Multiple sequence alignment - TraesCS6B01G055300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6B01G055300 chr6B 100.000 2411 0 0 1 2411 35628124 35630534 0.000000e+00 4453
1 TraesCS6B01G055300 chr6B 91.735 1101 57 16 737 1821 35819109 35818027 0.000000e+00 1498
2 TraesCS6B01G055300 chr6B 94.639 429 18 4 992 1418 101325612 101325187 0.000000e+00 660
3 TraesCS6B01G055300 chr6D 84.317 1135 110 42 720 1805 20813964 20812849 0.000000e+00 1048
4 TraesCS6B01G055300 chr6D 91.643 694 41 9 729 1413 20780342 20781027 0.000000e+00 944
5 TraesCS6B01G055300 chr6D 86.722 723 65 11 156 867 20834081 20833379 0.000000e+00 774
6 TraesCS6B01G055300 chr6D 90.689 537 32 8 894 1420 20818758 20818230 0.000000e+00 699
7 TraesCS6B01G055300 chr6D 84.940 166 19 5 1926 2090 20812766 20812606 1.920000e-36 163
8 TraesCS6B01G055300 chr6D 80.263 152 28 2 720 869 20834230 20834079 1.960000e-21 113
9 TraesCS6B01G055300 chrUn 94.725 436 19 2 976 1411 69444473 69444042 0.000000e+00 675
10 TraesCS6B01G055300 chrUn 95.498 422 16 1 992 1413 69362342 69362760 0.000000e+00 671
11 TraesCS6B01G055300 chr3D 94.676 432 23 0 978 1409 36822404 36822835 0.000000e+00 671
12 TraesCS6B01G055300 chr3D 95.238 420 20 0 990 1409 50658457 50658038 0.000000e+00 665
13 TraesCS6B01G055300 chr3B 95.249 421 17 1 990 1410 80658928 80658511 0.000000e+00 664
14 TraesCS6B01G055300 chr6A 90.761 184 17 0 731 914 20870876 20871059 1.850000e-61 246
15 TraesCS6B01G055300 chr6A 88.024 167 18 2 2113 2278 21077517 21077352 1.890000e-46 196


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6B01G055300 chr6B 35628124 35630534 2410 False 4453.0 4453 100.0000 1 2411 1 chr6B.!!$F1 2410
1 TraesCS6B01G055300 chr6B 35818027 35819109 1082 True 1498.0 1498 91.7350 737 1821 1 chr6B.!!$R1 1084
2 TraesCS6B01G055300 chr6D 20780342 20781027 685 False 944.0 944 91.6430 729 1413 1 chr6D.!!$F1 684
3 TraesCS6B01G055300 chr6D 20818230 20818758 528 True 699.0 699 90.6890 894 1420 1 chr6D.!!$R1 526
4 TraesCS6B01G055300 chr6D 20812606 20813964 1358 True 605.5 1048 84.6285 720 2090 2 chr6D.!!$R2 1370
5 TraesCS6B01G055300 chr6D 20833379 20834230 851 True 443.5 774 83.4925 156 869 2 chr6D.!!$R3 713

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
52 53 0.033781 TCCGGTGTGGTAGAAAACGG 59.966 55.0 0.0 0.0 41.06 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1887 1981 0.251608 TTTACCCCAAGAAGCTGCCC 60.252 55.0 0.0 0.0 0.0 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 1.144716 GCGGATGCAGATGAGGACA 59.855 57.895 0.00 0.00 42.15 4.02
19 20 1.156645 GCGGATGCAGATGAGGACAC 61.157 60.000 0.00 0.00 42.15 3.67
20 21 0.531532 CGGATGCAGATGAGGACACC 60.532 60.000 0.00 0.00 0.00 4.16
21 22 0.179034 GGATGCAGATGAGGACACCC 60.179 60.000 0.00 0.00 0.00 4.61
22 23 0.543277 GATGCAGATGAGGACACCCA 59.457 55.000 0.00 0.00 33.88 4.51
23 24 1.142465 GATGCAGATGAGGACACCCAT 59.858 52.381 0.00 0.00 33.88 4.00
24 25 0.543277 TGCAGATGAGGACACCCATC 59.457 55.000 0.00 0.00 39.44 3.51
27 28 0.835941 AGATGAGGACACCCATCTGC 59.164 55.000 15.51 0.00 45.41 4.26
28 29 0.531532 GATGAGGACACCCATCTGCG 60.532 60.000 0.00 0.00 36.97 5.18
29 30 0.977627 ATGAGGACACCCATCTGCGA 60.978 55.000 0.00 0.00 33.88 5.10
31 32 0.531532 GAGGACACCCATCTGCGATG 60.532 60.000 10.40 10.40 33.88 3.84
32 33 1.221840 GGACACCCATCTGCGATGT 59.778 57.895 14.50 1.46 0.00 3.06
33 34 0.392998 GGACACCCATCTGCGATGTT 60.393 55.000 14.50 2.47 0.00 2.71
35 36 0.392998 ACACCCATCTGCGATGTTCC 60.393 55.000 14.50 0.00 0.00 3.62
36 37 1.153369 ACCCATCTGCGATGTTCCG 60.153 57.895 14.50 0.00 0.00 4.30
37 38 1.889105 CCCATCTGCGATGTTCCGG 60.889 63.158 14.50 0.00 0.00 5.14
38 39 1.153369 CCATCTGCGATGTTCCGGT 60.153 57.895 0.00 0.00 0.00 5.28
39 40 1.431488 CCATCTGCGATGTTCCGGTG 61.431 60.000 0.00 0.00 0.00 4.94
40 41 0.740868 CATCTGCGATGTTCCGGTGT 60.741 55.000 0.00 0.00 0.00 4.16
41 42 0.740868 ATCTGCGATGTTCCGGTGTG 60.741 55.000 0.00 0.00 0.00 3.82
43 44 2.358247 GCGATGTTCCGGTGTGGT 60.358 61.111 0.00 0.00 39.52 4.16
44 45 1.079681 GCGATGTTCCGGTGTGGTA 60.080 57.895 0.00 0.00 39.52 3.25
45 46 1.082117 GCGATGTTCCGGTGTGGTAG 61.082 60.000 0.00 0.00 39.52 3.18
48 49 2.610976 CGATGTTCCGGTGTGGTAGAAA 60.611 50.000 0.00 0.00 39.52 2.52
49 50 3.404899 GATGTTCCGGTGTGGTAGAAAA 58.595 45.455 0.00 0.00 39.52 2.29
50 51 2.563702 TGTTCCGGTGTGGTAGAAAAC 58.436 47.619 0.00 0.00 39.52 2.43
51 52 1.528161 GTTCCGGTGTGGTAGAAAACG 59.472 52.381 0.00 0.00 39.52 3.60
52 53 0.033781 TCCGGTGTGGTAGAAAACGG 59.966 55.000 0.00 0.00 41.06 4.44
53 54 1.571215 CCGGTGTGGTAGAAAACGGC 61.571 60.000 0.00 0.00 33.01 5.68
54 55 1.864176 GGTGTGGTAGAAAACGGCG 59.136 57.895 4.80 4.80 0.00 6.46
