>input_sequence_78980
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-----------------------------------------------------------ATGGGGAACTGCCTGGTGATC
CAGGACAGAAGGGAGATCAAGGTGATGAGCGTCGTGGACGGCGAGATCCTCAAGCCGCTCCCGGCGCCACCCCTCTCCAA
GGGCGCCCTCGCACGCGTCTCCGGCTCCTCCGACGCCGACGACGCGCTCCGGCCGCAGAAGCAAGGCCTC---GACGCCC
GGGCGGGCGGCATGGCGCAGCTGCACCGCCTGTTCGCCTCCGACGCCAAGGCGCCTACCGCCGCGGCGGCTGACCCGGAG
GGCGCCGTCGTGAGGGTGAAGCTGGTCATCAGCAAGCAGGAGCTGAGGAGGATGCTGGGCAAGGACGACGATGCCGTCTC
CATGGATGACATGGTGGCCCTCTTGCGAAGAGGGTCGGAGGATCAAAAGCAGGAGGACGTTGGTTGCTACAGAGGGTGGC
GGCCTGCCTTGCATAGCATACCTGAAGGCAGCGGTGATCTATATTCTATGTTAGCATAA---------------------
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>chr6B_1_TraesCS6B01G059200
TCAATGTCTTTAATTCCTTCTTCCTTAGTTTTTTTTTTCAAAATTACTCATTATGTTTCATAATAATTGAAGTTGTAGGT
TTGTCCTAAGTCAAACTTGCTCAATTGACCAACTCTATGAAAAAATGTGATAACATTTGCAACATCAAATACACATAGTA
TGATAATATGTTTCATAAAGAATCTCAAGATACTATTTGGTGTTCTAGATGTTAATATATTCTTCTAGTGACTTCGTCAA
ACTTGAACAAGTATGACTTGAGACGAATTCAGTACTTCAATTATTTTAAAACGGAGGTACTAGAGGTCCCAGCGAAACAA
CGCGCTCCCTCTGTATCAAAATGTTAGACGTTTCAGAGGAAGTAGTACTTAATTTATGTTTTTCTTTAGTGAGGAAAAAA
ATATACGTACAACAGATAATGTTGTCTTTCCTCCTCCTCAAGGAAAGCCTTCGCTCACAAAAAAAATTGATAATGCAAAT
TCATTCACCTAATTAACCAGTAGAGGTCCCAACGAAACAGCACTCGCTCGTGTAATGACTATAGCGTGCTGTCCCAAGGA
GGCAACTTCACTTCACTTAGGCTTTGTTTGGTTAGTCCCATCCCCAGATGGATTGGGGGGGATTTGCAGGGATTTTGGCA
TGTAGAGGATTAATTCCCCCTCAATCCCCTTCAATTCCACCTCAACCGAACAAGCCCTTAGGTAGGCCAAGATCCAAGGT
CGCTTTCAAAAAGGAAAAGAAAAAGATAATTTGAGTCACAAAAAAGAAAGTAAATAGGGCAATGGCAGTAGTGAAATAAG
CCCTTAAATATTTGGACATTTCCCTACCCTCAGTTCTTTAAATAGACCACTCCACTGGTCGGTCCATCCAACTCCCCACT
CACACA--------GACACATT----GG--CACAACGAGCACTCGCGATTGCGAATCGTGATCTTTCCACTGCGCGTGCT
TGCTCATCAG-----TCATCACCAATCTGCCCGCAGTTCAGCTCACCGCCGGCCAGGCCATGGGGAACTGCCTGGTGATC
CAGGACAGAAGGGAGATCAAGGTGATGAGCGTCGTGGACGGCGAGATCCTCAAGCCGCTCCCGGCGCCACCCCTCTCCAA
GGGCGCCCTCGCACGCGTCTCCGGCTCCTCCGACGCCGACGACGCGCTCCGGCCGCAGAAGCAAGGCCTC---GACGCCC
GGGCGGGCGGCATGGCGCAGCTGCACCGCCTGTTCGCCTCCGACGCCAAGGCGCCTACCGCCGCGGCGGCTGACCCGGAG
GGCGCCGTCGTGAGGGTGAAGCTGGTCATCAGCAAGCAGGAGCTGAGGAGGATGCTGGGCAAGGACGACGATGCCGTCTC
CATGGATGACATGGTGGCCCTCTTGCGAAGAGGGTCGGAGGATCAAAAGCAGGAGGACGTTGGTTGCTACAGAGGGTGGC
GGCCTGCCTTGCATAGCATACCTGAAGGCAGCGGTGATCTATATTCTATGTTAGCATAAGAAATTAGCTGGA--------
-----------AGAAAATACATATATGGATACTAAGCATAAGAAAATATGCATGTGTATATGTATATGTATATGTATTTG
TATTCACATA-GTAGAAAATAGAGATCATAGTTGGGTAGATCTGCTGCTAGTAGTTTTGAGATGGGGGTTATCTTCAGGT
TGTCTTGTTATAGGTGGGTGCTGGGTGCATACATCCATGTAAGACAAGGTAAAGATAGTCCTGGAAACCAAACGAGACAA
TACAAACTTGATTATTGATGGCATATACTTGTTGT----------TACTAAGCTTACTTTTCTTTT--TCATTATTTCAC
