Multiple sequence alignment - TraesCS6B01G059200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G059200 chr6B 100.000 2477 0 0 1 2477 39179706 39182182 0.000000e+00 4575.0
1 TraesCS6B01G059200 chr6B 95.833 120 5 0 579 698 601871909 601872028 6.990000e-46 195.0
2 TraesCS6B01G059200 chr6A 87.982 1348 89 33 697 2020 22684340 22685638 0.000000e+00 1524.0
3 TraesCS6B01G059200 chr6A 87.115 357 31 11 2110 2455 22685704 22686056 8.310000e-105 390.0
4 TraesCS6B01G059200 chr6A 92.248 129 10 0 570 698 15623317 15623189 1.510000e-42 183.0
5 TraesCS6B01G059200 chr6A 90.196 51 5 0 54 104 9250701 9250651 1.590000e-07 67.6
6 TraesCS6B01G059200 chr6D 90.067 1188 68 27 697 1878 24219422 24220565 0.000000e+00 1495.0
7 TraesCS6B01G059200 chr6D 85.980 592 43 16 1911 2464 24220562 24221151 4.560000e-167 597.0
8 TraesCS6B01G059200 chr6D 86.885 61 6 2 45 104 8676524 8676583 1.590000e-07 67.6
9 TraesCS6B01G059200 chr5B 82.482 1096 101 44 700 1770 232293658 232294687 0.000000e+00 876.0
10 TraesCS6B01G059200 chr5B 93.478 138 5 4 571 706 559085983 559086118 4.180000e-48 202.0
11 TraesCS6B01G059200 chr5B 92.913 127 9 0 576 702 58806966 58807092 4.210000e-43 185.0
12 TraesCS6B01G059200 chr5B 80.303 198 36 2 45 239 533479439 533479636 1.990000e-31 147.0
13 TraesCS6B01G059200 chr5A 81.720 1116 106 49 697 1787 285395545 285396587 0.000000e+00 841.0
14 TraesCS6B01G059200 chr2B 95.349 129 5 1 574 701 6005712 6005840 1.160000e-48 204.0
15 TraesCS6B01G059200 chr2B 92.366 131 10 0 572 702 58667238 58667108 1.170000e-43 187.0
16 TraesCS6B01G059200 chr7B 95.238 126 6 0 576 701 473399788 473399913 1.500000e-47 200.0
17 TraesCS6B01G059200 chr3B 93.284 134 8 1 577 709 320976848 320976981 1.940000e-46 196.0
18 TraesCS6B01G059200 chr3B 94.400 125 7 0 576 700 334764665 334764789 2.510000e-45 193.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G059200 chr6B 39179706 39182182 2476 False 4575 4575 100.0000 1 2477 1 chr6B.!!$F1 2476
1 TraesCS6B01G059200 chr6A 22684340 22686056 1716 False 957 1524 87.5485 697 2455 2 chr6A.!!$F1 1758
2 TraesCS6B01G059200 chr6D 24219422 24221151 1729 False 1046 1495 88.0235 697 2464 2 chr6D.!!$F2 1767
3 TraesCS6B01G059200 chr5B 232293658 232294687 1029 False 876 876 82.4820 700 1770 1 chr5B.!!$F2 1070
4 TraesCS6B01G059200 chr5A 285395545 285396587 1042 False 841 841 81.7200 697 1787 1 chr5A.!!$F1 1090

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
313 314 0.106619 AGGTACTAGAGGTCCCAGCG 60.107 60.0 0.0 0.0 36.02 5.18 F
314 315 0.106819 GGTACTAGAGGTCCCAGCGA 60.107 60.0 0.0 0.0 0.00 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 1406 0.182775 AACCAACGTCCTCCTGCTTT 59.817 50.0 0.00 0.0 0.00 3.51 R
2176 2266 0.250727 CCTGATGACCGGTTGTGGTT 60.251 55.0 9.42 0.0 44.01 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.940397 TCAATGTCTTTAATTCCTTCTTCCTT 57.060 30.769 0.00 0.00 0.00 3.36
30 31 9.862149 TGTCTTTAATTCCTTCTTCCTTAGTTT 57.138 29.630 0.00 0.00 0.00 2.66
87 88 9.802039 AATAATTGAAGTTGTAGGTTTGTCCTA 57.198 29.630 0.00 0.00 46.10 2.94
99 100 4.338400 AGGTTTGTCCTAAGTCAAACTTGC 59.662 41.667 16.44 4.81 45.51 4.01
100 101 4.338400 GGTTTGTCCTAAGTCAAACTTGCT 59.662 41.667 16.44 0.00 45.51 3.91
101 102 5.505819 GGTTTGTCCTAAGTCAAACTTGCTC 60.506 44.000 16.44 1.42 45.51 4.26
102 103 4.415881 TGTCCTAAGTCAAACTTGCTCA 57.584 40.909 2.65 0.00 39.11 4.26
103 104 4.776349 TGTCCTAAGTCAAACTTGCTCAA 58.224 39.130 2.65 0.00 39.11 3.02
104 105 5.376625 TGTCCTAAGTCAAACTTGCTCAAT 58.623 37.500 2.65 0.00 39.11 2.57
105 106 5.827797 TGTCCTAAGTCAAACTTGCTCAATT 59.172 36.000 2.65 0.00 39.11 2.32
106 107 6.145535 GTCCTAAGTCAAACTTGCTCAATTG 58.854 40.000 0.00 0.00 39.11 2.32
107 108 6.017109 GTCCTAAGTCAAACTTGCTCAATTGA 60.017 38.462 8.12 8.12 39.11 2.57
110 111 4.305989 GTCAAACTTGCTCAATTGACCA 57.694 40.909 3.38 1.01 43.56 4.02
111 112 4.681744 GTCAAACTTGCTCAATTGACCAA 58.318 39.130 14.05 14.05 43.56 3.67
112 113 4.504097 GTCAAACTTGCTCAATTGACCAAC 59.496 41.667 11.36 0.00 43.56 3.77
113 114 4.402155 TCAAACTTGCTCAATTGACCAACT 59.598 37.500 11.36 1.87 0.00 3.16
114 115 4.574599 AACTTGCTCAATTGACCAACTC 57.425 40.909 11.36 0.00 0.00 3.01
115 116 3.825328 ACTTGCTCAATTGACCAACTCT 58.175 40.909 11.36 0.00 0.00 3.24
116 117 4.973168 ACTTGCTCAATTGACCAACTCTA 58.027 39.130 11.36 0.00 0.00 2.43
117 118 5.564550 ACTTGCTCAATTGACCAACTCTAT 58.435 37.500 11.36 0.00 0.00 1.98
118 119 5.413833 ACTTGCTCAATTGACCAACTCTATG 59.586 40.000 11.36 4.84 0.00 2.23
119 120 5.164620 TGCTCAATTGACCAACTCTATGA 57.835 39.130 3.38 0.00 0.00 2.15
120 121 5.559770 TGCTCAATTGACCAACTCTATGAA 58.440 37.500 3.38 0.00 0.00 2.57
121 122 6.003326 TGCTCAATTGACCAACTCTATGAAA 58.997 36.000 3.38 0.00 0.00 2.69
122 123 6.489700 TGCTCAATTGACCAACTCTATGAAAA 59.510 34.615 3.38 0.00 0.00 2.29
123 124 7.014134 TGCTCAATTGACCAACTCTATGAAAAA 59.986 33.333 3.38 0.00 0.00 1.94
146 147 8.604640 AAAATGTGATAACATTTGCAACATCA 57.395 26.923 19.89 0.82 46.08 3.07
147 148 8.604640 AAATGTGATAACATTTGCAACATCAA 57.395 26.923 18.73 0.00 45.36 2.57
148 149 8.604640 AATGTGATAACATTTGCAACATCAAA 57.395 26.923 2.22 0.00 37.03 2.69
149 150 8.780846 ATGTGATAACATTTGCAACATCAAAT 57.219 26.923 0.00 1.77 44.77 2.32
150 151 9.872721 ATGTGATAACATTTGCAACATCAAATA 57.127 25.926 0.00 0.00 42.78 1.40
151 152 9.138062 TGTGATAACATTTGCAACATCAAATAC 57.862 29.630 0.00 0.00 42.78 1.89
152 153 9.138062 GTGATAACATTTGCAACATCAAATACA 57.862 29.630 0.00 0.00 42.78 2.29
153 154 9.138062 TGATAACATTTGCAACATCAAATACAC 57.862 29.630 0.00 0.00 42.78 2.90
154 155 9.138062 GATAACATTTGCAACATCAAATACACA 57.862 29.630 0.00 0.00 42.78 3.72
155 156 7.966246 AACATTTGCAACATCAAATACACAT 57.034 28.000 0.00 0.00 42.78 3.21
157 158 8.692110 ACATTTGCAACATCAAATACACATAG 57.308 30.769 0.00 0.00 42.78 2.23
158 159 8.306038 ACATTTGCAACATCAAATACACATAGT 58.694 29.630 0.00 0.00 42.78 2.12
159 160 9.786105 CATTTGCAACATCAAATACACATAGTA 57.214 29.630 0.00 0.00 42.78 1.82
161 162 9.786105 TTTGCAACATCAAATACACATAGTATG 57.214 29.630 8.66 8.66 42.56 2.39
162 163 8.729805 TGCAACATCAAATACACATAGTATGA 57.270 30.769 17.13 0.00 42.56 2.15
163 164 9.341078 TGCAACATCAAATACACATAGTATGAT 57.659 29.630 17.13 6.98 42.56 2.45
202 203 9.965902 AAAGAATCTCAAGATACTATTTGGTGT 57.034 29.630 0.00 0.00 33.73 4.16
203 204 9.965902 AAGAATCTCAAGATACTATTTGGTGTT 57.034 29.630 0.00 0.00 33.73 3.32
204 205 9.606631 AGAATCTCAAGATACTATTTGGTGTTC 57.393 33.333 0.00 0.00 33.73 3.18
205 206 9.606631 GAATCTCAAGATACTATTTGGTGTTCT 57.393 33.333 0.00 0.00 33.73 3.01
208 209 9.475620 TCTCAAGATACTATTTGGTGTTCTAGA 57.524 33.333 0.00 0.00 0.00 2.43
211 212 9.823647 CAAGATACTATTTGGTGTTCTAGATGT 57.176 33.333 0.00 0.00 0.00 3.06
241 242 8.690680 ATATTCTTCTAGTGACTTCGTCAAAC 57.309 34.615 0.00 0.00 44.49 2.93
242 243 5.769484 TCTTCTAGTGACTTCGTCAAACT 57.231 39.130 0.00 0.00 44.49 2.66
243 244 6.145338 TCTTCTAGTGACTTCGTCAAACTT 57.855 37.500 0.00 0.00 44.49 2.66
244 245 5.977725 TCTTCTAGTGACTTCGTCAAACTTG 59.022 40.000 0.00 0.00 44.49 3.16
245 246 5.509716 TCTAGTGACTTCGTCAAACTTGA 57.490 39.130 0.00 0.00 44.49 3.02
246 247 5.898174 TCTAGTGACTTCGTCAAACTTGAA 58.102 37.500 0.00 0.00 44.49 2.69
247 248 4.859629 AGTGACTTCGTCAAACTTGAAC 57.140 40.909 0.00 0.00 44.49 3.18
248 249 4.250464 AGTGACTTCGTCAAACTTGAACA 58.750 39.130 0.00 0.00 44.49 3.18
