>input_sequence_78938
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------------------------------------------------------ATGGCTGGCCTGAGCGTTCTGCTAGA
GACCCACGAGAGCAACTCCATCAAGGCCAAGATCATCAGCAAGGCCACCCTCCATAGCCCCAAGACCTCCTCACCCCCTT
GGTCGCCGGCAGCGAGGCCCACCGCAAGCACGAGTTCCTTCTTGCAGCGCTGCTTGCTGTGCCACAAGGATCTAGCCGAG
AACAATGACATCTACATGTACAGGTTAGCTAGG----TTGCGCGTGCAGCTGCATCAAGAAGC---------TATAATCA
ATGCACACCCGATCTTGCTAGTTTGTTCATTCATTCATATCTGATGTAGATCCGTGGTAT---TGCAGAGGTGACAAGGC
GTTCTGCAGCGTGGAGTGCCGGTGCAGGCAGATCTTCATCGACGAGGACGCCGGCAGCAGCTTCTGCGCAAAGGGCGCCT
CCACCGCCGCCGTGCGGTCCGGCCGCCGTGCCACTGCCTCCGGCGGCGGCGTCAGCTTCGCGTACTGA------------
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>chr6B_1_TraesCS6B01G236200
TGGCGAGGTGGCGACGCCGACTCCTCCTTGACGCGGGCTCGCGGTGGTGAAGGCGACGCCGGATTGTGGTACTAGAGCGA
TCGCTTGATCACGAGCTCCATCTACGGAGGCACGTCTGCTGCTCCTCCTTGTCGCCGGACGAGATGACGAACCCCCTCCT
TCTCAGAGGAGCCGACCCTTTAGTCGTGGAGGTCGATGGCCCGGAGAGCGACGACTGTGACACCAAGGTCCGGAGCCGCC
ACCTGCTGGCGCGAAGAACTATGACTTTGGCATCGTCAACATCTGTGAGCGAAGACCGAGAGGAGTAGCCATAATGTAAG
CGGGGAGGGAAGGCGGTGTAGTGTAGACGGCATTGGAACCGTGCTTAAATAGGCATGACCAGACAAACGGACGGGAAGCT
GGCTTCAATGTGGCGCACCAGCCAAAGTAGACTTCTCGGTTGCCACGTCGACATTAAAGTGGTGTCACCCGCCCGTCCGG
TCTTGTTGCACTGACTGGCATCAATGTCGTGTGGGAGTCACACCCGTTCTGGAACAAGCTGACCGGCATGAATGCATGGC
GATCGCTTCACGCGGAGAGGGTTTTGGGGTGGGACCTGGCGATCAGGCGTGTACGTGTCGGCGGTCCCAA-GCCATGAAA
GCTCC-CCTAATTTGTATCTTGCTTGCAGAATTTCGGAAAAACCAAACGCGTCGATAGACCGATGTGGTATCGC------
--ACTTGCAGCGTTTGGACATATCGGTCCGAAGGATTTGCGTACATTTTAGTCCGCGTTGGAGAA----GGAGGCCGTTG
AAAGATCGCACGGGAAGACACGTCAGGCAAGGTCCCCGTATAGATTTCCCCCAAAAATCAAACGCTTCCTCTACATGTTC
CATACCGCAGCACACACACTCCTCACTCTTTATAAGCACCAACCCCCTTCCCTGAAAGAAAAGATCTCGCACTCGAGCTA
GAGAGGAGCTAGGAGAGAGTTTGATTAGCTAGCGAGAAGATAGGCATCCCCTTCATGGCTGGCCTGAGCGTTCTGCTAGA
GACCCACGAGAGCAACTCCATCAAGGCCAAGATCATCAGCAAGGCCACCCTCCATAGCCCCAAGACCTCCTCACCCCCTT
GGTCGCCGGCAGCGAGGCCCACCGCAAGCACGAGTTCCTTCTTGCAGCGCTGCTTGCTGTGCCACAAGGATCTAGCCGAG
AACAATGACATCTACATGTACAGGTTAGCTAGG----TTGCGCGTGCAGCTGCATCAAGAAGC---------TATAATCA
ATGCACACCCGATCTTGCTAGTTTGTTCATTCATTCATATCTGATGTAGATCCGTGGTAT---TGCAGAGGTGACAAGGC
GTTCTGCAGCGTGGAGTGCCGGTGCAGGCAGATCTTCATCGACGAGGACGCCGGCAGCAGCTTCTGCGCAAAGGGCGCCT
CCACCGCCGCCGTGCGGTCCGGCCGCCGTGCCACTGCCTCCGGCGGCGGCGTCAGCTTCGCGTACTGATGTACTACCACC
AACACGCAACACCAAGCAACCGGACGCACG------TAGCACGTAACGTACGTGTGCAAAGGCAAGAAGAAAAGAAAATA
GAGCTGTTTAAAGAACGGAGTTAAG---TACCGCCGTTATGTGACAGCTCGTCGGCGGGGGCCCACACGCGACGGGGAGC
GTACGTGTCCCGTGACCGTACCTAACGGATAAGATGGCCGGAGAGCTGGCCCCACCTGAAGCGGATCAGGATCCAATAAA
CTGACGATACCTTTTTTTAATTCTTTATTATTATATCATATCACGTCTCTCCCGTCCCGTCTCGGTGGGGATTAGCTTCT