AAGCACTCAACTACACCACAGTACCACACCAGGTATTAATTGGACCAAATGACTCCGCTGCTCAAGGTACTGTACTATGA
TTTCGGCTCTGGAATTCCTTCTTAT----TTCCCAGTAGGACACACTCCTAGCCTGGCTTCAAAGATGAATAGCGACTCT
GCAAGACATCTCTGCCTGCCATAATTAAGCAAGCAGAAGATTCAGTCAATGAGTTCTGGACCTACTTGAAGGAAATCGTA
AATTCGCAATCACCGAATTCTAAGA------TTTTCGAGCAATATGCATTGCCAGACTTAAGTCCATAAAGGCTCTTGTG
TGATCTCCTTAGA-----------------------GCTTCCACAACATTA--TTTTTTACAGGGAAGTAGCCTTGCCAG
TGTCCCCTCACCTGTGCCGCCAACCAACCACAACCGGTCATCAGGCAGAGAATAGTGGCAGTCG-CCAAGTAGCCCTGCT
GTC-AATTTGAGATGGAAAAAAGTTCTTCAGTATTTATATTCTCATGTCAAAAAAAATAA-TTCCCTCGGTGAACTACTA
TTA----GCACTGCCATGCTGCCACTT-TTTTTGGTTGGATTTAGTAAAATAATTTGTTTCTGTTGGCCACCTCTTTTGT
TGTCTTCACCGGTTTTGGTGGATCCACTACGCGCTCGTTGAAATGG------ACACACAAGCCAACAAGAACAGAGGAAA
AAACAGGACACACGCCGGCT
>chr6A_697
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--------------------------------------------------------CTTGGGTAGGCCACGATCCAAGGT
CGCTTTCACAAGGGAAAAAAAAAAGAGAATT--TGTCACAAAAATGGAAGTAAATAGTGCAATGGCATTAGTGAAATAAG
CTCTCAAATATTTGGACATT-CTCTGCTATCAATTCTTTAAATAGGCCACTCCACTGGTCCGTCCGTCCAACCCCCCACT
TACATA--------GCCACAACCCACAACCCACAACGAGCAC------TTGCGAATTGTGATCTTCCCACTGCGCGTGCT
TCCCTCGATCGTAGCTCATCACCAATCTGCCCGCAGCTCAGCTCATCGCC-----GGCCATGGGGAACTGCCTGGTGATC
CAGGACAGAAGGGAGATCAAGGTGATGAGCGTGGTCGACGGCGAAGTCCTCAAGCCGCTCCCGGCGCCACCCCTCTCCAA
GGGCGCCCTCGCACGCGTCTCCGGCTCCTCCGACGCCGACGACGCGCTCCGGCCGCAGAAGCAAGGCCTC---GACGGCC
GGGCGGGCGGCATGGGGCAGCTGCACCGCCTGTTCCCCTCCGACGCCAAGGCGCCTCCTGCCGCCGCGGCTGACCCGGAG
GGCGCCGTCGTGAGGGTGAAGCTGGTCATCAGCAAGCAGGAGCTGAGGAGGATGCTGGGCAAGGACGACGAGGCCGTCTC
CATGGACGACATGGTGGCTCTCCTGCGAGGAGGGCCGGAGGACCGGAAGCAGGAGGACGTCGGTTGCTACAGAGGGTGGC
GGCCTGCCTTGCATAGCATACCTGAAGGCAGCGGTGATCTATATTCCATATTAGCATAAGAAATTAGCTGGA--------
-----------AGAAAATACATATATGGATACTAAGCATAAGAAAATATGCATGTGTTTATATTCACA------------
------------TAGAAAATAGAGATCATAGTTGGGTAGATTTTCTGCTAGTAGTTTTGGGATAGGGGTTATCTTCAGGT
TGTCTTGTT---------CGGTGGGTGCATATA-CCATGCAAGACAAGTTAAAGATAGTCCTGGAAATCAAACGAGACAA
TATAAACTTAATTATTGATGGCATATACTGATATACTCGTTGCTGTACTAAGCTTACTCTTTTTTTCTTCATTATTTCAC
AAGCTCTGAAGTACACCACAGTAGCACGCCAGGTATTAACTGGATTGAATGACTCCGCTGCTCAAGGC-----ACTATGA
TTTCGGCTCTGGAATAGGAGTACCTTCTATTCTCAATAGGACACACTCCTAGCCTGGCTTCAAAGATGAGTAACGACTCT
GCAAGACATCTCTGCCCGCCATAATTAAGCACGCAGAAGATTCAGTCAATGAATTCTGGACCTACTTGAAGGAAATCGCG
ATAACCGAT-------------------GATTTATCAAGTAATATG----------------------------------
TGATCTTCTTGGAGGACCGCCTCCGCCGAAGCAATCGCTCCCACAACATCA--TTTTTTACAGGGAAGCAACCATGCTAG
TGTCCCCTCACCTGTGCCGCCAATCGG-CATAGCCGGTTATCAGACAGAGAGTAGTGGCAGTCGACCAAGTAGCCCCGCT