249 250 4.693566 AGTGACTTCGTCAAACTTGAACAA 59.306 37.500 0.00 0.00 44.49 2.83
250 251 5.022021 GTGACTTCGTCAAACTTGAACAAG 58.978 41.667 12.22 12.22 44.49 3.16
251 252 4.693566 TGACTTCGTCAAACTTGAACAAGT 59.306 37.500 13.47 13.47 44.18 3.16
252 253 5.870433 TGACTTCGTCAAACTTGAACAAGTA 59.130 36.000 18.43 3.10 43.31 2.24
253 254 6.537301 TGACTTCGTCAAACTTGAACAAGTAT 59.463 34.615 18.43 8.12 43.31 2.12
254 255 6.846283 GACTTCGTCAAACTTGAACAAGTATG 59.154 38.462 18.43 10.14 40.30 2.39
255 256 7.254319 GACTTCGTCAAACTTGAACAAGTATGA 60.254 37.037 18.43 11.94 40.30 2.15
272 273 6.274157 AGTATGACTTGAGACGAATTCAGT 57.726 37.500 6.22 4.50 0.00 3.41
273 274 7.392494 AGTATGACTTGAGACGAATTCAGTA 57.608 36.000 6.22 0.00 0.00 2.74
274 275 7.251994 AGTATGACTTGAGACGAATTCAGTAC 58.748 38.462 6.22 3.93 0.00 2.73
275 276 5.707242 TGACTTGAGACGAATTCAGTACT 57.293 39.130 6.22 0.00 0.00 2.73
276 277 6.085555 TGACTTGAGACGAATTCAGTACTT 57.914 37.500 6.22 0.00 0.00 2.24
277 278 6.150318 TGACTTGAGACGAATTCAGTACTTC 58.850 40.000 6.22 4.77 0.00 3.01
278 279 6.085555 ACTTGAGACGAATTCAGTACTTCA 57.914 37.500 6.22 6.88 0.00 3.02
279 280 6.513180 ACTTGAGACGAATTCAGTACTTCAA 58.487 36.000 6.22 12.48 0.00 2.69
280 281 7.155328 ACTTGAGACGAATTCAGTACTTCAAT 58.845 34.615 6.22 0.00 0.00 2.57
281 282 7.657761 ACTTGAGACGAATTCAGTACTTCAATT 59.342 33.333 6.22 8.66 0.00 2.32
282 283 9.140286 CTTGAGACGAATTCAGTACTTCAATTA 57.860 33.333 6.22 0.00 0.00 1.40
283 284 9.653287 TTGAGACGAATTCAGTACTTCAATTAT 57.347 29.630 6.22 2.77 0.00 1.28
284 285 9.653287 TGAGACGAATTCAGTACTTCAATTATT 57.347 29.630 6.22 1.52 0.00 1.40
305 306 9.828039 ATTATTTTAAAACGGAGGTACTAGAGG 57.172 33.333 1.97 0.00 41.55 3.69
306 307 6.670695 TTTTAAAACGGAGGTACTAGAGGT 57.329 37.500 0.00 0.00 41.55 3.85
307 308 5.904362 TTAAAACGGAGGTACTAGAGGTC 57.096 43.478 0.00 0.00 41.55 3.85
308 309 2.433662 AACGGAGGTACTAGAGGTCC 57.566 55.000 0.00 0.00 41.55 4.46
309 310 0.550432 ACGGAGGTACTAGAGGTCCC 59.450 60.000 0.00 0.00 41.55 4.46
310 311 0.549950 CGGAGGTACTAGAGGTCCCA 59.450 60.000 0.00 0.00 41.55 4.37
311 312 1.477195 CGGAGGTACTAGAGGTCCCAG 60.477 61.905 0.00 0.00 41.55 4.45
312 313 1.694844 GAGGTACTAGAGGTCCCAGC 58.305 60.000 0.00 0.00 41.55 4.85
313 314 0.106619 AGGTACTAGAGGTCCCAGCG 60.107 60.000 0.00 0.00 36.02 5.18
314 315 0.106819 GGTACTAGAGGTCCCAGCGA 60.107 60.000 0.00 0.00 0.00 4.93
315 316 1.684248 GGTACTAGAGGTCCCAGCGAA 60.684 57.143 0.00 0.00 0.00 4.70
316 317 2.097825 GTACTAGAGGTCCCAGCGAAA 58.902 52.381 0.00 0.00 0.00 3.46
317 318 0.896226 ACTAGAGGTCCCAGCGAAAC 59.104 55.000 0.00 0.00 0.00 2.78
318 319 0.895530 CTAGAGGTCCCAGCGAAACA 59.104 55.000 0.00 0.00 0.00 2.83
319 320 1.275291 CTAGAGGTCCCAGCGAAACAA 59.725 52.381 0.00 0.00 0.00 2.83
320 321 0.250338 AGAGGTCCCAGCGAAACAAC 60.250 55.000 0.00 0.00 0.00 3.32
321 322 1.566018 GAGGTCCCAGCGAAACAACG 61.566 60.000 0.00 0.00 0.00 4.10
329 330 3.041940 CGAAACAACGCGCTCCCT 61.042 61.111 5.73 0.00 0.00 4.20
330 331 2.861006 GAAACAACGCGCTCCCTC 59.139 61.111 5.73 0.00 0.00 4.30
331 332 1.668151 GAAACAACGCGCTCCCTCT 60.668 57.895 5.73 0.00 0.00 3.69
332 333 1.901650 GAAACAACGCGCTCCCTCTG 61.902 60.000 5.73 0.00 0.00 3.35
333 334 2.660258 AAACAACGCGCTCCCTCTGT 62.660 55.000 5.73 0.00 0.00 3.41
334 335 1.812686 AACAACGCGCTCCCTCTGTA 61.813 55.000 5.73 0.00 0.00 2.74
335 336 1.141881 CAACGCGCTCCCTCTGTAT 59.858 57.895 5.73 0.00 0.00 2.29
336 337 0.872021 CAACGCGCTCCCTCTGTATC 60.872 60.000 5.73 0.00 0.00 2.24
337 338 1.320344 AACGCGCTCCCTCTGTATCA 61.320 55.000 5.73 0.00 0.00 2.15
338 339 1.320344 ACGCGCTCCCTCTGTATCAA 61.320 55.000 5.73 0.00 0.00 2.57
339 340 0.179111 CGCGCTCCCTCTGTATCAAA 60.179 55.000 5.56 0.00 0.00 2.69
340 341 1.739035 CGCGCTCCCTCTGTATCAAAA 60.739 52.381 5.56 0.00 0.00 2.44
341 342 2.565841 GCGCTCCCTCTGTATCAAAAT 58.434 47.619 0.00 0.00 0.00 1.82
342 343 2.289002 GCGCTCCCTCTGTATCAAAATG 59.711 50.000 0.00 0.00 0.00 2.32
343 344 3.535561 CGCTCCCTCTGTATCAAAATGT 58.464 45.455 0.00 0.00 0.00 2.71
344 345 3.941483 CGCTCCCTCTGTATCAAAATGTT 59.059 43.478 0.00 0.00 0.00 2.71
345 346 5.116180 CGCTCCCTCTGTATCAAAATGTTA 58.884 41.667 0.00 0.00 0.00 2.41
346 347 5.235186 CGCTCCCTCTGTATCAAAATGTTAG 59.765 44.000 0.00 0.00 0.00 2.34
347 348 6.349300 GCTCCCTCTGTATCAAAATGTTAGA 58.651 40.000 0.00 0.00 0.00 2.10
348 349 6.258947 GCTCCCTCTGTATCAAAATGTTAGAC 59.741 42.308 0.00 0.00 0.00 2.59
349 350 6.338146 TCCCTCTGTATCAAAATGTTAGACG 58.662 40.000 0.00 0.00 0.00 4.18
350 351 6.070995 TCCCTCTGTATCAAAATGTTAGACGT 60.071 38.462 0.00 0.00 0.00 4.34
351 352 6.594159 CCCTCTGTATCAAAATGTTAGACGTT 59.406 38.462 0.00 0.00 0.00 3.99
352 353 7.119262 CCCTCTGTATCAAAATGTTAGACGTTT 59.881 37.037 0.00 0.00 38.84 3.60
353 354 8.169268 CCTCTGTATCAAAATGTTAGACGTTTC 58.831 37.037 0.00 0.00 36.39 2.78
354 355 8.596271 TCTGTATCAAAATGTTAGACGTTTCA 57.404 30.769 0.00 0.00 36.39 2.69
355 356 8.708742 TCTGTATCAAAATGTTAGACGTTTCAG 58.291 33.333 0.00 3.09 36.39 3.02
356 357 8.596271 TGTATCAAAATGTTAGACGTTTCAGA 57.404 30.769 0.00 2.34 36.39 3.27
357 358 8.708742 TGTATCAAAATGTTAGACGTTTCAGAG 58.291 33.333 0.00 0.00 36.39 3.35
358 359 6.539649 TCAAAATGTTAGACGTTTCAGAGG 57.460 37.500 0.00 0.00 36.39 3.69
359 360 6.285224 TCAAAATGTTAGACGTTTCAGAGGA 58.715 36.000 0.00 0.00 36.39 3.71
360 361 6.764085 TCAAAATGTTAGACGTTTCAGAGGAA 59.236 34.615 0.00 0.00 36.39 3.36
361 362 6.787085 AAATGTTAGACGTTTCAGAGGAAG 57.213 37.500 0.00 0.00 32.22 3.46
362 363 4.931661 TGTTAGACGTTTCAGAGGAAGT 57.068 40.909 0.00 0.00 33.82 3.01
363 364 6.585695 ATGTTAGACGTTTCAGAGGAAGTA 57.414 37.500 0.00 0.00 33.82 2.24
364 365 6.010294 TGTTAGACGTTTCAGAGGAAGTAG 57.990 41.667 0.00 0.00 33.82 2.57
365 366 5.533903 TGTTAGACGTTTCAGAGGAAGTAGT 59.466 40.000 0.00 0.00 33.82 2.73
366 367 6.712095 TGTTAGACGTTTCAGAGGAAGTAGTA 59.288 38.462 0.00 0.00 33.82 1.82
367 368 5.625921 AGACGTTTCAGAGGAAGTAGTAC 57.374 43.478 0.00 0.00 33.82 2.73
368 369 5.315348 AGACGTTTCAGAGGAAGTAGTACT 58.685 41.667 0.00 0.00 33.82 2.73
369 370 5.769162 AGACGTTTCAGAGGAAGTAGTACTT 59.231 40.000 15.48 15.48 41.95 2.24
370 371 6.939163 AGACGTTTCAGAGGAAGTAGTACTTA 59.061 38.462 15.52 0.00 38.80 2.24
371 372 7.446625 AGACGTTTCAGAGGAAGTAGTACTTAA 59.553 37.037 15.52 2.82 38.80 1.85
372 373 8.120140 ACGTTTCAGAGGAAGTAGTACTTAAT 57.880 34.615 15.52 7.30 38.80 1.40
373 374 8.583296 ACGTTTCAGAGGAAGTAGTACTTAATT 58.417 33.333 15.52 4.55 38.80 1.40
374 375 9.420551 CGTTTCAGAGGAAGTAGTACTTAATTT 57.579 33.333 15.52 2.17 38.80 1.82
434 435 6.380079 ACAGATAATGTTGTCTTTCCTCCT 57.620 37.500 0.00 0.00 39.96 3.69
435 436 6.410540 ACAGATAATGTTGTCTTTCCTCCTC 58.589 40.000 0.00 0.00 39.96 3.71
436 437 5.819901 CAGATAATGTTGTCTTTCCTCCTCC 59.180 44.000 0.00 0.00 0.00 4.30
437 438 5.728741 AGATAATGTTGTCTTTCCTCCTCCT 59.271 40.000 0.00 0.00 0.00 3.69
438 439 3.990959 ATGTTGTCTTTCCTCCTCCTC 57.009 47.619 0.00 0.00 0.00 3.71
439 440 2.689658 TGTTGTCTTTCCTCCTCCTCA 58.310 47.619 0.00 0.00 0.00 3.86
440 441 3.045634 TGTTGTCTTTCCTCCTCCTCAA 58.954 45.455 0.00 0.00 0.00 3.02
441 442 3.071602 TGTTGTCTTTCCTCCTCCTCAAG 59.928 47.826 0.00 0.00 0.00 3.02
489 490 9.675464 AAATTGATAATGCAAATTCATTCACCT 57.325 25.926 0.00 0.00 37.75 4.00
497 498 8.947055 ATGCAAATTCATTCACCTAATTAACC 57.053 30.769 0.00 0.00 0.00 2.85
