Multiple sequence alignment - TraesCS6B01G210900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G210900 chr6B 100.000 2471 0 0 1 2471 279009551 279007081 0.000000e+00 4564.0
1 TraesCS6B01G210900 chr6B 88.272 324 32 5 1607 1925 599801490 599801168 1.390000e-102 383.0
2 TraesCS6B01G210900 chr6A 92.959 1122 60 9 463 1571 209783653 209782538 0.000000e+00 1616.0
3 TraesCS6B01G210900 chr6A 92.141 509 31 7 1968 2471 209766972 209766468 0.000000e+00 710.0
4 TraesCS6B01G210900 chr6A 84.783 322 41 5 1604 1917 1792696 1793017 1.430000e-82 316.0
5 TraesCS6B01G210900 chr6A 84.677 124 13 1 335 452 209783842 209783719 4.320000e-23 119.0
6 TraesCS6B01G210900 chr6D 93.559 885 47 8 576 1453 156429570 156428689 0.000000e+00 1310.0
7 TraesCS6B01G210900 chr6D 94.698 547 21 2 1927 2471 156428553 156428013 0.000000e+00 843.0
8 TraesCS6B01G210900 chr2B 88.889 324 24 6 1607 1919 448909840 448909518 2.980000e-104 388.0
9 TraesCS6B01G210900 chr2B 88.217 314 33 4 1607 1919 735524731 735525041 3.000000e-99 372.0
10 TraesCS6B01G210900 chr2B 88.136 59 6 1 445 503 670440243 670440186 4.410000e-08 69.4
11 TraesCS6B01G210900 chr3A 88.474 321 29 2 1607 1919 569638704 569638384 4.990000e-102 381.0
12 TraesCS6B01G210900 chr3B 87.730 326 31 3 1603 1919 700233636 700233311 3.000000e-99 372.0
13 TraesCS6B01G210900 chr5B 87.937 315 36 2 1608 1922 644946350 644946038 1.080000e-98 370.0
14 TraesCS6B01G210900 chr4B 87.037 324 34 3 1604 1919 621034748 621035071 2.340000e-95 359.0
15 TraesCS6B01G210900 chr7A 85.443 316 41 5 1604 1919 432148720 432149030 8.520000e-85 324.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G210900 chr6B 279007081 279009551 2470 True 4564.0 4564 100.0000 1 2471 1 chr6B.!!$R1 2470
1 TraesCS6B01G210900 chr6A 209782538 209783842 1304 True 867.5 1616 88.8180 335 1571 2 chr6A.!!$R2 1236
2 TraesCS6B01G210900 chr6A 209766468 209766972 504 True 710.0 710 92.1410 1968 2471 1 chr6A.!!$R1 503
3 TraesCS6B01G210900 chr6D 156428013 156429570 1557 True 1076.5 1310 94.1285 576 2471 2 chr6D.!!$R1 1895

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
828 890 0.03438 ACTACCTCCAGCTAGCGACA 60.034 55.0 9.55 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1828 1914 0.106894 GGTTCGGATAGGGAAGCAGG 59.893 60.0 0.0 0.0 40.59 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.109847 TCTTTGGTGGACCTGCAAC 57.890 52.632 0.00 0.00 36.82 4.17
19 20 0.550914 TCTTTGGTGGACCTGCAACT 59.449 50.000 0.00 0.00 36.82 3.16
20 21 0.954452 CTTTGGTGGACCTGCAACTC 59.046 55.000 0.00 0.00 36.82 3.01
21 22 0.467290 TTTGGTGGACCTGCAACTCC 60.467 55.000 2.79 2.79 36.82 3.85
22 23 1.352622 TTGGTGGACCTGCAACTCCT 61.353 55.000 10.06 0.00 36.82 3.69
23 24 1.302832 GGTGGACCTGCAACTCCTG 60.303 63.158 10.06 0.00 0.00 3.86
24 25 1.451936 GTGGACCTGCAACTCCTGT 59.548 57.895 10.06 0.00 0.00 4.00
25 26 0.685097 GTGGACCTGCAACTCCTGTA 59.315 55.000 10.06 0.00 0.00 2.74
26 27 1.279271 GTGGACCTGCAACTCCTGTAT 59.721 52.381 10.06 0.00 0.00 2.29
27 28 1.278985 TGGACCTGCAACTCCTGTATG 59.721 52.381 10.06 0.00 0.00 2.39
28 29 1.555075 GGACCTGCAACTCCTGTATGA 59.445 52.381 2.55 0.00 0.00 2.15
29 30 2.027192 GGACCTGCAACTCCTGTATGAA 60.027 50.000 2.55 0.00 0.00 2.57
30 31 3.559171 GGACCTGCAACTCCTGTATGAAA 60.559 47.826 2.55 0.00 0.00 2.69
31 32 3.412386 ACCTGCAACTCCTGTATGAAAC 58.588 45.455 0.00 0.00 0.00 2.78
32 33 3.073062 ACCTGCAACTCCTGTATGAAACT 59.927 43.478 0.00 0.00 0.00 2.66
33 34 3.438087 CCTGCAACTCCTGTATGAAACTG 59.562 47.826 0.00 0.00 0.00 3.16
34 35 3.411446 TGCAACTCCTGTATGAAACTGG 58.589 45.455 0.00 0.00 46.05 4.00
35 36 3.181445 TGCAACTCCTGTATGAAACTGGT 60.181 43.478 0.00 0.00 45.17 4.00
36 37 3.821033 GCAACTCCTGTATGAAACTGGTT 59.179 43.478 1.68 0.00 45.17 3.67
37 38 4.083271 GCAACTCCTGTATGAAACTGGTTC 60.083 45.833 0.00 0.00 45.17 3.62
50 51 6.033341 TGAAACTGGTTCAAAGTGAATTTCG 58.967 36.000 5.50 0.00 43.43 3.46
51 52 5.576447 AACTGGTTCAAAGTGAATTTCGT 57.424 34.783 0.00 0.00 38.79 3.85
52 53 4.920376 ACTGGTTCAAAGTGAATTTCGTG 58.080 39.130 0.00 0.00 38.79 4.35
53 54 4.638421 ACTGGTTCAAAGTGAATTTCGTGA 59.362 37.500 0.00 0.00 38.79 4.35
54 55 5.124776 ACTGGTTCAAAGTGAATTTCGTGAA 59.875 36.000 0.00 0.00 38.79 3.18
55 56 6.142818 TGGTTCAAAGTGAATTTCGTGAAT 57.857 33.333 0.00 0.00 38.79 2.57
56 57 6.568869 TGGTTCAAAGTGAATTTCGTGAATT 58.431 32.000 0.00 0.35 38.79 2.17
57 58 6.475076 TGGTTCAAAGTGAATTTCGTGAATTG 59.525 34.615 4.66 0.00 38.79 2.32
58 59 6.695278 GGTTCAAAGTGAATTTCGTGAATTGA 59.305 34.615 4.66 0.00 38.79 2.57
59 60 7.221838 GGTTCAAAGTGAATTTCGTGAATTGAA 59.778 33.333 4.66 9.56 38.79 2.69
60 61 8.591312 GTTCAAAGTGAATTTCGTGAATTGAAA 58.409 29.630 12.81 0.00 38.79 2.69
61 62 8.114359 TCAAAGTGAATTTCGTGAATTGAAAC 57.886 30.769 4.66 2.14 38.06 2.78
62 63 7.973388 TCAAAGTGAATTTCGTGAATTGAAACT 59.027 29.630 4.66 3.83 38.06 2.66
63 64 7.684062 AAGTGAATTTCGTGAATTGAAACTG 57.316 32.000 4.66 0.00 38.06 3.16
64 65 7.026631 AGTGAATTTCGTGAATTGAAACTGA 57.973 32.000 4.66 0.00 38.06 3.41
65 66 7.651808 AGTGAATTTCGTGAATTGAAACTGAT 58.348 30.769 4.66 0.00 38.06 2.90
66 67 8.137437 AGTGAATTTCGTGAATTGAAACTGATT 58.863 29.630 4.66 0.00 38.06 2.57
67 68 8.420189 GTGAATTTCGTGAATTGAAACTGATTC 58.580 33.333 4.66 0.00 38.06 2.52
68 69 8.352201 TGAATTTCGTGAATTGAAACTGATTCT 58.648 29.630 4.66 0.00 38.06 2.40
69 70 8.511465 AATTTCGTGAATTGAAACTGATTCTG 57.489 30.769 0.00 0.00 38.08 3.02
70 71 6.859420 TTCGTGAATTGAAACTGATTCTGA 57.141 33.333 0.00 0.00 38.92 3.27
71 72 6.228273 TCGTGAATTGAAACTGATTCTGAC 57.772 37.500 0.00 0.00 38.92 3.51
72 73 5.075448 CGTGAATTGAAACTGATTCTGACG 58.925 41.667 0.00 0.00 38.92 4.35
73 74 5.385617 GTGAATTGAAACTGATTCTGACGG 58.614 41.667 0.00 0.00 38.92 4.79
74 75 5.179368 GTGAATTGAAACTGATTCTGACGGA 59.821 40.000 0.00 0.00 38.92 4.69
75 76 5.409520 TGAATTGAAACTGATTCTGACGGAG 59.590 40.000 0.00 0.00 38.92 4.63
76 77 4.336889 TTGAAACTGATTCTGACGGAGT 57.663 40.909 0.00 0.00 41.06 3.85
77 78 3.653344 TGAAACTGATTCTGACGGAGTG 58.347 45.455 0.00 0.00 39.17 3.51
78 79 2.996621 GAAACTGATTCTGACGGAGTGG 59.003 50.000 0.00 0.00 36.36 4.00
79 80 3.306088 GAAACTGATTCTGACGGAGTGGA 60.306 47.826 0.00 0.00 36.36 4.02
80 81 5.148234 GAAACTGATTCTGACGGAGTGGAG 61.148 50.000 0.00 0.00 36.36 3.86
89 90 3.483587 GGAGTGGAGCAGTCCCAA 58.516 61.111 0.00 0.00 45.46 4.12
90 91 1.761174 GGAGTGGAGCAGTCCCAAA 59.239 57.895 0.00 0.00 45.46 3.28
91 92 0.606673 GGAGTGGAGCAGTCCCAAAC 60.607 60.000 0.00 0.00 45.46 2.93
92 93 0.108585 GAGTGGAGCAGTCCCAAACA 59.891 55.000 0.00 0.00 43.15 2.83
93 94 0.550914 AGTGGAGCAGTCCCAAACAA 59.449 50.000 0.00 0.00 43.15 2.83
94 95 1.064017 AGTGGAGCAGTCCCAAACAAA 60.064 47.619 0.00 0.00 43.15 2.83
95 96 1.067060 GTGGAGCAGTCCCAAACAAAC 59.933 52.381 0.00 0.00 43.15 2.93
96 97 0.673985 GGAGCAGTCCCAAACAAACC 59.326 55.000 0.00 0.00 36.76 3.27
97 98 0.673985 GAGCAGTCCCAAACAAACCC 59.326 55.000 0.00 0.00 0.00 4.11
98 99 0.261696 AGCAGTCCCAAACAAACCCT 59.738 50.000 0.00 0.00 0.00 4.34
99 100 1.119684 GCAGTCCCAAACAAACCCTT 58.880 50.000 0.00 0.00 0.00 3.95
100 101 2.091555 AGCAGTCCCAAACAAACCCTTA 60.092 45.455 0.00 0.00 0.00 2.69
101 102 2.897326 GCAGTCCCAAACAAACCCTTAT 59.103 45.455 0.00 0.00 0.00 1.73
102 103 4.083565 GCAGTCCCAAACAAACCCTTATA 58.916 43.478 0.00 0.00 0.00 0.98
103 104 4.709886 GCAGTCCCAAACAAACCCTTATAT 59.290 41.667 0.00 0.00 0.00 0.86
104 105 5.889289 GCAGTCCCAAACAAACCCTTATATA 59.111 40.000 0.00 0.00 0.00 0.86
105 106 6.549736 GCAGTCCCAAACAAACCCTTATATAT 59.450 38.462 0.00 0.00 0.00 0.86
106 107 7.722285 GCAGTCCCAAACAAACCCTTATATATA 59.278 37.037 0.00 0.00 0.00 0.86
107 108 9.063615 CAGTCCCAAACAAACCCTTATATATAC 57.936 37.037 0.00 0.00 0.00 1.47
108 109 8.783903 AGTCCCAAACAAACCCTTATATATACA 58.216 33.333 0.00 0.00 0.00 2.29
109 110 9.411189 GTCCCAAACAAACCCTTATATATACAA 57.589 33.333 0.00 0.00 0.00 2.41
229 230 8.990163 TTGATCAAAGTTTAAGAGGGTTAACT 57.010 30.769 5.45 0.00 32.52 2.24
230 231 8.617290 TGATCAAAGTTTAAGAGGGTTAACTC 57.383 34.615 5.42 0.21 37.77 3.01
244 245 9.775854 AGAGGGTTAACTCTTTAGAAAACTTAC 57.224 33.333 9.93 0.00 45.21 2.34
245 246 9.551734 GAGGGTTAACTCTTTAGAAAACTTACA 57.448 33.333 9.93 0.00 34.65 2.41
246 247 9.334947 AGGGTTAACTCTTTAGAAAACTTACAC 57.665 33.333 0.85 0.00 0.00 2.90
247 248 8.278408 GGGTTAACTCTTTAGAAAACTTACACG 58.722 37.037 5.42 0.00 0.00 4.49
248 249 7.795734 GGTTAACTCTTTAGAAAACTTACACGC 59.204 37.037 5.42 0.00 0.00 5.34
249 250 6.913873 AACTCTTTAGAAAACTTACACGCA 57.086 33.333 0.00 0.00 0.00 5.24
250 251 6.283161 ACTCTTTAGAAAACTTACACGCAC 57.717 37.500 0.00 0.00 0.00 5.34
251 252 6.047231 ACTCTTTAGAAAACTTACACGCACT 58.953 36.000 0.00 0.00 0.00 4.40
252 253 7.205297 ACTCTTTAGAAAACTTACACGCACTA 58.795 34.615 0.00 0.00 0.00 2.74
