2.52
2168 2267 7.216494 AGGTTGGTAAACATTGGAATTTTCTG 58.784 34.615 0.00 0.00 38.10 3.02
2169 2268 6.426633 GGTTGGTAAACATTGGAATTTTCTGG 59.573 38.462 0.00 0.00 38.10 3.86
2170 2269 6.107901 TGGTAAACATTGGAATTTTCTGGG 57.892 37.500 0.00 0.00 0.00 4.45
2171 2270 5.841237 TGGTAAACATTGGAATTTTCTGGGA 59.159 36.000 0.00 0.00 0.00 4.37
2172 2271 6.327626 TGGTAAACATTGGAATTTTCTGGGAA 59.672 34.615 0.00 0.00 0.00 3.97
2173 2272 7.147479 TGGTAAACATTGGAATTTTCTGGGAAA 60.147 33.333 0.00 0.00 0.00 3.13
2174 2273 7.717436 GGTAAACATTGGAATTTTCTGGGAAAA 59.283 33.333 7.71 7.71 0.00 2.29
2175 2274 9.114952 GTAAACATTGGAATTTTCTGGGAAAAA 57.885 29.630 9.07 0.00 32.99 1.94
2196 2295 6.421377 AAAAATGAACTGGAACAAAGTTGC 57.579 33.333 0.00 0.00 37.98 4.17
2197 2296 3.733443 ATGAACTGGAACAAAGTTGCC 57.267 42.857 0.00 0.00 37.98 4.52
2198 2297 2.451490 TGAACTGGAACAAAGTTGCCA 58.549 42.857 0.00 0.00 37.98 4.92
2199 2298 3.030291 TGAACTGGAACAAAGTTGCCAT 58.970 40.909 0.00 0.00 37.98 4.40
2200 2299 3.181477 TGAACTGGAACAAAGTTGCCATG 60.181 43.478 0.00 0.00 37.98 3.66
2201 2300 2.387757 ACTGGAACAAAGTTGCCATGT 58.612 42.857 0.00 0.00 38.70 3.21
2202 2301 2.362077 ACTGGAACAAAGTTGCCATGTC 59.638 45.455 0.00 0.00 38.70 3.06
2203 2302 2.624838 CTGGAACAAAGTTGCCATGTCT 59.375 45.455 0.00 0.00 38.70 3.41
2204 2303 3.030291 TGGAACAAAGTTGCCATGTCTT 58.970 40.909 0.00 0.00 31.92 3.01
2205 2304 4.211125 TGGAACAAAGTTGCCATGTCTTA 58.789 39.130 0.00 0.00 31.92 2.10
2206 2305 4.646945 TGGAACAAAGTTGCCATGTCTTAA 59.353 37.500 0.00 0.00 31.92 1.85
2207 2306 4.982295 GGAACAAAGTTGCCATGTCTTAAC 59.018 41.667 0.00 0.00 0.00 2.01
2208 2307 5.451242 GGAACAAAGTTGCCATGTCTTAACA 60.451 40.000 0.00 0.00 40.38 2.41
2209 2308 5.590530 ACAAAGTTGCCATGTCTTAACAA 57.409 34.783 0.00 0.00 39.30 2.83
2210 2309 5.348164 ACAAAGTTGCCATGTCTTAACAAC 58.652 37.500 0.00 0.00 39.30 3.32
2214 2313 6.952773 AGTTGCCATGTCTTAACAACTAAA 57.047 33.333 4.97 0.00 46.66 1.85
2215 2314 7.341445 AGTTGCCATGTCTTAACAACTAAAA 57.659 32.000 4.97 0.00 46.66 1.52
2216 2315 7.951591 AGTTGCCATGTCTTAACAACTAAAAT 58.048 30.769 4.97 0.00 46.66 1.82
2217 2316 8.421002 AGTTGCCATGTCTTAACAACTAAAATT 58.579 29.630 4.97 0.00 46.66 1.82
2218 2317 8.487176 GTTGCCATGTCTTAACAACTAAAATTG 58.513 33.333 0.00 0.00 39.30 2.32
2219 2318 6.644592 TGCCATGTCTTAACAACTAAAATTGC 59.355 34.615 0.00 0.00 39.30 3.56
2220 2319 6.090763 GCCATGTCTTAACAACTAAAATTGCC 59.909 38.462 0.00 0.00 39.30 4.52
2221 2320 7.151308 CCATGTCTTAACAACTAAAATTGCCA 58.849 34.615 0.00 0.00 39.30 4.92
2222 2321 7.116233 CCATGTCTTAACAACTAAAATTGCCAC 59.884 37.037 0.00 0.00 39.30 5.01
2223 2322 6.508777 TGTCTTAACAACTAAAATTGCCACC 58.491 36.000 0.00 0.00 32.47 4.61
2224 2323 6.322712 TGTCTTAACAACTAAAATTGCCACCT 59.677 34.615 0.00 0.00 32.47 4.00
2225 2324 6.861572 GTCTTAACAACTAAAATTGCCACCTC 59.138 38.462 0.00 0.00 32.47 3.85
2226 2325 3.915437 ACAACTAAAATTGCCACCTCG 57.085 42.857 0.00 0.00 32.47 4.63
2227 2326 2.030274 ACAACTAAAATTGCCACCTCGC 60.030 45.455 0.00 0.00 32.47 5.03
2228 2327 0.802494 ACTAAAATTGCCACCTCGCG 59.198 50.000 0.00 0.00 0.00 5.87
2229 2328 0.802494 CTAAAATTGCCACCTCGCGT 59.198 50.000 5.77 0.00 0.00 6.01
2230 2329 0.800012 TAAAATTGCCACCTCGCGTC 59.200 50.000 5.77 0.00 0.00 5.19
2231 2330 1.169661 AAAATTGCCACCTCGCGTCA 61.170 50.000 5.77 0.00 0.00 4.35
2232 2331 1.169661 AAATTGCCACCTCGCGTCAA 61.170 50.000 5.77 2.77 0.00 3.18
2233 2332 0.960364 AATTGCCACCTCGCGTCAAT 60.960 50.000 5.77 5.00 0.00 2.57
2234 2333 0.960364 ATTGCCACCTCGCGTCAATT 60.960 50.000 5.77 0.00 0.00 2.32
2235 2334 0.320858 TTGCCACCTCGCGTCAATTA 60.321 50.000 5.77 0.00 0.00 1.40
2236 2335 0.320858 TGCCACCTCGCGTCAATTAA 60.321 50.000 5.77 0.00 0.00 1.40
2237 2336 0.800012 GCCACCTCGCGTCAATTAAA 59.200 50.000 5.77 0.00 0.00 1.52
2238 2337 1.202031 GCCACCTCGCGTCAATTAAAG 60.202 52.381 5.77 0.00 0.00 1.85
2239 2338 2.073816 CCACCTCGCGTCAATTAAAGT 58.926 47.619 5.77 0.00 0.00 2.66
2240 2339 2.482721 CCACCTCGCGTCAATTAAAGTT 59.517 45.455 5.77 0.00 0.00 2.66
2241 2340 3.479006 CACCTCGCGTCAATTAAAGTTG 58.521 45.455 5.77 0.00 0.00 3.16
2242 2341 3.059188 CACCTCGCGTCAATTAAAGTTGT 60.059 43.478 5.77 0.00 0.00 3.32
2243 2342 3.185797 ACCTCGCGTCAATTAAAGTTGTC 59.814 43.478 5.77 0.00 0.00 3.18
2244 2343 3.185594 CCTCGCGTCAATTAAAGTTGTCA 59.814 43.478 5.77 0.00 0.00 3.58
2245 2344 4.142902 CCTCGCGTCAATTAAAGTTGTCAT 60.143 41.667 5.77 0.00 0.00 3.06
2246 2345 4.707563 TCGCGTCAATTAAAGTTGTCATG 58.292 39.130 5.77 0.00 0.00 3.07
2247 2346 4.212425 TCGCGTCAATTAAAGTTGTCATGT 59.788 37.500 5.77 0.00 0.00 3.21
2248 2347 5.405873 TCGCGTCAATTAAAGTTGTCATGTA 59.594 36.000 5.77 0.00 0.00 2.29
2249 2348 6.073711 TCGCGTCAATTAAAGTTGTCATGTAA 60.074 34.615 5.77 0.00 0.00 2.41
2250 2349 6.575572 CGCGTCAATTAAAGTTGTCATGTAAA 59.424 34.615 0.00 0.00 0.00 2.01
2251 2350 7.112287 CGCGTCAATTAAAGTTGTCATGTAAAA 59.888 33.333 0.00 0.00 0.00 1.52
2252 2351 8.747666 GCGTCAATTAAAGTTGTCATGTAAAAA 58.252 29.630 0.00 0.00 0.00 1.94
2255 2354 9.790389 TCAATTAAAGTTGTCATGTAAAAACGT 57.210 25.926 0.00 0.00 0.00 3.99
2258 2357 6.784068 AAAGTTGTCATGTAAAAACGTTCG 57.216 33.333 0.00 0.00 0.00 3.95
2259 2358 4.839796 AGTTGTCATGTAAAAACGTTCGG 58.160 39.130 0.00 0.00 0.00 4.30
2260 2359 3.881780 TGTCATGTAAAAACGTTCGGG 57.118 42.857 0.00 0.00 0.00 5.14
2261 2360 3.464907 TGTCATGTAAAAACGTTCGGGA 58.535 40.909 0.00 0.00 0.00 5.14
2262 2361 4.066490 TGTCATGTAAAAACGTTCGGGAT 58.934 39.130 0.00 0.00 0.00 3.85
2263 2362 4.083749 TGTCATGTAAAAACGTTCGGGATG 60.084 41.667 0.00 1.28 0.00 3.51
2264 2363 4.152759 GTCATGTAAAAACGTTCGGGATGA 59.847 41.667 0.00 3.72 0.00 2.92
2265 2364 4.755629 TCATGTAAAAACGTTCGGGATGAA 59.244 37.500 0.00 0.00 0.00 2.57
