>input_sequence_79188
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------------------------------ATGGAAACCTCTGGACGACACGGCGCCTCCGGCTGCTACACCCCTCCCGC
GGCAGACAGGCTCTGGAGGCAGCGCTCCTCTCCCGCAGCTGTTGTGTCCGCCTTCTTGCCGTGCGGCGGCGACGGTGGCC
AGGCGCGAAGAAAGATCAGGAGCGCGCGTCTGGG------TGGGAAGGTCGGGCACCGCAACGGCGAGGAGGCGGAGTTG
GGCCCTGCTGCCTTGCCAGGCG---GCATGGGGTTCGCGCGAGCGCTGTGGATGCAGATCGTCACCAAGGTGATGAGCCG
GAGGGGTTCCTCCGTGAAGGAGCGGTACGCGCAGGAGGATTACGAGCAAAACTTCGACGAGGGCGGCGCGGCTGGGGAGC
CCGAGAACCTCCCGCGGTCCTTCTCCGCGCGGTACGCCCGCCGGCGTCCTGCTGGGATGGCGTTCTCGGATGTAGCTCAC
CGCCTGCGTTTGCATCCTGATTGTGGGTAA--------------------------------------------------
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>chr6B_1_TraesCS6B01G210900
TCTTTGGTGGACCTGCAACTCCTGTATGAAACTGGTTCAAAGTGAATTTCGTGAATTGAAACTGATTCTGACGGAGTGGA
GCAGTCCCAAACAAACCCTTATATATACAATATCAAATATATAAAATATGAAACTATATCTTATGATGAATCTAATAATA
TATGTTTGGTATTTTAGATATAAATATCCCCCCACCCCCCAAACTTGATCAAAGTTTAAGAGGGTTAACTCTTTAGAAAA
CTTACACGCACTATGTCACGAGAGCGACTCACACGTTGCACGCCCGCGCGCGCTCTCTCTCTCTCTCCCTCTCAATTTTT
TTGTTTTGAGAAAATCTCTCCCTCAAGTAATGCTACAACTACGGGGAGTTTTACAGGACGTTTACGGGCTAAGTTGAGAT
GGGCTATTA------GTTAAGGATGAAGCGGGGCCCGTCCTGAAAATCAGGGGGAGAGGGGTTAGTCC------------
-------------------------------------------GTTAAACTCTGTAAAAAATCCTCCGTAAGTCTAGCAT
TTTTCTCTCTCTCTCTGACGAGGAACCCATCTATTATTGCCCCTCATCTCTATGTTGAGAGCAAAAGTGACACTTGAAGG
TCAGAAGCGTGGCTTTCATTTGCCGACGGCTGATCTGACCGCGTGTCTATAACTCTACATCATCCGAGCTTGACAACTCC
CGGAATAATCAAACGTTGATTTTTCCGAGCAGGAACAGAAAGAACATCAGAATGGCATCTCCAGAGTTGAACGCGCGCAC
GCACACAATGGACAATACAGGTCGACGCGGCCAGCTAGCGGCACCAAGCCGCCAACTACCTCCAACGCTAACTACCTCCA
GCTAGCGACACCAA-----GCCGCAACGGTGCACCCCGCAGCCCGCGCTTGACCCGTCGCGATACCGAAGCCCATAGAAC
CAACGTGCTATATAATCACAAGCCGTATCGAGGGGCTTCTCGTCTCCTCATTCCGCCCCCAGCGTCCTTCCTTCAGCGCG
CCGC----CGCCGCCGTGCTGTTATTGCCGATGGAAACCTCTGGACGACACGGCGCCTCCGGCTGCTACACCCCTCCCGC
GGCAGACAGGCTCTGGAGGCAGCGCTCCTCTCCCGCAGCTGTTGTGTCCGCCTTCTTGCCGTGCGGCGGCGACGGTGGCC
AGGCGCGAAGAAAGATCAGGAGCGCGCGTCTGGG------TGGGAAGGTCGGGCACCGCAACGGCGAGGAGGCGGAGTTG
GGCCCTGCTGCCTTGCCAGGCG---GCATGGGGTTCGCGCGAGCGCTGTGGATGCAGATCGTCACCAAGGTGATGAGCCG
GAGGGGTTCCTCCGTGAAGGAGCGGTACGCGCAGGAGGATTACGAGCAAAACTTCGACGAGGGCGGCGCGGCTGGGGAGC
CCGAGAACCTCCCGCGGTCCTTCTCCGCGCGGTACGCCCGCCGGCGTCCTGCTGGGATGGCGTTCTCGGATGTAGCTCAC
CGCCTGCGTTTGCATCCTGATTGTGGGTAATTAAATCTTGTGAGGAGTTTGTGGACATGAGAAACGATCACGTCATCGAC
TCATGGGTGTAGCTCAGACTGGTCTTGTCTTTG------GAAAAGAAAATACGACCATACGTACACATGAGGCCTTCAGC
TCAGACTTCTCAGGGCATGTACAATGGTGGCATATTAATACATATGCCTCATGACAAAAGGTAATTTGAAGTATCTACAT