253 254 7.871463 ACTCTTTAGAAAACTTACACGCACTAT 59.129 33.333 0.00 0.00 0.00 2.12
254 255 8.014322 TCTTTAGAAAACTTACACGCACTATG 57.986 34.615 0.00 0.00 0.00 2.23
255 256 7.654520 TCTTTAGAAAACTTACACGCACTATGT 59.345 33.333 0.00 0.00 0.00 2.29
256 257 5.840940 AGAAAACTTACACGCACTATGTC 57.159 39.130 0.00 0.00 0.00 3.06
257 258 5.294356 AGAAAACTTACACGCACTATGTCA 58.706 37.500 0.00 0.00 0.00 3.58
258 259 4.985044 AAACTTACACGCACTATGTCAC 57.015 40.909 0.00 0.00 0.00 3.67
259 260 2.592194 ACTTACACGCACTATGTCACG 58.408 47.619 0.00 0.00 0.00 4.35
260 261 2.227149 ACTTACACGCACTATGTCACGA 59.773 45.455 0.00 0.00 0.00 4.35
261 262 2.537639 TACACGCACTATGTCACGAG 57.462 50.000 0.00 0.00 0.00 4.18
262 263 0.879090 ACACGCACTATGTCACGAGA 59.121 50.000 0.00 0.00 0.00 4.04
263 264 1.135660 ACACGCACTATGTCACGAGAG 60.136 52.381 0.00 0.00 0.00 3.20
264 265 0.179161 ACGCACTATGTCACGAGAGC 60.179 55.000 0.00 0.00 0.00 4.09
265 266 1.196749 CGCACTATGTCACGAGAGCG 61.197 60.000 11.98 11.98 44.14 5.03
266 267 0.098905 GCACTATGTCACGAGAGCGA 59.901 55.000 0.00 0.00 41.64 4.93
267 268 1.816370 CACTATGTCACGAGAGCGAC 58.184 55.000 0.00 0.00 43.21 5.19
268 269 1.398739 CACTATGTCACGAGAGCGACT 59.601 52.381 0.00 0.00 43.30 4.18
269 270 1.666700 ACTATGTCACGAGAGCGACTC 59.333 52.381 0.00 4.31 43.30 3.36
270 271 1.666189 CTATGTCACGAGAGCGACTCA 59.334 52.381 12.77 0.00 43.30 3.41
271 272 0.169230 ATGTCACGAGAGCGACTCAC 59.831 55.000 12.77 2.77 43.30 3.51
272 273 1.164041 TGTCACGAGAGCGACTCACA 61.164 55.000 12.77 7.71 43.30 3.58
273 274 0.726452 GTCACGAGAGCGACTCACAC 60.726 60.000 12.77 4.00 45.14 3.82
274 275 1.794003 CACGAGAGCGACTCACACG 60.794 63.158 12.77 11.94 45.14 4.49
275 276 2.252346 ACGAGAGCGACTCACACGT 61.252 57.895 12.77 12.42 45.14 4.49
276 277 1.082038 CGAGAGCGACTCACACGTT 60.082 57.895 12.77 0.00 45.14 3.99
277 278 1.330779 CGAGAGCGACTCACACGTTG 61.331 60.000 12.77 0.00 45.14 4.10
278 279 1.609840 GAGAGCGACTCACACGTTGC 61.610 60.000 9.09 0.00 44.36 4.17
279 280 1.949133 GAGCGACTCACACGTTGCA 60.949 57.895 6.01 0.00 44.89 4.08
280 281 2.147204 GAGCGACTCACACGTTGCAC 62.147 60.000 6.01 0.00 44.89 4.57
303 304 3.572539 CGCGCGCTCTCTCTCTCT 61.573 66.667 30.48 0.00 0.00 3.10
304 305 2.327940 GCGCGCTCTCTCTCTCTC 59.672 66.667 26.67 0.00 0.00 3.20
305 306 2.180204 GCGCGCTCTCTCTCTCTCT 61.180 63.158 26.67 0.00 0.00 3.10
306 307 1.934463 CGCGCTCTCTCTCTCTCTC 59.066 63.158 5.56 0.00 0.00 3.20
307 308 1.498865 CGCGCTCTCTCTCTCTCTCC 61.499 65.000 5.56 0.00 0.00 3.71
308 309 1.166531 GCGCTCTCTCTCTCTCTCCC 61.167 65.000 0.00 0.00 0.00 4.30
309 310 0.469917 CGCTCTCTCTCTCTCTCCCT 59.530 60.000 0.00 0.00 0.00 4.20
310 311 1.541233 CGCTCTCTCTCTCTCTCCCTC 60.541 61.905 0.00 0.00 0.00 4.30
311 312 1.771255 GCTCTCTCTCTCTCTCCCTCT 59.229 57.143 0.00 0.00 0.00 3.69
312 313 2.224402 GCTCTCTCTCTCTCTCCCTCTC 60.224 59.091 0.00 0.00 0.00 3.20
313 314 3.041211 CTCTCTCTCTCTCTCCCTCTCA 58.959 54.545 0.00 0.00 0.00 3.27
314 315 3.455910 CTCTCTCTCTCTCTCCCTCTCAA 59.544 52.174 0.00 0.00 0.00 3.02
315 316 4.047166 TCTCTCTCTCTCTCCCTCTCAAT 58.953 47.826 0.00 0.00 0.00 2.57
316 317 4.478317 TCTCTCTCTCTCTCCCTCTCAATT 59.522 45.833 0.00 0.00 0.00 2.32
317 318 5.044179 TCTCTCTCTCTCTCCCTCTCAATTT 60.044 44.000 0.00 0.00 0.00 1.82
318 319 5.588845 TCTCTCTCTCTCCCTCTCAATTTT 58.411 41.667 0.00 0.00 0.00 1.82
319 320 6.022315 TCTCTCTCTCTCCCTCTCAATTTTT 58.978 40.000 0.00 0.00 0.00 1.94
355 356 5.799827 ATCTCTCCCTCAAGTAATGCTAC 57.200 43.478 0.00 0.00 0.00 3.58
387 388 3.392882 AGTTTTACAGGACGTTTACGGG 58.607 45.455 7.24 0.00 44.95 5.28
393 394 1.067354 CAGGACGTTTACGGGCTAAGT 60.067 52.381 7.24 0.00 44.95 2.24
405 406 1.768870 GGGCTAAGTTGAGATGGGCTA 59.231 52.381 0.00 0.00 0.00 3.93
424 431 4.691216 GGCTATTAGTTAAGGATGAAGCGG 59.309 45.833 0.00 0.00 0.00 5.52
452 459 2.725221 CTGAAAATCAGGGGGAGAGG 57.275 55.000 0.00 0.00 40.71 3.69
453 460 1.213926 CTGAAAATCAGGGGGAGAGGG 59.786 57.143 0.00 0.00 40.71 4.30
454 461 0.553333 GAAAATCAGGGGGAGAGGGG 59.447 60.000 0.00 0.00 0.00 4.79
455 462 0.178801 AAAATCAGGGGGAGAGGGGT 60.179 55.000 0.00 0.00 0.00 4.95
456 463 0.178801 AAATCAGGGGGAGAGGGGTT 60.179 55.000 0.00 0.00 0.00 4.11
457 464 0.728843 AATCAGGGGGAGAGGGGTTA 59.271 55.000 0.00 0.00 0.00 2.85
460 467 0.691413 CAGGGGGAGAGGGGTTAGTC 60.691 65.000 0.00 0.00 0.00 2.59
461 468 1.384222 GGGGGAGAGGGGTTAGTCC 60.384 68.421 0.00 0.00 0.00 3.85
501 563 5.615925 ATCCTCCGTAAGTCTAGCATTTT 57.384 39.130 0.00 0.00 0.00 1.82
511 573 7.431084 CGTAAGTCTAGCATTTTTCTCTCTCTC 59.569 40.741 0.00 0.00 0.00 3.20
517 579 5.723295 AGCATTTTTCTCTCTCTCTCTGAC 58.277 41.667 0.00 0.00 0.00 3.51
537 599 5.853936 TGACGAGGAACCCATCTATTATTG 58.146 41.667 0.00 0.00 0.00 1.90
538 600 4.642429 ACGAGGAACCCATCTATTATTGC 58.358 43.478 0.00 0.00 0.00 3.56
544 606 3.335748 ACCCATCTATTATTGCCCCTCA 58.664 45.455 0.00 0.00 0.00 3.86
550 612 6.385176 CCATCTATTATTGCCCCTCATCTCTA 59.615 42.308 0.00 0.00 0.00 2.43
564 626 6.111382 CCTCATCTCTATGTTGAGAGCAAAA 58.889 40.000 0.90 0.00 44.98 2.44
574 636 4.142622 TGTTGAGAGCAAAAGTGACACTTG 60.143 41.667 21.24 11.87 38.66 3.16
644 706 6.307915 CGTGTCTATAACTCTACATCATCCG 58.692 44.000 0.00 0.00 0.00 4.18
720 782 3.818180 AGAACATCAGAATGGCATCTCC 58.182 45.455 0.00 0.00 37.19 3.71
803 865 1.774894 AAGCCGCCAACTACCTCCAA 61.775 55.000 0.00 0.00 0.00 3.53
806 868 2.388232 CGCCAACTACCTCCAACGC 61.388 63.158 0.00 0.00 0.00 4.84
807 869 1.003718 GCCAACTACCTCCAACGCT 60.004 57.895 0.00 0.00 0.00 5.07
808 870 0.248289 GCCAACTACCTCCAACGCTA 59.752 55.000 0.00 0.00 0.00 4.26
809 871 1.338389 GCCAACTACCTCCAACGCTAA 60.338 52.381 0.00 0.00 0.00 3.09
811 873 2.028385 CCAACTACCTCCAACGCTAACT 60.028 50.000 0.00 0.00 0.00 2.24
812 874 3.194116 CCAACTACCTCCAACGCTAACTA 59.806 47.826 0.00 0.00 0.00 2.24
814 876 2.757314 ACTACCTCCAACGCTAACTACC 59.243 50.000 0.00 0.00 0.00 3.18
815 877 1.934410 ACCTCCAACGCTAACTACCT 58.066 50.000 0.00 0.00 0.00 3.08
817 879 1.136500 CCTCCAACGCTAACTACCTCC 59.864 57.143 0.00 0.00 0.00 4.30
818 880 1.822990 CTCCAACGCTAACTACCTCCA 59.177 52.381 0.00 0.00 0.00 3.86
819 881 1.822990 TCCAACGCTAACTACCTCCAG 59.177 52.381 0.00 0.00 0.00 3.86
820 882 1.641577 CAACGCTAACTACCTCCAGC 58.358 55.000 0.00 0.00 0.00 4.85
821 883 1.204941 CAACGCTAACTACCTCCAGCT 59.795 52.381 0.00 0.00 31.74 4.24
822 884 2.426024 CAACGCTAACTACCTCCAGCTA 59.574 50.000 0.00 0.00 31.74 3.32
823 885 2.299521 ACGCTAACTACCTCCAGCTAG 58.700 52.381 0.00 0.00 31.74 3.42
824 886 1.001158 CGCTAACTACCTCCAGCTAGC 60.001 57.143 6.62 6.62 37.03 3.42
826 888 2.573369 CTAACTACCTCCAGCTAGCGA 58.427 52.381 9.55 0.07 0.00 4.93
827 889 1.104630 AACTACCTCCAGCTAGCGAC 58.895 55.000 9.55 0.00 0.00 5.19
828 890 0.034380 ACTACCTCCAGCTAGCGACA 60.034 55.000 9.55 0.00 0.00 4.35
829 891 0.382515 CTACCTCCAGCTAGCGACAC 59.617 60.000 9.55 0.00 0.00 3.67
830 892 1.035932 TACCTCCAGCTAGCGACACC 61.036 60.000 9.55 0.00 0.00 4.16
831 893 2.351244 CCTCCAGCTAGCGACACCA 61.351 63.158 9.55 0.00 0.00 4.17
832 894 1.591703 CTCCAGCTAGCGACACCAA 59.408 57.895 9.55 0.00 0.00 3.67
877 944 2.103538 GCTTGACCCGTCGCGATA 59.896 61.111 14.06 0.00 0.00 2.92
889 956 1.174078 TCGCGATACCGAAGCCCATA 61.174 55.000 3.71 0.00 38.22 2.74
913 980 6.578944 AGAACCAACGTGCTATATAATCACA 58.421 36.000 12.53 0.00 0.00 3.58
943 1010 1.682684 GGGGCTTCTCGTCTCCTCA 60.683 63.158 0.00 0.00 0.00 3.86
944 1011 1.045911 GGGGCTTCTCGTCTCCTCAT 61.046 60.000 0.00 0.00 0.00 2.90
954 1021 3.089874 CTCCTCATTCCGCCCCCA 61.090 66.667 0.00 0.00 0.00 4.96
972 1039 3.491652 GCGTCCTTCCTTCAGCGC 61.492 66.667 0.00 0.00 38.15 5.92
973 1040 3.181967 CGTCCTTCCTTCAGCGCG 61.182 66.667 0.00 0.00 0.00 6.86
974 1041 3.491652 GTCCTTCCTTCAGCGCGC 61.492 66.667 26.66 26.66 0.00 6.86
1011 1082 3.279434 GTTATTGCCGATGGAAACCTCT 58.721 45.455 0.00 0.00 0.00 3.69
1173 1250 2.663196 CGTCTGGGTGGGAAGGTC 59.337 66.667 0.00 0.00 0.00 3.85
1346 1426 1.666872 AAAACTTCGACGAGGGCGG 60.667 57.895 11.93 0.00 43.17 6.13
1445 1525 2.786495 CGGATGTAGCTCACCGCCT 61.786 63.158 0.00 0.00 40.39 5.52
1448 1528 3.723235 ATGTAGCTCACCGCCTGCG 62.723 63.158 4.20 4.20 40.39 5.18
1497 1577 2.503765 TCTTGTGAGGAGTTTGTGGACA 59.496 45.455 0.00 0.00 0.00 4.02
1546 1626 1.896465 GGTGTAGCTCAGACTGGTCTT 59.104 52.381 1.81 0.00 37.98 3.01
1547 1627 2.353208 GGTGTAGCTCAGACTGGTCTTG 60.353 54.545 1.81 0.00 37.98 3.02
1548 1628 2.297597 GTGTAGCTCAGACTGGTCTTGT 59.702 50.000 1.81 0.00 37.98 3.16
1549 1629 2.558795 TGTAGCTCAGACTGGTCTTGTC 59.441 50.000 1.81 0.00 37.98 3.18
1550 1630 2.008242 AGCTCAGACTGGTCTTGTCT 57.992 50.000 1.81 0.00 44.62 3.41
1553 1633 2.805099 GCTCAGACTGGTCTTGTCTTTG 59.195 50.000 1.81 0.00 42.21 2.77
1559 1645 4.884164 AGACTGGTCTTGTCTTTGGAAAAG 59.116 41.667 0.00 0.00 41.45 2.27