498 499 7.901029 TGCAAATTCATTCACCTAATTAACCA 58.099 30.769 0.00 0.00 0.00 3.67
499 500 8.034215 TGCAAATTCATTCACCTAATTAACCAG 58.966 33.333 0.00 0.00 0.00 4.00
500 501 8.034804 GCAAATTCATTCACCTAATTAACCAGT 58.965 33.333 0.00 0.00 0.00 4.00
504 505 9.838339 ATTCATTCACCTAATTAACCAGTAGAG 57.162 33.333 0.00 0.00 0.00 2.43
505 506 7.792032 TCATTCACCTAATTAACCAGTAGAGG 58.208 38.462 0.00 0.00 0.00 3.69
506 507 7.402071 TCATTCACCTAATTAACCAGTAGAGGT 59.598 37.037 0.00 0.00 45.91 3.85
507 508 6.786967 TCACCTAATTAACCAGTAGAGGTC 57.213 41.667 0.00 0.00 42.25 3.85
508 509 5.659971 TCACCTAATTAACCAGTAGAGGTCC 59.340 44.000 0.00 0.00 42.25 4.46
509 510 4.967442 ACCTAATTAACCAGTAGAGGTCCC 59.033 45.833 0.00 0.00 42.25 4.46
510 511 4.966805 CCTAATTAACCAGTAGAGGTCCCA 59.033 45.833 0.00 0.00 42.25 4.37
511 512 5.427481 CCTAATTAACCAGTAGAGGTCCCAA 59.573 44.000 0.00 0.00 42.25 4.12
512 513 4.838904 ATTAACCAGTAGAGGTCCCAAC 57.161 45.455 0.00 0.00 42.25 3.77
513 514 0.974383 AACCAGTAGAGGTCCCAACG 59.026 55.000 0.00 0.00 42.25 4.10
514 515 0.113776 ACCAGTAGAGGTCCCAACGA 59.886 55.000 0.00 0.00 37.28 3.85
515 516 1.263356 CCAGTAGAGGTCCCAACGAA 58.737 55.000 0.00 0.00 0.00 3.85
516 517 1.621814 CCAGTAGAGGTCCCAACGAAA 59.378 52.381 0.00 0.00 0.00 3.46
517 518 2.612221 CCAGTAGAGGTCCCAACGAAAC 60.612 54.545 0.00 0.00 0.00 2.78
518 519 2.036733 CAGTAGAGGTCCCAACGAAACA 59.963 50.000 0.00 0.00 0.00 2.83
519 520 2.299297 AGTAGAGGTCCCAACGAAACAG 59.701 50.000 0.00 0.00 0.00 3.16
520 521 0.250338 AGAGGTCCCAACGAAACAGC 60.250 55.000 0.00 0.00 0.00 4.40
521 522 0.534203 GAGGTCCCAACGAAACAGCA 60.534 55.000 0.00 0.00 0.00 4.41
522 523 0.818040 AGGTCCCAACGAAACAGCAC 60.818 55.000 0.00 0.00 0.00 4.40
523 524 0.818040 GGTCCCAACGAAACAGCACT 60.818 55.000 0.00 0.00 0.00 4.40
524 525 0.586802 GTCCCAACGAAACAGCACTC 59.413 55.000 0.00 0.00 0.00 3.51
525 526 0.878523 TCCCAACGAAACAGCACTCG 60.879 55.000 0.00 0.00 40.87 4.18
526 527 1.082756 CCAACGAAACAGCACTCGC 60.083 57.895 0.00 0.00 38.64 5.03
537 538 3.030209 GCACTCGCTCGTGTAATGA 57.970 52.632 4.51 0.00 37.24 2.57
538 539 0.640768 GCACTCGCTCGTGTAATGAC 59.359 55.000 4.51 0.00 37.24 3.06
539 540 1.732732 GCACTCGCTCGTGTAATGACT 60.733 52.381 4.51 0.00 37.24 3.41
540 541 2.477357 GCACTCGCTCGTGTAATGACTA 60.477 50.000 4.51 0.00 37.24 2.59
541 542 3.792459 GCACTCGCTCGTGTAATGACTAT 60.792 47.826 4.51 0.00 37.24 2.12
542 543 4.554134 GCACTCGCTCGTGTAATGACTATA 60.554 45.833 4.51 0.00 37.24 1.31
543 544 5.140872 CACTCGCTCGTGTAATGACTATAG 58.859 45.833 0.00 0.00 0.00 1.31
544 545 4.143194 TCGCTCGTGTAATGACTATAGC 57.857 45.455 0.00 0.00 0.00 2.97
545 546 2.903095 CGCTCGTGTAATGACTATAGCG 59.097 50.000 0.00 8.56 39.39 4.26
546 547 3.606384 CGCTCGTGTAATGACTATAGCGT 60.606 47.826 12.67 0.00 39.98 5.07
547 548 3.664486 GCTCGTGTAATGACTATAGCGTG 59.336 47.826 0.00 0.00 0.00 5.34
548 549 3.624900 TCGTGTAATGACTATAGCGTGC 58.375 45.455 0.00 0.00 0.00 5.34
549 550 3.314357 TCGTGTAATGACTATAGCGTGCT 59.686 43.478 0.00 0.00 0.00 4.40
550 551 3.422217 CGTGTAATGACTATAGCGTGCTG 59.578 47.826 4.25 0.00 0.00 4.41
551 552 4.360563 GTGTAATGACTATAGCGTGCTGT 58.639 43.478 4.25 0.00 0.00 4.40
552 553 4.441415 GTGTAATGACTATAGCGTGCTGTC 59.559 45.833 4.25 4.34 0.00 3.51
553 554 2.802787 ATGACTATAGCGTGCTGTCC 57.197 50.000 4.25 0.00 0.00 4.02
554 555 0.744874 TGACTATAGCGTGCTGTCCC 59.255 55.000 4.25 0.00 0.00 4.46
555 556 0.744874 GACTATAGCGTGCTGTCCCA 59.255 55.000 4.25 0.00 0.00 4.37
556 557 1.136305 GACTATAGCGTGCTGTCCCAA 59.864 52.381 4.25 0.00 0.00 4.12
557 558 1.137086 ACTATAGCGTGCTGTCCCAAG 59.863 52.381 4.25 0.00 0.00 3.61
558 559 0.464036 TATAGCGTGCTGTCCCAAGG 59.536 55.000 4.25 0.00 0.00 3.61
559 560 1.264749 ATAGCGTGCTGTCCCAAGGA 61.265 55.000 4.25 0.00 0.00 3.36
560 561 1.888436 TAGCGTGCTGTCCCAAGGAG 61.888 60.000 4.25 0.00 29.39 3.69
561 562 2.046892 CGTGCTGTCCCAAGGAGG 60.047 66.667 0.00 0.00 29.39 4.30
562 563 2.360475 GTGCTGTCCCAAGGAGGC 60.360 66.667 0.00 2.63 35.39 4.70
563 564 2.853542 TGCTGTCCCAAGGAGGCA 60.854 61.111 7.00 7.00 38.57 4.75
564 565 2.436109 GCTGTCCCAAGGAGGCAA 59.564 61.111 4.31 0.00 33.78 4.52
565 566 1.973812 GCTGTCCCAAGGAGGCAAC 60.974 63.158 4.31 0.00 33.78 4.17
581 582 2.226674 GGCAACTTCACTTCACTTAGGC 59.773 50.000 0.00 0.00 0.00 3.93
582 583 3.142174 GCAACTTCACTTCACTTAGGCT 58.858 45.455 0.00 0.00 0.00 4.58
583 584 3.565902 GCAACTTCACTTCACTTAGGCTT 59.434 43.478 0.00 0.00 0.00 4.35
584 585 4.036852 GCAACTTCACTTCACTTAGGCTTT 59.963 41.667 0.00 0.00 0.00 3.51
585 586 5.514279 CAACTTCACTTCACTTAGGCTTTG 58.486 41.667 0.00 0.00 0.00 2.77
586 587 4.781934 ACTTCACTTCACTTAGGCTTTGT 58.218 39.130 0.00 0.00 0.00 2.83
587 588 5.193679 ACTTCACTTCACTTAGGCTTTGTT 58.806 37.500 0.00 0.00 0.00 2.83
588 589 5.652452 ACTTCACTTCACTTAGGCTTTGTTT 59.348 36.000 0.00 0.00 0.00 2.83
589 590 5.499139 TCACTTCACTTAGGCTTTGTTTG 57.501 39.130 0.00 0.00 0.00 2.93
590 591 4.338118 TCACTTCACTTAGGCTTTGTTTGG 59.662 41.667 0.00 0.00 0.00 3.28
591 592 4.097892 CACTTCACTTAGGCTTTGTTTGGT 59.902 41.667 0.00 0.00 0.00 3.67
592 593 4.709886 ACTTCACTTAGGCTTTGTTTGGTT 59.290 37.500 0.00 0.00 0.00 3.67
593 594 5.889289 ACTTCACTTAGGCTTTGTTTGGTTA 59.111 36.000 0.00 0.00 0.00 2.85
594 595 6.039382 ACTTCACTTAGGCTTTGTTTGGTTAG 59.961 38.462 0.00 0.00 0.00 2.34
595 596 5.442391 TCACTTAGGCTTTGTTTGGTTAGT 58.558 37.500 0.00 0.00 0.00 2.24
596 597 5.529800 TCACTTAGGCTTTGTTTGGTTAGTC 59.470 40.000 0.00 0.00 0.00 2.59
597 598 4.825634 ACTTAGGCTTTGTTTGGTTAGTCC 59.174 41.667 0.00 0.00 0.00 3.85
598 599 2.594131 AGGCTTTGTTTGGTTAGTCCC 58.406 47.619 0.00 0.00 34.77 4.46
599 600 2.091555 AGGCTTTGTTTGGTTAGTCCCA 60.092 45.455 0.00 0.00 34.77 4.37
600 601 2.897326 GGCTTTGTTTGGTTAGTCCCAT 59.103 45.455 0.00 0.00 33.60 4.00
601 602 3.056821 GGCTTTGTTTGGTTAGTCCCATC 60.057 47.826 0.00 0.00 33.60 3.51
602 603 3.056821 GCTTTGTTTGGTTAGTCCCATCC 60.057 47.826 0.00 0.00 33.60 3.51
603 604 2.891191 TGTTTGGTTAGTCCCATCCC 57.109 50.000 0.00 0.00 33.60 3.85
604 605 1.356398 TGTTTGGTTAGTCCCATCCCC 59.644 52.381 0.00 0.00 33.60 4.81
605 606 1.356398 GTTTGGTTAGTCCCATCCCCA 59.644 52.381 0.00 0.00 33.60 4.96
606 607 1.295020 TTGGTTAGTCCCATCCCCAG 58.705 55.000 0.00 0.00 33.60 4.45
607 608 0.419865 TGGTTAGTCCCATCCCCAGA 59.580 55.000 0.00 0.00 34.77 3.86
608 609 1.010793 TGGTTAGTCCCATCCCCAGAT 59.989 52.381 0.00 0.00 34.77 2.90
634 635 3.322501 GGGGGATTTGCAGGGATTT 57.677 52.632 0.00 0.00 0.00 2.17
635 636 1.583556 GGGGGATTTGCAGGGATTTT 58.416 50.000 0.00 0.00 0.00 1.82
636 637 1.210234 GGGGGATTTGCAGGGATTTTG 59.790 52.381 0.00 0.00 0.00 2.44
637 638 1.210234 GGGGATTTGCAGGGATTTTGG 59.790 52.381 0.00 0.00 0.00 3.28
638 639 1.407299 GGGATTTGCAGGGATTTTGGC 60.407 52.381 0.00 0.00 0.00 4.52
639 640 1.278699 GGATTTGCAGGGATTTTGGCA 59.721 47.619 0.00 0.00 0.00 4.92
640 641 2.092807 GGATTTGCAGGGATTTTGGCAT 60.093 45.455 0.00 0.00 35.98 4.40
641 642 2.476126 TTTGCAGGGATTTTGGCATG 57.524 45.000 0.00 0.00 35.98 4.06
642 643 1.350071 TTGCAGGGATTTTGGCATGT 58.650 45.000 0.00 0.00 35.98 3.21
643 644 2.228545 TGCAGGGATTTTGGCATGTA 57.771 45.000 0.00 0.00 0.00 2.29
644 645 2.101783 TGCAGGGATTTTGGCATGTAG 58.898 47.619 0.00 0.00 0.00 2.74
645 646 2.291475 TGCAGGGATTTTGGCATGTAGA 60.291 45.455 0.00 0.00 0.00 2.59