GTC-AATTTGAGAGGGAAAAAAGTTCTTCAGTATTTATATCCTCATGTCAACAAAATTAATTTCCCTCAGTGAACTACCA
TTAGCATGCACTACCATGCTGCCACTT-TTTT-GGTTGGATTTAGTGAAATAATTTGTTTCTGTTGGCCACCTCTTTTGT
TGTCTCGACAGGTTTTAGTGGATTCAAA--GCGCTCGATGAAATGGACTCA-ACACACAGGCGAACAAGAACAGAGGA--
--------------------
>chr6D_697
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--------------------------------------------------------CTTAGGTAGGCCAAGATCCAATGT
CGCTTTCAAGAAGGG---AAAAAAGATAATTTGTGTCACAAAAATGAAAGTAAATAGGGCAATGGCAGTAGTGAAATAGG
CCCTTAAATATCTGGACAT-TCCCTACCCTCAGTTCTTTAAATAGACCACCCCACTGGTCCGTCCGTCCAACCCCCCACT
CACACA--------GACACAGACACGGG--CACAACGAGCAC------TTGCGAATTGTAATCTTTCCATTGCGCGTGCT
TCCC----TCCTAGCTCACCACCAATCTGCCCGCAGCTCAGCTCACCGCC-----GGCCATGGGGAACTGCCTGGTGATC
CAGGACAGAAGGGAGATCAAGGTGATGAGCGTCGTCGACGGCGAAATCCTCAAGGCGCTCCCGGTGCCATCCCCCTCCAA
GGGCGCCCTCGCACCCGTCTCCGACTCCTCCGACGCCGAAGACGCGCTCCGGCCGCAGAAGCAAGGCCTC---GACGGCC
GGGCGGGCGGCATGGGGCAGCTGCACCTCCTGTTCCCCTCCGATGCTAACGCGCCTTCTGCCGCGGCGGCTGACCCGGAG
GGCGCCGTCGTGAGGGTGAAGCTGGTCATCAGCAAGCAGGAGCTCAGGAGGATGCTGGGCAAGGACGACGAGGCCGTCTC
CCTGGACGACATGGTGGCTCTCCTGCGAGGAGGGCCGGAGCATCAGAAGCAGGAGGACGTCGGTTGCTACCGAGGGTGGC
GGCCTGCCTTGCATAGCATACCTGAAGGCAGCGGTGATCTATATTCCATGTTAGCATA-GAAATTAGCTGGA--------
-----------AGAAAATACATATATGGATACTAAGCATAAGAAAATATGCATGTGTATATGTAT--------GTATTTA
TATTCACATACGTAGAAAATAGAGATCATAGTTGGGTAGAT---CTGCTAGTAGTTTTGAGATAGGGGTTATCTTCAGGT
TGTCTTGTT---------TGGTGGGTGCATA---CCATGTAAGACAAGTTAAAGATAGTCCTGGAAATCAAACGGGACAA
TATAAACCTAATTATTGATGGCATATACTCGTTGT----------TACTAAGCTTACTTT--TTTT--TCATTATTTCAC
AAGCTCTCAACTACACCATAGTAACACACCAGATATTAATTGGATCAAATGACTCCGCTGCTCAAGATACTA---TACGA
TTTTGGCTCTGGCT----------------------------------------TGGCTTCAAAGATGAAAAATGACTCT
GCAAGACATCTCTGCCTGCCATAATTAAGCAAGCAGAAGATTCGGTCAATGAATTCTGGACCTACTTGAAGGAAATCGCG
AATTCTTGATCACCGAATTCTTTCCTAAGATTTATCAAGTAATATGCATTGCCAGACTTAAGTGCATAAAGGCTCTTGTG
TGATCTCCTTGGAGGACAGCCTCCGCCGAAGCAA-CGCTCCCACAACATCAGTTTTTTTACAGGGAAGTAACCTTGCTAG
GGTCCCCTCACCTGTGCCGCCGATCGACCATAGCCAGTCATCAGGCAGAG--TAGTGGCAGTCG-CCAAGTAGCCCTGCT
GTCAAATTTGAGAGGGAAAAAAGTTCTTCAGTATTTATATTCTCATGTCAACAAAATCATTTTCCCTCGGTGAACTACTA
TTA----GCACTGCCATGCTGCCACTAATTTT-TGTTGGATTTAGTGAAGTAATTTGTTTCTGTTGGCCACCTCTTTTGT
TGTCTTCACCGGTTTGGGTGGATTCAACACGAGCTCGATGAAATGCACTCATACACACAGGCCAACAAGAACAGAGGATA
AAACAGG-------------
>chr5A_697
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--------------------------------------------------------CTTAGGTAGGCCAAAGTCTAAGGC
CGCTTTACTAAAAGG---CAGAAATAGAATT--TGTCACAAAAATGAAAGTGAGTAGAGCAATGGCATTCGTGAAATAAG
CTCTTAAATATTTGGACATT-CTCTACCATCACTTCTTTAAATAGAGCACTCCACTGGTCCGTGC----AACCCCCCACT