TTTATTTTTCTCCCCAATGTAAGCTATCACTAATGTGCCTTATAAAAAAATAAAAAATAAAGACTTTAGTACACATGCAT
CTCTACTTTTCACTTCAACCTTTGTCACCGGACCACACTTTTTCTCTTCAAGCACCCGCCTCCAAGAGAGGATCCTGCTT
CCCTATCCGAACCTACTTTACGTCATATCCCATCCTACATGGCATGTGAAGCATCACCTTGAGGCTATGCATTGTACATG
CCCTCAGGGCGAGGGCATGGCCAACGGTTAGCCCGAGACGTGCTGCCTCGCTGGCCAGCTAGGCTTGGATGCCAATGTGG
ATCAAAATCTAATGTCTTAAATGTGTTA--GTGTTGCCTCAGAAAAGTTGACCGC-TTTGGTGAAAAAATGAGGAGAGCG
AGGAAAAAAAAGAAAA---AGAGTGTCCGGACACAGTTGAAGCATGCAGTCAGGCCATGGTCGACAACAACATTACCACC
TCGAGCTCGGCCACTACATGGCCTTGAGCTTGTACACTCGCCATGGATTCGATCTAGTCGGAGCCGAGGTACATCGTGAC
TGGATTTCGGAGAAAATTTTGTCGGCAGCGCTTGATCTAGGAGAAGGAGCAAAGTCGTCGCCTGCCTGCACCGGCCGGGC
CGGTCCAGGGAAATGAGCAAAGTTGTCGCTTGCCTGCACCGCCCTGGCCGGCTGGGGCCATGCCAAGGCGCACCATCACA
TGACCGTTCATTCCGGCAGGAACAACGGAGTTGTCGGCTGCACTAGCCACATGAGGCCTTGAGCTCGTCCATCCTTGGCC
TC
>chr6A_335
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--------------TCTCTCTCTCTCTTAATGCTAGAACTACGGGGAGTTTTACAGGACGTTTACGGCCTAAGCTGAGAT
GGGCTGTTATGATTGGTTAAGGATGAAGCGAGGCCCACCCTAAAAATCAGGAGGAGAGATTAAGGTAAGTCCGTAAGTTA
CTTGCTAAGTTACTCTTATTATGACTAGCCTGAGGGGAGAGGGGTTAAACTCTGTAAAAAATCCTCCGTAAGTCTAGCAT
TTCTCTCTCTCTTTCTGATGAGGAACCCATCTATTATTTTCCCTCGTCTCTCTGTTGAGAGCAAATGTGACACTTCAAGG
TCAGAAGCGTGGCTTTCATTTGCCGACGGCTGACATGACCGCGTGTCTATGACTCTACATCATCCAAGCTTGACAACTCC
CGGAATAATCAAACGTTGATTTTTCCGCGCAGGAACAGAAAGAACATCAGAATGGCATCTCTGGAGTTGAACGCGCGCGC
GCACACAATGGACAATACAGGTCGACGCGGCCAGCTAGCGGCACCAAGCCGCCAACTACCTCCAGCG------CCACCAC
CACGCAGTAGTACCTCCGTGCCGCAGTGGTGCACCCCGCGGCCCGCGCTTGATCCGTCGCCATCCCGAAGCCCGTCGAAC
CAACGTGCTATATAATCACGAGCCGTATCGAGGGGCTTCTCGTCTCCTCC-TCAGCCCCCGGCGTCCTTCCTTCAGCG--
-CGC----CGCCGCCGTGCTATTATTGCCGATGGAAACCTCGGGGCGACACGGCGCCTCCGGCTGCTACACCCCTCCCGC
GGCAGACAGGCTCTGGAGGCAGCGCTCCTCTCCGGCACCTGTTGTGTCCGCCTTCTTGCCGCGCGGCGGCCACGGTGGCC
AGGCGCGAAGAAAGATCAGGAGCGCGCGTCTGGGCGGGATTGGGAAGGTTGGGCACCGCAACGGCGAGGAGGCGGAGTTG
GGCCCTGCTGCCTTGCCAGGCGGCGGCATGGGGTTCGCGCGAGCGCTGTGGATGCGGATCGTCACGAAGGTGATGAGCCG
GAGGGGTTCCTCCGTGAAGGAGCGGTACGCGCAGGAGGATTACGAGCAAAACTTCGACGAGGGCGACGCGGCTGGGGAGC
CCGAGAACCTCCCGCGGTCCTTCTCCGCGCGGTACGCCCGTCGGCGTCCTGCTGGGATGGCGTTCTCGGATATAGCTCAC
CGCCGGCATTTGCATCCTGATTGTGGGTAATTAAATCTTGTGAGGAGTTTGTGGACGTGAGAAACGATCGCGTCATCGAC
TCATGGGTGTAGCTCAGACTGGTCTCTATC---TTTGAAGAAAAAAGAATACTACC------------------------
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>chr6D_576
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----------------------------------------------------------------------------AAGG