55 56 0.600782 GGTGTGGTAGAAAACGGCGA 60.601 55.000 16.62 0.00 0.00 5.54
56 57 1.219646 GTGTGGTAGAAAACGGCGAA 58.780 50.000 16.62 0.00 0.00 4.70
57 58 1.598601 GTGTGGTAGAAAACGGCGAAA 59.401 47.619 16.62 0.00 0.00 3.46
58 59 1.598601 TGTGGTAGAAAACGGCGAAAC 59.401 47.619 16.62 1.68 0.00 2.78
59 60 0.860533 TGGTAGAAAACGGCGAAACG 59.139 50.000 16.62 0.00 40.31 3.60
60 61 1.139163 GGTAGAAAACGGCGAAACGA 58.861 50.000 16.62 0.00 37.61 3.85
61 62 1.136529 GGTAGAAAACGGCGAAACGAC 60.137 52.381 16.62 8.21 37.61 4.34
63 64 0.531311 AGAAAACGGCGAAACGACCT 60.531 50.000 16.62 0.00 37.61 3.85
64 65 0.383860 GAAAACGGCGAAACGACCTG 60.384 55.000 16.62 0.00 37.61 4.00
65 66 2.383027 AAAACGGCGAAACGACCTGC 62.383 55.000 16.62 0.00 37.61 4.85
70 71 3.777925 CGAAACGACCTGCCGCAG 61.778 66.667 13.82 13.82 0.00 5.18
85 86 3.857854 CAGGCAGTCATCGCGCAC 61.858 66.667 8.75 0.00 0.00 5.34
86 87 4.074526 AGGCAGTCATCGCGCACT 62.075 61.111 8.75 0.00 0.00 4.40
87 88 3.121030 GGCAGTCATCGCGCACTT 61.121 61.111 8.75 0.00 0.00 3.16
89 90 1.358725 GGCAGTCATCGCGCACTTTA 61.359 55.000 8.75 0.00 0.00 1.85
90 91 0.652592 GCAGTCATCGCGCACTTTAT 59.347 50.000 8.75 0.00 0.00 1.40
94 95 1.004927 GTCATCGCGCACTTTATGACC 60.005 52.381 19.90 7.29 41.42 4.02
95 96 0.043053 CATCGCGCACTTTATGACCG 60.043 55.000 8.75 0.00 0.00 4.79
98 99 2.395360 GCGCACTTTATGACCGCCA 61.395 57.895 0.30 0.00 38.84 5.69
100 101 0.732571 CGCACTTTATGACCGCCAAT 59.267 50.000 0.00 0.00 0.00 3.16
101 102 1.531677 CGCACTTTATGACCGCCAATG 60.532 52.381 0.00 0.00 0.00 2.82
102 103 1.202290 GCACTTTATGACCGCCAATGG 60.202 52.381 0.00 0.00 0.00 3.16
104 105 3.275143 CACTTTATGACCGCCAATGGTA 58.725 45.455 0.00 0.00 44.01 3.25
105 106 3.692101 CACTTTATGACCGCCAATGGTAA 59.308 43.478 0.00 0.00 44.01 2.85
106 107 3.945285 ACTTTATGACCGCCAATGGTAAG 59.055 43.478 0.00 0.00 44.01 2.34
107 108 1.961793 TATGACCGCCAATGGTAAGC 58.038 50.000 0.00 0.00 44.01 3.09
111 112 2.469516 CCGCCAATGGTAAGCCGAC 61.470 63.158 0.00 0.00 37.67 4.79
112 113 2.808958 CGCCAATGGTAAGCCGACG 61.809 63.158 0.00 0.00 37.67 5.12
113 114 1.448893 GCCAATGGTAAGCCGACGA 60.449 57.895 0.00 0.00 37.67 4.20
116 117 1.153429 AATGGTAAGCCGACGAGCC 60.153 57.895 0.00 0.00 37.67 4.70
118 119 4.125695 GGTAAGCCGACGAGCCGT 62.126 66.667 0.00 0.00 45.10 5.68
119 120 2.126189 GTAAGCCGACGAGCCGTT 60.126 61.111 0.00 0.00 41.37 4.44
120 121 2.126228 TAAGCCGACGAGCCGTTG 60.126 61.111 0.00 7.71 41.37 4.10
134 135 3.723348 GTTGGGCCAACGTCGAGC 61.723 66.667 31.75 9.33 34.63 5.03
158 159 4.353437 GACGACGGGGCGTGTCTT 62.353 66.667 3.37 0.00 45.72 3.01
159 160 3.853597 GACGACGGGGCGTGTCTTT 62.854 63.158 3.37 0.00 45.72 2.52
165 166 4.043200 GGGCGTGTCTTTGCAGGC 62.043 66.667 2.63 2.63 45.98 4.85
171 172 2.250939 TGTCTTTGCAGGCGAACCG 61.251 57.895 0.00 0.00 42.76 4.44
205 206 1.406898 TCCGAGCAGCTAGAGTCAATG 59.593 52.381 3.70 0.00 0.00 2.82
242 244 1.894756 GCGTTGCCTGGGTTGTGTA 60.895 57.895 0.00 0.00 0.00 2.90
247 249 0.250124 TGCCTGGGTTGTGTAGTTCG 60.250 55.000 0.00 0.00 0.00 3.95
275 278 2.422303 CAATCCATGGAAGGCGCAT 58.578 52.632 20.67 0.00 0.00 4.73
306 309 0.107017 CGGATGCACCAAATCCTCCT 60.107 55.000 1.98 0.00 41.35 3.69
377 381 0.457851 CCGGTTGTTGTGCTTTTGGA 59.542 50.000 0.00 0.00 0.00 3.53
403 407 2.922503 TTGGACAGAGAGGCGGCA 60.923 61.111 13.08 0.00 0.00 5.69
417 421 3.460868 GGCAGGGGAAAATGGGCG 61.461 66.667 0.00 0.00 0.00 6.13
419 423 3.460868 CAGGGGAAAATGGGCGGC 61.461 66.667 0.00 0.00 0.00 6.53
439 443 3.781307 CAATGACGGCGGAGGGGA 61.781 66.667 13.24 0.00 0.00 4.81
440 444 3.006728 AATGACGGCGGAGGGGAA 61.007 61.111 13.24 0.00 0.00 3.97
445 449 3.712907 CGGCGGAGGGGAAGGAAA 61.713 66.667 0.00 0.00 0.00 3.13
455 459 4.223953 GAGGGGAAGGAAAAGAAAAAGGT 58.776 43.478 0.00 0.00 0.00 3.50
456 460 3.967326 AGGGGAAGGAAAAGAAAAAGGTG 59.033 43.478 0.00 0.00 0.00 4.00
457 461 3.709653 GGGGAAGGAAAAGAAAAAGGTGT 59.290 43.478 0.00 0.00 0.00 4.16
458 462 4.897076 GGGGAAGGAAAAGAAAAAGGTGTA 59.103 41.667 0.00 0.00 0.00 2.90
469 473 4.351111 AGAAAAAGGTGTATCTGTGTCCCT 59.649 41.667 0.00 0.00 0.00 4.20
491 495 2.677848 GGAGGGCCAGGGAAGAAC 59.322 66.667 6.18 0.00 0.00 3.01
498 502 1.770324 CCAGGGAAGAACAAGGGCT 59.230 57.895 0.00 0.00 0.00 5.19
506 510 4.699522 AACAAGGGCTCGCGTCCC 62.700 66.667 24.77 24.77 44.25 4.46
533 537 1.525077 GTGCGTGTCCCTTTCCACA 60.525 57.895 0.00 0.00 0.00 4.17
541 545 2.096248 GTCCCTTTCCACACAAACACA 58.904 47.619 0.00 0.00 0.00 3.72
545 549 3.056179 CCCTTTCCACACAAACACAGTTT 60.056 43.478 0.00 0.00 0.00 2.66
623 638 1.063469 CCGCACGTTGAGAACAGTTTT 59.937 47.619 0.00 0.00 0.00 2.43
630 645 4.210537 ACGTTGAGAACAGTTTTATGTCCG 59.789 41.667 0.00 0.00 31.50 4.79
633 648 6.492254 GTTGAGAACAGTTTTATGTCCGTTT 58.508 36.000 0.00 0.00 31.50 3.60