1561 1647 5.261216 ACTGGTCTTGTCTTTGGAAAAGAA 58.739 37.500 4.09 0.00 44.57 2.52
1567 1653 7.378728 GGTCTTGTCTTTGGAAAAGAAAATACG 59.621 37.037 5.94 0.00 44.57 3.06
1585 1671 3.416119 ACGACCATACGTACACATGAG 57.584 47.619 0.00 0.00 44.72 2.90
1586 1672 2.098607 ACGACCATACGTACACATGAGG 59.901 50.000 0.00 0.00 44.72 3.86
1587 1673 2.470821 GACCATACGTACACATGAGGC 58.529 52.381 0.00 0.00 0.00 4.70
1588 1674 1.138266 ACCATACGTACACATGAGGCC 59.862 52.381 0.00 0.00 0.00 5.19
1589 1675 1.412710 CCATACGTACACATGAGGCCT 59.587 52.381 3.86 3.86 0.00 5.19
1591 1677 2.953466 TACGTACACATGAGGCCTTC 57.047 50.000 6.77 0.10 0.00 3.46
1593 1679 1.066858 ACGTACACATGAGGCCTTCAG 60.067 52.381 6.77 1.60 39.68 3.02
1596 1682 0.035630 ACACATGAGGCCTTCAGCTC 60.036 55.000 6.77 0.00 43.05 4.09
1597 1683 0.035725 CACATGAGGCCTTCAGCTCA 60.036 55.000 6.77 0.00 43.05 4.26
1598 1684 0.252479 ACATGAGGCCTTCAGCTCAG 59.748 55.000 6.77 0.00 43.05 3.35
1600 1686 0.540923 ATGAGGCCTTCAGCTCAGAC 59.459 55.000 6.77 0.00 43.05 3.51
1601 1687 0.543883 TGAGGCCTTCAGCTCAGACT 60.544 55.000 6.77 0.00 43.05 3.24
1603 1689 0.612744 AGGCCTTCAGCTCAGACTTC 59.387 55.000 0.00 0.00 43.05 3.01
1604 1690 0.612744 GGCCTTCAGCTCAGACTTCT 59.387 55.000 0.00 0.00 43.05 2.85
1605 1691 1.405391 GGCCTTCAGCTCAGACTTCTC 60.405 57.143 0.00 0.00 43.05 2.87
1606 1692 1.274728 GCCTTCAGCTCAGACTTCTCA 59.725 52.381 0.00 0.00 38.99 3.27
1607 1693 2.674747 GCCTTCAGCTCAGACTTCTCAG 60.675 54.545 0.00 0.00 38.99 3.35
1608 1694 2.094078 CCTTCAGCTCAGACTTCTCAGG 60.094 54.545 0.00 0.00 0.00 3.86
1609 1695 1.554836 TCAGCTCAGACTTCTCAGGG 58.445 55.000 0.00 0.00 0.00 4.45
1610 1696 0.108233 CAGCTCAGACTTCTCAGGGC 60.108 60.000 0.00 0.00 0.00 5.19
1611 1697 0.543883 AGCTCAGACTTCTCAGGGCA 60.544 55.000 0.00 0.00 0.00 5.36
1612 1698 0.540923 GCTCAGACTTCTCAGGGCAT 59.459 55.000 0.00 0.00 0.00 4.40
1613 1699 1.743091 GCTCAGACTTCTCAGGGCATG 60.743 57.143 0.00 0.00 0.00 4.06
1614 1700 1.554160 CTCAGACTTCTCAGGGCATGT 59.446 52.381 0.00 0.00 0.00 3.21
1615 1701 2.762887 CTCAGACTTCTCAGGGCATGTA 59.237 50.000 0.00 0.00 0.00 2.29
1616 1702 2.497675 TCAGACTTCTCAGGGCATGTAC 59.502 50.000 0.00 0.00 0.00 2.90
1617 1703 2.234661 CAGACTTCTCAGGGCATGTACA 59.765 50.000 0.00 0.00 0.00 2.90
1618 1704 2.906389 AGACTTCTCAGGGCATGTACAA 59.094 45.455 0.00 0.00 0.00 2.41
1619 1705 3.521126 AGACTTCTCAGGGCATGTACAAT 59.479 43.478 0.00 0.00 0.00 2.71
1620 1706 3.614092 ACTTCTCAGGGCATGTACAATG 58.386 45.455 0.00 0.12 0.00 2.82
1621 1707 2.715749 TCTCAGGGCATGTACAATGG 57.284 50.000 0.00 0.00 0.00 3.16
1622 1708 1.915489 TCTCAGGGCATGTACAATGGT 59.085 47.619 0.00 0.00 0.00 3.55
1623 1709 2.019249 CTCAGGGCATGTACAATGGTG 58.981 52.381 0.00 0.00 0.00 4.17
1624 1710 1.105457 CAGGGCATGTACAATGGTGG 58.895 55.000 0.00 0.00 0.00 4.61
1625 1711 0.684153 AGGGCATGTACAATGGTGGC 60.684 55.000 11.25 11.25 36.52 5.01
1626 1712 0.969917 GGGCATGTACAATGGTGGCA 60.970 55.000 18.87 0.00 38.72 4.92
1627 1713 1.113788 GGCATGTACAATGGTGGCAT 58.886 50.000 14.01 0.00 37.14 4.40
1628 1714 2.305928 GGCATGTACAATGGTGGCATA 58.694 47.619 14.01 0.00 37.14 3.14
1629 1715 2.892852 GGCATGTACAATGGTGGCATAT 59.107 45.455 14.01 0.00 37.14 1.78
1630 1716 3.321682 GGCATGTACAATGGTGGCATATT 59.678 43.478 14.01 0.00 37.14 1.28
1631 1717 4.522405 GGCATGTACAATGGTGGCATATTA 59.478 41.667 14.01 0.00 37.14 0.98
1632 1718 5.010516 GGCATGTACAATGGTGGCATATTAA 59.989 40.000 14.01 0.00 37.14 1.40
1633 1719 6.295236 GGCATGTACAATGGTGGCATATTAAT 60.295 38.462 14.01 0.00 37.14 1.40
1634 1720 7.093988 GGCATGTACAATGGTGGCATATTAATA 60.094 37.037 14.01 0.00 37.14 0.98
1635 1721 7.754924 GCATGTACAATGGTGGCATATTAATAC 59.245 37.037 0.00 2.95 0.00 1.89
1636 1722 8.791675 CATGTACAATGGTGGCATATTAATACA 58.208 33.333 0.00 16.79 0.00 2.29
1637 1723 8.932434 TGTACAATGGTGGCATATTAATACAT 57.068 30.769 0.00 0.00 0.00 2.29
1655 1741 6.889301 ATACATATGCCTCATGACAAAAGG 57.111 37.500 1.58 2.76 0.00 3.11
1656 1742 4.603131 ACATATGCCTCATGACAAAAGGT 58.397 39.130 1.58 0.00 32.49 3.50
1657 1743 5.754782 ACATATGCCTCATGACAAAAGGTA 58.245 37.500 1.58 4.51 32.49 3.08
1658 1744 6.186957 ACATATGCCTCATGACAAAAGGTAA 58.813 36.000 1.58 0.00 32.49 2.85
1659 1745 6.835488 ACATATGCCTCATGACAAAAGGTAAT 59.165 34.615 1.58 5.63 32.49 1.89
1660 1746 7.342799 ACATATGCCTCATGACAAAAGGTAATT 59.657 33.333 1.58 0.00 32.49 1.40
1661 1747 6.610075 ATGCCTCATGACAAAAGGTAATTT 57.390 33.333 0.00 0.00 32.49 1.82
1662 1748 5.782047 TGCCTCATGACAAAAGGTAATTTG 58.218 37.500 0.00 0.00 44.11 2.32
1663 1749 5.538053 TGCCTCATGACAAAAGGTAATTTGA 59.462 36.000 6.76 0.00 41.73 2.69
1664 1750 6.041409 TGCCTCATGACAAAAGGTAATTTGAA 59.959 34.615 6.76 0.00 41.73 2.69
1665 1751 6.587608 GCCTCATGACAAAAGGTAATTTGAAG 59.412 38.462 6.76 0.00 41.73 3.02
1666 1752 7.661040 CCTCATGACAAAAGGTAATTTGAAGT 58.339 34.615 6.76 0.00 41.73 3.01
1667 1753 8.792633 CCTCATGACAAAAGGTAATTTGAAGTA 58.207 33.333 6.76 0.00 41.73 2.24
1694 1780 9.320295 TCTACATTTTATTTTTCTCCCCAATGT 57.680 29.630 0.00 0.00 37.39 2.71
1697 1783 9.942850 ACATTTTATTTTTCTCCCCAATGTAAG 57.057 29.630 0.00 0.00 33.02 2.34
1698 1784 8.882736 CATTTTATTTTTCTCCCCAATGTAAGC 58.117 33.333 0.00 0.00 0.00 3.09
1699 1785 7.790782 TTTATTTTTCTCCCCAATGTAAGCT 57.209 32.000 0.00 0.00 0.00 3.74
1700 1786 8.887264 TTTATTTTTCTCCCCAATGTAAGCTA 57.113 30.769 0.00 0.00 0.00 3.32
1701 1787 9.487442 TTTATTTTTCTCCCCAATGTAAGCTAT 57.513 29.630 0.00 0.00 0.00 2.97
1702 1788 7.588497 ATTTTTCTCCCCAATGTAAGCTATC 57.412 36.000 0.00 0.00 0.00 2.08
1703 1789 5.708736 TTTCTCCCCAATGTAAGCTATCA 57.291 39.130 0.00 0.00 0.00 2.15
1704 1790 4.689612 TCTCCCCAATGTAAGCTATCAC 57.310 45.455 0.00 0.00 0.00 3.06
1705 1791 4.298626 TCTCCCCAATGTAAGCTATCACT 58.701 43.478 0.00 0.00 0.00 3.41
1706 1792 5.464069 TCTCCCCAATGTAAGCTATCACTA 58.536 41.667 0.00 0.00 0.00 2.74
1707 1793 5.903010 TCTCCCCAATGTAAGCTATCACTAA 59.097 40.000 0.00 0.00 0.00 2.24
1708 1794 6.558775 TCTCCCCAATGTAAGCTATCACTAAT 59.441 38.462 0.00 0.00 0.00 1.73
1709 1795 6.533730 TCCCCAATGTAAGCTATCACTAATG 58.466 40.000 0.00 0.00 0.00 1.90
1710 1796 6.101150 TCCCCAATGTAAGCTATCACTAATGT 59.899 38.462 0.00 0.00 0.00 2.71
1711 1797 6.205464 CCCCAATGTAAGCTATCACTAATGTG 59.795 42.308 0.00 0.00 45.07 3.21
1712 1798 6.293626 CCCAATGTAAGCTATCACTAATGTGC 60.294 42.308 0.00 0.00 43.49 4.57
1713 1799 6.293626 CCAATGTAAGCTATCACTAATGTGCC 60.294 42.308 0.00 0.00 43.49 5.01
1714 1800 5.614324 TGTAAGCTATCACTAATGTGCCT 57.386 39.130 0.00 0.00 43.49 4.75
1715 1801 5.989477 TGTAAGCTATCACTAATGTGCCTT 58.011 37.500 0.00 0.00 43.49 4.35
1716 1802 7.119709 TGTAAGCTATCACTAATGTGCCTTA 57.880 36.000 0.00 0.00 43.49 2.69
1717 1803 7.735917 TGTAAGCTATCACTAATGTGCCTTAT 58.264 34.615 0.00 0.00 43.49 1.73
1718 1804 8.866093 TGTAAGCTATCACTAATGTGCCTTATA 58.134 33.333 0.00 0.00 43.49 0.98
1719 1805 9.706691 GTAAGCTATCACTAATGTGCCTTATAA 57.293 33.333 0.00 0.00 43.49 0.98
1721 1807 9.627123 AAGCTATCACTAATGTGCCTTATAAAA 57.373 29.630 0.00 0.00 43.49 1.52
1722 1808 9.627123 AGCTATCACTAATGTGCCTTATAAAAA 57.373 29.630 0.00 0.00 43.49 1.94
1756 1842 9.672673 AATAAAGACTTTAGTACACATGCATCT 57.327 29.630 12.93 0.00 0.00 2.90
1757 1843 7.602517 AAAGACTTTAGTACACATGCATCTC 57.397 36.000 0.00 0.00 0.00 2.75
1758 1844 6.537453 AGACTTTAGTACACATGCATCTCT 57.463 37.500 0.00 0.00 0.00 3.10
1759 1845 7.646548 AGACTTTAGTACACATGCATCTCTA 57.353 36.000 0.00 0.00 0.00 2.43
1760 1846 7.484975 AGACTTTAGTACACATGCATCTCTAC 58.515 38.462 0.00 0.00 0.00 2.59
1761 1847 7.340743 AGACTTTAGTACACATGCATCTCTACT 59.659 37.037 0.00 4.19 0.00 2.57
1762 1848 7.841956 ACTTTAGTACACATGCATCTCTACTT 58.158 34.615 0.00 0.00 0.00 2.24
1763 1849 8.314751 ACTTTAGTACACATGCATCTCTACTTT 58.685 33.333 0.00 0.00 0.00 2.66
1764 1850 9.155975 CTTTAGTACACATGCATCTCTACTTTT 57.844 33.333 0.00 0.00 0.00 2.27
1765 1851 8.703604 TTAGTACACATGCATCTCTACTTTTC 57.296 34.615 0.00 0.00 0.00 2.29
1766 1852 6.701340 AGTACACATGCATCTCTACTTTTCA 58.299 36.000 0.00 0.00 0.00 2.69
1767 1853 5.869753 ACACATGCATCTCTACTTTTCAC 57.130 39.130 0.00 0.00 0.00 3.18
1768 1854 5.555017 ACACATGCATCTCTACTTTTCACT 58.445 37.500 0.00 0.00 0.00 3.41
1769 1855 6.000219 ACACATGCATCTCTACTTTTCACTT 59.000 36.000 0.00 0.00 0.00 3.16
1770 1856 6.148480 ACACATGCATCTCTACTTTTCACTTC 59.852 38.462 0.00 0.00 0.00 3.01
1771 1857 6.148315 CACATGCATCTCTACTTTTCACTTCA 59.852 38.462 0.00 0.00 0.00 3.02
1772 1858 6.712095 ACATGCATCTCTACTTTTCACTTCAA 59.288 34.615 0.00 0.00 0.00 2.69
1773 1859 6.545504 TGCATCTCTACTTTTCACTTCAAC 57.454 37.500 0.00 0.00 0.00 3.18
1774 1860 5.470098 TGCATCTCTACTTTTCACTTCAACC 59.530 40.000 0.00 0.00 0.00 3.77
1775 1861 5.703130 GCATCTCTACTTTTCACTTCAACCT 59.297 40.000 0.00 0.00 0.00 3.50