2266 2365 5.238868 TCATGTAAAAACGTTCGGGATGAAA 59.761 36.000 0.00 0.00 38.60 2.69
2267 2366 5.692613 TGTAAAAACGTTCGGGATGAAAT 57.307 34.783 0.00 0.00 38.60 2.17
2268 2367 5.453648 TGTAAAAACGTTCGGGATGAAATG 58.546 37.500 0.00 0.00 38.60 2.32
2269 2368 2.629639 AAACGTTCGGGATGAAATGC 57.370 45.000 0.00 0.00 38.60 3.56
2270 2369 1.821216 AACGTTCGGGATGAAATGCT 58.179 45.000 0.00 0.00 38.60 3.79
2271 2370 1.821216 ACGTTCGGGATGAAATGCTT 58.179 45.000 0.00 0.00 38.60 3.91
2272 2371 2.980568 ACGTTCGGGATGAAATGCTTA 58.019 42.857 0.00 0.00 38.60 3.09
2273 2372 3.340034 ACGTTCGGGATGAAATGCTTAA 58.660 40.909 0.00 0.00 38.60 1.85
2274 2373 3.945285 ACGTTCGGGATGAAATGCTTAAT 59.055 39.130 0.00 0.00 38.60 1.40
2275 2374 4.035208 ACGTTCGGGATGAAATGCTTAATC 59.965 41.667 0.00 0.00 38.60 1.75
2276 2375 4.554723 CGTTCGGGATGAAATGCTTAATCC 60.555 45.833 0.00 0.00 38.60 3.01
2277 2376 3.138304 TCGGGATGAAATGCTTAATCCG 58.862 45.455 0.00 0.00 39.66 4.18
2278 2377 3.138304 CGGGATGAAATGCTTAATCCGA 58.862 45.455 0.00 0.00 39.66 4.55
2279 2378 3.563808 CGGGATGAAATGCTTAATCCGAA 59.436 43.478 0.00 0.00 39.66 4.30
2280 2379 4.554723 CGGGATGAAATGCTTAATCCGAAC 60.555 45.833 0.00 0.00 39.66 3.95
2281 2380 4.338118 GGGATGAAATGCTTAATCCGAACA 59.662 41.667 0.00 0.00 39.66 3.18
2282 2381 5.010012 GGGATGAAATGCTTAATCCGAACAT 59.990 40.000 0.00 0.00 39.66 2.71
2283 2382 6.461509 GGGATGAAATGCTTAATCCGAACATT 60.462 38.462 0.00 0.00 39.66 2.71
2284 2383 6.980397 GGATGAAATGCTTAATCCGAACATTT 59.020 34.615 0.00 0.00 42.09 2.32
2285 2384 8.134895 GGATGAAATGCTTAATCCGAACATTTA 58.865 33.333 0.00 0.00 40.13 1.40
2286 2385 9.173939 GATGAAATGCTTAATCCGAACATTTAG 57.826 33.333 0.00 0.00 40.13 1.85
2287 2386 8.275015 TGAAATGCTTAATCCGAACATTTAGA 57.725 30.769 0.00 0.00 40.13 2.10
2288 2387 8.902806 TGAAATGCTTAATCCGAACATTTAGAT 58.097 29.630 0.00 0.00 40.13 1.98
2289 2388 9.736023 GAAATGCTTAATCCGAACATTTAGATT 57.264 29.630 0.00 0.00 40.13 2.40
2297 2396 6.854496 TCCGAACATTTAGATTTTATCGGG 57.146 37.500 10.54 0.00 46.31 5.14
2298 2397 5.761234 TCCGAACATTTAGATTTTATCGGGG 59.239 40.000 10.54 0.00 46.31 5.73
2299 2398 5.529800 CCGAACATTTAGATTTTATCGGGGT 59.470 40.000 0.00 0.00 43.52 4.95
2300 2399 6.293244 CCGAACATTTAGATTTTATCGGGGTC 60.293 42.308 0.00 0.00 43.52 4.46
2301 2400 6.293244 CGAACATTTAGATTTTATCGGGGTCC 60.293 42.308 0.00 0.00 0.00 4.46
2302 2401 6.262056 ACATTTAGATTTTATCGGGGTCCT 57.738 37.500 0.00 0.00 0.00 3.85
2303 2402 7.383156 ACATTTAGATTTTATCGGGGTCCTA 57.617 36.000 0.00 0.00 0.00 2.94
2304 2403 7.808218 ACATTTAGATTTTATCGGGGTCCTAA 58.192 34.615 0.00 0.00 0.00 2.69
2305 2404 7.718314 ACATTTAGATTTTATCGGGGTCCTAAC 59.282 37.037 0.00 0.00 0.00 2.34
2306 2405 6.811634 TTAGATTTTATCGGGGTCCTAACA 57.188 37.500 0.00 0.00 0.00 2.41
2307 2406 5.906772 AGATTTTATCGGGGTCCTAACAT 57.093 39.130 0.00 0.00 0.00 2.71
2308 2407 6.262056 AGATTTTATCGGGGTCCTAACATT 57.738 37.500 0.00 0.00 0.00 2.71
2309 2408 7.383156 AGATTTTATCGGGGTCCTAACATTA 57.617 36.000 0.00 0.00 0.00 1.90
2310 2409 7.808218 AGATTTTATCGGGGTCCTAACATTAA 58.192 34.615 0.00 0.00 0.00 1.40
2311 2410 8.445588 AGATTTTATCGGGGTCCTAACATTAAT 58.554 33.333 0.00 0.00 0.00 1.40
2312 2411 9.729281 GATTTTATCGGGGTCCTAACATTAATA 57.271 33.333 0.00 0.00 0.00 0.98
2313 2412 9.734984 ATTTTATCGGGGTCCTAACATTAATAG 57.265 33.333 0.00 0.00 0.00 1.73
2314 2413 7.860649 TTATCGGGGTCCTAACATTAATAGT 57.139 36.000 0.00 0.00 0.00 2.12
2315 2414 5.540400 TCGGGGTCCTAACATTAATAGTG 57.460 43.478 0.00 0.00 0.00 2.74
2316 2415 4.345837 TCGGGGTCCTAACATTAATAGTGG 59.654 45.833 0.00 0.00 0.00 4.00
2317 2416 4.395625 GGGGTCCTAACATTAATAGTGGC 58.604 47.826 0.00 0.00 0.00 5.01
2318 2417 4.141344 GGGGTCCTAACATTAATAGTGGCA 60.141 45.833 0.00 0.00 0.00 4.92
2319 2418 4.820173 GGGTCCTAACATTAATAGTGGCAC 59.180 45.833 10.29 10.29 0.00 5.01
2320 2419 5.397559 GGGTCCTAACATTAATAGTGGCACT 60.398 44.000 25.34 25.34 0.00 4.40
2321 2420 5.758784 GGTCCTAACATTAATAGTGGCACTC 59.241 44.000 25.80 3.95 0.00 3.51
2322 2421 5.758784 GTCCTAACATTAATAGTGGCACTCC 59.241 44.000 25.80 0.00 0.00 3.85
2323 2422 5.063880 CCTAACATTAATAGTGGCACTCCC 58.936 45.833 25.80 0.00 0.00 4.30
2324 2423 4.862641 AACATTAATAGTGGCACTCCCT 57.137 40.909 25.80 12.11 0.00 4.20
2325 2424 4.423625 ACATTAATAGTGGCACTCCCTC 57.576 45.455 25.80 0.00 0.00 4.30
2326 2425 4.040755 ACATTAATAGTGGCACTCCCTCT 58.959 43.478 25.80 7.69 40.43 3.69
2327 2426 4.101741 ACATTAATAGTGGCACTCCCTCTC 59.898 45.833 25.80 0.00 38.37 3.20
2328 2427 2.559381 AATAGTGGCACTCCCTCTCT 57.441 50.000 25.80 0.00 38.37 3.10
2329 2428 2.559381 ATAGTGGCACTCCCTCTCTT 57.441 50.000 25.80 0.00 38.37 2.85
2330 2429 2.327325 TAGTGGCACTCCCTCTCTTT 57.673 50.000 25.80 0.00 38.37 2.52
2331 2430 0.980423 AGTGGCACTCCCTCTCTTTC 59.020 55.000 15.88 0.00 31.94 2.62
2332 2431 0.390472 GTGGCACTCCCTCTCTTTCG 60.390 60.000 11.13 0.00 0.00 3.46
2333 2432 0.832135 TGGCACTCCCTCTCTTTCGT 60.832 55.000 0.00 0.00 0.00 3.85
2334 2433 0.390472 GGCACTCCCTCTCTTTCGTG 60.390 60.000 0.00 0.00 0.00 4.35
2335 2434 0.318762 GCACTCCCTCTCTTTCGTGT 59.681 55.000 0.00 0.00 0.00 4.49
2336 2435 1.937108 GCACTCCCTCTCTTTCGTGTG 60.937 57.143 0.00 0.00 0.00 3.82
2337 2436 1.341531 CACTCCCTCTCTTTCGTGTGT 59.658 52.381 0.00 0.00 0.00 3.72
2338 2437 2.040178 ACTCCCTCTCTTTCGTGTGTT 58.960 47.619 0.00 0.00 0.00 3.32
2339 2438 2.434702 ACTCCCTCTCTTTCGTGTGTTT 59.565 45.455 0.00 0.00 0.00 2.83
2340 2439 3.640029 ACTCCCTCTCTTTCGTGTGTTTA 59.360 43.478 0.00 0.00 0.00 2.01
2341 2440 4.283722 ACTCCCTCTCTTTCGTGTGTTTAT 59.716 41.667 0.00 0.00 0.00 1.40
2342 2441 4.566004 TCCCTCTCTTTCGTGTGTTTATG 58.434 43.478 0.00 0.00 0.00 1.90