GCGTGAAGATCAACTACAACTAA---TTAAGCATGGTGAGAAGGTGAGCTGACTGAGGCAG-------------------
--------------------------------TGAGGCAGCTGTGGATGTGGTTGTGTGA---GTACAAGGATGGAGTGA
TTGCGAT--AGAGTTTGACATGCCTGGCGCCTTGTGATTTTGTATTCTATTTCTGGGTGTAACAGTGCTAGCAAGCTATC
AACTGGTGTACTATATGGTTTGAAACTTTGGATAATAAGAATTTTGCGTTCAAAATTCCTTGTAGAAAGAAGAATTTAAC
ATTACGGCAATGATAAATCCCGAACGTTCGGATTTTAAGCATGGTAACCTGAACTTTTTTATGGCAACTTTAGGTCACGT
GAGGTTGGTAAACATTGGAATTTTCTGGGAAAAAAATGAACTGGAACAAAGTTGCCATGTCTTAACAACTAAAATTGCCA
CCTCGCGTCAATTAAAGTTGTCATGTAAAAACGTTCGGGATGAAATGCTTAATCCGAACATTTAGATTTTATCGGGGTCC
TAACATTAATAGTGGCACTCCCTCTCTTTCGTGTGTTTATGGAGTTTTTTTACCACATGATGTTATACAGGTTTTTTACC
ACGTATAACTGAAATATTTTTCACAGGGCCTTCCTTCTTTCTACTTCCTCCATTCCACAATATATTGCGCCCTGCATTTT
TCAAGAACTAAGTTTG
>chr6D_1
TGGCGAGGTGGCGACGCCGACTCCTCCTTGACGCGGGCTCGCGGTGGTGAAGGCGGCGCCAGATTGTGGTACTAGAGCGA
TCACTTGATCATGAGCTCCATCTACGGAGGCGCTTCTGCCGCTCCTCCTCGTCGCCGGACAAGATGGCGAACCCCCTCCT
TCTCGGAGGAGCCGACCC-TTAGTCGTGGAGGTCGATGGCCCGGAGAGCGACGGTTGTGACACCAAGGTCCGGAGCCGCT
ACCTGCCGGCACGAAGAACTACGACTTCGGCATCGTCAACATCTGTGAGCGAAGACCGAGAGGGGTAGCCATAATGTGAG
CGGAGAGGAGAGGTGGTGTGGTGTAGACGACATTGGAACCGTGCTTAAATAGACGCAACCAGACAAACGGACGGGAAGCT
G---------TGGCGCACCAGCCGGAGTAGACTTCTCGATTGTCATGTTGACCTTAAAGCGGCGTCGCCCGCTCGTCCGG
TCTTGTCGCTCTGACTGGCATCAATGTCGTGTGGGAGTCACGTCCATTCTGGAACAAGCTGAACGGCATGAATGCATGGC
GACCGCTTCACGCGGAGAGGGTTTTGGGATGGGACCTGGTGGTCGGGCGTGTACGTGTCGGCGGTCCCAACGCCATCAAA
GCTCC-CCTAATTTGTGTCTTGCTTGCAGAATTTCGGA-AAACCAAACACGTCTATAGACCGATGTGGTATCGCGTTGGA
TGACTTGTAGCGTTTGCACATATCGGTCTGAAAGATTTGTGTACATTTTAGTCCGCGTTGGAA---AAGGGAGGACGTTG
AAAGATTGCACGGGTAGACACGTCAGGCAAGGTCCCCGTATAGATTTTCCCGAAAAATCAAACGCTTCCTCTACATGTTC
CGTACCGCAGCACACATACTCCTCACTCTTTATAAGCACCAACCCCCTCCCCTGAAAGAAAAGATCTCGCACTCGAAGCA
GAGAGGAGCTAGGAGAGAGTTTGATTAGCTAGCGAGAAGATAGGCATCCCCTTCATGGCTGGCCTGAGCGTTCTCCTAGA
GACCCAGGAGAGCAACTCCATCAAGGCCAAGATCATCAGCAAGGCCACCCTCCATAGCCCCAAGATCTCCTCATCCCCTT
GGTCACCGGCAGCGAGGCCCACCGCAAGCACGGGTTCCTTCTTGCAGCGCTGCTTGCTGTGCCACAAGGATCTAGCCGAG
AACAATGACATCTACATGTACAGGTTAGCTAGG----TTGCGCGTGCAGCTGCATCAAGAAACTACCTCGTATATAATCG
ATGCACAACCGATCTAGTTAGTTTGTTCGTTCATG----TCTGATGTAGATCCATGGTACTACTGCAGAGGTGACAAGGC
GTTCTGCAGCGTGGAGTGCCGGTGCAGGCAGATCTTCATCGACGAGGACGCCGGCAGCAGCTTCTGCGCCAAGGGCGCCT
CCACCGCCGCCGTGCGGTCCGGCCGCCGCGCCACTGCCACCGGCGGCGGCGTGAGCTTCGCGTACTGATGTGCTACCTC-
------CAACACCAAGCAACCGGATGCACGTAGTGCTAGCACGTAACGTACGTGTGCAAAAGCAAGAAGAAAAGAAAAGA
GAGCTGTTTAAAGAATGGAGTTAAG---TACCGCCGTTATGTGACAGCTCGTCGGCGGGGGCCCACAAGCGACGGGGAGC
GTACGTGTCTCATGGCCGTACCTAACGGATAAGATGGCCGGACAGCTGGCCCCACCTGACGCGGATCAGGATCCAGAAAA