1776 1862 6.205658 GCATCTCTACTTTTCACTTCAACCTT 59.794 38.462 0.00 0.00 0.00 3.50
1777 1863 7.255277 GCATCTCTACTTTTCACTTCAACCTTT 60.255 37.037 0.00 0.00 0.00 3.11
1778 1864 7.553881 TCTCTACTTTTCACTTCAACCTTTG 57.446 36.000 0.00 0.00 0.00 2.77
1779 1865 7.110155 TCTCTACTTTTCACTTCAACCTTTGT 58.890 34.615 0.00 0.00 0.00 2.83
1780 1866 7.280205 TCTCTACTTTTCACTTCAACCTTTGTC 59.720 37.037 0.00 0.00 0.00 3.18
1781 1867 5.975693 ACTTTTCACTTCAACCTTTGTCA 57.024 34.783 0.00 0.00 0.00 3.58
1782 1868 5.709966 ACTTTTCACTTCAACCTTTGTCAC 58.290 37.500 0.00 0.00 0.00 3.67
1783 1869 4.712122 TTTCACTTCAACCTTTGTCACC 57.288 40.909 0.00 0.00 0.00 4.02
1784 1870 2.285083 TCACTTCAACCTTTGTCACCG 58.715 47.619 0.00 0.00 0.00 4.94
1785 1871 1.333619 CACTTCAACCTTTGTCACCGG 59.666 52.381 0.00 0.00 0.00 5.28
1786 1872 1.210967 ACTTCAACCTTTGTCACCGGA 59.789 47.619 9.46 0.00 0.00 5.14
1787 1873 1.602377 CTTCAACCTTTGTCACCGGAC 59.398 52.381 9.46 0.00 44.57 4.79
1788 1874 0.179040 TCAACCTTTGTCACCGGACC 60.179 55.000 9.46 0.00 43.65 4.46
1789 1875 0.464735 CAACCTTTGTCACCGGACCA 60.465 55.000 9.46 0.00 43.65 4.02
1790 1876 0.464916 AACCTTTGTCACCGGACCAC 60.465 55.000 9.46 1.18 43.65 4.16
1791 1877 1.147376 CCTTTGTCACCGGACCACA 59.853 57.895 9.46 4.37 43.65 4.17
1792 1878 1.164041 CCTTTGTCACCGGACCACAC 61.164 60.000 9.46 0.00 43.65 3.82
1793 1879 0.179056 CTTTGTCACCGGACCACACT 60.179 55.000 9.46 0.00 43.65 3.55
1794 1880 0.253610 TTTGTCACCGGACCACACTT 59.746 50.000 9.46 0.00 43.65 3.16
1795 1881 0.253610 TTGTCACCGGACCACACTTT 59.746 50.000 9.46 0.00 43.65 2.66
1796 1882 0.253610 TGTCACCGGACCACACTTTT 59.746 50.000 9.46 0.00 43.65 2.27
1797 1883 1.340211 TGTCACCGGACCACACTTTTT 60.340 47.619 9.46 0.00 43.65 1.94
1798 1884 1.332686 GTCACCGGACCACACTTTTTC 59.667 52.381 9.46 0.00 38.12 2.29
1799 1885 1.210967 TCACCGGACCACACTTTTTCT 59.789 47.619 9.46 0.00 0.00 2.52
1800 1886 1.602377 CACCGGACCACACTTTTTCTC 59.398 52.381 9.46 0.00 0.00 2.87
1801 1887 1.489230 ACCGGACCACACTTTTTCTCT 59.511 47.619 9.46 0.00 0.00 3.10
1802 1888 2.092592 ACCGGACCACACTTTTTCTCTT 60.093 45.455 9.46 0.00 0.00 2.85
1803 1889 2.548480 CCGGACCACACTTTTTCTCTTC 59.452 50.000 0.00 0.00 0.00 2.87
1804 1890 3.202906 CGGACCACACTTTTTCTCTTCA 58.797 45.455 0.00 0.00 0.00 3.02
1805 1891 3.625764 CGGACCACACTTTTTCTCTTCAA 59.374 43.478 0.00 0.00 0.00 2.69
1806 1892 4.260784 CGGACCACACTTTTTCTCTTCAAG 60.261 45.833 0.00 0.00 0.00 3.02
1807 1893 4.498177 GGACCACACTTTTTCTCTTCAAGC 60.498 45.833 0.00 0.00 0.00 4.01
1808 1894 4.016444 ACCACACTTTTTCTCTTCAAGCA 58.984 39.130 0.00 0.00 0.00 3.91
1809 1895 4.142381 ACCACACTTTTTCTCTTCAAGCAC 60.142 41.667 0.00 0.00 0.00 4.40
1810 1896 4.354587 CACACTTTTTCTCTTCAAGCACC 58.645 43.478 0.00 0.00 0.00 5.01
1811 1897 3.381590 ACACTTTTTCTCTTCAAGCACCC 59.618 43.478 0.00 0.00 0.00 4.61
1812 1898 2.618709 ACTTTTTCTCTTCAAGCACCCG 59.381 45.455 0.00 0.00 0.00 5.28
1813 1899 0.951558 TTTTCTCTTCAAGCACCCGC 59.048 50.000 0.00 0.00 38.99 6.13
1814 1900 0.889186 TTTCTCTTCAAGCACCCGCC 60.889 55.000 0.00 0.00 39.83 6.13
1815 1901 1.768684 TTCTCTTCAAGCACCCGCCT 61.769 55.000 0.00 0.00 39.83 5.52
1816 1902 1.743252 CTCTTCAAGCACCCGCCTC 60.743 63.158 0.00 0.00 39.83 4.70
1817 1903 2.747855 CTTCAAGCACCCGCCTCC 60.748 66.667 0.00 0.00 39.83 4.30
1818 1904 3.551496 CTTCAAGCACCCGCCTCCA 62.551 63.158 0.00 0.00 39.83 3.86
1819 1905 3.126703 TTCAAGCACCCGCCTCCAA 62.127 57.895 0.00 0.00 39.83 3.53
1820 1906 3.058160 CAAGCACCCGCCTCCAAG 61.058 66.667 0.00 0.00 39.83 3.61
1821 1907 3.249189 AAGCACCCGCCTCCAAGA 61.249 61.111 0.00 0.00 39.83 3.02
1822 1908 3.259633 AAGCACCCGCCTCCAAGAG 62.260 63.158 0.00 0.00 39.83 2.85
1823 1909 3.706373 GCACCCGCCTCCAAGAGA 61.706 66.667 0.00 0.00 0.00 3.10
1824 1910 2.581354 CACCCGCCTCCAAGAGAG 59.419 66.667 0.00 0.00 42.83 3.20
1833 1919 1.792115 CTCCAAGAGAGGATCCTGCT 58.208 55.000 22.02 15.92 39.13 4.24
1834 1920 2.117865 CTCCAAGAGAGGATCCTGCTT 58.882 52.381 22.02 18.85 39.13 3.91
1835 1921 2.102925 CTCCAAGAGAGGATCCTGCTTC 59.897 54.545 22.02 13.78 39.13 3.86
1836 1922 1.140652 CCAAGAGAGGATCCTGCTTCC 59.859 57.143 22.02 3.78 33.66 3.46
1837 1923 1.140652 CAAGAGAGGATCCTGCTTCCC 59.859 57.143 22.02 2.92 33.66 3.97
1838 1924 0.641601 AGAGAGGATCCTGCTTCCCT 59.358 55.000 22.02 8.76 33.66 4.20
1839 1925 1.862911 AGAGAGGATCCTGCTTCCCTA 59.137 52.381 22.02 0.00 33.66 3.53
1840 1926 2.454381 AGAGAGGATCCTGCTTCCCTAT 59.546 50.000 22.02 2.73 33.66 2.57
1841 1927 2.831526 GAGAGGATCCTGCTTCCCTATC 59.168 54.545 22.02 0.00 33.66 2.08
1842 1928 1.905894 GAGGATCCTGCTTCCCTATCC 59.094 57.143 22.02 0.00 37.05 2.59
1843 1929 0.610687 GGATCCTGCTTCCCTATCCG 59.389 60.000 3.84 0.00 0.00 4.18
1844 1930 1.633774 GATCCTGCTTCCCTATCCGA 58.366 55.000 0.00 0.00 0.00 4.55
1845 1931 1.971357 GATCCTGCTTCCCTATCCGAA 59.029 52.381 0.00 0.00 0.00 4.30
1846 1932 1.120530 TCCTGCTTCCCTATCCGAAC 58.879 55.000 0.00 0.00 0.00 3.95
1847 1933 0.106894 CCTGCTTCCCTATCCGAACC 59.893 60.000 0.00 0.00 0.00 3.62
1848 1934 1.123928 CTGCTTCCCTATCCGAACCT 58.876 55.000 0.00 0.00 0.00 3.50
1849 1935 2.317040 CTGCTTCCCTATCCGAACCTA 58.683 52.381 0.00 0.00 0.00 3.08
1850 1936 2.036089 CTGCTTCCCTATCCGAACCTAC 59.964 54.545 0.00 0.00 0.00 3.18
1851 1937 2.317973 GCTTCCCTATCCGAACCTACT 58.682 52.381 0.00 0.00 0.00 2.57
1852 1938 2.699321 GCTTCCCTATCCGAACCTACTT 59.301 50.000 0.00 0.00 0.00 2.24
1853 1939 3.134262 GCTTCCCTATCCGAACCTACTTT 59.866 47.826 0.00 0.00 0.00 2.66
1854 1940 4.343239 GCTTCCCTATCCGAACCTACTTTA 59.657 45.833 0.00 0.00 0.00 1.85
1855 1941 5.738495 GCTTCCCTATCCGAACCTACTTTAC 60.738 48.000 0.00 0.00 0.00 2.01
1856 1942 3.885297 TCCCTATCCGAACCTACTTTACG 59.115 47.826 0.00 0.00 0.00 3.18
1857 1943 3.633986 CCCTATCCGAACCTACTTTACGT 59.366 47.826 0.00 0.00 0.00 3.57
1858 1944 4.261363 CCCTATCCGAACCTACTTTACGTC 60.261 50.000 0.00 0.00 0.00 4.34
1859 1945 4.336433 CCTATCCGAACCTACTTTACGTCA 59.664 45.833 0.00 0.00 0.00 4.35
1860 1946 4.996788 ATCCGAACCTACTTTACGTCAT 57.003 40.909 0.00 0.00 0.00 3.06
1861 1947 6.205464 CCTATCCGAACCTACTTTACGTCATA 59.795 42.308 0.00 0.00 0.00 2.15
1862 1948 6.645790 ATCCGAACCTACTTTACGTCATAT 57.354 37.500 0.00 0.00 0.00 1.78
1863 1949 6.064846 TCCGAACCTACTTTACGTCATATC 57.935 41.667 0.00 0.00 0.00 1.63
1864 1950 5.009010 TCCGAACCTACTTTACGTCATATCC 59.991 44.000 0.00 0.00 0.00 2.59
1865 1951 5.218139 CGAACCTACTTTACGTCATATCCC 58.782 45.833 0.00 0.00 0.00 3.85
1866 1952 5.221106 CGAACCTACTTTACGTCATATCCCA 60.221 44.000 0.00 0.00 0.00 4.37
1867 1953 6.516194 CGAACCTACTTTACGTCATATCCCAT 60.516 42.308 0.00 0.00 0.00 4.00
1868 1954 6.342338 ACCTACTTTACGTCATATCCCATC 57.658 41.667 0.00 0.00 0.00 3.51
1869 1955 5.245526 ACCTACTTTACGTCATATCCCATCC 59.754 44.000 0.00 0.00 0.00 3.51
1870 1956 5.480772 CCTACTTTACGTCATATCCCATCCT 59.519 44.000 0.00 0.00 0.00 3.24
1871 1957 6.662234 CCTACTTTACGTCATATCCCATCCTA 59.338 42.308 0.00 0.00 0.00 2.94
1872 1958 6.342338 ACTTTACGTCATATCCCATCCTAC 57.658 41.667 0.00 0.00 0.00 3.18
1873 1959 5.836898 ACTTTACGTCATATCCCATCCTACA 59.163 40.000 0.00 0.00 0.00 2.74
1874 1960 6.497259 ACTTTACGTCATATCCCATCCTACAT 59.503 38.462 0.00 0.00 0.00 2.29
1875 1961 4.808414 ACGTCATATCCCATCCTACATG 57.192 45.455 0.00 0.00 0.00 3.21
1876 1962 3.515502 ACGTCATATCCCATCCTACATGG 59.484 47.826 0.00 0.00 38.88 3.66
1877 1963 3.679917 CGTCATATCCCATCCTACATGGC 60.680 52.174 0.00 0.00 37.85 4.40
1878 1964 3.264193 GTCATATCCCATCCTACATGGCA 59.736 47.826 0.00 0.00 37.85 4.92
1879 1965 4.080129 GTCATATCCCATCCTACATGGCAT 60.080 45.833 0.00 0.00 37.85 4.40
1880 1966 2.893215 ATCCCATCCTACATGGCATG 57.107 50.000 25.31 25.31 37.85 4.06
1881 1967 1.521764 TCCCATCCTACATGGCATGT 58.478 50.000 33.18 33.18 46.92 3.21
1882 1968 1.143481 TCCCATCCTACATGGCATGTG 59.857 52.381 36.61 26.16 44.60 3.21
1883 1969 1.143481 CCCATCCTACATGGCATGTGA 59.857 52.381 36.61 27.62 44.60 3.58
1884 1970 2.423231 CCCATCCTACATGGCATGTGAA 60.423 50.000 36.61 23.63 44.60 3.18
1885 1971 2.882761 CCATCCTACATGGCATGTGAAG 59.117 50.000 36.61 27.48 44.60 3.02
1886 1972 2.042686 TCCTACATGGCATGTGAAGC 57.957 50.000 36.61 0.00 44.60 3.86
1887 1973 1.281577 TCCTACATGGCATGTGAAGCA 59.718 47.619 36.61 19.44 44.60 3.91
1888 1974 2.092267 TCCTACATGGCATGTGAAGCAT 60.092 45.455 36.61 15.36 44.60 3.79
1889 1975 2.292569 CCTACATGGCATGTGAAGCATC 59.707 50.000 36.61 0.00 44.60 3.91
1890 1976 1.842052 ACATGGCATGTGAAGCATCA 58.158 45.000 30.96 0.00 43.01 3.07
1905 1991 2.336945 CATCACCTTGAGGCTATGCA 57.663 50.000 0.00 0.00 39.32 3.96
1906 1992 2.860009 CATCACCTTGAGGCTATGCAT 58.140 47.619 3.79 3.79 39.32 3.96
1907 1993 3.220110 CATCACCTTGAGGCTATGCATT 58.780 45.455 3.54 0.00 39.32 3.56
1908 1994 2.646930 TCACCTTGAGGCTATGCATTG 58.353 47.619 3.54 3.55 39.32 2.82