TACACAGACAGACACACTGGCAC-----------AGGAGCAC------TTGCGAACTGTGATCTTTCCATTGCGCGTGCT
TCCC----TCGTAGCTCACCACCAATCTGCTCGCAGCCCAGCTCATCGTC-----GGCCATGGGGAACTGCCTGGTGATC
CAAGACAGAAAGGAGATCAAGGTGATGAGCGTCGGCGATGGCGAGATCCTCAAGGCGCTCC---CGCCACCCCTCTCTAA
GGGCGCCGTCGCACGGGTCTCTGG---CTCCGACACCGATGACGCGCTCCGGGCGCAGAAGCAACACCTC---GACGTCC
GGGTGGGCGACTTGGGGCAGCTGCATCGTTTGTTCCCCTCCGACGTGAAGGCACCTTCCGCTGTCGCTGACCCT------
GGAGCCGTCATGAGGGTGAAGCTGGTCATCAGCAAGCAGGAGCTCAGGCGGATGCTGGGCAAGGACGACCAGGCCGTCTC
CCTGGACGACATGGTGGCTCTCATGCGAAGAGGATCGGAAGATCAGCACCAGGAGGAGATCGGTTGCTGCAGAGGGTGGC
GGCCTGCCTTGCACAGCATACCTGAAGGAAGCGGTGATTTAT----TCTATTAGCAGAAGA-ATTAACTGGCGATTTTGG
GAGCTTGCTGGAGAAAATGCATAT-TGGATAATAAGCATAAGAAAATATGCATGTGTGTATGTATATATTTA------TA
TATTCACATA-G--GAAAACAGAGATCATAG-----TAGAT---TTGCTAGTAGTTTTGAGATAGGGGTTATCTTCAGGT
TGTCTTGTT---------AGGTAGGTGCATGCATC----CATGACAAGGTGAAGATAGTCTTGGAAATCAAACGAGACAG
TATAAACTTAATTATTGATGGCATATACTCGTTGT----------TAATAAGCTTTTTTTTTCC-----CATTATTTCAC
A-------------------------------------------------------------------------------
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>chr5B_700
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-----------------------------------------------------------AGGTAGGCCAAGGTCCAAGGC
CGCTTTATTAAAAGG---CAGAAAGAGAATT--TGTCACAAAAATGAAAGTAAGTAGAGAAATGGCATTCGTGAAATAAG
ATCTTAAATATTTGGACATT-CTCAACCATCACTTCTTTAAATAGAGCACTCCACTGGTCCGTCC----AACCCCCCACT
TACACA--------CACTGGCAC-----------ACGAGCAC------TTGCGAATTGTGATCTTTCCACTGCGCGTGCG
TCCC----TCGTAGCTCACCACCAATCTGCTCGCAGCTCAGCTCATCGTC-----GGCCATGGGGAACTGCCTGGTGATC
CAAGACAGAAAGGAGATCAAGGTGATGAGCGTCGTCGACGGCGAGATCCTCAAGGTGCTCC---CGCCACCCCTCTCTAA
GGGCGCCCCGGCACGCGTCTCCGG---CTCAGACCCCGACGACGAGCTCCGGGCGCAGAAGCAACACCTCAACGACGTCC
AGGTGGGCGACTTGGGGCAGCTGCATCGTTTGTTCCCCTCCGACATGAAGGCGCCTTCCGCCGCCGCTGACCCT------
GGCGCCGTCATGAGGGTGAAGCTGGTCATCAGCAAGCAGGAGCTCAGGCGGATGCTGGGCAAGGACGACCAGGCCGTCTC
CCTGGACGACATGGTGGCTCTCATGCGAAGGGGATCGGAAGATCAGCAGCAGGAGGAGATCGGTTGCTGCAGAGGGTGGC
GGCCTGCCTTGCACAGCATACCTGAAGGCAGCGGTGATTTAT----TCTATTAGCAGAAGATATTAACTGGCGATTTTGG
GAGCTTGCTGGAGAAAATGCAAAT-TGGATAATAAGCAGAAGAAAATATGCATGTGTGTATGTATATATTTA------TA
TATTCACATA-G--GAAAACAGAGATCATAGTTGGCTAGAT---TTGCTAGTAGTTTTGAGATAGGGGTTATCTTCAGGT
TGTCTTGTT---------AGGTAGGTGCATGCATCCATGTAAGACAAGGTGAAGATAGTCTTGGAAATCAAACGAGACAA
TATAAACTTAATTATTGATGGCATATAATCGTTGT----------TAATAAGCTTTTTTTC-------------------
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------
------------------S--------------S----------S-----------------------------------