634 649 7.517101 CGTTGAGAACAGTTTTATGTCCGTTTA 60.517 37.037 0.00 0.00 31.50 2.01
635 650 7.181143 TGAGAACAGTTTTATGTCCGTTTAC 57.819 36.000 0.00 0.00 31.50 2.01
636 651 6.203338 TGAGAACAGTTTTATGTCCGTTTACC 59.797 38.462 0.00 0.00 31.50 2.85
637 652 6.056884 AGAACAGTTTTATGTCCGTTTACCA 58.943 36.000 0.00 0.00 31.50 3.25
638 653 6.713450 AGAACAGTTTTATGTCCGTTTACCAT 59.287 34.615 0.00 0.00 31.50 3.55
639 654 6.249035 ACAGTTTTATGTCCGTTTACCATG 57.751 37.500 0.00 0.00 0.00 3.66
640 655 5.766174 ACAGTTTTATGTCCGTTTACCATGT 59.234 36.000 0.00 0.00 0.00 3.21
641 656 6.263617 ACAGTTTTATGTCCGTTTACCATGTT 59.736 34.615 0.00 0.00 0.00 2.71
642 657 6.580791 CAGTTTTATGTCCGTTTACCATGTTG 59.419 38.462 0.00 0.00 0.00 3.33
643 658 5.630661 TTTATGTCCGTTTACCATGTTGG 57.369 39.130 0.00 0.00 45.02 3.77
644 659 2.932855 TGTCCGTTTACCATGTTGGA 57.067 45.000 0.00 0.00 40.96 3.53
645 660 2.773487 TGTCCGTTTACCATGTTGGAG 58.227 47.619 0.00 0.00 40.96 3.86
646 661 2.105134 TGTCCGTTTACCATGTTGGAGT 59.895 45.455 0.00 0.00 40.96 3.85
647 662 3.143728 GTCCGTTTACCATGTTGGAGTT 58.856 45.455 0.00 0.00 40.96 3.01
648 663 3.058501 GTCCGTTTACCATGTTGGAGTTG 60.059 47.826 0.00 0.00 40.96 3.16
649 664 2.227865 CCGTTTACCATGTTGGAGTTGG 59.772 50.000 0.00 0.00 40.96 3.77
650 665 2.351350 CGTTTACCATGTTGGAGTTGGC 60.351 50.000 0.00 0.00 40.96 4.52
651 666 1.917872 TTACCATGTTGGAGTTGGCC 58.082 50.000 0.00 0.00 40.96 5.36
652 667 1.072266 TACCATGTTGGAGTTGGCCT 58.928 50.000 3.32 0.00 40.96 5.19
653 668 1.072266 ACCATGTTGGAGTTGGCCTA 58.928 50.000 3.32 0.00 40.96 3.93
654 669 1.427368 ACCATGTTGGAGTTGGCCTAA 59.573 47.619 3.32 0.00 40.96 2.69
655 670 2.094675 CCATGTTGGAGTTGGCCTAAG 58.905 52.381 3.32 0.00 40.96 2.18
656 671 1.474077 CATGTTGGAGTTGGCCTAAGC 59.526 52.381 3.32 0.00 38.76 3.09
726 748 1.144057 CAGAGTCATGTACCGCCCC 59.856 63.158 0.00 0.00 0.00 5.80
785 807 4.215742 CGCATCCGGGCCGTCTAA 62.216 66.667 26.32 7.63 0.00 2.10
787 809 2.108362 CATCCGGGCCGTCTAACC 59.892 66.667 26.32 0.00 0.00 2.85
799 823 2.621998 CCGTCTAACCCATACATCGACT 59.378 50.000 0.00 0.00 0.00 4.18
924 950 0.621571 CCTCCCTTCTCCCCACATCA 60.622 60.000 0.00 0.00 0.00 3.07
957 1003 3.917760 CCCTCGCCTCCGATCCAC 61.918 72.222 0.00 0.00 43.47 4.02
962 1008 4.530857 GCCTCCGATCCACACCCG 62.531 72.222 0.00 0.00 0.00 5.28
1704 1786 7.644490 ACTGTAGTTAATTCGTGATTTTGCAA 58.356 30.769 0.00 0.00 0.00 4.08
1726 1820 3.334583 TGCTTAGATGTTGTCAGGTCC 57.665 47.619 0.00 0.00 0.00 4.46
1745 1839 6.155049 CAGGTCCCCATACTGAAATTTTCAAT 59.845 38.462 12.62 5.85 39.58 2.57
1779 1873 5.066634 TGTTGCCATTCGAGTAAAACTGAAA 59.933 36.000 0.00 0.00 0.00 2.69
1785 1879 7.145323 CCATTCGAGTAAAACTGAAATTGGTT 58.855 34.615 0.00 0.00 0.00 3.67
1805 1899 8.844441 TTGGTTAACTTTGTTAATTTCTCACG 57.156 30.769 5.42 0.00 0.00 4.35
1806 1900 7.419204 TGGTTAACTTTGTTAATTTCTCACGG 58.581 34.615 5.42 0.00 0.00 4.94
1807 1901 6.859508 GGTTAACTTTGTTAATTTCTCACGGG 59.140 38.462 5.42 0.00 0.00 5.28
1808 1902 7.420002 GTTAACTTTGTTAATTTCTCACGGGT 58.580 34.615 0.00 0.00 0.00 5.28
1809 1903 6.459670 AACTTTGTTAATTTCTCACGGGTT 57.540 33.333 0.00 0.00 0.00 4.11
1810 1904 7.571080 AACTTTGTTAATTTCTCACGGGTTA 57.429 32.000 0.00 0.00 0.00 2.85
1811 1905 7.754851 ACTTTGTTAATTTCTCACGGGTTAT 57.245 32.000 0.00 0.00 0.00 1.89
1812 1906 8.173542 ACTTTGTTAATTTCTCACGGGTTATT 57.826 30.769 0.00 0.00 0.00 1.40
1813 1907 8.294577 ACTTTGTTAATTTCTCACGGGTTATTC 58.705 33.333 0.00 0.00 0.00 1.75
1814 1908 6.746745 TGTTAATTTCTCACGGGTTATTCC 57.253 37.500 0.00 0.00 0.00 3.01
1815 1909 6.478129 TGTTAATTTCTCACGGGTTATTCCT 58.522 36.000 0.00 0.00 36.25 3.36
1816 1910 6.943718 TGTTAATTTCTCACGGGTTATTCCTT 59.056 34.615 0.00 0.00 36.25 3.36
1817 1911 7.449086 TGTTAATTTCTCACGGGTTATTCCTTT 59.551 33.333 0.00 0.00 36.25 3.11
1818 1912 6.911250 AATTTCTCACGGGTTATTCCTTTT 57.089 33.333 0.00 0.00 36.25 2.27
1819 1913 6.911250 ATTTCTCACGGGTTATTCCTTTTT 57.089 33.333 0.00 0.00 36.25 1.94
1850 1944 4.455877 GGACTTGTAATCCACCAAGAACAG 59.544 45.833 6.41 0.00 40.36 3.16
1851 1945 3.821033 ACTTGTAATCCACCAAGAACAGC 59.179 43.478 6.41 0.00 40.36 4.40
1853 1947 4.098914 TGTAATCCACCAAGAACAGCTT 57.901 40.909 0.00 0.00 37.29 3.74
1854 1948 5.235850 TGTAATCCACCAAGAACAGCTTA 57.764 39.130 0.00 0.00 34.31 3.09
1855 1949 5.815581 TGTAATCCACCAAGAACAGCTTAT 58.184 37.500 0.00 0.00 34.31 1.73
1856 1950 5.647658 TGTAATCCACCAAGAACAGCTTATG 59.352 40.000 0.00 0.00 34.31 1.90
1857 1951 3.788227 TCCACCAAGAACAGCTTATGT 57.212 42.857 0.00 0.00 46.97 2.29
1858 1952 3.411446 TCCACCAAGAACAGCTTATGTG 58.589 45.455 0.00 0.00 43.00 3.21
1859 1953 2.095059 CCACCAAGAACAGCTTATGTGC 60.095 50.000 0.00 0.00 43.00 4.57