1909 1995 2.025981 TCACCTTGAGGCTATGCATTGT 60.026 45.455 3.54 0.00 39.32 2.71
1910 1996 3.199727 TCACCTTGAGGCTATGCATTGTA 59.800 43.478 3.54 0.00 39.32 2.41
1911 1997 3.313526 CACCTTGAGGCTATGCATTGTAC 59.686 47.826 3.54 0.42 39.32 2.90
1912 1998 3.054434 ACCTTGAGGCTATGCATTGTACA 60.054 43.478 3.54 2.41 39.32 2.90
1913 1999 4.139786 CCTTGAGGCTATGCATTGTACAT 58.860 43.478 3.54 0.00 0.00 2.29
1914 2000 4.023450 CCTTGAGGCTATGCATTGTACATG 60.023 45.833 3.54 7.24 0.00 3.21
1915 2001 2.880268 TGAGGCTATGCATTGTACATGC 59.120 45.455 3.54 17.91 44.76 4.06
1916 2002 2.227388 GAGGCTATGCATTGTACATGCC 59.773 50.000 20.37 7.92 43.94 4.40
1917 2003 1.270550 GGCTATGCATTGTACATGCCC 59.729 52.381 20.37 13.59 43.94 5.36
1918 2004 2.233271 GCTATGCATTGTACATGCCCT 58.767 47.619 20.37 13.49 43.94 5.19
1919 2005 2.227388 GCTATGCATTGTACATGCCCTC 59.773 50.000 20.37 9.02 43.94 4.30
1920 2006 2.440517 ATGCATTGTACATGCCCTCA 57.559 45.000 20.37 8.34 43.94 3.86
1921 2007 1.753930 TGCATTGTACATGCCCTCAG 58.246 50.000 20.37 0.00 43.94 3.35
1922 2008 1.027357 GCATTGTACATGCCCTCAGG 58.973 55.000 15.31 0.00 39.01 3.86
1966 2052 4.427661 GAGACGTGCTGCCTCGCT 62.428 66.667 12.68 10.85 0.00 4.93
2009 2095 6.154877 TGCCAATGTGGATCAAAATCTAATGT 59.845 34.615 0.00 0.00 40.96 2.71
2138 2230 0.888736 CAGGCCATGGTCGACAACAA 60.889 55.000 18.91 0.00 0.00 2.83
2178 2270 0.254178 CCACTACATGGCCTTGAGCT 59.746 55.000 24.48 5.60 43.24 4.09
2245 2337 3.684788 CGTGACTGGATTTCGGAGAAAAT 59.315 43.478 0.00 0.00 45.90 1.82
2246 2338 4.154195 CGTGACTGGATTTCGGAGAAAATT 59.846 41.667 0.00 0.00 45.90 1.82
2255 2347 2.222886 TCGGAGAAAATTTTGTCGGCA 58.777 42.857 22.96 13.49 32.98 5.69
2266 2358 2.510238 GTCGGCAGCGCTTGATCT 60.510 61.111 7.50 0.00 0.00 2.75
2335 2427 3.305608 CCAGGGAAATGAGCAAAGTTGTC 60.306 47.826 0.00 0.00 0.00 3.18
2434 2526 0.737715 GGAGTTGTCGGCTGCACTAG 60.738 60.000 0.50 0.00 0.00 2.57
2463 2555 1.965754 GCCTTGAGCTCGTCCATCCT 61.966 60.000 9.64 0.00 38.99 3.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.550914 AGTTGCAGGTCCACCAAAGA 59.449 50.000 0.00 0.00 38.89 2.52
1 2 0.954452 GAGTTGCAGGTCCACCAAAG 59.046 55.000 0.00 0.00 38.89 2.77
2 3 0.467290 GGAGTTGCAGGTCCACCAAA 60.467 55.000 10.77 0.00 38.89 3.28
3 4 1.150536 GGAGTTGCAGGTCCACCAA 59.849 57.895 10.77 0.00 38.89 3.67
4 5 1.770110 AGGAGTTGCAGGTCCACCA 60.770 57.895 16.52 0.00 38.89 4.17
5 6 1.302832 CAGGAGTTGCAGGTCCACC 60.303 63.158 16.52 3.45 35.02 4.61
6 7 0.685097 TACAGGAGTTGCAGGTCCAC 59.315 55.000 16.52 0.00 35.02 4.02
7 8 1.278985 CATACAGGAGTTGCAGGTCCA 59.721 52.381 16.52 0.00 35.02 4.02
8 9 1.555075 TCATACAGGAGTTGCAGGTCC 59.445 52.381 8.11 8.11 0.00 4.46
9 10 3.334583 TTCATACAGGAGTTGCAGGTC 57.665 47.619 0.00 0.00 0.00 3.85
10 11 3.073062 AGTTTCATACAGGAGTTGCAGGT 59.927 43.478 0.00 0.00 0.00 4.00
11 12 3.438087 CAGTTTCATACAGGAGTTGCAGG 59.562 47.826 0.00 0.00 0.00 4.85
12 13 3.438087 CCAGTTTCATACAGGAGTTGCAG 59.562 47.826 0.00 0.00 35.50 4.41
13 14 3.181445 ACCAGTTTCATACAGGAGTTGCA 60.181 43.478 0.00 0.00 36.91 4.08
14 15 3.412386 ACCAGTTTCATACAGGAGTTGC 58.588 45.455 0.00 0.00 36.91 4.17
15 16 5.063204 TGAACCAGTTTCATACAGGAGTTG 58.937 41.667 0.00 0.00 39.45 3.16
16 17 5.304686 TGAACCAGTTTCATACAGGAGTT 57.695 39.130 0.00 0.00 39.45 3.01
17 18 4.974645 TGAACCAGTTTCATACAGGAGT 57.025 40.909 0.00 0.00 39.45 3.85
18 19 5.765182 ACTTTGAACCAGTTTCATACAGGAG 59.235 40.000 0.00 0.00 43.99 3.69
19 20 5.530915 CACTTTGAACCAGTTTCATACAGGA 59.469 40.000 0.00 0.00 43.99 3.86
20 21 5.530915 TCACTTTGAACCAGTTTCATACAGG 59.469 40.000 0.00 0.00 43.99 4.00
21 22 6.618287 TCACTTTGAACCAGTTTCATACAG 57.382 37.500 0.00 0.00 43.99 2.74
22 23 7.581213 ATTCACTTTGAACCAGTTTCATACA 57.419 32.000 0.00 0.00 43.99 2.29
23 24 8.871686 AAATTCACTTTGAACCAGTTTCATAC 57.128 30.769 0.00 0.00 43.99 2.39
24 25 7.860373 CGAAATTCACTTTGAACCAGTTTCATA 59.140 33.333 10.83 0.00 43.99 2.15
25 26 6.697019 CGAAATTCACTTTGAACCAGTTTCAT 59.303 34.615 10.83 0.00 43.99 2.57
26 27 6.033341 CGAAATTCACTTTGAACCAGTTTCA 58.967 36.000 10.83 0.00 42.83 2.69
27 28 6.020678 CACGAAATTCACTTTGAACCAGTTTC 60.021 38.462 0.00 0.00 39.45 2.78
28 29 5.804979 CACGAAATTCACTTTGAACCAGTTT 59.195 36.000 0.00 0.00 39.45 2.66
29 30 5.124776 TCACGAAATTCACTTTGAACCAGTT 59.875 36.000 0.00 0.00 39.45 3.16
30 31 4.638421 TCACGAAATTCACTTTGAACCAGT 59.362 37.500 0.00 0.00 39.45 4.00
31 32 5.168526 TCACGAAATTCACTTTGAACCAG 57.831 39.130 0.00 0.00 39.45 4.00
32 33 5.568685 TTCACGAAATTCACTTTGAACCA 57.431 34.783 0.00 0.00 39.45 3.67
33 34 6.695278 TCAATTCACGAAATTCACTTTGAACC 59.305 34.615 0.00 0.00 39.45 3.62
34 35 7.678194 TCAATTCACGAAATTCACTTTGAAC 57.322 32.000 0.00 0.00 39.45 3.18
35 36 8.591312 GTTTCAATTCACGAAATTCACTTTGAA 58.409 29.630 0.00 0.00 41.09 2.69
36 37 7.973388 AGTTTCAATTCACGAAATTCACTTTGA 59.027 29.630 0.00 0.00 35.32 2.69
37 38 8.051909 CAGTTTCAATTCACGAAATTCACTTTG 58.948 33.333 0.00 0.00 35.32 2.77
38 39 7.973388 TCAGTTTCAATTCACGAAATTCACTTT 59.027 29.630 0.00 0.00 35.32 2.66
39 40 7.479980 TCAGTTTCAATTCACGAAATTCACTT 58.520 30.769 0.00 0.00 35.32 3.16
40 41 7.026631 TCAGTTTCAATTCACGAAATTCACT 57.973 32.000 0.00 0.00 35.32 3.41
41 42 7.858052 ATCAGTTTCAATTCACGAAATTCAC 57.142 32.000 0.00 0.00 35.32 3.18
42 43 8.352201 AGAATCAGTTTCAATTCACGAAATTCA 58.648 29.630 0.00 0.00 35.32 2.57
43 44 8.633408 CAGAATCAGTTTCAATTCACGAAATTC 58.367 33.333 0.00 0.00 35.32 2.17
44 45 8.352201 TCAGAATCAGTTTCAATTCACGAAATT 58.648 29.630 0.00 0.00 38.11 1.82
45 46 7.805071 GTCAGAATCAGTTTCAATTCACGAAAT 59.195 33.333 0.00 0.00 36.75 2.17
46 47 7.132213 GTCAGAATCAGTTTCAATTCACGAAA 58.868 34.615 0.00 0.00 36.75 3.46
47 48 6.563939 CGTCAGAATCAGTTTCAATTCACGAA 60.564 38.462 0.00 0.00 35.22 3.85
48 49 5.107491 CGTCAGAATCAGTTTCAATTCACGA 60.107 40.000 0.00 0.00 35.22 4.35
49 50 5.075448 CGTCAGAATCAGTTTCAATTCACG 58.925 41.667 0.00 0.00 36.75 4.35
50 51 5.179368 TCCGTCAGAATCAGTTTCAATTCAC 59.821 40.000 0.00 0.00 36.75 3.18
51 52 5.304778 TCCGTCAGAATCAGTTTCAATTCA 58.695 37.500 0.00 0.00 36.75 2.57
52 53 5.409826 ACTCCGTCAGAATCAGTTTCAATTC 59.590 40.000 0.00 0.00 36.75 2.17
53 54 5.180117 CACTCCGTCAGAATCAGTTTCAATT 59.820 40.000 0.00 0.00 36.75 2.32
54 55 4.692625 CACTCCGTCAGAATCAGTTTCAAT 59.307 41.667 0.00 0.00 36.75 2.57
55 56 4.058124 CACTCCGTCAGAATCAGTTTCAA 58.942 43.478 0.00 0.00 36.75 2.69
56 57 3.554960 CCACTCCGTCAGAATCAGTTTCA 60.555 47.826 0.00 0.00 36.75 2.69
57 58 2.996621 CCACTCCGTCAGAATCAGTTTC 59.003 50.000 0.00 0.00 34.31 2.78
58 59 2.632996 TCCACTCCGTCAGAATCAGTTT 59.367 45.455 0.00 0.00 0.00 2.66
59 60 2.232452 CTCCACTCCGTCAGAATCAGTT 59.768 50.000 0.00 0.00 0.00 3.16
60 61 1.821753 CTCCACTCCGTCAGAATCAGT 59.178 52.381 0.00 0.00 0.00 3.41
61 62 1.470632 GCTCCACTCCGTCAGAATCAG 60.471 57.143 0.00 0.00 0.00 2.90
62 63 0.532573 GCTCCACTCCGTCAGAATCA 59.467 55.000 0.00 0.00 0.00 2.57
63 64 0.532573 TGCTCCACTCCGTCAGAATC 59.467 55.000 0.00 0.00 0.00 2.52
64 65 0.534412 CTGCTCCACTCCGTCAGAAT 59.466 55.000 0.00 0.00 0.00 2.40
65 66 0.827925 ACTGCTCCACTCCGTCAGAA 60.828 55.000 0.00 0.00 0.00 3.02
66 67 1.228583 ACTGCTCCACTCCGTCAGA 60.229 57.895 0.00 0.00 0.00 3.27
67 68 1.214062 GACTGCTCCACTCCGTCAG 59.786 63.158 0.00 0.00 0.00 3.51
68 69 2.276116 GGACTGCTCCACTCCGTCA 61.276 63.158 0.00 0.00 36.42 4.35
69 70 2.574399 GGACTGCTCCACTCCGTC 59.426 66.667 0.00 0.00 36.42 4.79
70 71 2.997897 GGGACTGCTCCACTCCGT 60.998 66.667 0.00 0.00 38.52 4.69
71 72 2.111999 TTTGGGACTGCTCCACTCCG 62.112 60.000 0.00 0.00 38.52 4.63
72 73 0.606673 GTTTGGGACTGCTCCACTCC 60.607 60.000 0.00 0.00 38.52 3.85
73 74 0.108585 TGTTTGGGACTGCTCCACTC 59.891 55.000 0.00 0.00 38.52 3.51
74 75 0.550914 TTGTTTGGGACTGCTCCACT 59.449 50.000 0.00 0.00 38.52 4.00
75 76 1.067060 GTTTGTTTGGGACTGCTCCAC 59.933 52.381 0.00 0.00 38.52 4.02
76 77 1.398692 GTTTGTTTGGGACTGCTCCA 58.601 50.000 0.00 0.00 38.52 3.86
77 78 0.673985 GGTTTGTTTGGGACTGCTCC 59.326 55.000 0.00 0.00 35.50 4.70
78 79 0.673985 GGGTTTGTTTGGGACTGCTC 59.326 55.000 0.00 0.00 0.00 4.26
79 80 0.261696 AGGGTTTGTTTGGGACTGCT 59.738 50.000 0.00 0.00 0.00 4.24
80 81 1.119684 AAGGGTTTGTTTGGGACTGC 58.880 50.000 0.00 0.00 0.00 4.40
81 82 9.063615 GTATATATAAGGGTTTGTTTGGGACTG 57.936 37.037 0.00 0.00 0.00 3.51
82 83 8.783903 TGTATATATAAGGGTTTGTTTGGGACT 58.216 33.333 0.00 0.00 0.00 3.85
83 84 8.983702 TGTATATATAAGGGTTTGTTTGGGAC 57.016 34.615 0.00 0.00 0.00 4.46
203 204 9.067986 AGTTAACCCTCTTAAACTTTGATCAAG 57.932 33.333 8.41 5.87 38.64 3.02
204 205 8.990163 AGTTAACCCTCTTAAACTTTGATCAA 57.010 30.769 3.38 3.38 0.00 2.57
205 206 8.437575 AGAGTTAACCCTCTTAAACTTTGATCA 58.562 33.333 0.88 0.00 38.69 2.92
206 207 8.850007 AGAGTTAACCCTCTTAAACTTTGATC 57.150 34.615 0.88 0.00 38.69 2.92