646 647 2.360165 GCAGGGATTTTGGCATGTAGAG 59.640 50.000 0.00 0.00 0.00 2.43
647 648 2.954318 CAGGGATTTTGGCATGTAGAGG 59.046 50.000 0.00 0.00 0.00 3.69
648 649 2.852449 AGGGATTTTGGCATGTAGAGGA 59.148 45.455 0.00 0.00 0.00 3.71
649 650 3.464833 AGGGATTTTGGCATGTAGAGGAT 59.535 43.478 0.00 0.00 0.00 3.24
650 651 4.078980 AGGGATTTTGGCATGTAGAGGATT 60.079 41.667 0.00 0.00 0.00 3.01
651 652 5.134339 AGGGATTTTGGCATGTAGAGGATTA 59.866 40.000 0.00 0.00 0.00 1.75
652 653 5.833131 GGGATTTTGGCATGTAGAGGATTAA 59.167 40.000 0.00 0.00 0.00 1.40
653 654 6.494835 GGGATTTTGGCATGTAGAGGATTAAT 59.505 38.462 0.00 0.00 0.00 1.40
654 655 7.015584 GGGATTTTGGCATGTAGAGGATTAATT 59.984 37.037 0.00 0.00 0.00 1.40
655 656 8.084684 GGATTTTGGCATGTAGAGGATTAATTC 58.915 37.037 0.00 0.00 0.00 2.17
656 657 6.959639 TTTGGCATGTAGAGGATTAATTCC 57.040 37.500 0.00 0.00 45.85 3.01
657 658 4.985538 TGGCATGTAGAGGATTAATTCCC 58.014 43.478 0.00 0.00 46.81 3.97
658 659 4.202567 TGGCATGTAGAGGATTAATTCCCC 60.203 45.833 0.00 0.00 46.81 4.81
659 660 4.336280 GCATGTAGAGGATTAATTCCCCC 58.664 47.826 0.00 0.00 46.81 5.40
660 661 4.043435 GCATGTAGAGGATTAATTCCCCCT 59.957 45.833 0.00 0.00 46.81 4.79
661 662 5.804771 GCATGTAGAGGATTAATTCCCCCTC 60.805 48.000 11.33 11.33 46.81 4.30
662 663 4.903149 TGTAGAGGATTAATTCCCCCTCA 58.097 43.478 18.36 6.42 46.81 3.86
663 664 5.293643 TGTAGAGGATTAATTCCCCCTCAA 58.706 41.667 18.36 5.69 46.81 3.02
664 665 5.917087 TGTAGAGGATTAATTCCCCCTCAAT 59.083 40.000 18.36 6.04 46.81 2.57
665 666 5.590976 AGAGGATTAATTCCCCCTCAATC 57.409 43.478 18.36 5.02 46.81 2.67
666 667 4.355287 AGAGGATTAATTCCCCCTCAATCC 59.645 45.833 18.36 12.05 46.81 3.01
667 668 3.402708 AGGATTAATTCCCCCTCAATCCC 59.597 47.826 9.35 0.00 46.81 3.85
668 669 3.502303 GGATTAATTCCCCCTCAATCCCC 60.502 52.174 3.43 0.00 39.05 4.81
669 670 2.624846 TAATTCCCCCTCAATCCCCT 57.375 50.000 0.00 0.00 0.00 4.79
670 671 1.711684 AATTCCCCCTCAATCCCCTT 58.288 50.000 0.00 0.00 0.00 3.95
671 672 1.235756 ATTCCCCCTCAATCCCCTTC 58.764 55.000 0.00 0.00 0.00 3.46
672 673 0.178816 TTCCCCCTCAATCCCCTTCA 60.179 55.000 0.00 0.00 0.00 3.02
673 674 0.178816 TCCCCCTCAATCCCCTTCAA 60.179 55.000 0.00 0.00 0.00 2.69
674 675 0.936691 CCCCCTCAATCCCCTTCAAT 59.063 55.000 0.00 0.00 0.00 2.57
675 676 1.291939 CCCCCTCAATCCCCTTCAATT 59.708 52.381 0.00 0.00 0.00 2.32
676 677 2.670939 CCCCTCAATCCCCTTCAATTC 58.329 52.381 0.00 0.00 0.00 2.17
677 678 2.670939 CCCTCAATCCCCTTCAATTCC 58.329 52.381 0.00 0.00 0.00 3.01
678 679 2.024080 CCCTCAATCCCCTTCAATTCCA 60.024 50.000 0.00 0.00 0.00 3.53
679 680 3.026694 CCTCAATCCCCTTCAATTCCAC 58.973 50.000 0.00 0.00 0.00 4.02
680 681 3.026694 CTCAATCCCCTTCAATTCCACC 58.973 50.000 0.00 0.00 0.00 4.61
681 682 2.654385 TCAATCCCCTTCAATTCCACCT 59.346 45.455 0.00 0.00 0.00 4.00
682 683 3.026694 CAATCCCCTTCAATTCCACCTC 58.973 50.000 0.00 0.00 0.00 3.85
683 684 1.753903 TCCCCTTCAATTCCACCTCA 58.246 50.000 0.00 0.00 0.00 3.86
684 685 2.069775 TCCCCTTCAATTCCACCTCAA 58.930 47.619 0.00 0.00 0.00 3.02
685 686 2.171003 CCCCTTCAATTCCACCTCAAC 58.829 52.381 0.00 0.00 0.00 3.18
686 687 2.171003 CCCTTCAATTCCACCTCAACC 58.829 52.381 0.00 0.00 0.00 3.77
687 688 1.812571 CCTTCAATTCCACCTCAACCG 59.187 52.381 0.00 0.00 0.00 4.44
688 689 2.552155 CCTTCAATTCCACCTCAACCGA 60.552 50.000 0.00 0.00 0.00 4.69
689 690 2.940994 TCAATTCCACCTCAACCGAA 57.059 45.000 0.00 0.00 0.00 4.30
690 691 2.500229 TCAATTCCACCTCAACCGAAC 58.500 47.619 0.00 0.00 0.00 3.95
691 692 2.158740 TCAATTCCACCTCAACCGAACA 60.159 45.455 0.00 0.00 0.00 3.18
692 693 2.621055 CAATTCCACCTCAACCGAACAA 59.379 45.455 0.00 0.00 0.00 2.83
693 694 1.961793 TTCCACCTCAACCGAACAAG 58.038 50.000 0.00 0.00 0.00 3.16
694 695 0.534203 TCCACCTCAACCGAACAAGC 60.534 55.000 0.00 0.00 0.00 4.01
695 696 1.515521 CCACCTCAACCGAACAAGCC 61.516 60.000 0.00 0.00 0.00 4.35
738 739 4.682787 AGGTCGCTTTCAAAAAGGAAAAG 58.317 39.130 1.96 0.00 36.42 2.27
865 866 2.200370 ACTCCACTGGTCGGTCCA 59.800 61.111 0.00 0.00 45.01 4.02
872 873 0.836400 ACTGGTCGGTCCATCCAACT 60.836 55.000 0.00 0.00 46.12 3.16
892 901 0.397941 CCCCACTCACACAGACACAT 59.602 55.000 0.00 0.00 0.00 3.21
893 902 1.202806 CCCCACTCACACAGACACATT 60.203 52.381 0.00 0.00 0.00 2.71
947 962 3.179869 TTTCCACTGCGCGTGCTTG 62.180 57.895 23.16 17.97 42.42 4.01
950 965 4.731503 CACTGCGCGTGCTTGCTC 62.732 66.667 23.16 0.00 43.34 4.26
952 967 3.796443 CTGCGCGTGCTTGCTCAT 61.796 61.111 23.16 0.00 43.34 2.90
953 968 3.713615 CTGCGCGTGCTTGCTCATC 62.714 63.158 23.16 0.00 43.34 2.92
954 969 3.792047 GCGCGTGCTTGCTCATCA 61.792 61.111 15.02 0.00 38.39 3.07
955 970 2.398429 CGCGTGCTTGCTCATCAG 59.602 61.111 0.00 0.00 0.00 2.90
977 997 2.202236 ATCACCAATCTGCCCGCAGT 62.202 55.000 15.93 1.72 43.96 4.40
991 1011 3.114616 CAGTTCAGCTCACCGCCG 61.115 66.667 0.00 0.00 40.39 6.46
992 1012 4.379243 AGTTCAGCTCACCGCCGG 62.379 66.667 0.00 0.00 40.39 6.13
1056 1076 0.388520 TCAAGGTGATGAGCGTCGTG 60.389 55.000 0.00 0.00 0.00 4.35
1175 1198 3.491652 GAAGCAAGGCCTCGACGC 61.492 66.667 5.23 7.05 0.00 5.19
1329 1352 2.579201 CTGGGCAAGGACGACGAT 59.421 61.111 0.00 0.00 0.00 3.73
1344 1367 1.368950 CGATGCCGTCTCCATGGAT 59.631 57.895 16.63 0.00 0.00 3.41
1360 1383 1.639635 GGATGACATGGTGGCCCTCT 61.640 60.000 0.00 0.00 0.00 3.69
1383 1406 1.486211 GAAGAGGGTCGGAGGATCAA 58.514 55.000 0.00 0.00 36.25 2.57
1398 1421 2.427506 GATCAAAAGCAGGAGGACGTT 58.572 47.619 0.00 0.00 0.00 3.99
1601 1644 8.821686 ATAGAGATCATAGTTGGGTAGATCTG 57.178 38.462 5.18 0.00 43.84 2.90
1621 1664 5.414360 TCTGCTGCTAGTAGTTTTGAGATG 58.586 41.667 9.73 0.00 0.00 2.90
1647 1690 6.235664 GGGTTATCTTCAGGTTGTCTTGTTA 58.764 40.000 0.00 0.00 0.00 2.41
1648 1691 6.884836 GGGTTATCTTCAGGTTGTCTTGTTAT 59.115 38.462 0.00 0.00 0.00 1.89
1649 1692 8.044908 GGGTTATCTTCAGGTTGTCTTGTTATA 58.955 37.037 0.00 0.00 0.00 0.98
1650 1693 9.099454 GGTTATCTTCAGGTTGTCTTGTTATAG 57.901 37.037 0.00 0.00 0.00 1.31
1651 1694 9.099454 GTTATCTTCAGGTTGTCTTGTTATAGG 57.901 37.037 0.00 0.00 0.00 2.57
1652 1695 6.681729 TCTTCAGGTTGTCTTGTTATAGGT 57.318 37.500 0.00 0.00 0.00 3.08
1653 1696 6.464222 TCTTCAGGTTGTCTTGTTATAGGTG 58.536 40.000 0.00 0.00 0.00 4.00
1654 1697 5.160607 TCAGGTTGTCTTGTTATAGGTGG 57.839 43.478 0.00 0.00 0.00 4.61
1655 1698 4.019681 TCAGGTTGTCTTGTTATAGGTGGG 60.020 45.833 0.00 0.00 0.00 4.61
1658 1701 3.343941 TGTCTTGTTATAGGTGGGTGC 57.656 47.619 0.00 0.00 0.00 5.01
1705 1748 6.473758 ACAAGGTAAAGATAGTCCTGGAAAC 58.526 40.000 0.00 0.00 0.00 2.78
1720 1763 4.083484 CCTGGAAACCAAACGAGACAATAC 60.083 45.833 0.00 0.00 30.80 1.89
1727 1770 5.816919 ACCAAACGAGACAATACAAACTTG 58.183 37.500 0.00 0.00 0.00 3.16
1809 1864 3.057734 GCACTCAACTACACCACAGTAC 58.942 50.000 0.00 0.00 0.00 2.73
1830 1885 4.595986 ACCACACCAGGTATTAATTGGAC 58.404 43.478 10.94 0.00 40.98 4.02
1857 1912 0.459237 CTCCGCTGCTCAAGGTACTG 60.459 60.000 0.00 0.00 40.86 2.74
1858 1913 1.185618 TCCGCTGCTCAAGGTACTGT 61.186 55.000 0.00 0.00 40.86 3.55
1881 1936 5.041191 ACTATGATTTCGGCTCTGGAATT 57.959 39.130 0.00 0.00 0.00 2.17
1882 1937 5.059833 ACTATGATTTCGGCTCTGGAATTC 58.940 41.667 0.00 0.00 0.00 2.17
1883 1938 2.643551 TGATTTCGGCTCTGGAATTCC 58.356 47.619 18.17 18.17 0.00 3.01
1884 1939 2.239654 TGATTTCGGCTCTGGAATTCCT 59.760 45.455 24.73 0.40 36.82 3.36