1861 1955 3.077359 ACCAAGAACAGCTTATGTGCTC 58.923 45.455 0.00 0.00 45.57 4.26
1862 1956 3.076621 CCAAGAACAGCTTATGTGCTCA 58.923 45.455 0.00 0.00 45.57 4.26
1863 1957 3.120060 CCAAGAACAGCTTATGTGCTCAC 60.120 47.826 0.00 0.00 45.57 3.51
1864 1958 3.407424 AGAACAGCTTATGTGCTCACA 57.593 42.857 5.08 5.08 45.57 3.58
1867 1961 4.580167 AGAACAGCTTATGTGCTCACAAAA 59.420 37.500 6.81 0.00 45.57 2.44
1868 1962 5.242393 AGAACAGCTTATGTGCTCACAAAAT 59.758 36.000 6.81 0.00 45.57 1.82
1869 1963 5.051891 ACAGCTTATGTGCTCACAAAATC 57.948 39.130 6.81 0.00 45.41 2.17
1871 1965 2.848302 GCTTATGTGCTCACAAAATCGC 59.152 45.455 6.81 2.85 45.41 4.58
1872 1966 3.670359 GCTTATGTGCTCACAAAATCGCA 60.670 43.478 6.81 0.00 45.41 5.10
1873 1967 4.475028 CTTATGTGCTCACAAAATCGCAA 58.525 39.130 6.81 0.00 45.41 4.85
1875 1969 1.403323 TGTGCTCACAAAATCGCAACA 59.597 42.857 0.00 0.00 38.56 3.33
1877 1971 2.406024 GTGCTCACAAAATCGCAACATG 59.594 45.455 0.00 0.00 33.74 3.21
1878 1972 2.034432 TGCTCACAAAATCGCAACATGT 59.966 40.909 0.00 0.00 0.00 3.21
1879 1973 2.658325 GCTCACAAAATCGCAACATGTC 59.342 45.455 0.00 0.00 0.00 3.06
1880 1974 3.852939 GCTCACAAAATCGCAACATGTCA 60.853 43.478 0.00 0.00 0.00 3.58
1881 1975 3.887741 TCACAAAATCGCAACATGTCAG 58.112 40.909 0.00 0.00 0.00 3.51
1883 1977 3.665409 CACAAAATCGCAACATGTCAGAC 59.335 43.478 0.00 0.00 0.00 3.51
1884 1978 3.565482 ACAAAATCGCAACATGTCAGACT 59.435 39.130 0.00 0.00 0.00 3.24
1885 1979 4.153986 CAAAATCGCAACATGTCAGACTC 58.846 43.478 0.00 0.00 0.00 3.36
1886 1980 2.749280 ATCGCAACATGTCAGACTCA 57.251 45.000 0.00 0.00 0.00 3.41
1887 1981 2.070262 TCGCAACATGTCAGACTCAG 57.930 50.000 0.00 0.00 0.00 3.35
1888 1982 1.073964 CGCAACATGTCAGACTCAGG 58.926 55.000 0.00 0.00 0.00 3.86
1889 1983 1.446907 GCAACATGTCAGACTCAGGG 58.553 55.000 0.00 0.00 0.00 4.45
1890 1984 1.446907 CAACATGTCAGACTCAGGGC 58.553 55.000 0.00 0.00 0.00 5.19
1891 1985 1.059098 AACATGTCAGACTCAGGGCA 58.941 50.000 0.00 0.00 0.00 5.36
1892 1986 0.612229 ACATGTCAGACTCAGGGCAG 59.388 55.000 1.31 0.00 0.00 4.85
1893 1987 0.743701 CATGTCAGACTCAGGGCAGC 60.744 60.000 1.31 0.00 0.00 5.25
1896 1990 0.390998 GTCAGACTCAGGGCAGCTTC 60.391 60.000 0.00 0.00 0.00 3.86
1899 1993 0.324285 AGACTCAGGGCAGCTTCTTG 59.676 55.000 0.00 0.00 0.00 3.02
1900 1994 0.676151 GACTCAGGGCAGCTTCTTGG 60.676 60.000 0.00 0.00 0.00 3.61
1902 1996 2.362120 CAGGGCAGCTTCTTGGGG 60.362 66.667 0.00 0.00 0.00 4.96
1903 1997 2.860971 AGGGCAGCTTCTTGGGGT 60.861 61.111 0.00 0.00 0.00 4.95
1912 2006 4.889995 GCAGCTTCTTGGGGTAAATTAGAT 59.110 41.667 0.00 0.00 0.00 1.98
1915 2009 4.261197 GCTTCTTGGGGTAAATTAGATGCG 60.261 45.833 0.00 0.00 0.00 4.73
1917 2011 4.850680 TCTTGGGGTAAATTAGATGCGTT 58.149 39.130 0.00 0.00 0.00 4.84
1918 2012 5.258051 TCTTGGGGTAAATTAGATGCGTTT 58.742 37.500 0.00 0.00 0.00 3.60
1922 2016 4.142249 GGGGTAAATTAGATGCGTTTTGCT 60.142 41.667 0.00 0.00 46.63 3.91
1926 2020 7.542824 GGGTAAATTAGATGCGTTTTGCTAAAA 59.457 33.333 0.00 0.00 46.63 1.52
1927 2021 8.917655 GGTAAATTAGATGCGTTTTGCTAAAAA 58.082 29.630 0.00 0.00 46.63 1.94
1928 2022 9.937577 GTAAATTAGATGCGTTTTGCTAAAAAG 57.062 29.630 0.00 0.00 46.63 2.27
1962 2056 1.102809 TAGAAGCATTGCGCCCATGG 61.103 55.000 16.16 4.14 44.04 3.66
1963 2057 2.362760 AAGCATTGCGCCCATGGA 60.363 55.556 15.22 0.00 44.04 3.41
1966 2060 1.144496 GCATTGCGCCCATGGATTT 59.856 52.632 15.22 0.00 32.94 2.17
1975 2069 1.959282 GCCCATGGATTTTAGAGGCAG 59.041 52.381 15.22 0.00 38.79 4.85
1978 2072 2.175499 CCATGGATTTTAGAGGCAGGGA 59.825 50.000 5.56 0.00 0.00 4.20
2004 2098 3.924144 GCCAGATGCAACCAACATTTTA 58.076 40.909 0.00 0.00 40.77 1.52
2006 2100 4.937015 GCCAGATGCAACCAACATTTTATT 59.063 37.500 0.00 0.00 40.77 1.40
2008 2102 6.256321 GCCAGATGCAACCAACATTTTATTAG 59.744 38.462 0.00 0.00 40.77 1.73
2010 2104 7.363705 CCAGATGCAACCAACATTTTATTAGGA 60.364 37.037 0.00 0.00 0.00 2.94
2011 2105 8.199449 CAGATGCAACCAACATTTTATTAGGAT 58.801 33.333 0.00 0.00 0.00 3.24
2012 2106 8.199449 AGATGCAACCAACATTTTATTAGGATG 58.801 33.333 0.00 0.00 0.00 3.51
2013 2107 7.238486 TGCAACCAACATTTTATTAGGATGT 57.762 32.000 0.00 0.00 35.65 3.06
2014 2108 7.319646 TGCAACCAACATTTTATTAGGATGTC 58.680 34.615 0.00 0.00 33.16 3.06
2015 2109 7.039434 TGCAACCAACATTTTATTAGGATGTCA 60.039 33.333 0.00 0.00 33.16 3.58
2016 2110 7.816995 GCAACCAACATTTTATTAGGATGTCAA 59.183 33.333 0.00 0.00 33.16 3.18
2017 2111 9.139174 CAACCAACATTTTATTAGGATGTCAAC 57.861 33.333 0.00 0.00 33.16 3.18
2018 2112 8.415950 ACCAACATTTTATTAGGATGTCAACA 57.584 30.769 0.00 0.00 33.16 3.33
2052 2146 7.523219 TGTTAATTGTTGCTATTAAGACACCG 58.477 34.615 0.00 0.00 30.41 4.94
2098 2192 9.443283 GTACTACACTAGGTAATTATGTGAACG 57.557 37.037 13.74 0.00 33.41 3.95