218 219 9.775854 GTAAGTTTTCTAAAGAGTTAACCCTCT 57.224 33.333 0.88 0.00 43.65 3.69
219 220 9.551734 TGTAAGTTTTCTAAAGAGTTAACCCTC 57.448 33.333 0.88 0.00 0.00 4.30
220 221 9.334947 GTGTAAGTTTTCTAAAGAGTTAACCCT 57.665 33.333 0.88 0.00 0.00 4.34
221 222 8.278408 CGTGTAAGTTTTCTAAAGAGTTAACCC 58.722 37.037 0.88 0.00 0.00 4.11
222 223 7.795734 GCGTGTAAGTTTTCTAAAGAGTTAACC 59.204 37.037 0.88 0.00 0.00 2.85
223 224 8.330302 TGCGTGTAAGTTTTCTAAAGAGTTAAC 58.670 33.333 0.00 0.00 0.00 2.01
224 225 8.330302 GTGCGTGTAAGTTTTCTAAAGAGTTAA 58.670 33.333 0.00 0.00 0.00 2.01
225 226 7.707893 AGTGCGTGTAAGTTTTCTAAAGAGTTA 59.292 33.333 0.00 0.00 0.00 2.24
226 227 6.537660 AGTGCGTGTAAGTTTTCTAAAGAGTT 59.462 34.615 0.00 0.00 0.00 3.01
227 228 6.047231 AGTGCGTGTAAGTTTTCTAAAGAGT 58.953 36.000 0.00 0.00 0.00 3.24
228 229 6.526566 AGTGCGTGTAAGTTTTCTAAAGAG 57.473 37.500 0.00 0.00 0.00 2.85
229 230 7.654520 ACATAGTGCGTGTAAGTTTTCTAAAGA 59.345 33.333 0.00 0.00 0.00 2.52
230 231 7.793902 ACATAGTGCGTGTAAGTTTTCTAAAG 58.206 34.615 0.00 0.00 0.00 1.85
231 232 7.438757 TGACATAGTGCGTGTAAGTTTTCTAAA 59.561 33.333 0.00 0.00 0.00 1.85
232 233 6.924612 TGACATAGTGCGTGTAAGTTTTCTAA 59.075 34.615 0.00 0.00 0.00 2.10
233 234 6.364165 GTGACATAGTGCGTGTAAGTTTTCTA 59.636 38.462 0.00 0.00 0.00 2.10
234 235 5.176958 GTGACATAGTGCGTGTAAGTTTTCT 59.823 40.000 0.00 0.00 0.00 2.52
235 236 5.371629 GTGACATAGTGCGTGTAAGTTTTC 58.628 41.667 0.00 0.00 0.00 2.29
236 237 4.084745 CGTGACATAGTGCGTGTAAGTTTT 60.085 41.667 0.00 0.00 0.00 2.43
237 238 3.427528 CGTGACATAGTGCGTGTAAGTTT 59.572 43.478 0.00 0.00 0.00 2.66
238 239 2.984471 CGTGACATAGTGCGTGTAAGTT 59.016 45.455 0.00 0.00 0.00 2.66
239 240 2.227149 TCGTGACATAGTGCGTGTAAGT 59.773 45.455 0.00 0.00 0.00 2.24
240 241 2.846550 CTCGTGACATAGTGCGTGTAAG 59.153 50.000 0.00 0.00 0.00 2.34
241 242 2.485038 TCTCGTGACATAGTGCGTGTAA 59.515 45.455 0.00 0.00 0.00 2.41
242 243 2.078392 TCTCGTGACATAGTGCGTGTA 58.922 47.619 0.00 0.00 0.00 2.90
243 244 0.879090 TCTCGTGACATAGTGCGTGT 59.121 50.000 0.00 0.00 0.00 4.49
244 245 1.539341 CTCTCGTGACATAGTGCGTG 58.461 55.000 0.00 0.00 0.00 5.34
245 246 0.179161 GCTCTCGTGACATAGTGCGT 60.179 55.000 0.00 0.00 0.00 5.24
246 247 1.196749 CGCTCTCGTGACATAGTGCG 61.197 60.000 17.15 17.15 45.45 5.34
247 248 0.098905 TCGCTCTCGTGACATAGTGC 59.901 55.000 5.28 5.28 36.96 4.40
255 256 1.574925 GTGTGAGTCGCTCTCGTGA 59.425 57.895 5.11 0.00 45.46 4.35
256 257 1.794003 CGTGTGAGTCGCTCTCGTG 60.794 63.158 5.11 0.00 45.46 4.35
257 258 1.783031 AACGTGTGAGTCGCTCTCGT 61.783 55.000 5.11 10.11 45.46 4.18
258 259 1.082038 AACGTGTGAGTCGCTCTCG 60.082 57.895 5.11 9.53 45.46 4.04
259 260 1.609840 GCAACGTGTGAGTCGCTCTC 61.610 60.000 5.11 4.83 43.03 3.20
260 261 1.661821 GCAACGTGTGAGTCGCTCT 60.662 57.895 5.11 0.00 0.00 4.09
261 262 1.949133 TGCAACGTGTGAGTCGCTC 60.949 57.895 5.11 0.08 0.00 5.03
262 263 2.106131 TGCAACGTGTGAGTCGCT 59.894 55.556 5.11 0.00 0.00 4.93
263 264 2.245532 GTGCAACGTGTGAGTCGC 59.754 61.111 0.00 0.00 0.00 5.19
286 287 3.506312 GAGAGAGAGAGAGCGCGCG 62.506 68.421 28.44 28.44 0.00 6.86
287 288 2.105960 GAGAGAGAGAGAGAGCGCGC 62.106 65.000 26.66 26.66 0.00 6.86
288 289 1.498865 GGAGAGAGAGAGAGAGCGCG 61.499 65.000 0.00 0.00 0.00 6.86
289 290 1.166531 GGGAGAGAGAGAGAGAGCGC 61.167 65.000 0.00 0.00 0.00 5.92
290 291 0.469917 AGGGAGAGAGAGAGAGAGCG 59.530 60.000 0.00 0.00 0.00 5.03
291 292 1.771255 AGAGGGAGAGAGAGAGAGAGC 59.229 57.143 0.00 0.00 0.00 4.09
292 293 3.041211 TGAGAGGGAGAGAGAGAGAGAG 58.959 54.545 0.00 0.00 0.00 3.20
293 294 3.129262 TGAGAGGGAGAGAGAGAGAGA 57.871 52.381 0.00 0.00 0.00 3.10
294 295 3.931907 TTGAGAGGGAGAGAGAGAGAG 57.068 52.381 0.00 0.00 0.00 3.20
295 296 4.879295 AATTGAGAGGGAGAGAGAGAGA 57.121 45.455 0.00 0.00 0.00 3.10
296 297 5.937975 AAAATTGAGAGGGAGAGAGAGAG 57.062 43.478 0.00 0.00 0.00 3.20
328 329 6.069731 AGCATTACTTGAGGGAGAGATTTTCT 60.070 38.462 0.00 0.00 39.43 2.52
329 330 6.118852 AGCATTACTTGAGGGAGAGATTTTC 58.881 40.000 0.00 0.00 0.00 2.29
330 331 6.072199 AGCATTACTTGAGGGAGAGATTTT 57.928 37.500 0.00 0.00 0.00 1.82
331 332 5.707066 AGCATTACTTGAGGGAGAGATTT 57.293 39.130 0.00 0.00 0.00 2.17
332 333 5.663106 TGTAGCATTACTTGAGGGAGAGATT 59.337 40.000 0.00 0.00 0.00 2.40
333 334 5.211973 TGTAGCATTACTTGAGGGAGAGAT 58.788 41.667 0.00 0.00 0.00 2.75
340 341 4.804139 CCGTAGTTGTAGCATTACTTGAGG 59.196 45.833 0.00 0.00 0.00 3.86
344 345 3.770933 TCCCCGTAGTTGTAGCATTACTT 59.229 43.478 0.00 0.00 0.00 2.24
345 346 3.368248 TCCCCGTAGTTGTAGCATTACT 58.632 45.455 0.00 0.00 0.00 2.24
346 347 3.131755 ACTCCCCGTAGTTGTAGCATTAC 59.868 47.826 0.00 0.00 0.00 1.89
355 356 3.007182 TCCTGTAAAACTCCCCGTAGTTG 59.993 47.826 0.00 0.00 39.62 3.16
387 388 5.859495 ACTAATAGCCCATCTCAACTTAGC 58.141 41.667 0.00 0.00 0.00 3.09
393 394 7.292356 TCATCCTTAACTAATAGCCCATCTCAA 59.708 37.037 0.00 0.00 0.00 3.02
405 406 3.747708 GCCCCGCTTCATCCTTAACTAAT 60.748 47.826 0.00 0.00 0.00 1.73
424 431 1.001393 TGATTTTCAGGACGGGCCC 60.001 57.895 13.57 13.57 37.37 5.80
435 442 0.553333 CCCCTCTCCCCCTGATTTTC 59.447 60.000 0.00 0.00 0.00 2.29
445 452 0.616964 AACGGACTAACCCCTCTCCC 60.617 60.000 0.00 0.00 34.64 4.30
452 459 4.263018 ACAGAGTTTAACGGACTAACCC 57.737 45.455 0.00 0.00 34.64 4.11
453 460 7.713764 TTTTACAGAGTTTAACGGACTAACC 57.286 36.000 0.00 0.00 0.00 2.85
511 573 1.479709 AGATGGGTTCCTCGTCAGAG 58.520 55.000 0.00 0.00 43.98 3.35
517 579 4.003648 GGCAATAATAGATGGGTTCCTCG 58.996 47.826 0.00 0.00 0.00 4.63
537 599 2.968574 TCTCAACATAGAGATGAGGGGC 59.031 50.000 2.53 0.00 44.67 5.80
538 600 3.006752 GCTCTCAACATAGAGATGAGGGG 59.993 52.174 5.09 0.00 45.16 4.79
544 606 6.593382 GTCACTTTTGCTCTCAACATAGAGAT 59.407 38.462 5.09 0.00 44.93 2.75
550 612 4.202441 AGTGTCACTTTTGCTCTCAACAT 58.798 39.130 0.00 0.00 30.75 2.71
564 626 3.742640 GCTTCTGACCTTCAAGTGTCACT 60.743 47.826 0.00 0.00 36.62 3.41
574 636 0.603975 AAGCCACGCTTCTGACCTTC 60.604 55.000 0.00 0.00 46.77 3.46
644 706 0.034896 TTCCGGGAGTTGTCAAGCTC 59.965 55.000 0.00 6.62 0.00 4.09
720 782 3.701530 TGCGCGCGTTCAACTCTG 61.702 61.111 32.35 0.00 0.00 3.35
721 783 3.702555 GTGCGCGCGTTCAACTCT 61.703 61.111 32.35 0.00 0.00 3.24
803 865 2.299521 CTAGCTGGAGGTAGTTAGCGT 58.700 52.381 0.00 0.00 40.27 5.07
806 868 2.291190 GTCGCTAGCTGGAGGTAGTTAG 59.709 54.545 13.93 6.73 45.22 2.34
807 869 2.295885 GTCGCTAGCTGGAGGTAGTTA 58.704 52.381 13.93 1.34 45.22 2.24
808 870 1.104630 GTCGCTAGCTGGAGGTAGTT 58.895 55.000 13.93 0.00 45.22 2.24
809 871 0.034380 TGTCGCTAGCTGGAGGTAGT 60.034 55.000 13.93 0.00 45.22 2.73
811 873 1.035932 GGTGTCGCTAGCTGGAGGTA 61.036 60.000 13.93 0.00 0.00 3.08
812 874 2.352032 GGTGTCGCTAGCTGGAGGT 61.352 63.158 13.93 0.00 0.00 3.85
814 876 0.459237 CTTGGTGTCGCTAGCTGGAG 60.459 60.000 13.93 0.00 0.00 3.86
815 877 1.591703 CTTGGTGTCGCTAGCTGGA 59.408 57.895 13.93 0.00 0.00 3.86
817 879 2.103042 GGCTTGGTGTCGCTAGCTG 61.103 63.158 13.93 6.69 34.16 4.24
818 880 2.266055 GGCTTGGTGTCGCTAGCT 59.734 61.111 13.93 0.00 34.16 3.32
819 881 3.188786 CGGCTTGGTGTCGCTAGC 61.189 66.667 4.06 4.06 36.81 3.42
874 941 2.367567 TGGTTCTATGGGCTTCGGTATC 59.632 50.000 0.00 0.00 0.00 2.24
877 944 0.988832 TTGGTTCTATGGGCTTCGGT 59.011 50.000 0.00 0.00 0.00 4.69
889 956 6.578944 TGTGATTATATAGCACGTTGGTTCT 58.421 36.000 11.08 0.00 35.37 3.01
954 1021 2.262915 CGCTGAAGGAAGGACGCT 59.737 61.111 0.00 0.00 0.00 5.07
1083 1154 4.374702 GCGGACACAACAGCTGCG 62.375 66.667 15.27 8.03 0.00 5.18
1256 1336 2.167281 CTCATCACCTTGGTGACGATCT 59.833 50.000 22.89 5.89 31.53 2.75
1445 1525 1.068402 CACAATCAGGATGCAAACGCA 60.068 47.619 0.00 0.00 45.23 5.24
1448 1528 1.895131 ACCCACAATCAGGATGCAAAC 59.105 47.619 0.00 0.00 34.76 2.93
1546 1626 6.319152 TGGTCGTATTTTCTTTTCCAAAGACA 59.681 34.615 0.00 0.00 0.00 3.41
1547 1627 6.731164 TGGTCGTATTTTCTTTTCCAAAGAC 58.269 36.000 0.00 0.00 0.00 3.01
1548 1628 6.945938 TGGTCGTATTTTCTTTTCCAAAGA 57.054 33.333 0.00 0.00 0.00 2.52
1549 1629 7.480542 CGTATGGTCGTATTTTCTTTTCCAAAG 59.519 37.037 0.00 0.00 0.00 2.77
1550 1630 7.041235 ACGTATGGTCGTATTTTCTTTTCCAAA 60.041 33.333 0.00 0.00 42.35 3.28
1553 1633 6.413018 ACGTATGGTCGTATTTTCTTTTCC 57.587 37.500 0.00 0.00 42.35 3.13
1559 1645 6.473131 TCATGTGTACGTATGGTCGTATTTTC 59.527 38.462 0.00 0.00 45.61 2.29
1561 1647 5.893687 TCATGTGTACGTATGGTCGTATTT 58.106 37.500 0.00 0.00 45.61 1.40
1567 1653 2.470821 GCCTCATGTGTACGTATGGTC 58.529 52.381 0.00 0.00 0.00 4.02
1581 1667 0.540923 GTCTGAGCTGAAGGCCTCAT 59.459 55.000 5.23 0.00 43.05 2.90
1583 1669 0.612744 AAGTCTGAGCTGAAGGCCTC 59.387 55.000 5.23 0.00 43.05 4.70
1584 1670 0.612744 GAAGTCTGAGCTGAAGGCCT 59.387 55.000 0.00 0.00 43.05 5.19
1585 1671 0.612744 AGAAGTCTGAGCTGAAGGCC 59.387 55.000 0.00 0.00 43.05 5.19