2343 2442 3.684788 CCCTCTCTTTCGTGTGTTTATGG 59.315 47.826 0.00 0.00 0.00 2.74
2344 2443 4.562757 CCCTCTCTTTCGTGTGTTTATGGA 60.563 45.833 0.00 0.00 0.00 3.41
2345 2444 4.627467 CCTCTCTTTCGTGTGTTTATGGAG 59.373 45.833 0.00 0.00 0.00 3.86
2346 2445 5.209818 TCTCTTTCGTGTGTTTATGGAGT 57.790 39.130 0.00 0.00 0.00 3.85
2347 2446 5.607477 TCTCTTTCGTGTGTTTATGGAGTT 58.393 37.500 0.00 0.00 0.00 3.01
2348 2447 6.053005 TCTCTTTCGTGTGTTTATGGAGTTT 58.947 36.000 0.00 0.00 0.00 2.66
2349 2448 6.540914 TCTCTTTCGTGTGTTTATGGAGTTTT 59.459 34.615 0.00 0.00 0.00 2.43
2350 2449 7.066525 TCTCTTTCGTGTGTTTATGGAGTTTTT 59.933 33.333 0.00 0.00 0.00 1.94
2373 2472 8.871629 TTTTTACCACATGATGTTATACAGGT 57.128 30.769 0.00 7.92 0.00 4.00
2374 2473 8.871629 TTTTACCACATGATGTTATACAGGTT 57.128 30.769 8.09 0.00 0.00 3.50
2375 2474 8.871629 TTTACCACATGATGTTATACAGGTTT 57.128 30.769 8.09 0.00 0.00 3.27
2376 2475 8.871629 TTACCACATGATGTTATACAGGTTTT 57.128 30.769 8.09 0.00 0.00 2.43
2377 2476 7.775053 ACCACATGATGTTATACAGGTTTTT 57.225 32.000 0.00 0.00 0.00 1.94
2409 2508 9.716507 CGTATAACTGAAATATTTTTCACAGGG 57.283 33.333 15.29 1.71 44.81 4.45
2410 2509 9.516314 GTATAACTGAAATATTTTTCACAGGGC 57.484 33.333 15.29 0.00 44.81 5.19
2411 2510 5.405935 ACTGAAATATTTTTCACAGGGCC 57.594 39.130 15.29 0.00 44.81 5.80
2412 2511 5.086621 ACTGAAATATTTTTCACAGGGCCT 58.913 37.500 0.00 0.00 44.81 5.19
2413 2512 5.543790 ACTGAAATATTTTTCACAGGGCCTT 59.456 36.000 1.32 0.00 44.81 4.35
2414 2513 6.036577 TGAAATATTTTTCACAGGGCCTTC 57.963 37.500 1.32 0.00 44.81 3.46
2415 2514 5.046663 TGAAATATTTTTCACAGGGCCTTCC 60.047 40.000 1.32 0.00 44.81 3.46
2416 2515 5.187772 GAAATATTTTTCACAGGGCCTTCCT 59.812 40.000 1.32 0.00 42.74 3.36
2417 2516 2.470057 TTTTTCACAGGGCCTTCCTT 57.530 45.000 1.32 0.00 45.47 3.36
2418 2517 1.995376 TTTTCACAGGGCCTTCCTTC 58.005 50.000 1.32 0.00 45.47 3.46
2419 2518 1.149101 TTTCACAGGGCCTTCCTTCT 58.851 50.000 1.32 0.00 45.47 2.85
2420 2519 1.149101 TTCACAGGGCCTTCCTTCTT 58.851 50.000 1.32 0.00 45.47 2.52
2421 2520 1.149101 TCACAGGGCCTTCCTTCTTT 58.851 50.000 1.32 0.00 45.47 2.52
2422 2521 1.073923 TCACAGGGCCTTCCTTCTTTC 59.926 52.381 1.32 0.00 45.47 2.62
2423 2522 1.074566 CACAGGGCCTTCCTTCTTTCT 59.925 52.381 1.32 0.00 45.47 2.52
2424 2523 2.305927 CACAGGGCCTTCCTTCTTTCTA 59.694 50.000 1.32 0.00 45.47 2.10
2425 2524 2.306219 ACAGGGCCTTCCTTCTTTCTAC 59.694 50.000 1.32 0.00 45.47 2.59
2426 2525 2.573915 CAGGGCCTTCCTTCTTTCTACT 59.426 50.000 1.32 0.00 45.47 2.57
2427 2526 3.009584 CAGGGCCTTCCTTCTTTCTACTT 59.990 47.826 1.32 0.00 45.47 2.24
2428 2527 3.264706 AGGGCCTTCCTTCTTTCTACTTC 59.735 47.826 0.00 0.00 45.47 3.01
2429 2528 3.611970 GGCCTTCCTTCTTTCTACTTCC 58.388 50.000 0.00 0.00 0.00 3.46
2430 2529 3.264706 GGCCTTCCTTCTTTCTACTTCCT 59.735 47.826 0.00 0.00 0.00 3.36
2431 2530 4.509616 GCCTTCCTTCTTTCTACTTCCTC 58.490 47.826 0.00 0.00 0.00 3.71
2432 2531 4.624364 GCCTTCCTTCTTTCTACTTCCTCC 60.624 50.000 0.00 0.00 0.00 4.30
2433 2532 4.532521 CCTTCCTTCTTTCTACTTCCTCCA 59.467 45.833 0.00 0.00 0.00 3.86
2434 2533 5.190726 CCTTCCTTCTTTCTACTTCCTCCAT 59.809 44.000 0.00 0.00 0.00 3.41
2435 2534 6.296720 CCTTCCTTCTTTCTACTTCCTCCATT 60.297 42.308 0.00 0.00 0.00 3.16
2436 2535 6.301169 TCCTTCTTTCTACTTCCTCCATTC 57.699 41.667 0.00 0.00 0.00 2.67
2437 2536 5.189934 TCCTTCTTTCTACTTCCTCCATTCC 59.810 44.000 0.00 0.00 0.00 3.01
2438 2537 5.045578 CCTTCTTTCTACTTCCTCCATTCCA 60.046 44.000 0.00 0.00 0.00 3.53
2439 2538 5.422214 TCTTTCTACTTCCTCCATTCCAC 57.578 43.478 0.00 0.00 0.00 4.02
2440 2539 4.844085 TCTTTCTACTTCCTCCATTCCACA 59.156 41.667 0.00 0.00 0.00 4.17
2441 2540 5.309543 TCTTTCTACTTCCTCCATTCCACAA 59.690 40.000 0.00 0.00 0.00 3.33
2442 2541 5.779241 TTCTACTTCCTCCATTCCACAAT 57.221 39.130 0.00 0.00 0.00 2.71
2443 2542 6.884472 TTCTACTTCCTCCATTCCACAATA 57.116 37.500 0.00 0.00 0.00 1.90
2444 2543 7.451731 TTCTACTTCCTCCATTCCACAATAT 57.548 36.000 0.00 0.00 0.00 1.28
2445 2544 8.561536 TTCTACTTCCTCCATTCCACAATATA 57.438 34.615 0.00 0.00 0.00 0.86
2446 2545 8.742125 TCTACTTCCTCCATTCCACAATATAT 57.258 34.615 0.00 0.00 0.00 0.86
2447 2546 9.170890 TCTACTTCCTCCATTCCACAATATATT 57.829 33.333 0.00 0.00 0.00 1.28
2448 2547 9.224267 CTACTTCCTCCATTCCACAATATATTG 57.776 37.037 21.42 21.42 43.26 1.90
2449 2548 6.491403 ACTTCCTCCATTCCACAATATATTGC 59.509 38.462 22.66 0.00 41.38 3.56
2450 2549 5.003160 TCCTCCATTCCACAATATATTGCG 58.997 41.667 22.66 14.70 41.38 4.85
2451 2550 4.379813 CCTCCATTCCACAATATATTGCGC 60.380 45.833 22.66 0.00 41.38 6.09
2452 2551 3.505680 TCCATTCCACAATATATTGCGCC 59.494 43.478 22.66 0.00 41.38 6.53
2453 2552 3.367292 CCATTCCACAATATATTGCGCCC 60.367 47.826 22.66 0.00 41.38 6.13
2454 2553 2.949177 TCCACAATATATTGCGCCCT 57.051 45.000 22.66 2.85 41.38 5.19
2455 2554 2.503331 TCCACAATATATTGCGCCCTG 58.497 47.619 22.66 13.78 41.38 4.45
2456 2555 1.068333 CCACAATATATTGCGCCCTGC 60.068 52.381 22.66 0.00 41.38 4.85
2465 2564 4.671406 GCGCCCTGCATTTTTCAA 57.329 50.000 0.00 0.00 45.45 2.69
2466 2565 2.448477 GCGCCCTGCATTTTTCAAG 58.552 52.632 0.00 0.00 45.45 3.02
2467 2566 0.038343 GCGCCCTGCATTTTTCAAGA 60.038 50.000 0.00 0.00 45.45 3.02
2468 2567 1.605202 GCGCCCTGCATTTTTCAAGAA 60.605 47.619 0.00 0.00 45.45 2.52
2469 2568 2.061028 CGCCCTGCATTTTTCAAGAAC 58.939 47.619 0.00 0.00 0.00 3.01
2470 2569 2.288395 CGCCCTGCATTTTTCAAGAACT 60.288 45.455 0.00 0.00 0.00 3.01
2471 2570 3.057596 CGCCCTGCATTTTTCAAGAACTA 60.058 43.478 0.00 0.00 0.00 2.24
2472 2571 4.558496 CGCCCTGCATTTTTCAAGAACTAA 60.558 41.667 0.00 0.00 0.00 2.24
2473 2572 4.925646 GCCCTGCATTTTTCAAGAACTAAG 59.074 41.667 0.00 0.00 0.00 2.18
2474 2573 5.509670 GCCCTGCATTTTTCAAGAACTAAGT 60.510 40.000 0.00 0.00 0.00 2.24