2099 2193 6.976925 ACTACACTAGGTAATTATGTGAACGC 59.023 38.462 13.74 0.00 33.41 4.84
2100 2194 5.726397 ACACTAGGTAATTATGTGAACGCA 58.274 37.500 13.74 0.00 33.41 5.24
2101 2195 5.579511 ACACTAGGTAATTATGTGAACGCAC 59.420 40.000 13.74 0.00 45.35 5.34
2102 2196 5.006358 CACTAGGTAATTATGTGAACGCACC 59.994 44.000 0.00 0.00 44.51 5.01
2103 2197 3.945346 AGGTAATTATGTGAACGCACCA 58.055 40.909 0.00 0.00 44.51 4.17
2104 2198 4.328536 AGGTAATTATGTGAACGCACCAA 58.671 39.130 0.00 0.00 44.51 3.67
2105 2199 4.394920 AGGTAATTATGTGAACGCACCAAG 59.605 41.667 0.00 0.00 44.51 3.61
2106 2200 4.155280 GGTAATTATGTGAACGCACCAAGT 59.845 41.667 0.00 0.00 44.51 3.16
2107 2201 4.846779 AATTATGTGAACGCACCAAGTT 57.153 36.364 0.00 0.00 44.51 2.66
2108 2202 3.889196 TTATGTGAACGCACCAAGTTC 57.111 42.857 2.49 2.49 44.51 3.01
2109 2203 1.967319 ATGTGAACGCACCAAGTTCT 58.033 45.000 9.94 0.00 45.84 3.01
2110 2204 1.745232 TGTGAACGCACCAAGTTCTT 58.255 45.000 9.94 0.00 45.84 2.52
2111 2205 1.400142 TGTGAACGCACCAAGTTCTTG 59.600 47.619 9.94 5.66 45.84 3.02
2112 2206 1.400494 GTGAACGCACCAAGTTCTTGT 59.600 47.619 10.93 0.00 45.84 3.16
2113 2207 2.610374 GTGAACGCACCAAGTTCTTGTA 59.390 45.455 10.93 0.00 45.84 2.41
2114 2208 3.064271 GTGAACGCACCAAGTTCTTGTAA 59.936 43.478 10.93 0.00 45.84 2.41
2115 2209 3.880490 TGAACGCACCAAGTTCTTGTAAT 59.120 39.130 10.93 0.00 45.84 1.89
2116 2210 3.896648 ACGCACCAAGTTCTTGTAATG 57.103 42.857 10.93 7.68 0.00 1.90
2117 2211 3.472652 ACGCACCAAGTTCTTGTAATGA 58.527 40.909 10.93 0.00 0.00 2.57
2118 2212 4.072131 ACGCACCAAGTTCTTGTAATGAT 58.928 39.130 10.93 0.00 0.00 2.45
2119 2213 4.518970 ACGCACCAAGTTCTTGTAATGATT 59.481 37.500 10.93 0.00 0.00 2.57
2120 2214 5.088739 CGCACCAAGTTCTTGTAATGATTC 58.911 41.667 10.93 0.00 0.00 2.52
2121 2215 5.334802 CGCACCAAGTTCTTGTAATGATTCA 60.335 40.000 10.93 0.00 0.00 2.57
2122 2216 6.446318 GCACCAAGTTCTTGTAATGATTCAA 58.554 36.000 10.93 0.00 0.00 2.69
2123 2217 7.092716 GCACCAAGTTCTTGTAATGATTCAAT 58.907 34.615 10.93 0.00 0.00 2.57
2124 2218 7.599998 GCACCAAGTTCTTGTAATGATTCAATT 59.400 33.333 10.93 0.00 0.00 2.32
2125 2219 9.132521 CACCAAGTTCTTGTAATGATTCAATTC 57.867 33.333 10.93 0.00 0.00 2.17
2126 2220 9.082313 ACCAAGTTCTTGTAATGATTCAATTCT 57.918 29.630 10.93 0.00 0.00 2.40
2127 2221 9.350357 CCAAGTTCTTGTAATGATTCAATTCTG 57.650 33.333 10.93 0.00 0.00 3.02
2128 2222 9.903682 CAAGTTCTTGTAATGATTCAATTCTGT 57.096 29.630 4.58 0.00 0.00 3.41
2150 2244 9.607988 TCTGTATGTTTATGTACCTTTGTATGG 57.392 33.333 0.00 0.00 0.00 2.74
2151 2245 9.607988 CTGTATGTTTATGTACCTTTGTATGGA 57.392 33.333 0.00 0.00 0.00 3.41
2175 2269 9.413048 GGATATACTACATTCTAACTTGAGTGC 57.587 37.037 0.00 0.00 0.00 4.40
2176 2270 9.967346 GATATACTACATTCTAACTTGAGTGCA 57.033 33.333 0.00 0.00 0.00 4.57
2179 2273 7.369803 ACTACATTCTAACTTGAGTGCATTG 57.630 36.000 0.00 0.00 0.00 2.82
2180 2274 5.633830 ACATTCTAACTTGAGTGCATTGG 57.366 39.130 0.00 0.00 0.00 3.16
2181 2275 4.082571 ACATTCTAACTTGAGTGCATTGGC 60.083 41.667 0.00 0.00 41.68 4.52
2199 2293 1.818642 GCAAGAGCCATTCACTGTCT 58.181 50.000 0.00 0.00 33.58 3.41
2200 2294 2.977914 GCAAGAGCCATTCACTGTCTA 58.022 47.619 0.00 0.00 33.58 2.59
2201 2295 3.539604 GCAAGAGCCATTCACTGTCTAT 58.460 45.455 0.00 0.00 33.58 1.98
2202 2296 3.311871 GCAAGAGCCATTCACTGTCTATG 59.688 47.826 0.00 0.00 33.58 2.23
2203 2297 4.763073 CAAGAGCCATTCACTGTCTATGA 58.237 43.478 1.36 0.00 0.00 2.15
2204 2298 4.669206 AGAGCCATTCACTGTCTATGAG 57.331 45.455 1.36 0.00 0.00 2.90
2205 2299 4.285020 AGAGCCATTCACTGTCTATGAGA 58.715 43.478 1.36 0.00 0.00 3.27
2206 2300 4.900652 AGAGCCATTCACTGTCTATGAGAT 59.099 41.667 1.36 0.00 0.00 2.75
2207 2301 6.073981 AGAGCCATTCACTGTCTATGAGATA 58.926 40.000 1.36 0.00 0.00 1.98
2208 2302 6.725369 AGAGCCATTCACTGTCTATGAGATAT 59.275 38.462 1.36 0.00 0.00 1.63
2209 2303 6.699366 AGCCATTCACTGTCTATGAGATATG 58.301 40.000 1.36 0.00 0.00 1.78
2210 2304 5.350914 GCCATTCACTGTCTATGAGATATGC 59.649 44.000 1.36 0.00 0.00 3.14
2211 2305 5.575995 CCATTCACTGTCTATGAGATATGCG 59.424 44.000 1.36 0.00 0.00 4.73
2212 2306 4.166187 TCACTGTCTATGAGATATGCGC 57.834 45.455 0.00 0.00 0.00 6.09
2213 2307 3.057245 TCACTGTCTATGAGATATGCGCC 60.057 47.826 4.18 0.00 0.00 6.53
2214 2308 2.893489 ACTGTCTATGAGATATGCGCCA 59.107 45.455 4.18 0.00 0.00 5.69
2215 2309 3.249091 CTGTCTATGAGATATGCGCCAC 58.751 50.000 4.18 0.00 0.00 5.01
2216 2310 2.893489 TGTCTATGAGATATGCGCCACT 59.107 45.455 4.18 0.00 0.00 4.00
2217 2311 3.249091 GTCTATGAGATATGCGCCACTG 58.751 50.000 4.18 0.00 0.00 3.66
2218 2312 1.998315 CTATGAGATATGCGCCACTGC 59.002 52.381 4.18 0.00 0.00 4.40
2225 2319 2.281692 TGCGCCACTGCACATTCT 60.282 55.556 4.18 0.00 40.62 2.40
2226 2320 2.327343 TGCGCCACTGCACATTCTC 61.327 57.895 4.18 0.00 40.62 2.87