1885 1940 2.879103 TTTCGGCTCTGGAATTCCTT 57.121 45.000 24.73 0.00 36.82 3.36
1886 1941 2.403252 TTCGGCTCTGGAATTCCTTC 57.597 50.000 24.73 10.84 36.82 3.46
1887 1942 1.573108 TCGGCTCTGGAATTCCTTCT 58.427 50.000 24.73 0.00 36.82 2.85
1888 1943 1.909302 TCGGCTCTGGAATTCCTTCTT 59.091 47.619 24.73 0.00 36.82 2.52
1889 1944 3.104512 TCGGCTCTGGAATTCCTTCTTA 58.895 45.455 24.73 3.65 36.82 2.10
1894 1953 5.300539 GGCTCTGGAATTCCTTCTTATTTCC 59.699 44.000 24.73 9.79 37.06 3.13
1897 1956 6.426587 TCTGGAATTCCTTCTTATTTCCCAG 58.573 40.000 24.73 9.93 35.94 4.45
1934 1993 4.205587 AGCCTGGCTTCAAAGATGAATAG 58.794 43.478 17.22 0.00 44.29 1.73
1994 2053 5.674068 GCAAGCAGAAGATTCAGTCAATGAG 60.674 44.000 0.00 0.00 39.68 2.90
2020 2079 3.581332 TGGACCTACTTGAAGGAAATCGT 59.419 43.478 0.00 0.00 39.15 3.73
2021 2080 4.773674 TGGACCTACTTGAAGGAAATCGTA 59.226 41.667 0.00 0.00 39.15 3.43
2027 2086 7.064253 ACCTACTTGAAGGAAATCGTAAATTCG 59.936 37.037 0.00 0.00 39.15 3.34
2028 2087 5.628134 ACTTGAAGGAAATCGTAAATTCGC 58.372 37.500 0.00 0.00 0.00 4.70
2045 2104 4.857871 TTCGCAATCACCGAATTCTAAG 57.142 40.909 3.52 0.00 39.50 2.18
2046 2105 4.118093 TCGCAATCACCGAATTCTAAGA 57.882 40.909 3.52 0.00 0.00 2.10
2049 2114 5.584649 TCGCAATCACCGAATTCTAAGATTT 59.415 36.000 3.52 0.00 0.00 2.17
2052 2117 6.412072 GCAATCACCGAATTCTAAGATTTTCG 59.588 38.462 3.52 5.77 0.00 3.46
2055 2120 5.291128 TCACCGAATTCTAAGATTTTCGAGC 59.709 40.000 3.52 0.00 0.00 5.03
2079 2144 6.204359 CAATATGCATTGCCAGACTTAAGTC 58.796 40.000 25.24 25.24 38.96 3.01
2106 2171 3.445008 AGGCTCTTGTGTGATCTCCTTA 58.555 45.455 0.00 0.00 0.00 2.69
2112 2200 4.774726 TCTTGTGTGATCTCCTTAGAGCTT 59.225 41.667 0.00 0.00 38.98 3.74
2122 2210 4.287067 TCTCCTTAGAGCTTCCACAACATT 59.713 41.667 0.00 0.00 40.22 2.71
2174 2264 3.357079 CTCACCTGTGCCGCCAAC 61.357 66.667 0.00 0.00 0.00 3.77
2181 2271 4.279043 GTGCCGCCAACCAACCAC 62.279 66.667 0.00 0.00 0.00 4.16
2183 2273 3.532155 GCCGCCAACCAACCACAA 61.532 61.111 0.00 0.00 0.00 3.33
2202 2292 0.904865 ACCGGTCATCAGGCAGAGAA 60.905 55.000 0.00 0.00 32.18 2.87
2242 2334 2.097825 GCCCTGCTGTCAATTTGAGAT 58.902 47.619 0.00 0.00 0.00 2.75
2436 2540 2.032799 GCTCGTTGAAATGGACACACAA 59.967 45.455 0.00 0.00 0.00 3.33
2455 2559 2.951642 CAAGCCAACAAGAACAGAGGAA 59.048 45.455 0.00 0.00 0.00 3.36
2473 2577 1.725066 AAAAACAGGACACACGCCG 59.275 52.632 0.00 0.00 0.00 6.46
2474 2578 1.720694 AAAAACAGGACACACGCCGG 61.721 55.000 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.940397 AAGGAAGAAGGAATTAAAGACATTGA 57.060 30.769 0.00 0.00 0.00 2.57
4 5 9.862149 AAACTAAGGAAGAAGGAATTAAAGACA 57.138 29.630 0.00 0.00 0.00 3.41
79 80 5.189928 TGAGCAAGTTTGACTTAGGACAAA 58.810 37.500 0.00 0.00 36.03 2.83
80 81 4.776349 TGAGCAAGTTTGACTTAGGACAA 58.224 39.130 0.00 0.00 36.03 3.18
81 82 4.415881 TGAGCAAGTTTGACTTAGGACA 57.584 40.909 0.00 0.00 36.03 4.02
82 83 5.948992 ATTGAGCAAGTTTGACTTAGGAC 57.051 39.130 0.00 0.00 36.03 3.85
83 84 6.017109 GTCAATTGAGCAAGTTTGACTTAGGA 60.017 38.462 8.80 0.00 42.82 2.94
84 85 6.145535 GTCAATTGAGCAAGTTTGACTTAGG 58.854 40.000 8.80 0.00 42.82 2.69
85 86 6.145535 GGTCAATTGAGCAAGTTTGACTTAG 58.854 40.000 28.19 0.00 44.57 2.18
86 87 6.072112 GGTCAATTGAGCAAGTTTGACTTA 57.928 37.500 28.19 0.00 44.57 2.24
87 88 4.936891 GGTCAATTGAGCAAGTTTGACTT 58.063 39.130 28.19 0.00 44.57 3.01
88 89 4.574599 GGTCAATTGAGCAAGTTTGACT 57.425 40.909 28.19 0.00 44.57 3.41
98 99 6.500684 TTTCATAGAGTTGGTCAATTGAGC 57.499 37.500 26.86 26.86 42.48 4.26
124 125 8.780846 ATTTGATGTTGCAAATGTTATCACAT 57.219 26.923 0.00 0.00 46.34 3.21
125 126 9.138062 GTATTTGATGTTGCAAATGTTATCACA 57.862 29.630 0.00 0.98 45.31 3.58
126 127 9.138062 TGTATTTGATGTTGCAAATGTTATCAC 57.862 29.630 0.00 0.00 45.31 3.06
127 128 9.138062 GTGTATTTGATGTTGCAAATGTTATCA 57.862 29.630 0.00 4.25 45.31 2.15
128 129 9.138062 TGTGTATTTGATGTTGCAAATGTTATC 57.862 29.630 0.00 1.59 45.31 1.75
129 130 9.656040 ATGTGTATTTGATGTTGCAAATGTTAT 57.344 25.926 0.00 0.00 45.31 1.89
131 132 7.966246 ATGTGTATTTGATGTTGCAAATGTT 57.034 28.000 0.00 0.00 45.31 2.71
132 133 8.306038 ACTATGTGTATTTGATGTTGCAAATGT 58.694 29.630 0.00 0.00 45.31 2.71
133 134 8.692110 ACTATGTGTATTTGATGTTGCAAATG 57.308 30.769 0.00 0.00 45.31 2.32
135 136 9.786105 CATACTATGTGTATTTGATGTTGCAAA 57.214 29.630 0.00 0.00 39.66 3.68
136 137 9.171877 TCATACTATGTGTATTTGATGTTGCAA 57.828 29.630 0.00 0.00 39.66 4.08
137 138 8.729805 TCATACTATGTGTATTTGATGTTGCA 57.270 30.769 0.00 0.00 39.66 4.08
176 177 9.965902 ACACCAAATAGTATCTTGAGATTCTTT 57.034 29.630 5.61 0.00 34.63 2.52
177 178 9.965902 AACACCAAATAGTATCTTGAGATTCTT 57.034 29.630 5.61 0.00 34.63 2.52
178 179 9.606631 GAACACCAAATAGTATCTTGAGATTCT 57.393 33.333 0.00 2.40 36.39 2.40
179 180 9.606631 AGAACACCAAATAGTATCTTGAGATTC 57.393 33.333 0.00 0.00 36.05 2.52
182 183 9.475620 TCTAGAACACCAAATAGTATCTTGAGA 57.524 33.333 0.00 0.00 0.00 3.27
185 186 9.823647 ACATCTAGAACACCAAATAGTATCTTG 57.176 33.333 0.00 0.00 0.00 3.02
229 230 6.340537 TACTTGTTCAAGTTTGACGAAGTC 57.659 37.500 20.66 0.00 45.08 3.01
230 231 6.537301 TCATACTTGTTCAAGTTTGACGAAGT 59.463 34.615 23.94 16.13 39.89 3.01
231 232 6.846283 GTCATACTTGTTCAAGTTTGACGAAG 59.154 38.462 31.61 12.96 45.01 3.79
232 233 6.711579 GTCATACTTGTTCAAGTTTGACGAA 58.288 36.000 31.61 16.03 45.01 3.85
233 234 6.281848 GTCATACTTGTTCAAGTTTGACGA 57.718 37.500 31.61 17.67 45.01 4.20
248 249 6.692486 ACTGAATTCGTCTCAAGTCATACTT 58.308 36.000 0.04 0.00 39.39 2.24
249 250 6.274157 ACTGAATTCGTCTCAAGTCATACT 57.726 37.500 0.04 0.00 30.42 2.12
250 251 7.251994 AGTACTGAATTCGTCTCAAGTCATAC 58.748 38.462 0.00 0.00 30.42 2.39
251 252 7.392494 AGTACTGAATTCGTCTCAAGTCATA 57.608 36.000 0.00 0.00 30.42 2.15
252 253 6.274157 AGTACTGAATTCGTCTCAAGTCAT 57.726 37.500 0.00 0.00 30.42 3.06
253 254 5.707242 AGTACTGAATTCGTCTCAAGTCA 57.293 39.130 0.00 0.00 0.00 3.41
254 255 6.150318 TGAAGTACTGAATTCGTCTCAAGTC 58.850 40.000 0.00 0.00 0.00 3.01
255 256 6.085555 TGAAGTACTGAATTCGTCTCAAGT 57.914 37.500 0.00 0.18 0.00 3.16
256 257 7.588143 ATTGAAGTACTGAATTCGTCTCAAG 57.412 36.000 0.00 7.29 0.00 3.02
257 258 7.962964 AATTGAAGTACTGAATTCGTCTCAA 57.037 32.000 0.00 15.83 0.00 3.02
258 259 9.653287 AATAATTGAAGTACTGAATTCGTCTCA 57.347 29.630 13.74 1.17 0.00 3.27
279 280 9.828039 CCTCTAGTACCTCCGTTTTAAAATAAT 57.172 33.333 3.52 0.00 0.00 1.28
280 281 8.815912 ACCTCTAGTACCTCCGTTTTAAAATAA 58.184 33.333 3.52 0.00 0.00 1.40
281 282 8.366359 ACCTCTAGTACCTCCGTTTTAAAATA 57.634 34.615 3.52 0.00 0.00 1.40
282 283 7.250032 ACCTCTAGTACCTCCGTTTTAAAAT 57.750 36.000 3.52 0.00 0.00 1.82
283 284 6.295292 GGACCTCTAGTACCTCCGTTTTAAAA 60.295 42.308 0.00 0.00 0.00 1.52
284 285 5.185828 GGACCTCTAGTACCTCCGTTTTAAA 59.814 44.000 0.00 0.00 0.00 1.52
285 286 4.706962 GGACCTCTAGTACCTCCGTTTTAA 59.293 45.833 0.00 0.00 0.00 1.52
286 287 4.273318 GGACCTCTAGTACCTCCGTTTTA 58.727 47.826 0.00 0.00 0.00 1.52
287 288 3.095332 GGACCTCTAGTACCTCCGTTTT 58.905 50.000 0.00 0.00 0.00 2.43
288 289 2.732763 GGACCTCTAGTACCTCCGTTT 58.267 52.381 0.00 0.00 0.00 3.60
289 290 2.433662 GGACCTCTAGTACCTCCGTT 57.566 55.000 0.00 0.00 0.00 4.44
296 297 1.760192 TTCGCTGGGACCTCTAGTAC 58.240 55.000 0.00 0.00 0.00 2.73
297 298 2.097825 GTTTCGCTGGGACCTCTAGTA 58.902 52.381 0.00 0.00 0.00 1.82
298 299 0.896226 GTTTCGCTGGGACCTCTAGT 59.104 55.000 0.00 0.00 0.00 2.57