------------------------------------------------------------S----S------S-------
--------------------SS--------------------SSSSSS--------S-----------------------
-S-SSSSSSS--------------------------S-------------SSSSS-------------------------
-----------------------------------S--------------------------------------------
-----------------------------------------------------------------------------S--
---------------S-------------------S--------------------S-----------------------
-----------------------------------------------------------------------S--------
------S-----------S---S----------------------S--------------S-------------------
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-------------------------------------------------------------------S-S--S------S
-----------------------------------------S-S-------------------S----------------
---------SSSSSSSSS--S----------------------------------------------S------------
--S------S-------------------S-------------------------------S------------------
----S------------------S--------------------S--------------------------SS-------
---------------SSSSSSSSS--------S--S------------------------------------S-------
----------------------------------------------------S-------------------------SS
-----SS--------------SSSS--------S--S--S-----------------------S----------------
----------S----------------------------S---------S--------------------S------S--
-----------------------S-S----S-S------------------S----------------------------
-------------S-------------------------------------S----S-----------------------
--------------------------------S-------------S---------------------------------
-----------------------S--SS---------S---------------------S------------------S-
-------SSSSSSSSSSSSS
>forward_314
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------------------------------------------------------AGGTACTAGAGGTCCCAGCG------
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>reverse_1406
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---------------------------------------------AAAGCAGGAGGACGTTGGTT---------------
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>forward_315
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-------------------------------------------------------GGTACTAGAGGTCCCAGCGA-----
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>reverse_2266
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-------------------------AACCACAACCGGTCATCAGG-----------------------------------
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