2475 2574 6.515832 CCCTGCATTTTTCAAGAACTAAGTT 58.484 36.000 0.00 0.00 0.00 2.66
2476 2575 6.986231 CCCTGCATTTTTCAAGAACTAAGTTT 59.014 34.615 0.00 0.00 0.00 2.66
2477 2576 7.042523 CCCTGCATTTTTCAAGAACTAAGTTTG 60.043 37.037 0.00 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 0.458669 CTAGTACCACAATCCGGCGT 59.541 55.000 6.01 0.00 0.00 5.68
82 83 1.202510 AGATGGAGCTCGTGATCAAGC 60.203 52.381 10.83 10.83 38.84 4.01
129 130 2.748647 TCATCTCGTCCGGCGACA 60.749 61.111 9.30 7.64 45.68 4.35
140 141 0.688087 AGGAGGGGGTTCGTCATCTC 60.688 60.000 0.00 0.00 32.28 2.75
164 165 0.041386 ACTAAAGGGTCGGCTCCTCT 59.959 55.000 0.00 0.00 32.59 3.69
178 179 1.475280 CCATCGACCTCCACGACTAAA 59.525 52.381 0.00 0.00 42.37 1.85
213 214 1.445942 CGGACCTTGGTGTCACAGT 59.554 57.895 5.12 0.00 36.97 3.55
246 247 0.530744 AGTCATAGTTCTTCGCGCCA 59.469 50.000 0.00 0.00 0.00 5.69
261 262 1.960417 TGTTGACGATGCCAAAGTCA 58.040 45.000 2.11 2.11 42.36 3.41
267 268 1.001860 TCACAGATGTTGACGATGCCA 59.998 47.619 0.00 0.00 0.00 4.92
323 324 1.988406 ACTACACCGCCTTCCCTCC 60.988 63.158 0.00 0.00 0.00 4.30
328 329 1.467035 CGTCTACACTACACCGCCTTC 60.467 57.143 0.00 0.00 0.00 3.46
329 330 0.524862 CGTCTACACTACACCGCCTT 59.475 55.000 0.00 0.00 0.00 4.35
333 334 0.454600 ATGCCGTCTACACTACACCG 59.545 55.000 0.00 0.00 0.00 4.94
339 340 1.338769 GGTTCCAATGCCGTCTACACT 60.339 52.381 0.00 0.00 0.00 3.55
372 373 0.517316 GTCCGTTTGTCTGGTCATGC 59.483 55.000 0.00 0.00 0.00 4.06
374 375 0.320421 CCGTCCGTTTGTCTGGTCAT 60.320 55.000 0.00 0.00 0.00 3.06
375 376 1.068417 CCGTCCGTTTGTCTGGTCA 59.932 57.895 0.00 0.00 0.00 4.02
423 424 2.367567 TGGCAACCGAGAAGTCTACTTT 59.632 45.455 0.00 0.00 36.11 2.66
424 425 1.968493 TGGCAACCGAGAAGTCTACTT 59.032 47.619 0.00 0.00 39.23 2.24
438 439 2.222445 ACTTTAATGTCGACGTGGCAAC 59.778 45.455 11.82 0.00 0.00 4.17
486 487 1.170442 CATTGATGCCAGTCAGTGCA 58.830 50.000 0.00 0.00 42.52 4.57
489 490 1.002430 ACGACATTGATGCCAGTCAGT 59.998 47.619 0.00 0.00 0.00 3.41
521 522 0.535102 CAGCTTGTTCCAGAACGGGT 60.535 55.000 6.08 4.56 43.94 5.28
522 523 0.250295 TCAGCTTGTTCCAGAACGGG 60.250 55.000 6.08 2.85 43.94 5.28
599 600 1.132199 GACACGTACACGCCTGATCG 61.132 60.000 0.85 0.00 44.43 3.69
601 602 1.154093 CGACACGTACACGCCTGAT 60.154 57.895 0.85 0.00 44.43 2.90
635 637 6.460261 GCAAGATACAAATTAGGGGAGCTTTC 60.460 42.308 0.00 0.00 0.00 2.62
654 657 3.084039 TCCGAAATTCTGCAAGCAAGAT 58.916 40.909 0.00 0.00 0.00 2.40
676 679 2.156310 GTCTATCGACGCGTTTGGTTTT 59.844 45.455 15.53 0.00 0.00 2.43
686 689 0.660595 CCACATCGGTCTATCGACGC 60.661 60.000 0.00 0.00 42.21 5.19
742 753 4.584394 CGGACTAAAATGTACGCAAATCC 58.416 43.478 0.00 0.00 37.47 3.01
772 783 2.010497 GATCTTTCAACGGCCTCCTTC 58.990 52.381 0.00 0.00 0.00 3.46
773 784 1.676014 CGATCTTTCAACGGCCTCCTT 60.676 52.381 0.00 0.00 0.00 3.36
800 815 0.249911 GACCTTGCCTGACGTGTCTT 60.250 55.000 0.00 0.00 0.00 3.01
833 848 2.412870 GAAGCGTTTGATTTTTGGGGG 58.587 47.619 0.00 0.00 0.00 5.40
837 852 5.757886 TGTAGAGGAAGCGTTTGATTTTTG 58.242 37.500 0.00 0.00 0.00 2.44
914 929 3.007940 TGCGAGATCTTTTCTTTCAGGGA 59.992 43.478 0.00 0.00 33.74 4.20
942 957 2.637872 TCTCTCCTAGCTCCTCTCTAGC 59.362 54.545 0.00 0.00 40.40 3.42
943 958 3.904339 ACTCTCTCCTAGCTCCTCTCTAG 59.096 52.174 0.00 0.00 34.70 2.43
1020 1035 1.032657 TGCTCTCGTGGGTCTCTAGC 61.033 60.000 0.00 0.00 0.00 3.42
1252 1280 0.322816 AGCAAGATCGGGTGTGCATT 60.323 50.000 0.00 0.00 39.50 3.56
1260 1288 3.334691 TGAACAAACTAGCAAGATCGGG 58.665 45.455 0.00 0.00 0.00 5.14
1268 1296 9.399797 AGATATGAATGAATGAACAAACTAGCA 57.600 29.630 0.00 0.00 0.00 3.49
1281 1309 8.756927 ACGGATCTACATCAGATATGAATGAAT 58.243 33.333 0.00 0.00 44.41 2.57
1287 1315 5.325239 ACCACGGATCTACATCAGATATGA 58.675 41.667 0.00 0.00 44.41 2.15
1288 1316 5.651387 ACCACGGATCTACATCAGATATG 57.349 43.478 0.00 0.00 44.41 1.78
1289 1317 7.631594 GCAATACCACGGATCTACATCAGATAT 60.632 40.741 0.00 0.00 44.41 1.63
1290 1318 6.350194 GCAATACCACGGATCTACATCAGATA 60.350 42.308 0.00 0.00 44.41 1.98
1306 1334 2.472695 TGTCACCTCTGCAATACCAC 57.527 50.000 0.00 0.00 0.00 4.16
1312 1340 1.597854 CGCCTTGTCACCTCTGCAA 60.598 57.895 0.00 0.00 0.00 4.08
1481 1512 0.107606 TGTTGCGTGTTGGTGGTAGT 60.108 50.000 0.00 0.00 0.00 2.73
1487 1518 1.806568 CTTGGTGTTGCGTGTTGGT 59.193 52.632 0.00 0.00 0.00 3.67
1489 1520 0.457509 TTGCTTGGTGTTGCGTGTTG 60.458 50.000 0.00 0.00 0.00 3.33
1490 1521 0.457681 GTTGCTTGGTGTTGCGTGTT 60.458 50.000 0.00 0.00 0.00 3.32
1491 1522 1.138671 GTTGCTTGGTGTTGCGTGT 59.861 52.632 0.00 0.00 0.00 4.49
1492 1523 1.588667 GGTTGCTTGGTGTTGCGTG 60.589 57.895 0.00 0.00 0.00 5.34
1493 1524 2.804856 GGTTGCTTGGTGTTGCGT 59.195 55.556 0.00 0.00 0.00 5.24
1494 1525 2.353376 CGGTTGCTTGGTGTTGCG 60.353 61.111 0.00 0.00 0.00 4.85
1495 1526 2.027460 CCGGTTGCTTGGTGTTGC 59.973 61.111 0.00 0.00 0.00 4.17
1544 1581 6.805760 CAGCTCTATTTTCTTTTCTTCTTGCC 59.194 38.462 0.00 0.00 0.00 4.52
1562 1599 5.464030 ACTCCGTTCTTTAAACAGCTCTA 57.536 39.130 0.00 0.00 0.00 2.43
1579 1616 0.109132 AACGGCGGTACTTAACTCCG 60.109 55.000 13.24 1.14 44.27 4.63
1650 1690 4.771684 CGTTAGGTACGGTCACGG 57.228 61.111 0.00 0.00 46.42 4.94
1752 1792 5.742063 ACGGGAGAGACGTGATATGATATA 58.258 41.667 0.00 0.00 43.78 0.86
1778 1818 1.067582 GCTAATCCCCACCGAGACG 59.932 63.158 0.00 0.00 0.00 4.18
1779 1819 0.831307 AAGCTAATCCCCACCGAGAC 59.169 55.000 0.00 0.00 0.00 3.36
1780 1820 1.120530 GAAGCTAATCCCCACCGAGA 58.879 55.000 0.00 0.00 0.00 4.04
1781 1821 1.123928 AGAAGCTAATCCCCACCGAG 58.876 55.000 0.00 0.00 0.00 4.63
1804 1844 9.719355 TGCTTAATTAGTTGTAGTTGATCTTCA 57.281 29.630 0.00 0.00 0.00 3.02