TCAGAACCGTGACTTTCATTTGCCGACTGCTGATATGACCGCGTGTCTATAACTCTACATCATCCAAGCTTGACAACTCC
CGGAATAATCAAACGTTGATTTTTCCGAGCAGGAACAGAAAGAACATCAGAATGGCATCTCTGGAGTTGAACGCGCGCAC
GCACACAATGGACAATACAGGGCGACGCGGCCAGCTAGCGGCACCAAGCCGCCAACTACCTCCAGCGGCGCCACCACCAC
CACGCAGTA---CCTCCGTGCCGCAGTGGTGCACCCCGCGGCCCGCGCTTGACCCGTCTCCATCCCGAAGCCCATCGAAC
CAACGTGCTATATAACCACGAGCCGTATCGAGGGGCCTCTCGTCTCCTCC-TCCG-CCCCGGCGTCCTTCCTTCAGAG--
-CGCCGCTCGCCGCCGTGCTGTTATTGCCGATGGAAACCTCGGAACGACACGGCGCCTCCGGCTGCTACACCCCTCCCGC
GGCAGACAGGCTCTGGAGGCAGCGCTCCTCTCCGGCAGCTGTTGTGTCCGCCTTCTTGCCGTGCGGCGGCCACGGTGGCC
AGGCGCGTAGAAAGATCGGGAGCGCGCGCCTGGG------TGGGAAGGTTGGGCACGGCAACGGCGAGGATGCGGAGTTG
GGCCCTGCTGCCTTGCCAGGCGGCGGCATGGGGTTCGCGCGAGCGCTGTGGATGCGGATCGTCACCAAGGTGATGAGCCG
GAGGGGTTCCTCCGTGAAGGAGCGGTACGCGCAGGAGGATTACGAGCAAAACTTCGACGAGGGCGACGCGGCTGGGGAGC
CCGAGAACCTCCCGCGGTCCTTCTCCGCGCGGTACGCCCGCCGGCGCCCTGCTGGGATGGCGTTCTCGGATGTAGCTCAC
CGCCGGCATT------------------------------TGAGGAGTTTGTGGACGTGAGAAGCGATCACGTCATCGAC
TCATGGGTATAGCTCAGACTGGTCTCTATCTTTTTTGAAAAAAAAAGAATACCATCATACGTACACGTACTAGTATTATC
TACCATGTTCTGACCTC---------------------------------------------------------------
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-----------AGGGCATGGCCAACGGTTAGCCCGAGACGTGCTGCCTCGCAGGCCAGCTAGGCTCGGATACCAATGTGG
ATCAAAATCTAATGCCTTAAATGTGTTATAGTGTTGCCTCAGAAAAGTTGACTAC-TTTGGTGAAAAAATGGGGAGAGCG
AGGAAAAAAAAGAGAA---AGAGTGTCCGGACACAGTTGAAGCATGCAGTCAGGCCATGGTCGACAACAGCATTACCACC
TCGAGCTCGGCCACTACATGGCCTTG------TACACTCGCCATGGATTCGATCTAGTCAGAGCCGAGGTACATCATGCC
TGGATTTCGGAGAAAAACTTGTCGGCGGCGCTTGATCCAGGAGAAGGAGCAAAGTTGTCGCCTGCCTGCACCGGCCGGGC
CGGTCCAGGGAAATGAGCAAAGTTGTTGCTTGCCTGCACCGCCCTGGCCGGCTGGGGCCATGCCAAGGCGCACCATCACA
TGACCGTTCATTCCGGCAGGAACAACGGAGTTGTCGGCTGCAGTAACCACATGAGGCCTTGAGCTCGTCCATCCCTGGCC
TC
>chr6A_1968
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----------------------------------------------------GGCCAGCTAGGCTCGGATGCCAGTGTGG
GTCAAAATCTAATGCCTTAAATGTGTTA--GTGTTGCCTCAGA---GTTGACCGCTTTGGGTGAAAAAATGAGGAGAGCG
AGAAAAAAAAGAAGAAGAGAGAGTGTCCGGACACAGTTGAAGCATGCAGGCAGGCCATGGTTGACAGTAGAATTACCACC
TCGAGCTCGGCCACTACATGGCCTTGAGCGTGTCCACTCCCCATGGATTCGATCTATTCGGAGCCGAGGTGCATCGTGAC
TGGATTTCAGAGAAAAGCTTGTCGGCGGCGCTTGATCCAGGAGAAGGAGCAAAGTCGTCGCTTGCCTGCACCGGCCTGGC
CGGTCCAGGGAAATGAGCAAAGTTGTTGCTTGCCCGCACCGCCCTGGCCGGTTGGGGCCATGCCAAGGCGCACCATCACA
TGACCGTTCATTCCGGTAGGAACAACGGAGTTGTCGGCTGCACGAACCACATGAGGCCTTGAATTCGTCCATCCCTGGCC
TC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS------S---SSS--------S-------------------------------S-----S------