2227 2321 3.044059 GCGCCACTGCACATTCTCC 62.044 63.158 0.00 0.00 37.32 3.71
2228 2322 1.672030 CGCCACTGCACATTCTCCA 60.672 57.895 0.00 0.00 37.32 3.86
2229 2323 1.028330 CGCCACTGCACATTCTCCAT 61.028 55.000 0.00 0.00 37.32 3.41
2230 2324 0.737219 GCCACTGCACATTCTCCATC 59.263 55.000 0.00 0.00 37.47 3.51
2231 2325 1.681166 GCCACTGCACATTCTCCATCT 60.681 52.381 0.00 0.00 37.47 2.90
2232 2326 2.719739 CCACTGCACATTCTCCATCTT 58.280 47.619 0.00 0.00 0.00 2.40
2233 2327 3.087031 CCACTGCACATTCTCCATCTTT 58.913 45.455 0.00 0.00 0.00 2.52
2234 2328 3.119602 CCACTGCACATTCTCCATCTTTG 60.120 47.826 0.00 0.00 0.00 2.77
2235 2329 3.087031 ACTGCACATTCTCCATCTTTGG 58.913 45.455 0.00 0.00 45.15 3.28
2236 2330 2.426024 CTGCACATTCTCCATCTTTGGG 59.574 50.000 0.00 0.00 43.81 4.12
2237 2331 2.225091 TGCACATTCTCCATCTTTGGGT 60.225 45.455 0.00 0.00 43.81 4.51
2238 2332 3.010027 TGCACATTCTCCATCTTTGGGTA 59.990 43.478 0.00 0.00 43.81 3.69
2239 2333 4.210331 GCACATTCTCCATCTTTGGGTAT 58.790 43.478 0.00 0.00 43.81 2.73
2240 2334 4.037208 GCACATTCTCCATCTTTGGGTATG 59.963 45.833 0.00 0.00 43.81 2.39
2241 2335 4.581824 CACATTCTCCATCTTTGGGTATGG 59.418 45.833 0.00 0.00 43.81 2.74
2242 2336 3.951563 TTCTCCATCTTTGGGTATGGG 57.048 47.619 0.00 0.00 43.81 4.00
2243 2337 3.144068 TCTCCATCTTTGGGTATGGGA 57.856 47.619 0.00 0.00 43.81 4.37
2244 2338 3.048600 TCTCCATCTTTGGGTATGGGAG 58.951 50.000 0.00 0.00 43.81 4.30
2245 2339 1.494721 TCCATCTTTGGGTATGGGAGC 59.505 52.381 0.00 0.00 43.81 4.70
2246 2340 1.215173 CCATCTTTGGGTATGGGAGCA 59.785 52.381 0.00 0.00 39.23 4.26
2247 2341 2.579873 CATCTTTGGGTATGGGAGCAG 58.420 52.381 0.00 0.00 0.00 4.24
2248 2342 1.668826 TCTTTGGGTATGGGAGCAGT 58.331 50.000 0.00 0.00 0.00 4.40
2249 2343 1.992557 TCTTTGGGTATGGGAGCAGTT 59.007 47.619 0.00 0.00 0.00 3.16
2250 2344 2.026262 TCTTTGGGTATGGGAGCAGTTC 60.026 50.000 0.00 0.00 0.00 3.01
2251 2345 1.367346 TTGGGTATGGGAGCAGTTCA 58.633 50.000 0.00 0.00 0.00 3.18
2252 2346 1.595311 TGGGTATGGGAGCAGTTCAT 58.405 50.000 0.00 0.00 0.00 2.57
2253 2347 1.212688 TGGGTATGGGAGCAGTTCATG 59.787 52.381 0.00 0.00 0.00 3.07
2254 2348 1.212935 GGGTATGGGAGCAGTTCATGT 59.787 52.381 0.00 0.00 0.00 3.21
2255 2349 2.357154 GGGTATGGGAGCAGTTCATGTT 60.357 50.000 0.00 0.00 0.00 2.71
2256 2350 3.356290 GGTATGGGAGCAGTTCATGTTT 58.644 45.455 0.00 0.00 0.00 2.83
2257 2351 3.129287 GGTATGGGAGCAGTTCATGTTTG 59.871 47.826 0.00 0.00 0.00 2.93
2258 2352 2.363306 TGGGAGCAGTTCATGTTTGT 57.637 45.000 0.00 0.00 0.00 2.83
2259 2353 1.955778 TGGGAGCAGTTCATGTTTGTG 59.044 47.619 0.00 0.00 0.00 3.33
2260 2354 1.956477 GGGAGCAGTTCATGTTTGTGT 59.044 47.619 0.00 0.00 0.00 3.72
2261 2355 2.362077 GGGAGCAGTTCATGTTTGTGTT 59.638 45.455 0.00 0.00 0.00 3.32
2262 2356 3.181476 GGGAGCAGTTCATGTTTGTGTTT 60.181 43.478 0.00 0.00 0.00 2.83
2263 2357 4.432712 GGAGCAGTTCATGTTTGTGTTTT 58.567 39.130 0.00 0.00 0.00 2.43
2264 2358 4.268405 GGAGCAGTTCATGTTTGTGTTTTG 59.732 41.667 0.00 0.00 0.00 2.44
2265 2359 5.070770 AGCAGTTCATGTTTGTGTTTTGA 57.929 34.783 0.00 0.00 0.00 2.69
2266 2360 5.663456 AGCAGTTCATGTTTGTGTTTTGAT 58.337 33.333 0.00 0.00 0.00 2.57
2267 2361 5.521010 AGCAGTTCATGTTTGTGTTTTGATG 59.479 36.000 0.00 0.00 0.00 3.07
2268 2362 5.519566 GCAGTTCATGTTTGTGTTTTGATGA 59.480 36.000 0.00 0.00 0.00 2.92
2269 2363 6.201425 GCAGTTCATGTTTGTGTTTTGATGAT 59.799 34.615 0.00 0.00 0.00 2.45
2270 2364 7.560700 CAGTTCATGTTTGTGTTTTGATGATG 58.439 34.615 0.00 0.00 0.00 3.07
2271 2365 7.223193 CAGTTCATGTTTGTGTTTTGATGATGT 59.777 33.333 0.00 0.00 0.00 3.06
2272 2366 7.765360 AGTTCATGTTTGTGTTTTGATGATGTT 59.235 29.630 0.00 0.00 0.00 2.71
2273 2367 9.029243 GTTCATGTTTGTGTTTTGATGATGTTA 57.971 29.630 0.00 0.00 0.00 2.41
2274 2368 8.572828 TCATGTTTGTGTTTTGATGATGTTAC 57.427 30.769 0.00 0.00 0.00 2.50
2275 2369 8.412456 TCATGTTTGTGTTTTGATGATGTTACT 58.588 29.630 0.00 0.00 0.00 2.24
2276 2370 9.676195 CATGTTTGTGTTTTGATGATGTTACTA 57.324 29.630 0.00 0.00 0.00 1.82
2298 2392 7.752695 ACTATATTTTAAGAGTTGTGCTGTGC 58.247 34.615 0.00 0.00 0.00 4.57
2299 2393 3.332761 TTTTAAGAGTTGTGCTGTGCG 57.667 42.857 0.00 0.00 0.00 5.34
2300 2394 2.232756 TTAAGAGTTGTGCTGTGCGA 57.767 45.000 0.00 0.00 0.00 5.10
2301 2395 1.783284 TAAGAGTTGTGCTGTGCGAG 58.217 50.000 0.00 0.00 0.00 5.03
2302 2396 0.179073 AAGAGTTGTGCTGTGCGAGT 60.179 50.000 0.00 0.00 0.00 4.18
2303 2397 0.673985 AGAGTTGTGCTGTGCGAGTA 59.326 50.000 0.00 0.00 0.00 2.59
2304 2398 1.273606 AGAGTTGTGCTGTGCGAGTAT 59.726 47.619 0.00 0.00 0.00 2.12
2305 2399 1.391485 GAGTTGTGCTGTGCGAGTATG 59.609 52.381 0.00 0.00 0.00 2.39
2306 2400 1.000843 AGTTGTGCTGTGCGAGTATGA 59.999 47.619 0.00 0.00 0.00 2.15
2307 2401 1.798223 GTTGTGCTGTGCGAGTATGAA 59.202 47.619 0.00 0.00 0.00 2.57