1822 1862 4.922206 TCACCTTCTCACCATGCTTAATT 58.078 39.130 0.00 0.00 0.00 1.40
1828 1871 0.035630 AGCTCACCTTCTCACCATGC 60.036 55.000 0.00 0.00 0.00 4.06
1839 1882 1.534959 TGCCTCAGTCAGCTCACCT 60.535 57.895 0.00 0.00 0.00 4.00
1841 1884 0.669932 CACTGCCTCAGTCAGCTCAC 60.670 60.000 0.00 0.00 43.43 3.51
1865 1959 0.183492 ACACAACCACATCCACAGCT 59.817 50.000 0.00 0.00 0.00 4.24
1907 2004 2.868583 CCAGGCATGTCAAACTCTATCG 59.131 50.000 0.00 0.00 0.00 2.92
1936 2035 8.877864 ACACCCAGAAATAGAATACAAAATCA 57.122 30.769 0.00 0.00 0.00 2.57
1974 2073 7.290248 ACCATATAGTACACCAGTTGATAGCTT 59.710 37.037 0.00 0.00 0.00 3.74
1975 2074 6.782988 ACCATATAGTACACCAGTTGATAGCT 59.217 38.462 0.00 0.00 0.00 3.32
1978 2077 8.983789 TCAAACCATATAGTACACCAGTTGATA 58.016 33.333 0.00 0.00 0.00 2.15
1979 2078 7.857456 TCAAACCATATAGTACACCAGTTGAT 58.143 34.615 0.00 0.00 0.00 2.57
1981 2080 7.915293 TTCAAACCATATAGTACACCAGTTG 57.085 36.000 0.00 0.00 0.00 3.16
1983 2082 7.686434 AGTTTCAAACCATATAGTACACCAGT 58.314 34.615 0.00 0.00 0.00 4.00
1984 2083 8.561738 AAGTTTCAAACCATATAGTACACCAG 57.438 34.615 0.00 0.00 0.00 4.00
1985 2084 8.788806 CAAAGTTTCAAACCATATAGTACACCA 58.211 33.333 0.00 0.00 0.00 4.17
1987 2086 9.005777 TCCAAAGTTTCAAACCATATAGTACAC 57.994 33.333 0.00 0.00 0.00 2.90
1988 2087 9.747898 ATCCAAAGTTTCAAACCATATAGTACA 57.252 29.630 0.00 0.00 0.00 2.90
2006 2105 9.353999 GAACGCAAAATTCTTATTATCCAAAGT 57.646 29.630 0.00 0.00 0.00 2.66
2043 2142 9.486857 GCCGTAATGTTAAATTCTTCTTTCTAC 57.513 33.333 0.00 0.00 0.00 2.59
2044 2143 9.221933 TGCCGTAATGTTAAATTCTTCTTTCTA 57.778 29.630 0.00 0.00 0.00 2.10
2045 2144 8.106247 TGCCGTAATGTTAAATTCTTCTTTCT 57.894 30.769 0.00 0.00 0.00 2.52
2046 2145 8.736751 TTGCCGTAATGTTAAATTCTTCTTTC 57.263 30.769 0.00 0.00 0.00 2.62
2047 2146 9.139174 CATTGCCGTAATGTTAAATTCTTCTTT 57.861 29.630 1.28 0.00 41.02 2.52
2048 2147 8.519526 TCATTGCCGTAATGTTAAATTCTTCTT 58.480 29.630 8.79 0.00 45.17 2.52
2049 2148 8.050778 TCATTGCCGTAATGTTAAATTCTTCT 57.949 30.769 8.79 0.00 45.17 2.85
2050 2149 8.856490 ATCATTGCCGTAATGTTAAATTCTTC 57.144 30.769 8.79 0.00 45.17 2.87
2056 2155 8.138712 GGGATTTATCATTGCCGTAATGTTAAA 58.861 33.333 19.27 19.27 45.54 1.52
2057 2156 7.520776 CGGGATTTATCATTGCCGTAATGTTAA 60.521 37.037 8.79 8.36 45.17 2.01
2058 2157 6.072948 CGGGATTTATCATTGCCGTAATGTTA 60.073 38.462 8.79 3.13 45.17 2.41
2059 2158 5.278266 CGGGATTTATCATTGCCGTAATGTT 60.278 40.000 8.79 4.01 45.17 2.71
2060 2159 4.215399 CGGGATTTATCATTGCCGTAATGT 59.785 41.667 8.79 0.74 45.17 2.71
2061 2160 4.454161 TCGGGATTTATCATTGCCGTAATG 59.546 41.667 2.96 2.96 46.09 1.90
2062 2161 4.647611 TCGGGATTTATCATTGCCGTAAT 58.352 39.130 2.89 0.00 32.26 1.89
2063 2162 4.074627 TCGGGATTTATCATTGCCGTAA 57.925 40.909 2.89 0.00 32.26 3.18
2064 2163 3.755112 TCGGGATTTATCATTGCCGTA 57.245 42.857 2.89 0.00 32.26 4.02
2065 2164 2.616842 GTTCGGGATTTATCATTGCCGT 59.383 45.455 2.89 0.00 32.26 5.68
2066 2165 2.349438 CGTTCGGGATTTATCATTGCCG 60.349 50.000 0.00 0.00 31.82 5.69
2067 2166 2.616842 ACGTTCGGGATTTATCATTGCC 59.383 45.455 0.00 0.00 0.00 4.52
2068 2167 3.963383 ACGTTCGGGATTTATCATTGC 57.037 42.857 0.00 0.00 0.00 3.56
2069 2168 4.514506 CGAACGTTCGGGATTTATCATTG 58.485 43.478 36.53 8.97 46.30 2.82
2070 2169 4.789095 CGAACGTTCGGGATTTATCATT 57.211 40.909 36.53 0.00 46.30 2.57
2083 2182 4.095610 CCATGCTTAAAATCCGAACGTTC 58.904 43.478 18.47 18.47 0.00 3.95
2084 2183 3.504520 ACCATGCTTAAAATCCGAACGTT 59.495 39.130 0.00 0.00 0.00 3.99
2085 2184 3.078837 ACCATGCTTAAAATCCGAACGT 58.921 40.909 0.00 0.00 0.00 3.99
2086 2185 3.757745 ACCATGCTTAAAATCCGAACG 57.242 42.857 0.00 0.00 0.00 3.95
2087 2186 5.124936 AGGTTACCATGCTTAAAATCCGAAC 59.875 40.000 3.51 0.00 0.00 3.95
2088 2187 5.124776 CAGGTTACCATGCTTAAAATCCGAA 59.875 40.000 3.51 0.00 0.00 4.30
2089 2188 4.638421 CAGGTTACCATGCTTAAAATCCGA 59.362 41.667 3.51 0.00 0.00 4.55
2090 2189 4.638421 TCAGGTTACCATGCTTAAAATCCG 59.362 41.667 3.51 0.00 0.00 4.18
2091 2190 6.152831 AGTTCAGGTTACCATGCTTAAAATCC 59.847 38.462 3.51 0.00 0.00 3.01
2092 2191 7.158099 AGTTCAGGTTACCATGCTTAAAATC 57.842 36.000 3.51 0.00 0.00 2.17
2093 2192 7.539034 AAGTTCAGGTTACCATGCTTAAAAT 57.461 32.000 3.51 0.00 0.00 1.82
2094 2193 6.969993 AAGTTCAGGTTACCATGCTTAAAA 57.030 33.333 3.51 0.00 0.00 1.52
2095 2194 6.969993 AAAGTTCAGGTTACCATGCTTAAA 57.030 33.333 3.51 0.00 0.00 1.52
2096 2195 6.969993 AAAAGTTCAGGTTACCATGCTTAA 57.030 33.333 3.51 0.00 0.00 1.85
2097 2196 6.969993 AAAAAGTTCAGGTTACCATGCTTA 57.030 33.333 3.51 0.00 0.00 3.09
2098 2197 5.869649 AAAAAGTTCAGGTTACCATGCTT 57.130 34.783 3.51 0.00 0.00 3.91
2117 2216 5.299782 ACGTGACCTAAAGTTGCCATAAAAA 59.700 36.000 0.00 0.00 0.00 1.94
2118 2217 4.822896 ACGTGACCTAAAGTTGCCATAAAA 59.177 37.500 0.00 0.00 0.00 1.52
2119 2218 4.214545 CACGTGACCTAAAGTTGCCATAAA 59.785 41.667 10.90 0.00 0.00 1.40
2120 2219 3.749088 CACGTGACCTAAAGTTGCCATAA 59.251 43.478 10.90 0.00 0.00 1.90
2121 2220 3.007074 TCACGTGACCTAAAGTTGCCATA 59.993 43.478 15.76 0.00 0.00 2.74
2122 2221 2.151202 CACGTGACCTAAAGTTGCCAT 58.849 47.619 10.90 0.00 0.00 4.40
2123 2222 1.139256 TCACGTGACCTAAAGTTGCCA 59.861 47.619 15.76 0.00 0.00 4.92
2124 2223 1.798813 CTCACGTGACCTAAAGTTGCC 59.201 52.381 15.76 0.00 0.00 4.52
2125 2224 1.798813 CCTCACGTGACCTAAAGTTGC 59.201 52.381 15.76 0.00 0.00 4.17
2126 2225 3.107642 ACCTCACGTGACCTAAAGTTG 57.892 47.619 15.76 1.06 0.00 3.16
2127 2226 3.463944 CAACCTCACGTGACCTAAAGTT 58.536 45.455 15.76 8.57 0.00 2.66
2128 2227 2.224209 CCAACCTCACGTGACCTAAAGT 60.224 50.000 15.76 2.61 0.00 2.66
2129 2228 2.224209 ACCAACCTCACGTGACCTAAAG 60.224 50.000 15.76 3.48 0.00 1.85