-----S------------------------S-----SS---S---------S------SSSSSS--SS------------
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--S---------S-----S-------------------SS-----S-----S-------------S---------S----
----------------------------------S------------------------------S--------------
-------------------------------------------------------------SS-----------------
----------------------------------------------------------------S--SSSS-SS-SS-SS
SSSSSS-SSSSSSS-----------SS------------S--------------------S--S-----------S----
-------------------S-----------------------------SS---------S-----------------SS
S----------------------------------------S--------------------------------------
---------------------------------S------------------------------------S---------
-------------------------------------------------S------------------------------
-------------------------------------------------------S------------------------
-----------------------------------------------------------------S--------------
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----S--S------------------------------------------------S-----------------------
-------------------------SSSSS--S-----------S-S-----S-------------S-SSSSSSS-S-S-
-SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----------------------------------------S-------------S--------------
--------------S-----------------------------------------------------------------
-------------S-------------------------------------------------------S----------
-----------------------------S--------------------------------------------------
----------------SS--------S----------S------------------------------------------
--------------------------S-----------------------------------------------------
---------------------------------------------S----------------------------S-----
--
>forward_890
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----------------------------------------------------------------------ACTACCTCCA
GCTAGCGACA----------------------------------------------------------------------
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--
>reverse_1914
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-------------------------------------------------------------------------CCTGCTT
CCCTATCCGAACC-------------------------------------------------------------------
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--