1586 1672 1.274728 TGAGAAGTCTGAGCTGAAGGC 59.725 52.381 0.00 0.00 42.19 4.35
1587 1673 2.094078 CCTGAGAAGTCTGAGCTGAAGG 60.094 54.545 0.00 0.00 0.00 3.46
1588 1674 2.094078 CCCTGAGAAGTCTGAGCTGAAG 60.094 54.545 0.00 0.00 0.00 3.02
1589 1675 1.898472 CCCTGAGAAGTCTGAGCTGAA 59.102 52.381 0.00 0.00 0.00 3.02
1591 1677 0.108233 GCCCTGAGAAGTCTGAGCTG 60.108 60.000 0.00 0.00 0.00 4.24
1593 1679 0.540923 ATGCCCTGAGAAGTCTGAGC 59.459 55.000 0.00 0.00 0.00 4.26
1596 1682 2.234661 TGTACATGCCCTGAGAAGTCTG 59.765 50.000 0.00 0.00 0.00 3.51
1597 1683 2.540383 TGTACATGCCCTGAGAAGTCT 58.460 47.619 0.00 0.00 0.00 3.24
1598 1684 3.334583 TTGTACATGCCCTGAGAAGTC 57.665 47.619 0.00 0.00 0.00 3.01
1600 1686 2.947652 CCATTGTACATGCCCTGAGAAG 59.052 50.000 0.00 0.00 0.00 2.85
1601 1687 2.308570 ACCATTGTACATGCCCTGAGAA 59.691 45.455 0.00 0.00 0.00 2.87
1603 1689 2.019249 CACCATTGTACATGCCCTGAG 58.981 52.381 0.00 0.00 0.00 3.35
1604 1690 1.340893 CCACCATTGTACATGCCCTGA 60.341 52.381 0.00 0.00 0.00 3.86
1605 1691 1.105457 CCACCATTGTACATGCCCTG 58.895 55.000 0.00 0.00 0.00 4.45
1606 1692 0.684153 GCCACCATTGTACATGCCCT 60.684 55.000 0.00 0.00 0.00 5.19
1607 1693 0.969917 TGCCACCATTGTACATGCCC 60.970 55.000 0.00 0.00 0.00 5.36
1608 1694 1.113788 ATGCCACCATTGTACATGCC 58.886 50.000 0.00 0.00 0.00 4.40
1609 1695 4.589216 AATATGCCACCATTGTACATGC 57.411 40.909 0.00 0.00 32.85 4.06
1610 1696 8.791675 TGTATTAATATGCCACCATTGTACATG 58.208 33.333 0.00 0.00 32.85 3.21
1611 1697 8.932434 TGTATTAATATGCCACCATTGTACAT 57.068 30.769 0.00 0.00 32.85 2.29
1612 1698 8.932434 ATGTATTAATATGCCACCATTGTACA 57.068 30.769 0.00 0.00 32.85 2.90
1629 1715 8.849168 CCTTTTGTCATGAGGCATATGTATTAA 58.151 33.333 4.29 0.00 0.00 1.40
1630 1716 7.998383 ACCTTTTGTCATGAGGCATATGTATTA 59.002 33.333 4.29 0.00 33.78 0.98
1631 1717 6.835488 ACCTTTTGTCATGAGGCATATGTATT 59.165 34.615 4.29 0.00 33.78 1.89
1632 1718 6.367983 ACCTTTTGTCATGAGGCATATGTAT 58.632 36.000 4.29 0.00 33.78 2.29
1633 1719 5.754782 ACCTTTTGTCATGAGGCATATGTA 58.245 37.500 4.29 0.00 33.78 2.29
1634 1720 4.603131 ACCTTTTGTCATGAGGCATATGT 58.397 39.130 4.29 0.00 33.78 2.29
1635 1721 6.698008 TTACCTTTTGTCATGAGGCATATG 57.302 37.500 0.00 0.00 33.78 1.78
1636 1722 7.902920 AATTACCTTTTGTCATGAGGCATAT 57.097 32.000 0.00 0.00 33.78 1.78
1637 1723 7.395772 TCAAATTACCTTTTGTCATGAGGCATA 59.604 33.333 0.00 0.00 37.73 3.14
1638 1724 6.211184 TCAAATTACCTTTTGTCATGAGGCAT 59.789 34.615 0.00 0.00 37.73 4.40
1639 1725 5.538053 TCAAATTACCTTTTGTCATGAGGCA 59.462 36.000 0.00 0.00 37.73 4.75
1640 1726 6.024552 TCAAATTACCTTTTGTCATGAGGC 57.975 37.500 0.00 0.00 37.73 4.70
1641 1727 7.661040 ACTTCAAATTACCTTTTGTCATGAGG 58.339 34.615 0.00 0.00 37.73 3.86
1668 1754 9.320295 ACATTGGGGAGAAAAATAAAATGTAGA 57.680 29.630 0.00 0.00 35.76 2.59
1671 1757 9.942850 CTTACATTGGGGAGAAAAATAAAATGT 57.057 29.630 0.00 0.00 39.56 2.71
1672 1758 8.882736 GCTTACATTGGGGAGAAAAATAAAATG 58.117 33.333 0.00 0.00 0.00 2.32
1673 1759 8.825774 AGCTTACATTGGGGAGAAAAATAAAAT 58.174 29.630 0.00 0.00 0.00 1.82
1674 1760 8.201242 AGCTTACATTGGGGAGAAAAATAAAA 57.799 30.769 0.00 0.00 0.00 1.52
1675 1761 7.790782 AGCTTACATTGGGGAGAAAAATAAA 57.209 32.000 0.00 0.00 0.00 1.40
1676 1762 9.131791 GATAGCTTACATTGGGGAGAAAAATAA 57.868 33.333 0.00 0.00 0.00 1.40
1677 1763 8.278639 TGATAGCTTACATTGGGGAGAAAAATA 58.721 33.333 0.00 0.00 0.00 1.40
1678 1764 7.068716 GTGATAGCTTACATTGGGGAGAAAAAT 59.931 37.037 0.00 0.00 0.00 1.82
1679 1765 6.377146 GTGATAGCTTACATTGGGGAGAAAAA 59.623 38.462 0.00 0.00 0.00 1.94
1680 1766 5.885912 GTGATAGCTTACATTGGGGAGAAAA 59.114 40.000 0.00 0.00 0.00 2.29
1681 1767 5.191722 AGTGATAGCTTACATTGGGGAGAAA 59.808 40.000 0.00 0.00 0.00 2.52
1682 1768 4.721776 AGTGATAGCTTACATTGGGGAGAA 59.278 41.667 0.00 0.00 0.00 2.87
1683 1769 4.298626 AGTGATAGCTTACATTGGGGAGA 58.701 43.478 0.00 0.00 0.00 3.71
1684 1770 4.696479 AGTGATAGCTTACATTGGGGAG 57.304 45.455 0.00 0.00 0.00 4.30
1685 1771 6.101150 ACATTAGTGATAGCTTACATTGGGGA 59.899 38.462 0.00 0.00 0.00 4.81
1686 1772 6.299141 ACATTAGTGATAGCTTACATTGGGG 58.701 40.000 0.00 0.00 0.00 4.96
1730 1816 9.672673 AGATGCATGTGTACTAAAGTCTTTATT 57.327 29.630 2.46 3.27 0.00 1.40
1731 1817 9.319143 GAGATGCATGTGTACTAAAGTCTTTAT 57.681 33.333 2.46 0.30 0.00 1.40
1732 1818 8.531982 AGAGATGCATGTGTACTAAAGTCTTTA 58.468 33.333 2.46 4.97 0.00 1.85
1733 1819 7.390027 AGAGATGCATGTGTACTAAAGTCTTT 58.610 34.615 2.46 2.81 0.00 2.52
1734 1820 6.940739 AGAGATGCATGTGTACTAAAGTCTT 58.059 36.000 2.46 0.00 0.00 3.01
1735 1821 6.537453 AGAGATGCATGTGTACTAAAGTCT 57.463 37.500 2.46 0.00 0.00 3.24
1736 1822 7.484975 AGTAGAGATGCATGTGTACTAAAGTC 58.515 38.462 26.28 3.69 30.07 3.01
1737 1823 7.411486 AGTAGAGATGCATGTGTACTAAAGT 57.589 36.000 26.28 7.72 30.07 2.66
1738 1824 8.709386 AAAGTAGAGATGCATGTGTACTAAAG 57.291 34.615 27.25 0.00 30.49 1.85
1739 1825 9.151471 GAAAAGTAGAGATGCATGTGTACTAAA 57.849 33.333 27.25 0.00 30.49 1.85
1740 1826 8.311109 TGAAAAGTAGAGATGCATGTGTACTAA 58.689 33.333 27.25 14.51 30.49 2.24
1741 1827 7.759886 GTGAAAAGTAGAGATGCATGTGTACTA 59.240 37.037 27.25 13.62 30.49 1.82
1742 1828 6.591834 GTGAAAAGTAGAGATGCATGTGTACT 59.408 38.462 23.22 23.22 32.62 2.73
1743 1829 6.591834 AGTGAAAAGTAGAGATGCATGTGTAC 59.408 38.462 19.88 19.88 0.00 2.90
1744 1830 6.701340 AGTGAAAAGTAGAGATGCATGTGTA 58.299 36.000 2.46 0.00 0.00 2.90
1745 1831 5.555017 AGTGAAAAGTAGAGATGCATGTGT 58.445 37.500 2.46 0.00 0.00 3.72
1746 1832 6.148315 TGAAGTGAAAAGTAGAGATGCATGTG 59.852 38.462 2.46 0.00 0.00 3.21
1747 1833 6.233434 TGAAGTGAAAAGTAGAGATGCATGT 58.767 36.000 2.46 0.00 0.00 3.21
1748 1834 6.732531 TGAAGTGAAAAGTAGAGATGCATG 57.267 37.500 2.46 0.00 0.00 4.06
1749 1835 6.150140 GGTTGAAGTGAAAAGTAGAGATGCAT 59.850 38.462 0.00 0.00 0.00 3.96
1750 1836 5.470098 GGTTGAAGTGAAAAGTAGAGATGCA 59.530 40.000 0.00 0.00 0.00 3.96
1751 1837 5.703130 AGGTTGAAGTGAAAAGTAGAGATGC 59.297 40.000 0.00 0.00 0.00 3.91
1752 1838 7.736447 AAGGTTGAAGTGAAAAGTAGAGATG 57.264 36.000 0.00 0.00 0.00 2.90
1753 1839 7.775561 ACAAAGGTTGAAGTGAAAAGTAGAGAT 59.224 33.333 0.00 0.00 0.00 2.75
1754 1840 7.110155 ACAAAGGTTGAAGTGAAAAGTAGAGA 58.890 34.615 0.00 0.00 0.00 3.10
1755 1841 7.065803 TGACAAAGGTTGAAGTGAAAAGTAGAG 59.934 37.037 0.00 0.00 0.00 2.43
1756 1842 6.882140 TGACAAAGGTTGAAGTGAAAAGTAGA 59.118 34.615 0.00 0.00 0.00 2.59
1757 1843 6.967199 GTGACAAAGGTTGAAGTGAAAAGTAG 59.033 38.462 0.00 0.00 0.00 2.57
1758 1844 6.127842 GGTGACAAAGGTTGAAGTGAAAAGTA 60.128 38.462 0.00 0.00 0.00 2.24
1759 1845 5.336451 GGTGACAAAGGTTGAAGTGAAAAGT 60.336 40.000 0.00 0.00 0.00 2.66
1760 1846 5.102313 GGTGACAAAGGTTGAAGTGAAAAG 58.898 41.667 0.00 0.00 0.00 2.27
1761 1847 4.380023 CGGTGACAAAGGTTGAAGTGAAAA 60.380 41.667 0.00 0.00 0.00 2.29
1762 1848 3.127895 CGGTGACAAAGGTTGAAGTGAAA 59.872 43.478 0.00 0.00 0.00 2.69
1763 1849 2.680841 CGGTGACAAAGGTTGAAGTGAA 59.319 45.455 0.00 0.00 0.00 3.18
1764 1850 2.285083 CGGTGACAAAGGTTGAAGTGA 58.715 47.619 0.00 0.00 0.00 3.41
1765 1851 1.333619 CCGGTGACAAAGGTTGAAGTG 59.666 52.381 0.00 0.00 0.00 3.16
1766 1852 1.210967 TCCGGTGACAAAGGTTGAAGT 59.789 47.619 0.00 0.00 0.00 3.01
1767 1853 1.602377 GTCCGGTGACAAAGGTTGAAG 59.398 52.381 0.00 0.00 41.37 3.02
1768 1854 1.670791 GTCCGGTGACAAAGGTTGAA 58.329 50.000 0.00 0.00 41.37 2.69
1769 1855 0.179040 GGTCCGGTGACAAAGGTTGA 60.179 55.000 0.00 0.00 43.65 3.18
1770 1856 0.464735 TGGTCCGGTGACAAAGGTTG 60.465 55.000 0.00 0.00 43.65 3.77
1771 1857 0.464916 GTGGTCCGGTGACAAAGGTT 60.465 55.000 0.00 0.00 43.65 3.50
1772 1858 1.147600 GTGGTCCGGTGACAAAGGT 59.852 57.895 0.00 0.00 43.65 3.50
1773 1859 1.147376 TGTGGTCCGGTGACAAAGG 59.853 57.895 0.00 0.00 43.65 3.11
1774 1860 0.179056 AGTGTGGTCCGGTGACAAAG 60.179 55.000 0.00 0.00 43.65 2.77
1775 1861 0.253610 AAGTGTGGTCCGGTGACAAA 59.746 50.000 0.00 0.00 43.65 2.83
1776 1862 0.253610 AAAGTGTGGTCCGGTGACAA 59.746 50.000 0.00 0.00 43.65 3.18
1777 1863 0.253610 AAAAGTGTGGTCCGGTGACA 59.746 50.000 0.00 0.00 43.65 3.58
1778 1864 1.332686 GAAAAAGTGTGGTCCGGTGAC 59.667 52.381 0.00 0.00 40.98 3.67
1779 1865 1.210967 AGAAAAAGTGTGGTCCGGTGA 59.789 47.619 0.00 0.00 0.00 4.02
1780 1866 1.602377 GAGAAAAAGTGTGGTCCGGTG 59.398 52.381 0.00 0.00 0.00 4.94
1781 1867 1.489230 AGAGAAAAAGTGTGGTCCGGT 59.511 47.619 0.00 0.00 0.00 5.28
1782 1868 2.256117 AGAGAAAAAGTGTGGTCCGG 57.744 50.000 0.00 0.00 0.00 5.14
1783 1869 3.202906 TGAAGAGAAAAAGTGTGGTCCG 58.797 45.455 0.00 0.00 0.00 4.79
1784 1870 4.498177 GCTTGAAGAGAAAAAGTGTGGTCC 60.498 45.833 0.00 0.00 0.00 4.46
1785 1871 4.096382 TGCTTGAAGAGAAAAAGTGTGGTC 59.904 41.667 0.00 0.00 0.00 4.02
1786 1872 4.016444 TGCTTGAAGAGAAAAAGTGTGGT 58.984 39.130 0.00 0.00 0.00 4.16
1787 1873 4.354587 GTGCTTGAAGAGAAAAAGTGTGG 58.645 43.478 0.00 0.00 0.00 4.17