2130 2229 1.764134 ACCAACCTCACGTGACCTAAA 59.236 47.619 15.76 0.00 0.00 1.85
2131 2230 1.416243 ACCAACCTCACGTGACCTAA 58.584 50.000 15.76 0.00 0.00 2.69
2132 2231 2.291209 TACCAACCTCACGTGACCTA 57.709 50.000 15.76 0.00 0.00 3.08
2133 2232 1.416243 TTACCAACCTCACGTGACCT 58.584 50.000 15.76 0.00 0.00 3.85
2134 2233 1.869132 GTTTACCAACCTCACGTGACC 59.131 52.381 15.76 0.00 0.00 4.02
2135 2234 2.553086 TGTTTACCAACCTCACGTGAC 58.447 47.619 15.76 1.68 31.02 3.67
2136 2235 2.983907 TGTTTACCAACCTCACGTGA 57.016 45.000 18.88 18.88 31.02 4.35
2137 2236 3.304391 CCAATGTTTACCAACCTCACGTG 60.304 47.826 9.94 9.94 31.02 4.49
2138 2237 2.882137 CCAATGTTTACCAACCTCACGT 59.118 45.455 0.00 0.00 31.02 4.49
2139 2238 3.142951 TCCAATGTTTACCAACCTCACG 58.857 45.455 0.00 0.00 31.02 4.35
2140 2239 5.722021 ATTCCAATGTTTACCAACCTCAC 57.278 39.130 0.00 0.00 31.02 3.51
2141 2240 6.739331 AAATTCCAATGTTTACCAACCTCA 57.261 33.333 0.00 0.00 31.02 3.86
2142 2241 7.384932 CAGAAAATTCCAATGTTTACCAACCTC 59.615 37.037 0.00 0.00 31.02 3.85
2143 2242 7.216494 CAGAAAATTCCAATGTTTACCAACCT 58.784 34.615 0.00 0.00 31.02 3.50
2144 2243 6.426633 CCAGAAAATTCCAATGTTTACCAACC 59.573 38.462 0.00 0.00 31.02 3.77
2145 2244 6.426633 CCCAGAAAATTCCAATGTTTACCAAC 59.573 38.462 0.00 0.00 0.00 3.77
2146 2245 6.327626 TCCCAGAAAATTCCAATGTTTACCAA 59.672 34.615 0.00 0.00 0.00 3.67
2147 2246 5.841237 TCCCAGAAAATTCCAATGTTTACCA 59.159 36.000 0.00 0.00 0.00 3.25
2148 2247 6.353404 TCCCAGAAAATTCCAATGTTTACC 57.647 37.500 0.00 0.00 0.00 2.85
2149 2248 8.669946 TTTTCCCAGAAAATTCCAATGTTTAC 57.330 30.769 0.00 0.00 0.00 2.01
2173 2272 5.353956 GGCAACTTTGTTCCAGTTCATTTTT 59.646 36.000 0.00 0.00 31.83 1.94
2174 2273 4.875536 GGCAACTTTGTTCCAGTTCATTTT 59.124 37.500 0.00 0.00 31.83 1.82
2175 2274 4.081198 TGGCAACTTTGTTCCAGTTCATTT 60.081 37.500 0.00 0.00 31.83 2.32
2176 2275 3.450457 TGGCAACTTTGTTCCAGTTCATT 59.550 39.130 0.00 0.00 31.83 2.57
2177 2276 3.030291 TGGCAACTTTGTTCCAGTTCAT 58.970 40.909 0.00 0.00 31.83 2.57
2178 2277 2.451490 TGGCAACTTTGTTCCAGTTCA 58.549 42.857 0.00 0.00 31.83 3.18
2179 2278 3.181476 ACATGGCAACTTTGTTCCAGTTC 60.181 43.478 0.00 0.00 31.83 3.01
2180 2279 2.765699 ACATGGCAACTTTGTTCCAGTT 59.234 40.909 0.00 0.00 34.67 3.16
2181 2280 2.362077 GACATGGCAACTTTGTTCCAGT 59.638 45.455 0.00 0.00 34.45 4.00
2182 2281 2.624838 AGACATGGCAACTTTGTTCCAG 59.375 45.455 0.00 0.00 34.45 3.86
2183 2282 2.665165 AGACATGGCAACTTTGTTCCA 58.335 42.857 0.00 0.00 34.45 3.53
2184 2283 3.733443 AAGACATGGCAACTTTGTTCC 57.267 42.857 0.00 0.00 34.45 3.62
2185 2284 5.587289 TGTTAAGACATGGCAACTTTGTTC 58.413 37.500 0.00 0.00 34.45 3.18
2186 2285 5.590530 TGTTAAGACATGGCAACTTTGTT 57.409 34.783 0.00 0.00 34.45 2.83
2187 2286 5.127031 AGTTGTTAAGACATGGCAACTTTGT 59.873 36.000 0.00 1.07 44.79 2.83
2188 2287 5.591099 AGTTGTTAAGACATGGCAACTTTG 58.409 37.500 0.00 0.00 44.79 2.77
2189 2288 5.852282 AGTTGTTAAGACATGGCAACTTT 57.148 34.783 0.00 0.00 44.79 2.66
2190 2289 6.952773 TTAGTTGTTAAGACATGGCAACTT 57.047 33.333 12.43 0.44 44.79 2.66
2192 2291 8.487176 CAATTTTAGTTGTTAAGACATGGCAAC 58.513 33.333 0.00 0.00 39.52 4.17
2193 2292 7.170658 GCAATTTTAGTTGTTAAGACATGGCAA 59.829 33.333 0.00 0.00 35.29 4.52
2194 2293 6.644592 GCAATTTTAGTTGTTAAGACATGGCA 59.355 34.615 0.00 0.00 35.29 4.92
2195 2294 6.090763 GGCAATTTTAGTTGTTAAGACATGGC 59.909 38.462 0.00 0.00 35.29 4.40
2196 2295 7.116233 GTGGCAATTTTAGTTGTTAAGACATGG 59.884 37.037 0.00 0.00 35.29 3.66
2197 2296 7.116233 GGTGGCAATTTTAGTTGTTAAGACATG 59.884 37.037 0.00 0.00 35.29 3.21
2198 2297 7.015195 AGGTGGCAATTTTAGTTGTTAAGACAT 59.985 33.333 0.00 0.00 35.29 3.06
2199 2298 6.322712 AGGTGGCAATTTTAGTTGTTAAGACA 59.677 34.615 0.00 0.00 0.00 3.41
2200 2299 6.745116 AGGTGGCAATTTTAGTTGTTAAGAC 58.255 36.000 0.00 0.00 0.00 3.01
2201 2300 6.293735 CGAGGTGGCAATTTTAGTTGTTAAGA 60.294 38.462 0.00 0.00 0.00 2.10
2202 2301 5.856455 CGAGGTGGCAATTTTAGTTGTTAAG 59.144 40.000 0.00 0.00 0.00 1.85
2203 2302 5.764131 CGAGGTGGCAATTTTAGTTGTTAA 58.236 37.500 0.00 0.00 0.00 2.01
2204 2303 4.320641 GCGAGGTGGCAATTTTAGTTGTTA 60.321 41.667 0.00 0.00 0.00 2.41
2205 2304 3.552068 GCGAGGTGGCAATTTTAGTTGTT 60.552 43.478 0.00 0.00 0.00 2.83
2206 2305 2.030274 GCGAGGTGGCAATTTTAGTTGT 60.030 45.455 0.00 0.00 0.00 3.32
2207 2306 2.595386 GCGAGGTGGCAATTTTAGTTG 58.405 47.619 0.00 0.00 0.00 3.16
2208 2307 1.199097 CGCGAGGTGGCAATTTTAGTT 59.801 47.619 0.00 0.00 0.00 2.24
2209 2308 0.802494 CGCGAGGTGGCAATTTTAGT 59.198 50.000 0.00 0.00 0.00 2.24
2210 2309 0.802494 ACGCGAGGTGGCAATTTTAG 59.198 50.000 15.93 0.00 0.00 1.85
2211 2310 0.800012 GACGCGAGGTGGCAATTTTA 59.200 50.000 15.93 0.00 0.00 1.52
2212 2311 1.169661 TGACGCGAGGTGGCAATTTT 61.170 50.000 15.93 0.00 0.00 1.82
2213 2312 1.169661 TTGACGCGAGGTGGCAATTT 61.170 50.000 15.93 0.00 36.03 1.82
2214 2313 1.599518 TTGACGCGAGGTGGCAATT 60.600 52.632 15.93 0.00 36.03 2.32
2215 2314 1.377202 ATTGACGCGAGGTGGCAAT 60.377 52.632 15.93 4.49 45.14 3.56
2216 2315 0.320858 TAATTGACGCGAGGTGGCAA 60.321 50.000 15.93 7.40 45.40 4.52
2217 2316 0.320858 TTAATTGACGCGAGGTGGCA 60.321 50.000 15.93 0.00 0.00 4.92
2218 2317 0.800012 TTTAATTGACGCGAGGTGGC 59.200 50.000 15.93 0.00 0.00 5.01
2219 2318 2.073816 ACTTTAATTGACGCGAGGTGG 58.926 47.619 15.93 0.00 0.00 4.61
2220 2319 3.059188 ACAACTTTAATTGACGCGAGGTG 60.059 43.478 15.93 8.60 33.57 4.00
2221 2320 3.135994 ACAACTTTAATTGACGCGAGGT 58.864 40.909 15.93 0.00 33.57 3.85
2222 2321 3.185594 TGACAACTTTAATTGACGCGAGG 59.814 43.478 15.93 0.00 33.57 4.63
2223 2322 4.383774 TGACAACTTTAATTGACGCGAG 57.616 40.909 15.93 0.00 33.57 5.03
2224 2323 4.212425 ACATGACAACTTTAATTGACGCGA 59.788 37.500 15.93 0.00 33.57 5.87