2308 2402 1.713597 TGTGCTGTGCGAGTATGAAG 58.286 50.000 0.00 0.00 0.00 3.02
2309 2403 1.272212 TGTGCTGTGCGAGTATGAAGA 59.728 47.619 0.00 0.00 0.00 2.87
2310 2404 2.288763 TGTGCTGTGCGAGTATGAAGAA 60.289 45.455 0.00 0.00 0.00 2.52
2311 2405 2.736721 GTGCTGTGCGAGTATGAAGAAA 59.263 45.455 0.00 0.00 0.00 2.52
2312 2406 3.372206 GTGCTGTGCGAGTATGAAGAAAT 59.628 43.478 0.00 0.00 0.00 2.17
2313 2407 4.566759 GTGCTGTGCGAGTATGAAGAAATA 59.433 41.667 0.00 0.00 0.00 1.40
2314 2408 4.566759 TGCTGTGCGAGTATGAAGAAATAC 59.433 41.667 0.00 0.00 33.90 1.89
2315 2409 4.806247 GCTGTGCGAGTATGAAGAAATACT 59.194 41.667 0.00 0.00 44.30 2.12
2316 2410 5.977725 GCTGTGCGAGTATGAAGAAATACTA 59.022 40.000 0.00 0.00 42.22 1.82
2317 2411 6.642950 GCTGTGCGAGTATGAAGAAATACTAT 59.357 38.462 0.00 0.00 42.22 2.12
2318 2412 7.169982 GCTGTGCGAGTATGAAGAAATACTATT 59.830 37.037 0.00 0.00 42.22 1.73
2319 2413 8.352752 TGTGCGAGTATGAAGAAATACTATTG 57.647 34.615 0.00 0.00 42.22 1.90
2320 2414 7.979537 TGTGCGAGTATGAAGAAATACTATTGT 59.020 33.333 0.00 0.00 42.22 2.71
2321 2415 8.818057 GTGCGAGTATGAAGAAATACTATTGTT 58.182 33.333 0.00 0.00 42.22 2.83
2343 2437 9.921637 TTGTTACTGCCTAAATTAATTTCAAGG 57.078 29.630 16.56 18.20 31.61 3.61
2344 2438 9.084533 TGTTACTGCCTAAATTAATTTCAAGGT 57.915 29.630 22.38 15.78 31.26 3.50
2345 2439 9.923143 GTTACTGCCTAAATTAATTTCAAGGTT 57.077 29.630 22.38 13.91 31.26 3.50
2347 2441 8.831715 ACTGCCTAAATTAATTTCAAGGTTTG 57.168 30.769 22.38 16.82 31.26 2.93
2348 2442 8.428852 ACTGCCTAAATTAATTTCAAGGTTTGT 58.571 29.630 22.38 17.23 31.26 2.83
2349 2443 9.921637 CTGCCTAAATTAATTTCAAGGTTTGTA 57.078 29.630 22.38 9.87 31.26 2.41
2350 2444 9.921637 TGCCTAAATTAATTTCAAGGTTTGTAG 57.078 29.630 22.38 10.53 31.26 2.74
2351 2445 9.923143 GCCTAAATTAATTTCAAGGTTTGTAGT 57.077 29.630 22.38 0.00 31.26 2.73
2360 2454 7.883391 TTTCAAGGTTTGTAGTTTGATACCA 57.117 32.000 0.00 0.00 30.45 3.25
2361 2455 7.504924 TTCAAGGTTTGTAGTTTGATACCAG 57.495 36.000 0.00 0.00 30.45 4.00
2362 2456 6.001460 TCAAGGTTTGTAGTTTGATACCAGG 58.999 40.000 0.00 0.00 0.00 4.45
2363 2457 4.332828 AGGTTTGTAGTTTGATACCAGGC 58.667 43.478 0.00 0.00 0.00 4.85
2364 2458 4.042934 AGGTTTGTAGTTTGATACCAGGCT 59.957 41.667 0.00 0.00 0.00 4.58
2365 2459 4.395231 GGTTTGTAGTTTGATACCAGGCTC 59.605 45.833 0.00 0.00 0.00 4.70
2366 2460 5.246307 GTTTGTAGTTTGATACCAGGCTCT 58.754 41.667 0.00 0.00 0.00 4.09
2367 2461 5.499004 TTGTAGTTTGATACCAGGCTCTT 57.501 39.130 0.00 0.00 0.00 2.85
2368 2462 5.499004 TGTAGTTTGATACCAGGCTCTTT 57.501 39.130 0.00 0.00 0.00 2.52
2369 2463 5.245531 TGTAGTTTGATACCAGGCTCTTTG 58.754 41.667 0.00 0.00 0.00 2.77
2370 2464 4.373156 AGTTTGATACCAGGCTCTTTGT 57.627 40.909 0.00 0.00 0.00 2.83
2371 2465 4.074970 AGTTTGATACCAGGCTCTTTGTG 58.925 43.478 0.00 0.00 0.00 3.33
2372 2466 2.113860 TGATACCAGGCTCTTTGTGC 57.886 50.000 0.00 0.00 0.00 4.57
2373 2467 1.350684 TGATACCAGGCTCTTTGTGCA 59.649 47.619 0.00 0.00 0.00 4.57
2374 2468 2.012673 GATACCAGGCTCTTTGTGCAG 58.987 52.381 0.00 0.00 0.00 4.41
2375 2469 1.055849 TACCAGGCTCTTTGTGCAGA 58.944 50.000 0.00 0.00 0.00 4.26
2376 2470 0.183492 ACCAGGCTCTTTGTGCAGAA 59.817 50.000 0.00 0.00 0.00 3.02
2377 2471 1.321474 CCAGGCTCTTTGTGCAGAAA 58.679 50.000 8.90 8.90 0.00 2.52
2378 2472 1.891150 CCAGGCTCTTTGTGCAGAAAT 59.109 47.619 9.73 0.00 0.00 2.17
2379 2473 2.094854 CCAGGCTCTTTGTGCAGAAATC 60.095 50.000 9.73 2.60 0.00 2.17
2380 2474 2.818432 CAGGCTCTTTGTGCAGAAATCT 59.182 45.455 9.73 3.16 0.00 2.40
2381 2475 3.255149 CAGGCTCTTTGTGCAGAAATCTT 59.745 43.478 9.73 0.00 0.00 2.40
2382 2476 3.893813 AGGCTCTTTGTGCAGAAATCTTT 59.106 39.130 9.73 0.00 0.00 2.52
2383 2477 5.048504 CAGGCTCTTTGTGCAGAAATCTTTA 60.049 40.000 9.73 0.00 0.00 1.85
2384 2478 5.048434 AGGCTCTTTGTGCAGAAATCTTTAC 60.048 40.000 9.73 0.00 0.00 2.01
2385 2479 5.048434 GGCTCTTTGTGCAGAAATCTTTACT 60.048 40.000 9.73 0.00 0.00 2.24
2386 2480 5.855395 GCTCTTTGTGCAGAAATCTTTACTG 59.145 40.000 9.73 0.00 35.14 2.74
2387 2481 6.514048 GCTCTTTGTGCAGAAATCTTTACTGT 60.514 38.462 9.73 0.00 34.60 3.55
2388 2482 7.333528 TCTTTGTGCAGAAATCTTTACTGTT 57.666 32.000 9.73 0.00 34.60 3.16
2389 2483 7.195646 TCTTTGTGCAGAAATCTTTACTGTTG 58.804 34.615 9.73 0.00 34.60 3.33
2390 2484 5.437289 TGTGCAGAAATCTTTACTGTTGG 57.563 39.130 0.00 0.00 34.60 3.77
2391 2485 4.887071 TGTGCAGAAATCTTTACTGTTGGT 59.113 37.500 0.00 0.00 34.60 3.67
2392 2486 6.058833 TGTGCAGAAATCTTTACTGTTGGTA 58.941 36.000 0.00 0.00 34.60 3.25
2393 2487 6.544197 TGTGCAGAAATCTTTACTGTTGGTAA 59.456 34.615 0.00 0.00 38.48 2.85
2394 2488 7.230510 TGTGCAGAAATCTTTACTGTTGGTAAT 59.769 33.333 0.00 0.00 39.75 1.89
2395 2489 8.082242 GTGCAGAAATCTTTACTGTTGGTAATT 58.918 33.333 0.00 0.00 39.75 1.40