CTGACGACACTTTTTTT--ATTCTTTATTATCAT---ATATCACGTCTCTCCTCTCT----TCGGTGGGGATTAGCTTCT
GCGCGAAGATCAACTAC---------------------------------------------------------------
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>chr6A_1
TGGCGAGGTGGAGACGCCGAATCCTCCTTGACGCGG-CTCGTGGTGGTGAAGGCGGCGCCGGATTGTGGTACTAGAGCGA
TCACTTGATCATGAACTCCATCTACGGAGGCACGTCTGATGCTGCTCCTCGTCGCCGGACAAGATGACGAACCCCCTCCT
TCTCGGAGGAGCCGACCC-TTAATCGTGGAGGTCGATGGCCCTGAGAGCGATGGCTATGACACCAAGGTCCAGAGCCGCC
ACCTGCCGGCGCGAAGAACTACGACTTCGGCATCGTCAACATCTATGAGCGAAGACCGAGAGGAGTAGCCATAATGTGAG
CGGAGAGGAGAGGTGGTGTGGTGTAGACGGCATTGGAACCGTGCTTAAATAGACGCGACCGGACAAACGGACGGGAAGCT
GGCTTCAATATGGCACACCAGCTGGAGTAGGCTTCTCGATTGCCCCGTCGACATTAAAGCGGCCTCGCCCGCCCGTCCGG
TCTTCTCGCTCTGACCGACATCAATGTCGTGTAGGAATCACGTCCGCACTGGAACAGGCTGACCGGCATGAATGCACGAC
GATCACTTCGCGCGGAGAGGGTTTTAGGGTGGGACCTGGTGGTCAGGCGTGTACGTGTCGGTGGTCCCAACGCCATCAAA
GCTCCGCCTAATTTGTGTCTTGCTTGCAGAATTTCGAA-AAACCAAACACGTCCATAGACCGATGTGGTATCCTGTCGGA
TGACTTGCAGCGTCCGGACATGTTGGTCCGAACGATTCGCGGACATTTTGAGGGTACATGTTATAGAAGGGAGGCCGTTG
AAAGATCGCACGGGTAGACACGTCAGGGAAGGTCCCCGTATAGATTTTCCCAAAAAATCAAACGCTTCCTCTACATGTTC
AATACCGCAGCACACACACTCCTCACTCTTTATAAGCACCAACCCCCTCCCTTGAAAGAAAAGATCTCGCACTCGAAGTA
GAGAGGAGCTAGGAGAGAGTTTGATTAGCTAGCGAGAAGATAGGCATCCCCTTCATGGCTGGCCTGAGCGTTCTCCTAGA
GACCCACGAGAGCAACTCCATCAAGGCCAAGATCATCAGCAAGGCCACTCTCCATAGCCCCAAGATCTCCTCGTCCCCTT
GGTCGCCGGCAGCGAGGCCCACCGCAAGCACGGGTTCCTTCTTGCAGCGCTGCTTGCTGTGCCACAAGGATCTAGCCGAG
AACAATGACATCTACATGTACAGGTTAGCTAGCTAGATTGCGCGTGCAGCTGCATCAAGAAGCTACCTCCTATATAATCG
ATGCACAACCGATCTAGCTAGTTTGTTCGTTCATG----TCTGATGTAGATCCATGGTACTACTGCAGAGGTGACAAGGC
GTTCTGCAGCGTGGAGTGCCGGTGCAGGCAGATCTTCATGGACGAGGACGCCGGCAGCAGCTTCTGCGCCAAGGGCGCCT
CCACCGCCGCCGTGCGGTCCGGCCGCCGCGCCAGTGCCACCGGCGGCGGCGTGAGCTTCGCGTTCTGATGTGCTGCCTC-
------CAACACCAAGCAACCGGATGCACTTAGTGCTAGCACGTAACGTACGTGTGCAAAAGCAAGAAGAAAAGAAAAGA
GAGCGGTTTAAAGAATGGAGTTAAGTACTACCGCCGTTATGTGACAGCTCGTCGGCAGGGGCCCACAGGCGACGGGGAGC
GTACGTGTCTCATGGCCGTACCTAACGGATAAGATGGCCCGACAGCTGGCCCCACCTGACGCGGATCAGGATCCAGTAAA
CTGACGACACTTTTTTT--ATTCTTTTAT----TATCATATCACGTCTCTCCTCTCT----TCGGTGGGGATTAGCTTCT
GCGCGAAGATCAACTAGAACTTACTGTTAATCATGGTGAGAGGATGAGCTGACTGAGGCAGCTTGCAATCTTTTTGTTGG
TAGCTTACCACGTCAGCCGCTTGGTGGCTGACTGAGGCGGCTGTGGATGTGGTTGTGTGATACGTACAAGGATGGAGTGA
TTGGGATAGAGAGTTTGACATGCCTGGCGCCTTGCGATTTTGTATTCTATTTCTGGGTGTAACAGTGCTAGCCGGCATTA
ATTGGTG----TATGTGGTTTGAAGCTTTGG---ATAAGAATTTTGCGTT------------------------------
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>SNPs
-------------------------------------------------------S------------------------