2225 2324 4.463209 ACATGACAACTTTAATTGACGCG 58.537 39.130 3.53 3.53 33.57 6.01
2226 2325 7.845617 TTTACATGACAACTTTAATTGACGC 57.154 32.000 0.00 0.00 33.57 5.19
2229 2328 9.790389 ACGTTTTTACATGACAACTTTAATTGA 57.210 25.926 0.00 0.00 33.57 2.57
2232 2331 8.949953 CGAACGTTTTTACATGACAACTTTAAT 58.050 29.630 0.46 0.00 0.00 1.40
2233 2332 7.428761 CCGAACGTTTTTACATGACAACTTTAA 59.571 33.333 0.46 0.00 0.00 1.52
2234 2333 6.906143 CCGAACGTTTTTACATGACAACTTTA 59.094 34.615 0.46 0.00 0.00 1.85
2235 2334 5.740099 CCGAACGTTTTTACATGACAACTTT 59.260 36.000 0.46 0.00 0.00 2.66
2236 2335 5.267776 CCGAACGTTTTTACATGACAACTT 58.732 37.500 0.46 0.00 0.00 2.66
2237 2336 4.260866 CCCGAACGTTTTTACATGACAACT 60.261 41.667 0.46 0.00 0.00 3.16
2238 2337 3.969981 CCCGAACGTTTTTACATGACAAC 59.030 43.478 0.46 0.00 0.00 3.32
2239 2338 3.875727 TCCCGAACGTTTTTACATGACAA 59.124 39.130 0.46 0.00 0.00 3.18
2240 2339 3.464907 TCCCGAACGTTTTTACATGACA 58.535 40.909 0.46 0.00 0.00 3.58
2241 2340 4.152759 TCATCCCGAACGTTTTTACATGAC 59.847 41.667 0.46 0.00 0.00 3.06
2242 2341 4.316645 TCATCCCGAACGTTTTTACATGA 58.683 39.130 0.46 4.66 0.00 3.07
2243 2342 4.671880 TCATCCCGAACGTTTTTACATG 57.328 40.909 0.46 2.27 0.00 3.21
2244 2343 5.692613 TTTCATCCCGAACGTTTTTACAT 57.307 34.783 0.46 0.00 31.73 2.29
2245 2344 5.453648 CATTTCATCCCGAACGTTTTTACA 58.546 37.500 0.46 0.00 31.73 2.41
2246 2345 4.322539 GCATTTCATCCCGAACGTTTTTAC 59.677 41.667 0.46 0.00 31.73 2.01
2247 2346 4.216687 AGCATTTCATCCCGAACGTTTTTA 59.783 37.500 0.46 0.00 31.73 1.52
2248 2347 3.005367 AGCATTTCATCCCGAACGTTTTT 59.995 39.130 0.46 0.00 31.73 1.94
2249 2348 2.556622 AGCATTTCATCCCGAACGTTTT 59.443 40.909 0.46 0.00 31.73 2.43
2250 2349 2.159382 AGCATTTCATCCCGAACGTTT 58.841 42.857 0.46 0.00 31.73 3.60
2251 2350 1.821216 AGCATTTCATCCCGAACGTT 58.179 45.000 0.00 0.00 31.73 3.99
2252 2351 1.821216 AAGCATTTCATCCCGAACGT 58.179 45.000 0.00 0.00 31.73 3.99
2253 2352 4.527564 GATTAAGCATTTCATCCCGAACG 58.472 43.478 0.00 0.00 31.73 3.95
2254 2353 4.554723 CGGATTAAGCATTTCATCCCGAAC 60.555 45.833 0.00 0.00 34.71 3.95
2255 2354 3.563808 CGGATTAAGCATTTCATCCCGAA 59.436 43.478 0.00 0.00 34.71 4.30
2256 2355 3.138304 CGGATTAAGCATTTCATCCCGA 58.862 45.455 0.00 0.00 34.71 5.14
2257 2356 3.138304 TCGGATTAAGCATTTCATCCCG 58.862 45.455 0.00 0.00 34.71 5.14
2258 2357 4.338118 TGTTCGGATTAAGCATTTCATCCC 59.662 41.667 0.00 0.00 34.71 3.85
2259 2358 5.499139 TGTTCGGATTAAGCATTTCATCC 57.501 39.130 0.00 0.00 34.80 3.51
2260 2359 7.992180 AAATGTTCGGATTAAGCATTTCATC 57.008 32.000 0.00 0.00 35.61 2.92
2261 2360 8.902806 TCTAAATGTTCGGATTAAGCATTTCAT 58.097 29.630 0.00 0.00 39.51 2.57
2262 2361 8.275015 TCTAAATGTTCGGATTAAGCATTTCA 57.725 30.769 0.00 0.00 39.51 2.69
2263 2362 9.736023 AATCTAAATGTTCGGATTAAGCATTTC 57.264 29.630 0.00 0.00 39.51 2.17
2271 2370 8.995220 CCCGATAAAATCTAAATGTTCGGATTA 58.005 33.333 9.41 0.00 45.79 1.75
2272 2371 7.040686 CCCCGATAAAATCTAAATGTTCGGATT 60.041 37.037 9.41 0.00 45.79 3.01
2273 2372 6.430000 CCCCGATAAAATCTAAATGTTCGGAT 59.570 38.462 9.41 0.00 45.79 4.18
2274 2373 5.761234 CCCCGATAAAATCTAAATGTTCGGA 59.239 40.000 9.41 0.00 45.79 4.55
2275 2374 5.529800 ACCCCGATAAAATCTAAATGTTCGG 59.470 40.000 0.00 0.00 43.32 4.30
2276 2375 6.293244 GGACCCCGATAAAATCTAAATGTTCG 60.293 42.308 0.00 0.00 0.00 3.95
2277 2376 6.771267 AGGACCCCGATAAAATCTAAATGTTC 59.229 38.462 0.00 0.00 0.00 3.18
2278 2377 6.669631 AGGACCCCGATAAAATCTAAATGTT 58.330 36.000 0.00 0.00 0.00 2.71
2279 2378 6.262056 AGGACCCCGATAAAATCTAAATGT 57.738 37.500 0.00 0.00 0.00 2.71
2280 2379 7.717875 TGTTAGGACCCCGATAAAATCTAAATG 59.282 37.037 0.00 0.00 0.00 2.32
2281 2380 7.808218 TGTTAGGACCCCGATAAAATCTAAAT 58.192 34.615 0.00 0.00 0.00 1.40
2282 2381 7.197901 TGTTAGGACCCCGATAAAATCTAAA 57.802 36.000 0.00 0.00 0.00 1.85
2283 2382 6.811634 TGTTAGGACCCCGATAAAATCTAA 57.188 37.500 0.00 0.00 0.00 2.10
2284 2383 7.383156 AATGTTAGGACCCCGATAAAATCTA 57.617 36.000 0.00 0.00 0.00 1.98
2285 2384 5.906772 ATGTTAGGACCCCGATAAAATCT 57.093 39.130 0.00 0.00 0.00 2.40
2286 2385 8.631480 ATTAATGTTAGGACCCCGATAAAATC 57.369 34.615 0.00 0.00 0.00 2.17
2287 2386 9.734984 CTATTAATGTTAGGACCCCGATAAAAT 57.265 33.333 0.00 0.00 0.00 1.82
2288 2387 8.716779 ACTATTAATGTTAGGACCCCGATAAAA 58.283 33.333 0.00 0.00 0.00 1.52
2289 2388 8.152246 CACTATTAATGTTAGGACCCCGATAAA 58.848 37.037 0.00 0.00 0.00 1.40
2290 2389 7.256404 CCACTATTAATGTTAGGACCCCGATAA 60.256 40.741 0.00 0.00 0.00 1.75
2291 2390 6.211986 CCACTATTAATGTTAGGACCCCGATA 59.788 42.308 0.00 0.00 0.00 2.92
2292 2391 5.012768 CCACTATTAATGTTAGGACCCCGAT 59.987 44.000 0.00 0.00 0.00 4.18
2293 2392 4.345837 CCACTATTAATGTTAGGACCCCGA 59.654 45.833 0.00 0.00 0.00 5.14
2294 2393 4.638304 CCACTATTAATGTTAGGACCCCG 58.362 47.826 0.00 0.00 0.00 5.73
2295 2394 4.141344 TGCCACTATTAATGTTAGGACCCC 60.141 45.833 0.00 0.00 0.00 4.95
2296 2395 4.820173 GTGCCACTATTAATGTTAGGACCC 59.180 45.833 0.00 0.00 0.00 4.46
2297 2396 5.681639 AGTGCCACTATTAATGTTAGGACC 58.318 41.667 0.00 0.00 0.00 4.46
2298 2397 5.758784 GGAGTGCCACTATTAATGTTAGGAC 59.241 44.000 0.00 0.00 0.00 3.85
2299 2398 5.163237 GGGAGTGCCACTATTAATGTTAGGA 60.163 44.000 0.00 0.00 35.15 2.94
2300 2399 5.063880 GGGAGTGCCACTATTAATGTTAGG 58.936 45.833 0.00 0.00 35.15 2.69
2301 2400 5.930135 AGGGAGTGCCACTATTAATGTTAG 58.070 41.667 2.50 0.00 35.15 2.34
2302 2401 5.665812 AGAGGGAGTGCCACTATTAATGTTA 59.334 40.000 2.50 0.00 35.15 2.41
2303 2402 4.475016 AGAGGGAGTGCCACTATTAATGTT 59.525 41.667 2.50 0.00 35.15 2.71
2304 2403 4.040755 AGAGGGAGTGCCACTATTAATGT 58.959 43.478 2.50 0.00 35.15 2.71
2305 2404 4.346418 AGAGAGGGAGTGCCACTATTAATG 59.654 45.833 2.50 0.00 35.15 1.90