299 300 0.895530 TGTTTCGCTGGGACCTCTAG 59.104 55.000 0.00 0.00 0.00 2.43
300 301 1.001633 GTTGTTTCGCTGGGACCTCTA 59.998 52.381 0.00 0.00 0.00 2.43
301 302 0.250338 GTTGTTTCGCTGGGACCTCT 60.250 55.000 0.00 0.00 0.00 3.69
302 303 1.566018 CGTTGTTTCGCTGGGACCTC 61.566 60.000 0.00 0.00 0.00 3.85
303 304 1.597027 CGTTGTTTCGCTGGGACCT 60.597 57.895 0.00 0.00 0.00 3.85
304 305 2.943653 CGTTGTTTCGCTGGGACC 59.056 61.111 0.00 0.00 0.00 4.46
312 313 3.011760 GAGGGAGCGCGTTGTTTCG 62.012 63.158 8.43 0.00 0.00 3.46
313 314 1.668151 AGAGGGAGCGCGTTGTTTC 60.668 57.895 8.43 0.66 0.00 2.78
314 315 1.961277 CAGAGGGAGCGCGTTGTTT 60.961 57.895 8.43 0.00 0.00 2.83
315 316 1.812686 TACAGAGGGAGCGCGTTGTT 61.813 55.000 8.43 0.00 0.00 2.83
316 317 1.605058 ATACAGAGGGAGCGCGTTGT 61.605 55.000 8.43 4.31 0.00 3.32
317 318 0.872021 GATACAGAGGGAGCGCGTTG 60.872 60.000 8.43 0.00 0.00 4.10
318 319 1.320344 TGATACAGAGGGAGCGCGTT 61.320 55.000 8.43 0.00 0.00 4.84
319 320 1.320344 TTGATACAGAGGGAGCGCGT 61.320 55.000 8.43 0.00 0.00 6.01
320 321 0.179111 TTTGATACAGAGGGAGCGCG 60.179 55.000 0.00 0.00 0.00 6.86
321 322 2.024176 TTTTGATACAGAGGGAGCGC 57.976 50.000 0.00 0.00 0.00 5.92
322 323 3.535561 ACATTTTGATACAGAGGGAGCG 58.464 45.455 0.00 0.00 0.00 5.03
323 324 6.258947 GTCTAACATTTTGATACAGAGGGAGC 59.741 42.308 0.00 0.00 0.00 4.70
324 325 6.477033 CGTCTAACATTTTGATACAGAGGGAG 59.523 42.308 0.00 0.00 0.00 4.30
325 326 6.070995 ACGTCTAACATTTTGATACAGAGGGA 60.071 38.462 0.00 0.00 0.00 4.20
326 327 6.106673 ACGTCTAACATTTTGATACAGAGGG 58.893 40.000 0.00 0.00 0.00 4.30
327 328 7.596749 AACGTCTAACATTTTGATACAGAGG 57.403 36.000 0.00 0.00 0.00 3.69
328 329 8.708742 TGAAACGTCTAACATTTTGATACAGAG 58.291 33.333 0.00 0.00 0.00 3.35
329 330 8.596271 TGAAACGTCTAACATTTTGATACAGA 57.404 30.769 0.00 0.00 0.00 3.41
330 331 8.708742 TCTGAAACGTCTAACATTTTGATACAG 58.291 33.333 0.00 0.00 0.00 2.74
331 332 8.596271 TCTGAAACGTCTAACATTTTGATACA 57.404 30.769 0.00 0.00 0.00 2.29
332 333 8.169268 CCTCTGAAACGTCTAACATTTTGATAC 58.831 37.037 0.00 0.00 0.00 2.24
333 334 8.092068 TCCTCTGAAACGTCTAACATTTTGATA 58.908 33.333 0.00 0.00 0.00 2.15
334 335 6.934645 TCCTCTGAAACGTCTAACATTTTGAT 59.065 34.615 0.00 0.00 0.00 2.57
335 336 6.285224 TCCTCTGAAACGTCTAACATTTTGA 58.715 36.000 0.00 0.00 0.00 2.69
336 337 6.539649 TCCTCTGAAACGTCTAACATTTTG 57.460 37.500 0.00 0.00 0.00 2.44
337 338 6.766467 ACTTCCTCTGAAACGTCTAACATTTT 59.234 34.615 0.00 0.00 0.00 1.82
338 339 6.289064 ACTTCCTCTGAAACGTCTAACATTT 58.711 36.000 0.00 0.00 0.00 2.32
339 340 5.855045 ACTTCCTCTGAAACGTCTAACATT 58.145 37.500 0.00 0.00 0.00 2.71
340 341 5.470047 ACTTCCTCTGAAACGTCTAACAT 57.530 39.130 0.00 0.00 0.00 2.71
341 342 4.931661 ACTTCCTCTGAAACGTCTAACA 57.068 40.909 0.00 0.00 0.00 2.41
342 343 6.011476 ACTACTTCCTCTGAAACGTCTAAC 57.989 41.667 0.00 0.00 0.00 2.34
343 344 6.939163 AGTACTACTTCCTCTGAAACGTCTAA 59.061 38.462 0.00 0.00 0.00 2.10
344 345 6.471146 AGTACTACTTCCTCTGAAACGTCTA 58.529 40.000 0.00 0.00 0.00 2.59
345 346 5.315348 AGTACTACTTCCTCTGAAACGTCT 58.685 41.667 0.00 0.00 0.00 4.18
346 347 5.625921 AGTACTACTTCCTCTGAAACGTC 57.374 43.478 0.00 0.00 0.00 4.34
347 348 7.516198 TTAAGTACTACTTCCTCTGAAACGT 57.484 36.000 4.65 0.00 39.51 3.99
348 349 8.983307 AATTAAGTACTACTTCCTCTGAAACG 57.017 34.615 4.65 0.00 39.51 3.60
411 412 6.380079 AGGAGGAAAGACAACATTATCTGT 57.620 37.500 0.00 0.00 40.84 3.41
412 413 5.819901 GGAGGAGGAAAGACAACATTATCTG 59.180 44.000 0.00 0.00 0.00 2.90
413 414 5.728741 AGGAGGAGGAAAGACAACATTATCT 59.271 40.000 0.00 0.00 0.00 1.98
414 415 5.995446 AGGAGGAGGAAAGACAACATTATC 58.005 41.667 0.00 0.00 0.00 1.75
415 416 5.488919 TGAGGAGGAGGAAAGACAACATTAT 59.511 40.000 0.00 0.00 0.00 1.28
416 417 4.844085 TGAGGAGGAGGAAAGACAACATTA 59.156 41.667 0.00 0.00 0.00 1.90
417 418 3.652869 TGAGGAGGAGGAAAGACAACATT 59.347 43.478 0.00 0.00 0.00 2.71
418 419 3.251484 TGAGGAGGAGGAAAGACAACAT 58.749 45.455 0.00 0.00 0.00 2.71
419 420 2.689658 TGAGGAGGAGGAAAGACAACA 58.310 47.619 0.00 0.00 0.00 3.33
420 421 3.669536 CTTGAGGAGGAGGAAAGACAAC 58.330 50.000 0.00 0.00 0.00 3.32
463 464 9.675464 AGGTGAATGAATTTGCATTATCAATTT 57.325 25.926 0.00 0.00 38.53 1.82
471 472 9.382275 GGTTAATTAGGTGAATGAATTTGCATT 57.618 29.630 0.00 0.00 40.96 3.56
472 473 8.538701 TGGTTAATTAGGTGAATGAATTTGCAT 58.461 29.630 0.00 0.00 0.00 3.96
473 474 7.901029 TGGTTAATTAGGTGAATGAATTTGCA 58.099 30.769 0.00 0.00 0.00 4.08
474 475 8.034804 ACTGGTTAATTAGGTGAATGAATTTGC 58.965 33.333 0.00 0.00 0.00 3.68
478 479 9.838339 CTCTACTGGTTAATTAGGTGAATGAAT 57.162 33.333 0.00 0.00 0.00 2.57
479 480 8.265055 CCTCTACTGGTTAATTAGGTGAATGAA 58.735 37.037 0.00 0.00 0.00 2.57
480 481 7.402071 ACCTCTACTGGTTAATTAGGTGAATGA 59.598 37.037 0.00 0.00 36.89 2.57
481 482 7.565680 ACCTCTACTGGTTAATTAGGTGAATG 58.434 38.462 0.00 0.00 36.89 2.67
482 483 7.147532 GGACCTCTACTGGTTAATTAGGTGAAT 60.148 40.741 0.00 0.00 41.00 2.57
483 484 6.155737 GGACCTCTACTGGTTAATTAGGTGAA 59.844 42.308 0.00 0.00 41.00 3.18
484 485 5.659971 GGACCTCTACTGGTTAATTAGGTGA 59.340 44.000 0.00 0.00 41.00 4.02
485 486 5.163332 GGGACCTCTACTGGTTAATTAGGTG 60.163 48.000 0.00 0.00 41.00 4.00
486 487 4.967442 GGGACCTCTACTGGTTAATTAGGT 59.033 45.833 0.00 0.00 41.00 3.08
487 488 4.966805 TGGGACCTCTACTGGTTAATTAGG 59.033 45.833 0.00 0.00 41.00 2.69
488 489 6.346896 GTTGGGACCTCTACTGGTTAATTAG 58.653 44.000 0.00 0.00 41.00 1.73
489 490 5.105228 CGTTGGGACCTCTACTGGTTAATTA 60.105 44.000 0.00 0.00 41.00 1.40
490 491 4.323257 CGTTGGGACCTCTACTGGTTAATT 60.323 45.833 0.00 0.00 41.00 1.40
491 492 3.197116 CGTTGGGACCTCTACTGGTTAAT 59.803 47.826 0.00 0.00 41.00 1.40
492 493 2.564062 CGTTGGGACCTCTACTGGTTAA 59.436 50.000 0.00 0.00 41.00 2.01
493 494 2.173519 CGTTGGGACCTCTACTGGTTA 58.826 52.381 0.00 0.00 41.00 2.85
494 495 0.974383 CGTTGGGACCTCTACTGGTT 59.026 55.000 0.00 0.00 41.00 3.67
495 496 0.113776 TCGTTGGGACCTCTACTGGT 59.886 55.000 0.00 0.00 44.10 4.00
496 497 1.263356 TTCGTTGGGACCTCTACTGG 58.737 55.000 0.00 0.00 0.00 4.00
497 498 2.036733 TGTTTCGTTGGGACCTCTACTG 59.963 50.000 0.00 0.00 0.00 2.74
498 499 2.299297 CTGTTTCGTTGGGACCTCTACT 59.701 50.000 0.00 0.00 0.00 2.57
499 500 2.685100 CTGTTTCGTTGGGACCTCTAC 58.315 52.381 0.00 0.00 0.00 2.59
500 501 1.001633 GCTGTTTCGTTGGGACCTCTA 59.998 52.381 0.00 0.00 0.00 2.43
501 502 0.250338 GCTGTTTCGTTGGGACCTCT 60.250 55.000 0.00 0.00 0.00 3.69
502 503 0.534203 TGCTGTTTCGTTGGGACCTC 60.534 55.000 0.00 0.00 0.00 3.85
503 504 0.818040 GTGCTGTTTCGTTGGGACCT 60.818 55.000 0.00 0.00 0.00 3.85
504 505 0.818040 AGTGCTGTTTCGTTGGGACC 60.818 55.000 0.00 0.00 0.00 4.46
505 506 0.586802 GAGTGCTGTTTCGTTGGGAC 59.413 55.000 0.00 0.00 0.00 4.46
506 507 0.878523 CGAGTGCTGTTTCGTTGGGA 60.879 55.000 0.00 0.00 32.44 4.37
507 508 1.569493 CGAGTGCTGTTTCGTTGGG 59.431 57.895 0.00 0.00 32.44 4.12
508 509 1.082756 GCGAGTGCTGTTTCGTTGG 60.083 57.895 0.00 0.00 38.96 3.77
509 510 4.496898 GCGAGTGCTGTTTCGTTG 57.503 55.556 0.00 0.00 38.96 4.10
519 520 0.640768 GTCATTACACGAGCGAGTGC 59.359 55.000 13.25 0.00 45.45 4.40
520 521 2.264109 AGTCATTACACGAGCGAGTG 57.736 50.000 12.03 12.03 46.83 3.51
521 522 4.319622 GCTATAGTCATTACACGAGCGAGT 60.320 45.833 0.84 0.00 0.00 4.18
522 523 4.152526 GCTATAGTCATTACACGAGCGAG 58.847 47.826 0.84 0.00 0.00 5.03