--S--------S-------------------------------------S----------S-------------------
----S-------------S----------------------------------S--------------------------
------S--------------S-----S-------------------------------------------------S--
---S----SS---S-----S--------------------------------S-SS------------------------
---------S-------------SS-------------S--------------------S--S---S-------------
------S--S-------------------------------SS-------------------------------------
---------------------------------------S-S----------------------------------S---
----------------S---------------------S---------S----S--------------------------
--------------------------------S-----------------------------SS----------------
--------------S--------------------------------S---S----------------------------
------------------------------------------------S---------------------------SS--
--------------------------------------------------------------------------S-----
-----------------------------------------------------------------S-------S------
--------------------------------S-----------------------------------------------
-------------------------------------------------------------------------------S
-------S-------S------------S-----SSSSS--------------S-----S--------------------
---------------------------------------------------------------------S----------
----------------------------S---------S-------------S------------------S-----S-S
SSSSSS------------------S-----------------------------------S-----------------S-
---------------S---------------------------------------------------S------------
---------S-S--S---------------------------S----------------S---------------S----
-------S--S------SS------------S--------------------SS--SSSSS-------------------
---S-----------------S--------S----------S-S------------------------------------
--------------------------------------S-----------------------------------------
---S------------------------------S-------------------------------------SS--SS-S
-SSS-SSSSSS---S---------S------SSS----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_262
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--CTGCTGGCGCGAAGAACTAT----------------------------------------------------------
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>reverse_1871
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------------------------------GCATGGTGAGAAGGTGAGCT------------------------------
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