2306 2405 4.561752 AGAGAGGGAGTGCCACTATTAAT 58.438 43.478 2.50 0.00 35.15 1.40
2307 2406 3.995636 AGAGAGGGAGTGCCACTATTAA 58.004 45.455 2.50 0.00 35.15 1.40
2308 2407 3.689872 AGAGAGGGAGTGCCACTATTA 57.310 47.619 2.50 0.00 35.15 0.98
2309 2408 2.559381 AGAGAGGGAGTGCCACTATT 57.441 50.000 2.50 0.00 35.15 1.73
2310 2409 2.559381 AAGAGAGGGAGTGCCACTAT 57.441 50.000 2.50 0.00 35.15 2.12
2311 2410 2.180276 GAAAGAGAGGGAGTGCCACTA 58.820 52.381 2.50 0.00 35.15 2.74
2312 2411 0.980423 GAAAGAGAGGGAGTGCCACT 59.020 55.000 2.50 0.62 35.15 4.00
2313 2412 0.390472 CGAAAGAGAGGGAGTGCCAC 60.390 60.000 2.50 0.00 35.15 5.01
2314 2413 0.832135 ACGAAAGAGAGGGAGTGCCA 60.832 55.000 2.50 0.00 35.15 4.92
2315 2414 0.390472 CACGAAAGAGAGGGAGTGCC 60.390 60.000 0.00 0.00 0.00 5.01
2316 2415 0.318762 ACACGAAAGAGAGGGAGTGC 59.681 55.000 0.00 0.00 33.36 4.40
2317 2416 1.341531 ACACACGAAAGAGAGGGAGTG 59.658 52.381 0.00 0.00 35.89 3.51
2318 2417 1.705873 ACACACGAAAGAGAGGGAGT 58.294 50.000 0.00 0.00 0.00 3.85
2319 2418 2.821991 AACACACGAAAGAGAGGGAG 57.178 50.000 0.00 0.00 0.00 4.30
2320 2419 4.562757 CCATAAACACACGAAAGAGAGGGA 60.563 45.833 0.00 0.00 0.00 4.20
2321 2420 3.684788 CCATAAACACACGAAAGAGAGGG 59.315 47.826 0.00 0.00 0.00 4.30
2322 2421 4.566004 TCCATAAACACACGAAAGAGAGG 58.434 43.478 0.00 0.00 0.00 3.69
2323 2422 5.230942 ACTCCATAAACACACGAAAGAGAG 58.769 41.667 0.00 0.00 0.00 3.20
2324 2423 5.209818 ACTCCATAAACACACGAAAGAGA 57.790 39.130 0.00 0.00 0.00 3.10
2325 2424 5.924475 AACTCCATAAACACACGAAAGAG 57.076 39.130 0.00 0.00 0.00 2.85
2326 2425 6.687081 AAAACTCCATAAACACACGAAAGA 57.313 33.333 0.00 0.00 0.00 2.52
2348 2447 8.871629 ACCTGTATAACATCATGTGGTAAAAA 57.128 30.769 0.00 0.00 32.74 1.94
2349 2448 8.871629 AACCTGTATAACATCATGTGGTAAAA 57.128 30.769 0.00 0.00 32.74 1.52
2350 2449 8.871629 AAACCTGTATAACATCATGTGGTAAA 57.128 30.769 0.00 0.00 32.74 2.01
2351 2450 8.871629 AAAACCTGTATAACATCATGTGGTAA 57.128 30.769 0.00 0.00 32.74 2.85
2352 2451 8.871629 AAAAACCTGTATAACATCATGTGGTA 57.128 30.769 0.00 0.00 33.73 3.25
2353 2452 7.775053 AAAAACCTGTATAACATCATGTGGT 57.225 32.000 0.00 0.00 0.00 4.16
2390 2489 8.937059 AGGAAGGCCCTGTGAAAAATATTTCAG 61.937 40.741 0.00 4.60 45.56 3.02
2391 2490 7.206902 AGGAAGGCCCTGTGAAAAATATTTCA 61.207 38.462 0.00 0.11 46.82 2.69
2392 2491 5.187772 AGGAAGGCCCTGTGAAAAATATTTC 59.812 40.000 0.00 0.00 45.61 2.17
2393 2492 5.093677 AGGAAGGCCCTGTGAAAAATATTT 58.906 37.500 0.00 0.00 45.61 1.40
2394 2493 4.687976 AGGAAGGCCCTGTGAAAAATATT 58.312 39.130 0.00 0.00 45.61 1.28
2395 2494 4.337264 AGGAAGGCCCTGTGAAAAATAT 57.663 40.909 0.00 0.00 45.61 1.28
2396 2495 3.825908 AGGAAGGCCCTGTGAAAAATA 57.174 42.857 0.00 0.00 45.61 1.40
2397 2496 2.702270 AGGAAGGCCCTGTGAAAAAT 57.298 45.000 0.00 0.00 45.61 1.82
2407 2506 3.611970 GAAGTAGAAAGAAGGAAGGCCC 58.388 50.000 0.00 0.00 33.31 5.80
2408 2507 3.264706 AGGAAGTAGAAAGAAGGAAGGCC 59.735 47.826 0.00 0.00 0.00 5.19
2409 2508 4.509616 GAGGAAGTAGAAAGAAGGAAGGC 58.490 47.826 0.00 0.00 0.00 4.35
2410 2509 4.532521 TGGAGGAAGTAGAAAGAAGGAAGG 59.467 45.833 0.00 0.00 0.00 3.46
2411 2510 5.746990 TGGAGGAAGTAGAAAGAAGGAAG 57.253 43.478 0.00 0.00 0.00 3.46
2412 2511 6.296489 GGAATGGAGGAAGTAGAAAGAAGGAA 60.296 42.308 0.00 0.00 0.00 3.36
2413 2512 5.189934 GGAATGGAGGAAGTAGAAAGAAGGA 59.810 44.000 0.00 0.00 0.00 3.36
2414 2513 5.045578 TGGAATGGAGGAAGTAGAAAGAAGG 60.046 44.000 0.00 0.00 0.00 3.46
2415 2514 5.877564 GTGGAATGGAGGAAGTAGAAAGAAG 59.122 44.000 0.00 0.00 0.00 2.85
2416 2515 5.309543 TGTGGAATGGAGGAAGTAGAAAGAA 59.690 40.000 0.00 0.00 0.00 2.52
2417 2516 4.844085 TGTGGAATGGAGGAAGTAGAAAGA 59.156 41.667 0.00 0.00 0.00 2.52
2418 2517 5.165961 TGTGGAATGGAGGAAGTAGAAAG 57.834 43.478 0.00 0.00 0.00 2.62
2419 2518 5.576563 TTGTGGAATGGAGGAAGTAGAAA 57.423 39.130 0.00 0.00 0.00 2.52
2420 2519 5.779241 ATTGTGGAATGGAGGAAGTAGAA 57.221 39.130 0.00 0.00 0.00 2.10
2421 2520 8.742125 ATATATTGTGGAATGGAGGAAGTAGA 57.258 34.615 0.00 0.00 0.00 2.59
2422 2521 9.224267 CAATATATTGTGGAATGGAGGAAGTAG 57.776 37.037 16.03 0.00 33.22 2.57
2423 2522 7.665559 GCAATATATTGTGGAATGGAGGAAGTA 59.334 37.037 23.14 0.00 39.88 2.24
2424 2523 6.491403 GCAATATATTGTGGAATGGAGGAAGT 59.509 38.462 23.14 0.00 39.88 3.01
2425 2524 6.348786 CGCAATATATTGTGGAATGGAGGAAG 60.349 42.308 25.08 0.00 42.81 3.46
2426 2525 5.473162 CGCAATATATTGTGGAATGGAGGAA 59.527 40.000 25.08 0.00 42.81 3.36
2427 2526 5.003160 CGCAATATATTGTGGAATGGAGGA 58.997 41.667 25.08 0.00 42.81 3.71
2428 2527 4.379813 GCGCAATATATTGTGGAATGGAGG 60.380 45.833 30.50 4.40 45.68 4.30
2429 2528 4.379813 GGCGCAATATATTGTGGAATGGAG 60.380 45.833 30.50 12.36 45.68 3.86
2430 2529 3.505680 GGCGCAATATATTGTGGAATGGA 59.494 43.478 30.50 0.00 45.68 3.41
2431 2530 3.367292 GGGCGCAATATATTGTGGAATGG 60.367 47.826 30.50 12.80 45.68 3.16
2432 2531 3.507233 AGGGCGCAATATATTGTGGAATG 59.493 43.478 30.50 14.52 45.68 2.67
2433 2532 3.507233 CAGGGCGCAATATATTGTGGAAT 59.493 43.478 30.50 12.72 45.68 3.01
2434 2533 2.884012 CAGGGCGCAATATATTGTGGAA 59.116 45.455 30.50 0.00 45.68 3.53
2435 2534 2.503331 CAGGGCGCAATATATTGTGGA 58.497 47.619 30.50 0.00 45.68 4.02
2436 2535 1.068333 GCAGGGCGCAATATATTGTGG 60.068 52.381 30.50 21.14 45.68 4.17
2448 2547 0.038343 TCTTGAAAAATGCAGGGCGC 60.038 50.000 0.00 0.00 42.89 6.53
2449 2548 2.061028 GTTCTTGAAAAATGCAGGGCG 58.939 47.619 0.00 0.00 0.00 6.13
2450 2549 3.391506 AGTTCTTGAAAAATGCAGGGC 57.608 42.857 0.00 0.00 0.00 5.19
2451 2550 6.089249 ACTTAGTTCTTGAAAAATGCAGGG 57.911 37.500 0.00 0.00 0.00 4.45
2452 2551 7.844482 CAAACTTAGTTCTTGAAAAATGCAGG 58.156 34.615 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.