523 524 3.363673 CGCTATAGTCATTACACGAGCGA 60.364 47.826 7.12 0.00 44.81 4.93
524 525 2.903095 CGCTATAGTCATTACACGAGCG 59.097 50.000 0.84 0.00 40.34 5.03
525 526 3.664486 CACGCTATAGTCATTACACGAGC 59.336 47.826 0.84 0.00 0.00 5.03
526 527 3.664486 GCACGCTATAGTCATTACACGAG 59.336 47.826 0.84 0.00 0.00 4.18
527 528 3.314357 AGCACGCTATAGTCATTACACGA 59.686 43.478 0.84 0.00 0.00 4.35
528 529 3.422217 CAGCACGCTATAGTCATTACACG 59.578 47.826 0.84 0.00 0.00 4.49
529 530 4.360563 ACAGCACGCTATAGTCATTACAC 58.639 43.478 0.84 0.00 0.00 2.90
530 531 4.499188 GGACAGCACGCTATAGTCATTACA 60.499 45.833 0.84 0.00 0.00 2.41
531 532 3.982058 GGACAGCACGCTATAGTCATTAC 59.018 47.826 0.84 0.00 0.00 1.89
532 533 3.005472 GGGACAGCACGCTATAGTCATTA 59.995 47.826 0.84 0.00 0.00 1.90
533 534 2.224066 GGGACAGCACGCTATAGTCATT 60.224 50.000 0.84 0.00 0.00 2.57
534 535 1.341531 GGGACAGCACGCTATAGTCAT 59.658 52.381 0.84 0.00 0.00 3.06
535 536 0.744874 GGGACAGCACGCTATAGTCA 59.255 55.000 0.84 0.00 0.00 3.41
536 537 0.744874 TGGGACAGCACGCTATAGTC 59.255 55.000 0.84 0.00 0.00 2.59
537 538 1.137086 CTTGGGACAGCACGCTATAGT 59.863 52.381 0.84 0.00 42.39 2.12
538 539 1.539065 CCTTGGGACAGCACGCTATAG 60.539 57.143 0.00 0.00 42.39 1.31
539 540 0.464036 CCTTGGGACAGCACGCTATA 59.536 55.000 0.00 0.00 42.39 1.31
540 541 1.221840 CCTTGGGACAGCACGCTAT 59.778 57.895 0.00 0.00 42.39 2.97
541 542 1.888436 CTCCTTGGGACAGCACGCTA 61.888 60.000 0.00 0.00 42.39 4.26
542 543 3.241530 TCCTTGGGACAGCACGCT 61.242 61.111 0.00 0.00 42.39 5.07
543 544 2.743928 CTCCTTGGGACAGCACGC 60.744 66.667 0.00 0.00 42.39 5.34
544 545 2.046892 CCTCCTTGGGACAGCACG 60.047 66.667 0.00 0.00 42.39 5.34
545 546 2.360475 GCCTCCTTGGGACAGCAC 60.360 66.667 0.00 0.00 42.39 4.40
546 547 2.459969 TTGCCTCCTTGGGACAGCA 61.460 57.895 3.34 3.34 42.39 4.41
547 548 1.973812 GTTGCCTCCTTGGGACAGC 60.974 63.158 0.00 0.00 42.39 4.40
548 549 0.111253 AAGTTGCCTCCTTGGGACAG 59.889 55.000 0.00 0.00 42.39 3.51
549 550 0.110486 GAAGTTGCCTCCTTGGGACA 59.890 55.000 0.00 0.00 35.25 4.02
550 551 0.110486 TGAAGTTGCCTCCTTGGGAC 59.890 55.000 0.00 0.00 35.25 4.46
551 552 0.110486 GTGAAGTTGCCTCCTTGGGA 59.890 55.000 0.00 0.00 36.00 4.37
552 553 0.111253 AGTGAAGTTGCCTCCTTGGG 59.889 55.000 0.00 0.00 36.00 4.12
553 554 1.882623 GAAGTGAAGTTGCCTCCTTGG 59.117 52.381 0.00 0.00 39.35 3.61
554 555 2.291741 GTGAAGTGAAGTTGCCTCCTTG 59.708 50.000 0.00 0.00 0.00 3.61
555 556 2.173569 AGTGAAGTGAAGTTGCCTCCTT 59.826 45.455 0.00 0.00 0.00 3.36
556 557 1.771255 AGTGAAGTGAAGTTGCCTCCT 59.229 47.619 0.00 0.00 0.00 3.69
557 558 2.262423 AGTGAAGTGAAGTTGCCTCC 57.738 50.000 0.00 0.00 0.00 4.30
558 559 3.748568 CCTAAGTGAAGTGAAGTTGCCTC 59.251 47.826 0.00 0.00 0.00 4.70
559 560 3.744660 CCTAAGTGAAGTGAAGTTGCCT 58.255 45.455 0.00 0.00 0.00 4.75
560 561 2.226674 GCCTAAGTGAAGTGAAGTTGCC 59.773 50.000 0.00 0.00 0.00 4.52
561 562 3.142174 AGCCTAAGTGAAGTGAAGTTGC 58.858 45.455 0.00 0.00 0.00 4.17
562 563 5.066505 ACAAAGCCTAAGTGAAGTGAAGTTG 59.933 40.000 0.00 0.00 0.00 3.16
563 564 5.193679 ACAAAGCCTAAGTGAAGTGAAGTT 58.806 37.500 0.00 0.00 0.00 2.66
564 565 4.781934 ACAAAGCCTAAGTGAAGTGAAGT 58.218 39.130 0.00 0.00 0.00 3.01
565 566 5.757850 AACAAAGCCTAAGTGAAGTGAAG 57.242 39.130 0.00 0.00 0.00 3.02
566 567 5.163561 CCAAACAAAGCCTAAGTGAAGTGAA 60.164 40.000 0.00 0.00 0.00 3.18
567 568 4.338118 CCAAACAAAGCCTAAGTGAAGTGA 59.662 41.667 0.00 0.00 0.00 3.41
568 569 4.097892 ACCAAACAAAGCCTAAGTGAAGTG 59.902 41.667 0.00 0.00 0.00 3.16
569 570 4.278310 ACCAAACAAAGCCTAAGTGAAGT 58.722 39.130 0.00 0.00 0.00 3.01
570 571 4.918810 ACCAAACAAAGCCTAAGTGAAG 57.081 40.909 0.00 0.00 0.00 3.02
571 572 5.889289 ACTAACCAAACAAAGCCTAAGTGAA 59.111 36.000 0.00 0.00 0.00 3.18
572 573 5.442391 ACTAACCAAACAAAGCCTAAGTGA 58.558 37.500 0.00 0.00 0.00 3.41
573 574 5.278315 GGACTAACCAAACAAAGCCTAAGTG 60.278 44.000 0.00 0.00 38.79 3.16
574 575 4.825634 GGACTAACCAAACAAAGCCTAAGT 59.174 41.667 0.00 0.00 38.79 2.24
575 576 4.217767 GGGACTAACCAAACAAAGCCTAAG 59.782 45.833 0.00 0.00 41.20 2.18
576 577 4.146564 GGGACTAACCAAACAAAGCCTAA 58.853 43.478 0.00 0.00 41.20 2.69
577 578 3.138653 TGGGACTAACCAAACAAAGCCTA 59.861 43.478 0.00 0.00 41.20 3.93
578 579 2.091555 TGGGACTAACCAAACAAAGCCT 60.092 45.455 0.00 0.00 41.20 4.58
579 580 2.312390 TGGGACTAACCAAACAAAGCC 58.688 47.619 0.00 0.00 41.20 4.35
580 581 3.056821 GGATGGGACTAACCAAACAAAGC 60.057 47.826 0.00 0.00 45.13 3.51
581 582 3.509967 GGGATGGGACTAACCAAACAAAG 59.490 47.826 0.00 0.00 45.13 2.77
582 583 3.502356 GGGATGGGACTAACCAAACAAA 58.498 45.455 0.00 0.00 45.13 2.83
583 584 2.225167 GGGGATGGGACTAACCAAACAA 60.225 50.000 0.00 0.00 45.13 2.83
584 585 1.356398 GGGGATGGGACTAACCAAACA 59.644 52.381 0.00 0.00 45.13 2.83
585 586 1.356398 TGGGGATGGGACTAACCAAAC 59.644 52.381 0.00 0.00 45.13 2.93
586 587 1.638589 CTGGGGATGGGACTAACCAAA 59.361 52.381 0.00 0.00 45.13 3.28
587 588 1.203505 TCTGGGGATGGGACTAACCAA 60.204 52.381 0.00 0.00 45.13 3.67
588 589 0.419865 TCTGGGGATGGGACTAACCA 59.580 55.000 0.00 0.00 46.24 3.67
589 590 1.421646 CATCTGGGGATGGGACTAACC 59.578 57.143 0.00 0.00 43.97 2.85
590 591 2.938956 CATCTGGGGATGGGACTAAC 57.061 55.000 0.00 0.00 43.97 2.34
616 617 1.210234 CAAAATCCCTGCAAATCCCCC 59.790 52.381 0.00 0.00 0.00 5.40
617 618 1.210234 CCAAAATCCCTGCAAATCCCC 59.790 52.381 0.00 0.00 0.00 4.81
618 619 1.407299 GCCAAAATCCCTGCAAATCCC 60.407 52.381 0.00 0.00 0.00 3.85
619 620 1.278699 TGCCAAAATCCCTGCAAATCC 59.721 47.619 0.00 0.00 0.00 3.01
620 621 2.766345 TGCCAAAATCCCTGCAAATC 57.234 45.000 0.00 0.00 0.00 2.17
621 622 2.306512 ACATGCCAAAATCCCTGCAAAT 59.693 40.909 0.00 0.00 37.27 2.32
622 623 1.698532 ACATGCCAAAATCCCTGCAAA 59.301 42.857 0.00 0.00 37.27 3.68
623 624 1.350071 ACATGCCAAAATCCCTGCAA 58.650 45.000 0.00 0.00 37.27 4.08
624 625 2.101783 CTACATGCCAAAATCCCTGCA 58.898 47.619 0.00 0.00 38.23 4.41
625 626 2.360165 CTCTACATGCCAAAATCCCTGC 59.640 50.000 0.00 0.00 0.00 4.85
626 627 2.954318 CCTCTACATGCCAAAATCCCTG 59.046 50.000 0.00 0.00 0.00 4.45
627 628 2.852449 TCCTCTACATGCCAAAATCCCT 59.148 45.455 0.00 0.00 0.00 4.20
628 629 3.297134 TCCTCTACATGCCAAAATCCC 57.703 47.619 0.00 0.00 0.00 3.85
629 630 6.959639 TTAATCCTCTACATGCCAAAATCC 57.040 37.500 0.00 0.00 0.00 3.01
630 631 8.084684 GGAATTAATCCTCTACATGCCAAAATC 58.915 37.037 0.00 0.00 45.56 2.17
631 632 7.955918 GGAATTAATCCTCTACATGCCAAAAT 58.044 34.615 0.00 0.00 45.56 1.82
632 633 7.346751 GGAATTAATCCTCTACATGCCAAAA 57.653 36.000 0.00 0.00 45.56 2.44
633 634 6.959639 GGAATTAATCCTCTACATGCCAAA 57.040 37.500 0.00 0.00 45.56 3.28
634 635 5.692781 GGGGAATTAATCCTCTACATGCCAA 60.693 44.000 0.00 0.00 46.27 4.52
635 636 4.202567 GGGGAATTAATCCTCTACATGCCA 60.203 45.833 0.00 0.00 46.27 4.92
636 637 4.336280 GGGGAATTAATCCTCTACATGCC 58.664 47.826 0.00 0.00 46.27 4.40
647 648 3.402708 AGGGGATTGAGGGGGAATTAATC 59.597 47.826 0.00 0.00 0.00 1.75
648 649 3.426933 AGGGGATTGAGGGGGAATTAAT 58.573 45.455 0.00 0.00 0.00 1.40
649 650 2.885119 AGGGGATTGAGGGGGAATTAA 58.115 47.619 0.00 0.00 0.00 1.40
650 651 2.624846 AGGGGATTGAGGGGGAATTA 57.375 50.000 0.00 0.00 0.00 1.40
651 652 1.575788 GAAGGGGATTGAGGGGGAATT 59.424 52.381 0.00 0.00 0.00 2.17
652 653 1.235756 GAAGGGGATTGAGGGGGAAT 58.764 55.000 0.00 0.00 0.00 3.01