1788 1874 4.354587 GGTGCTTGAAGAGAAAAAGTGTG 58.645 43.478 0.00 0.00 0.00 3.82
1789 1875 3.381590 GGGTGCTTGAAGAGAAAAAGTGT 59.618 43.478 0.00 0.00 0.00 3.55
1790 1876 3.548818 CGGGTGCTTGAAGAGAAAAAGTG 60.549 47.826 0.00 0.00 0.00 3.16
1791 1877 2.618709 CGGGTGCTTGAAGAGAAAAAGT 59.381 45.455 0.00 0.00 0.00 2.66
1792 1878 2.605580 GCGGGTGCTTGAAGAGAAAAAG 60.606 50.000 0.00 0.00 38.39 2.27
1793 1879 1.336755 GCGGGTGCTTGAAGAGAAAAA 59.663 47.619 0.00 0.00 38.39 1.94
1794 1880 0.951558 GCGGGTGCTTGAAGAGAAAA 59.048 50.000 0.00 0.00 38.39 2.29
1795 1881 0.889186 GGCGGGTGCTTGAAGAGAAA 60.889 55.000 0.00 0.00 42.25 2.52
1796 1882 1.302511 GGCGGGTGCTTGAAGAGAA 60.303 57.895 0.00 0.00 42.25 2.87
1797 1883 2.172483 GAGGCGGGTGCTTGAAGAGA 62.172 60.000 0.00 0.00 42.25 3.10
1798 1884 1.743252 GAGGCGGGTGCTTGAAGAG 60.743 63.158 0.00 0.00 42.25 2.85
1799 1885 2.347490 GAGGCGGGTGCTTGAAGA 59.653 61.111 0.00 0.00 42.25 2.87
1800 1886 2.747855 GGAGGCGGGTGCTTGAAG 60.748 66.667 0.00 0.00 42.25 3.02
1801 1887 3.126703 TTGGAGGCGGGTGCTTGAA 62.127 57.895 0.00 0.00 42.25 2.69
1802 1888 3.551496 CTTGGAGGCGGGTGCTTGA 62.551 63.158 0.00 0.00 42.25 3.02
1803 1889 3.058160 CTTGGAGGCGGGTGCTTG 61.058 66.667 0.00 0.00 42.25 4.01
1804 1890 3.249189 TCTTGGAGGCGGGTGCTT 61.249 61.111 0.00 0.00 42.25 3.91
1805 1891 3.710722 CTCTTGGAGGCGGGTGCT 61.711 66.667 0.00 0.00 42.25 4.40
1806 1892 3.672295 CTCTCTTGGAGGCGGGTGC 62.672 68.421 0.00 0.00 38.35 5.01
1807 1893 2.581354 CTCTCTTGGAGGCGGGTG 59.419 66.667 0.00 0.00 38.35 4.61
1814 1900 1.792115 AGCAGGATCCTCTCTTGGAG 58.208 55.000 12.69 0.00 39.78 3.86
1815 1901 2.114616 GAAGCAGGATCCTCTCTTGGA 58.885 52.381 23.60 0.00 40.82 3.53
1816 1902 1.140652 GGAAGCAGGATCCTCTCTTGG 59.859 57.143 23.60 9.73 33.98 3.61
1817 1903 1.140652 GGGAAGCAGGATCCTCTCTTG 59.859 57.143 23.60 11.15 37.14 3.02
1818 1904 1.009429 AGGGAAGCAGGATCCTCTCTT 59.991 52.381 20.33 20.33 37.14 2.85
1819 1905 0.641601 AGGGAAGCAGGATCCTCTCT 59.358 55.000 12.69 9.35 37.14 3.10
1820 1906 2.390225 TAGGGAAGCAGGATCCTCTC 57.610 55.000 12.69 8.84 37.14 3.20
1821 1907 2.494439 GGATAGGGAAGCAGGATCCTCT 60.494 54.545 12.69 9.57 37.14 3.69
1822 1908 1.905894 GGATAGGGAAGCAGGATCCTC 59.094 57.143 12.69 7.20 37.14 3.71
1823 1909 1.829261 CGGATAGGGAAGCAGGATCCT 60.829 57.143 9.02 9.02 37.14 3.24
1824 1910 0.610687 CGGATAGGGAAGCAGGATCC 59.389 60.000 2.48 2.48 36.16 3.36
1825 1911 1.633774 TCGGATAGGGAAGCAGGATC 58.366 55.000 0.00 0.00 0.00 3.36
1826 1912 1.694696 GTTCGGATAGGGAAGCAGGAT 59.305 52.381 0.00 0.00 0.00 3.24
1827 1913 1.120530 GTTCGGATAGGGAAGCAGGA 58.879 55.000 0.00 0.00 0.00 3.86
1828 1914 0.106894 GGTTCGGATAGGGAAGCAGG 59.893 60.000 0.00 0.00 40.59 4.85
1829 1915 1.123928 AGGTTCGGATAGGGAAGCAG 58.876 55.000 6.51 0.00 42.68 4.24
1830 1916 2.037144 GTAGGTTCGGATAGGGAAGCA 58.963 52.381 6.51 0.00 42.68 3.91
1831 1917 2.317973 AGTAGGTTCGGATAGGGAAGC 58.682 52.381 0.00 0.00 41.06 3.86
1832 1918 5.506982 CGTAAAGTAGGTTCGGATAGGGAAG 60.507 48.000 0.00 0.00 0.00 3.46
1833 1919 4.339247 CGTAAAGTAGGTTCGGATAGGGAA 59.661 45.833 0.00 0.00 0.00 3.97
1834 1920 3.885297 CGTAAAGTAGGTTCGGATAGGGA 59.115 47.826 0.00 0.00 0.00 4.20
1835 1921 3.633986 ACGTAAAGTAGGTTCGGATAGGG 59.366 47.826 0.00 0.00 0.00 3.53
1836 1922 4.336433 TGACGTAAAGTAGGTTCGGATAGG 59.664 45.833 0.00 0.00 0.00 2.57
1837 1923 5.490139 TGACGTAAAGTAGGTTCGGATAG 57.510 43.478 0.00 0.00 0.00 2.08
1838 1924 7.094634 GGATATGACGTAAAGTAGGTTCGGATA 60.095 40.741 0.00 0.00 0.00 2.59
1839 1925 4.996788 ATGACGTAAAGTAGGTTCGGAT 57.003 40.909 0.00 0.00 0.00 4.18
1840 1926 5.009010 GGATATGACGTAAAGTAGGTTCGGA 59.991 44.000 0.00 0.00 0.00 4.55
1841 1927 5.218139 GGATATGACGTAAAGTAGGTTCGG 58.782 45.833 0.00 0.00 0.00 4.30
1842 1928 5.218139 GGGATATGACGTAAAGTAGGTTCG 58.782 45.833 0.00 0.00 0.00 3.95
1843 1929 6.152932 TGGGATATGACGTAAAGTAGGTTC 57.847 41.667 0.00 0.00 0.00 3.62
1844 1930 6.239515 GGATGGGATATGACGTAAAGTAGGTT 60.240 42.308 0.00 0.00 0.00 3.50
1845 1931 5.245526 GGATGGGATATGACGTAAAGTAGGT 59.754 44.000 0.00 0.00 0.00 3.08
1846 1932 5.480772 AGGATGGGATATGACGTAAAGTAGG 59.519 44.000 0.00 0.00 0.00 3.18
1847 1933 6.591750 AGGATGGGATATGACGTAAAGTAG 57.408 41.667 0.00 0.00 0.00 2.57
1848 1934 7.005902 TGTAGGATGGGATATGACGTAAAGTA 58.994 38.462 0.00 0.00 0.00 2.24
1849 1935 5.836898 TGTAGGATGGGATATGACGTAAAGT 59.163 40.000 0.00 0.00 0.00 2.66
1850 1936 6.340962 TGTAGGATGGGATATGACGTAAAG 57.659 41.667 0.00 0.00 0.00 1.85
1851 1937 6.295632 CCATGTAGGATGGGATATGACGTAAA 60.296 42.308 0.00 0.00 41.22 2.01
1852 1938 5.186992 CCATGTAGGATGGGATATGACGTAA 59.813 44.000 0.00 0.00 41.22 3.18
1853 1939 4.709886 CCATGTAGGATGGGATATGACGTA 59.290 45.833 0.00 0.00 41.22 3.57
1854 1940 3.515502 CCATGTAGGATGGGATATGACGT 59.484 47.826 0.00 0.00 41.22 4.34
1855 1941 3.679917 GCCATGTAGGATGGGATATGACG 60.680 52.174 0.00 0.00 41.22 4.35
1856 1942 3.264193 TGCCATGTAGGATGGGATATGAC 59.736 47.826 0.00 0.00 41.22 3.06
1857 1943 3.530017 TGCCATGTAGGATGGGATATGA 58.470 45.455 0.00 0.00 41.22 2.15
1858 1944 4.204799 CATGCCATGTAGGATGGGATATG 58.795 47.826 7.31 0.00 46.46 1.78
1859 1945 3.854389 ACATGCCATGTAGGATGGGATAT 59.146 43.478 8.96 0.00 46.46 1.63
1860 1946 3.009363 CACATGCCATGTAGGATGGGATA 59.991 47.826 10.53 0.00 46.46 2.59
1862 1948 1.143481 CACATGCCATGTAGGATGGGA 59.857 52.381 10.53 0.00 42.70 4.37
1863 1949 1.143481 TCACATGCCATGTAGGATGGG 59.857 52.381 10.53 4.34 42.70 4.00
1864 1950 2.643995 TCACATGCCATGTAGGATGG 57.356 50.000 10.53 0.00 42.70 3.51
1865 1951 2.292569 GCTTCACATGCCATGTAGGATG 59.707 50.000 10.53 8.11 42.70 3.51
1866 1952 2.092267 TGCTTCACATGCCATGTAGGAT 60.092 45.455 10.53 0.00 42.70 3.24
1867 1953 1.281577 TGCTTCACATGCCATGTAGGA 59.718 47.619 10.53 3.78 42.70 2.94
1868 1954 1.753930 TGCTTCACATGCCATGTAGG 58.246 50.000 10.53 4.91 42.70 3.18
1869 1955 2.946990 TGATGCTTCACATGCCATGTAG 59.053 45.455 10.53 6.62 42.70 2.74
1870 1956 3.002038 TGATGCTTCACATGCCATGTA 57.998 42.857 10.53 0.00 42.70 2.29
1871 1957 1.842052 TGATGCTTCACATGCCATGT 58.158 45.000 4.03 4.03 46.22 3.21
1880 1966 1.612726 AGCCTCAAGGTGATGCTTCAC 60.613 52.381 21.33 21.33 44.11 3.18
1881 1967 0.694771 AGCCTCAAGGTGATGCTTCA 59.305 50.000 0.00 0.00 44.11 3.02
1882 1968 2.698855 TAGCCTCAAGGTGATGCTTC 57.301 50.000 12.29 0.00 44.11 3.86
1883 1969 2.928334 CATAGCCTCAAGGTGATGCTT 58.072 47.619 12.29 0.63 44.11 3.91
1885 1971 0.950116 GCATAGCCTCAAGGTGATGC 59.050 55.000 16.47 16.47 43.18 3.91
1886 1972 2.336945 TGCATAGCCTCAAGGTGATG 57.663 50.000 0.00 3.41 37.57 3.07
1887 1973 3.220110 CAATGCATAGCCTCAAGGTGAT 58.780 45.455 0.00 0.00 37.57 3.06
1888 1974 2.025981 ACAATGCATAGCCTCAAGGTGA 60.026 45.455 0.00 0.00 37.57 4.02
1889 1975 2.372264 ACAATGCATAGCCTCAAGGTG 58.628 47.619 0.00 0.00 37.57 4.00
1890 1976 2.814805 ACAATGCATAGCCTCAAGGT 57.185 45.000 0.00 0.00 37.57 3.50
1891 1977 3.544684 TGTACAATGCATAGCCTCAAGG 58.455 45.455 0.00 0.00 38.53 3.61
1892 1978 4.556104 GCATGTACAATGCATAGCCTCAAG 60.556 45.833 19.12 0.00 44.00 3.02
1893 1979 3.316029 GCATGTACAATGCATAGCCTCAA 59.684 43.478 19.12 0.00 44.00 3.02
1894 1980 2.880268 GCATGTACAATGCATAGCCTCA 59.120 45.455 19.12 0.00 44.00 3.86
1895 1981 2.227388 GGCATGTACAATGCATAGCCTC 59.773 50.000 22.92 7.94 46.21 4.70
1896 1982 2.233271 GGCATGTACAATGCATAGCCT 58.767 47.619 22.92 0.00 46.21 4.58
1897 1983 1.270550 GGGCATGTACAATGCATAGCC 59.729 52.381 22.92 16.30 46.21 3.93
1898 1984 2.227388 GAGGGCATGTACAATGCATAGC 59.773 50.000 22.92 11.42 46.21 2.97
1899 1985 3.479489 TGAGGGCATGTACAATGCATAG 58.521 45.455 22.92 2.93 46.21 2.23
1900 1986 3.479489 CTGAGGGCATGTACAATGCATA 58.521 45.455 22.92 10.89 46.21 3.14
1901 1987 2.304092 CTGAGGGCATGTACAATGCAT 58.696 47.619 22.92 14.98 46.21 3.96
1902 1988 1.682702 CCTGAGGGCATGTACAATGCA 60.683 52.381 22.92 0.00 46.21 3.96
1903 1989 1.027357 CCTGAGGGCATGTACAATGC 58.973 55.000 17.01 17.01 43.85 3.56
1904 1990 1.683943 CCCTGAGGGCATGTACAATG 58.316 55.000 3.66 0.12 35.35 2.82
1917 2003 4.559063 CCATGCCCTCGCCCTGAG 62.559 72.222 0.00 0.00 44.83 3.35
1980 2066 2.528673 TTGATCCACATTGGCATCCA 57.471 45.000 0.00 0.00 37.47 3.41
2009 2095 6.058833 TGAGGCAACACTAACACATTTAAGA 58.941 36.000 0.00 0.00 41.41 2.10
2138 2230 0.456221 CGAGCTCGAGGTGGTAATGT 59.544 55.000 32.06 0.00 43.02 2.71
2178 2270 2.627945 GAATCCATGGCGAGTGTACAA 58.372 47.619 6.96 0.00 0.00 2.41
2245 2337 1.514678 ATCAAGCGCTGCCGACAAAA 61.515 50.000 12.58 0.00 36.29 2.44
2246 2338 1.911293 GATCAAGCGCTGCCGACAAA 61.911 55.000 12.58 0.00 36.29 2.83
2255 2347 1.686052 CCTTCTCCTAGATCAAGCGCT 59.314 52.381 2.64 2.64 0.00 5.92
2266 2358 2.492484 GACGACTTTGCTCCTTCTCCTA 59.508 50.000 0.00 0.00 0.00 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.