653 654 0.178816 TGAAGGGGATTGAGGGGGAA 60.179 55.000 0.00 0.00 0.00 3.97
654 655 0.178816 TTGAAGGGGATTGAGGGGGA 60.179 55.000 0.00 0.00 0.00 4.81
655 656 0.936691 ATTGAAGGGGATTGAGGGGG 59.063 55.000 0.00 0.00 0.00 5.40
656 657 2.670939 GAATTGAAGGGGATTGAGGGG 58.329 52.381 0.00 0.00 0.00 4.79
657 658 2.024080 TGGAATTGAAGGGGATTGAGGG 60.024 50.000 0.00 0.00 0.00 4.30
658 659 3.026694 GTGGAATTGAAGGGGATTGAGG 58.973 50.000 0.00 0.00 0.00 3.86
659 660 3.026694 GGTGGAATTGAAGGGGATTGAG 58.973 50.000 0.00 0.00 0.00 3.02
660 661 2.654385 AGGTGGAATTGAAGGGGATTGA 59.346 45.455 0.00 0.00 0.00 2.57
661 662 3.026694 GAGGTGGAATTGAAGGGGATTG 58.973 50.000 0.00 0.00 0.00 2.67
662 663 2.654385 TGAGGTGGAATTGAAGGGGATT 59.346 45.455 0.00 0.00 0.00 3.01
663 664 2.287584 TGAGGTGGAATTGAAGGGGAT 58.712 47.619 0.00 0.00 0.00 3.85
664 665 1.753903 TGAGGTGGAATTGAAGGGGA 58.246 50.000 0.00 0.00 0.00 4.81
665 666 2.171003 GTTGAGGTGGAATTGAAGGGG 58.829 52.381 0.00 0.00 0.00 4.79
666 667 2.171003 GGTTGAGGTGGAATTGAAGGG 58.829 52.381 0.00 0.00 0.00 3.95
667 668 1.812571 CGGTTGAGGTGGAATTGAAGG 59.187 52.381 0.00 0.00 0.00 3.46
668 669 2.778299 TCGGTTGAGGTGGAATTGAAG 58.222 47.619 0.00 0.00 0.00 3.02
669 670 2.882137 GTTCGGTTGAGGTGGAATTGAA 59.118 45.455 0.00 0.00 0.00 2.69
670 671 2.158740 TGTTCGGTTGAGGTGGAATTGA 60.159 45.455 0.00 0.00 0.00 2.57
671 672 2.226330 TGTTCGGTTGAGGTGGAATTG 58.774 47.619 0.00 0.00 0.00 2.32
672 673 2.649531 TGTTCGGTTGAGGTGGAATT 57.350 45.000 0.00 0.00 0.00 2.17
673 674 2.504367 CTTGTTCGGTTGAGGTGGAAT 58.496 47.619 0.00 0.00 0.00 3.01
674 675 1.961793 CTTGTTCGGTTGAGGTGGAA 58.038 50.000 0.00 0.00 0.00 3.53
675 676 0.534203 GCTTGTTCGGTTGAGGTGGA 60.534 55.000 0.00 0.00 0.00 4.02
676 677 1.515521 GGCTTGTTCGGTTGAGGTGG 61.516 60.000 0.00 0.00 0.00 4.61
677 678 1.515521 GGGCTTGTTCGGTTGAGGTG 61.516 60.000 0.00 0.00 0.00 4.00
678 679 1.228154 GGGCTTGTTCGGTTGAGGT 60.228 57.895 0.00 0.00 0.00 3.85
679 680 0.537371 AAGGGCTTGTTCGGTTGAGG 60.537 55.000 0.00 0.00 0.00 3.86
680 681 2.076863 CTAAGGGCTTGTTCGGTTGAG 58.923 52.381 0.00 0.00 0.00 3.02
681 682 1.271163 CCTAAGGGCTTGTTCGGTTGA 60.271 52.381 0.00 0.00 0.00 3.18
682 683 1.165270 CCTAAGGGCTTGTTCGGTTG 58.835 55.000 0.00 0.00 0.00 3.77
683 684 0.769247 ACCTAAGGGCTTGTTCGGTT 59.231 50.000 0.00 0.00 35.63 4.44
684 685 1.553704 CTACCTAAGGGCTTGTTCGGT 59.446 52.381 0.00 0.00 35.63 4.69
685 686 1.134491 CCTACCTAAGGGCTTGTTCGG 60.134 57.143 0.00 0.00 42.32 4.30
686 687 1.742750 GCCTACCTAAGGGCTTGTTCG 60.743 57.143 0.00 0.00 46.65 3.95
687 688 2.039818 GCCTACCTAAGGGCTTGTTC 57.960 55.000 0.00 0.00 46.65 3.18
694 695 1.700186 GGATCTTGGCCTACCTAAGGG 59.300 57.143 3.32 0.00 46.65 3.95
764 765 4.609301 TGCCATTGCCCTATTTACTTTCT 58.391 39.130 0.00 0.00 36.33 2.52
860 861 1.208165 AGTGGGGAGTTGGATGGACC 61.208 60.000 0.00 0.00 39.54 4.46
865 866 0.693049 GTGTGAGTGGGGAGTTGGAT 59.307 55.000 0.00 0.00 0.00 3.41
872 873 0.689412 TGTGTCTGTGTGAGTGGGGA 60.689 55.000 0.00 0.00 0.00 4.81
892 901 2.243957 CGAGTGCTCGTTGTGCCAA 61.244 57.895 12.87 0.00 46.99 4.52
893 902 2.661537 CGAGTGCTCGTTGTGCCA 60.662 61.111 12.87 0.00 46.99 4.92
912 927 3.309682 TGGAAAGATCACGATTCGCAATC 59.690 43.478 5.86 9.27 34.52 2.67
913 928 3.063997 GTGGAAAGATCACGATTCGCAAT 59.936 43.478 5.86 0.00 0.00 3.56
922 937 1.421485 GCGCAGTGGAAAGATCACG 59.579 57.895 0.30 0.00 39.86 4.35
947 962 3.560481 CAGATTGGTGATGACTGATGAGC 59.440 47.826 0.00 0.00 0.00 4.26
949 964 3.538591 GCAGATTGGTGATGACTGATGA 58.461 45.455 0.00 0.00 0.00 2.92
950 965 2.617308 GGCAGATTGGTGATGACTGATG 59.383 50.000 0.00 0.00 0.00 3.07
951 966 2.422519 GGGCAGATTGGTGATGACTGAT 60.423 50.000 0.00 0.00 0.00 2.90
952 967 1.065199 GGGCAGATTGGTGATGACTGA 60.065 52.381 0.00 0.00 0.00 3.41
953 968 1.386533 GGGCAGATTGGTGATGACTG 58.613 55.000 0.00 0.00 0.00 3.51
954 969 0.107508 CGGGCAGATTGGTGATGACT 60.108 55.000 0.00 0.00 0.00 3.41
955 970 1.718757 GCGGGCAGATTGGTGATGAC 61.719 60.000 0.00 0.00 0.00 3.06
992 1012 4.066139 AGTTCCCCATGGCCTGGC 62.066 66.667 11.05 11.05 44.46 4.85
993 1013 2.043652 CAGTTCCCCATGGCCTGG 60.044 66.667 6.09 9.37 45.51 4.45
994 1014 2.757099 GCAGTTCCCCATGGCCTG 60.757 66.667 6.09 10.09 34.94 4.85
995 1015 4.066139 GGCAGTTCCCCATGGCCT 62.066 66.667 6.09 0.00 41.39 5.19
1056 1076 1.066587 CTTGAGGATCTCGCCGTCC 59.933 63.158 0.00 0.00 34.92 4.79
1329 1352 1.264045 TGTCATCCATGGAGACGGCA 61.264 55.000 25.94 19.71 35.09 5.69
1344 1367 1.379916 CAAGAGGGCCACCATGTCA 59.620 57.895 6.18 0.00 40.13 3.58
1360 1383 2.646175 CCTCCGACCCTCTTCGCAA 61.646 63.158 0.00 0.00 37.70 4.85
1383 1406 0.182775 AACCAACGTCCTCCTGCTTT 59.817 50.000 0.00 0.00 0.00 3.51
1398 1421 2.066340 CCACCCTCTGTAGCAACCA 58.934 57.895 0.00 0.00 0.00 3.67
1599 1642 4.569966 CCATCTCAAAACTACTAGCAGCAG 59.430 45.833 0.00 0.00 0.00 4.24
1601 1644 3.873952 CCCATCTCAAAACTACTAGCAGC 59.126 47.826 0.00 0.00 0.00 5.25
1621 1664 2.576648 AGACAACCTGAAGATAACCCCC 59.423 50.000 0.00 0.00 0.00 5.40
1647 1690 2.983879 GCACCCAGCACCCACCTAT 61.984 63.158 0.00 0.00 44.79 2.57
1648 1691 3.646715 GCACCCAGCACCCACCTA 61.647 66.667 0.00 0.00 44.79 3.08
1658 1701 2.353357 ACATGGATGTATGCACCCAG 57.647 50.000 2.35 0.00 39.68 4.45
1705 1748 6.055231 TCAAGTTTGTATTGTCTCGTTTGG 57.945 37.500 0.00 0.00 0.00 3.28
1769 1822 8.578308 TGAGTGCTTGTGAAATAATGAAAAAG 57.422 30.769 0.00 0.00 0.00 2.27
1790 1845 3.069158 GTGGTACTGTGGTGTAGTTGAGT 59.931 47.826 0.00 0.00 0.00 3.41
1809 1864 3.951680 GGTCCAATTAATACCTGGTGTGG 59.048 47.826 10.23 7.29 0.00 4.17
1830 1885 0.674581 TGAGCAGCGGAGTCATTTGG 60.675 55.000 0.00 0.00 0.00 3.28
1857 1912 4.585955 TCCAGAGCCGAAATCATAGTAC 57.414 45.455 0.00 0.00 0.00 2.73
1858 1913 5.808366 ATTCCAGAGCCGAAATCATAGTA 57.192 39.130 0.00 0.00 0.00 1.82
1934 1993 1.135141 AGAGATGTCTTGCAGAGTCGC 60.135 52.381 0.00 0.77 0.00 5.19
1994 2053 4.618920 TTCCTTCAAGTAGGTCCAGAAC 57.381 45.455 0.00 0.00 36.63 3.01
2020 2079 5.811399 AGAATTCGGTGATTGCGAATTTA 57.189 34.783 4.20 0.00 40.82 1.40
2021 2080 4.701956 AGAATTCGGTGATTGCGAATTT 57.298 36.364 4.20 0.00 40.82 1.82
2027 2086 6.412072 CGAAAATCTTAGAATTCGGTGATTGC 59.588 38.462 19.11 13.26 40.55 3.56
2028 2087 7.684670 TCGAAAATCTTAGAATTCGGTGATTG 58.315 34.615 23.38 9.66 43.46 2.67
2055 2120 6.140303 ACTTAAGTCTGGCAATGCATATTG 57.860 37.500 7.79 0.00 45.17 1.90
2079 2144 4.521146 AGATCACACAAGAGCCTTTATGG 58.479 43.478 0.00 0.00 39.35 2.74
2141 2231 3.927481 GAGGGGACACTGGCAAGGC 62.927 68.421 0.00 0.00 0.00 4.35
2148 2238 1.372683 CACAGGTGAGGGGACACTG 59.627 63.158 0.00 0.00 40.22 3.66
2174 2264 0.536233 TGATGACCGGTTGTGGTTGG 60.536 55.000 9.42 0.00 44.01 3.77
2176 2266 0.250727 CCTGATGACCGGTTGTGGTT 60.251 55.000 9.42 0.00 44.01 3.67
2181 2271 0.742281 CTCTGCCTGATGACCGGTTG 60.742 60.000 9.42 0.00 0.00 3.77
2183 2273 0.904865 TTCTCTGCCTGATGACCGGT 60.905 55.000 6.92 6.92 0.00 5.28
2285 2377 7.613551 AATAGTAGTTCACCGAGGGAATTAT 57.386 36.000 0.00 0.00 0.00 1.28
2349 2447 6.262049 GGTGGCCAACAGAAACAAATTATTTT 59.738 34.615 18.33 0.00 0.00 1.82
2420 2518 2.382882 TGGCTTGTGTGTCCATTTCAA 58.617 42.857 0.00 0.00 0.00 2.69
2436 2540 3.297134 TTTCCTCTGTTCTTGTTGGCT 57.703 42.857 0.00 0.00 0.00 4.75
2455 2559 1.720694 CCGGCGTGTGTCCTGTTTTT 61.721 55.000 6.01 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.