2396 2490 8.637986 TGCAGAAATCTTTACTGTTGGTAATTT 58.362 29.630 0.00 0.00 39.75 1.82
2397 2491 8.915654 GCAGAAATCTTTACTGTTGGTAATTTG 58.084 33.333 0.00 0.00 39.75 2.32
2409 2503 9.131791 ACTGTTGGTAATTTGAATTTCTGTAGT 57.868 29.630 0.00 0.00 0.00 2.73
2410 2504 9.965824 CTGTTGGTAATTTGAATTTCTGTAGTT 57.034 29.630 0.00 0.00 0.00 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.144716 TGTCCTCATCTGCATCCGC 59.855 57.895 0.00 0.00 39.24 5.54
2 3 0.179034 GGGTGTCCTCATCTGCATCC 60.179 60.000 0.00 0.00 0.00 3.51
5 6 0.543277 GATGGGTGTCCTCATCTGCA 59.457 55.000 0.00 0.00 37.41 4.41
6 7 0.835941 AGATGGGTGTCCTCATCTGC 59.164 55.000 4.34 0.00 45.68 4.26
9 10 0.531532 CGCAGATGGGTGTCCTCATC 60.532 60.000 0.00 0.00 39.85 2.92
10 11 0.977627 TCGCAGATGGGTGTCCTCAT 60.978 55.000 0.00 0.00 0.00 2.90
11 12 0.977627 ATCGCAGATGGGTGTCCTCA 60.978 55.000 0.00 0.00 45.12 3.86
15 16 1.009829 GAACATCGCAGATGGGTGTC 58.990 55.000 18.34 9.28 45.12 3.67
16 17 0.392998 GGAACATCGCAGATGGGTGT 60.393 55.000 18.34 0.00 45.12 4.16
18 19 1.153369 CGGAACATCGCAGATGGGT 60.153 57.895 18.34 9.08 45.12 4.51
19 20 1.889105 CCGGAACATCGCAGATGGG 60.889 63.158 18.34 9.17 45.12 4.00
20 21 1.153369 ACCGGAACATCGCAGATGG 60.153 57.895 9.46 6.82 45.12 3.51
21 22 0.740868 ACACCGGAACATCGCAGATG 60.741 55.000 9.46 14.34 45.12 2.90
22 23 0.740868 CACACCGGAACATCGCAGAT 60.741 55.000 9.46 0.00 45.12 2.90
23 24 1.374125 CACACCGGAACATCGCAGA 60.374 57.895 9.46 0.00 45.75 4.26
24 25 2.390599 CCACACCGGAACATCGCAG 61.391 63.158 9.46 0.00 36.56 5.18
25 26 1.817911 TACCACACCGGAACATCGCA 61.818 55.000 9.46 0.00 38.63 5.10
26 27 1.079681 TACCACACCGGAACATCGC 60.080 57.895 9.46 0.00 38.63 4.58
27 28 0.528924 TCTACCACACCGGAACATCG 59.471 55.000 9.46 0.00 38.63 3.84
28 29 2.754946 TTCTACCACACCGGAACATC 57.245 50.000 9.46 0.00 38.63 3.06
29 30 3.143728 GTTTTCTACCACACCGGAACAT 58.856 45.455 9.46 0.00 38.63 2.71
31 32 1.528161 CGTTTTCTACCACACCGGAAC 59.472 52.381 9.46 0.00 38.63 3.62
32 33 1.540797 CCGTTTTCTACCACACCGGAA 60.541 52.381 9.46 0.00 38.63 4.30
33 34 0.033781 CCGTTTTCTACCACACCGGA 59.966 55.000 9.46 0.00 38.63 5.14
35 36 1.864176 GCCGTTTTCTACCACACCG 59.136 57.895 0.00 0.00 0.00 4.94
36 37 0.600782 TCGCCGTTTTCTACCACACC 60.601 55.000 0.00 0.00 0.00 4.16
37 38 1.219646 TTCGCCGTTTTCTACCACAC 58.780 50.000 0.00 0.00 0.00 3.82
38 39 1.598601 GTTTCGCCGTTTTCTACCACA 59.401 47.619 0.00 0.00 0.00 4.17
39 40 1.397567 CGTTTCGCCGTTTTCTACCAC 60.398 52.381 0.00 0.00 0.00 4.16
40 41 0.860533 CGTTTCGCCGTTTTCTACCA 59.139 50.000 0.00 0.00 0.00 3.25
41 42 1.136529 GTCGTTTCGCCGTTTTCTACC 60.137 52.381 0.00 0.00 0.00 3.18
43 44 1.139163 GGTCGTTTCGCCGTTTTCTA 58.861 50.000 0.00 0.00 0.00 2.10
44 45 0.531311 AGGTCGTTTCGCCGTTTTCT 60.531 50.000 0.00 0.00 0.00 2.52
45 46 0.383860 CAGGTCGTTTCGCCGTTTTC 60.384 55.000 0.00 0.00 0.00 2.29
48 49 3.343421 GCAGGTCGTTTCGCCGTT 61.343 61.111 0.00 0.00 0.00 4.44
53 54 3.777925 CTGCGGCAGGTCGTTTCG 61.778 66.667 22.11 0.00 0.00 3.46
54 55 3.423154 CCTGCGGCAGGTCGTTTC 61.423 66.667 35.42 0.00 45.82 2.78
69 70 3.596066 AAGTGCGCGATGACTGCCT 62.596 57.895 12.10 0.00 0.00 4.75
70 71 1.358725 TAAAGTGCGCGATGACTGCC 61.359 55.000 12.10 0.00 0.00 4.85
71 72 0.652592 ATAAAGTGCGCGATGACTGC 59.347 50.000 12.10 0.00 0.00 4.40
74 75 1.004927 GGTCATAAAGTGCGCGATGAC 60.005 52.381 21.53 21.53 44.85 3.06
75 76 1.286501 GGTCATAAAGTGCGCGATGA 58.713 50.000 12.10 5.97 0.00 2.92
76 77 0.043053 CGGTCATAAAGTGCGCGATG 60.043 55.000 12.10 3.06 0.00 3.84
77 78 1.762222 GCGGTCATAAAGTGCGCGAT 61.762 55.000 12.10 0.00 31.50 4.58
78 79 2.449525 GCGGTCATAAAGTGCGCGA 61.450 57.895 12.10 0.00 31.50 5.87
79 80 2.021380 GCGGTCATAAAGTGCGCG 59.979 61.111 0.00 0.00 31.50 6.86
80 81 1.917782 TTGGCGGTCATAAAGTGCGC 61.918 55.000 0.00 0.00 38.21 6.09
81 82 0.732571 ATTGGCGGTCATAAAGTGCG 59.267 50.000 0.00 0.00 0.00 5.34
82 83 1.202290 CCATTGGCGGTCATAAAGTGC 60.202 52.381 0.00 0.00 0.00 4.40
83 84 2.091541 ACCATTGGCGGTCATAAAGTG 58.908 47.619 1.54 0.00 32.11 3.16
84 85 2.507407 ACCATTGGCGGTCATAAAGT 57.493 45.000 1.54 0.00 32.11 2.66
85 86 3.243068 GCTTACCATTGGCGGTCATAAAG 60.243 47.826 1.54 0.00 40.67 1.85
86 87 2.685897 GCTTACCATTGGCGGTCATAAA 59.314 45.455 1.54 0.00 40.67 1.40
87 88 2.294074 GCTTACCATTGGCGGTCATAA 58.706 47.619 1.54 0.00 40.67 1.90
89 90 0.751643 GGCTTACCATTGGCGGTCAT 60.752 55.000 1.54 0.00 40.67 3.06
90 91 1.377987 GGCTTACCATTGGCGGTCA 60.378 57.895 1.54 0.00 40.67 4.02
95 96 1.429148 CTCGTCGGCTTACCATTGGC 61.429 60.000 1.54 0.00 34.57 4.52
98 99 1.153429 GGCTCGTCGGCTTACCATT 60.153 57.895 5.82 0.00 34.57 3.16
100 101 4.124351 CGGCTCGTCGGCTTACCA 62.124 66.667 5.82 0.00 34.57 3.25
101 102 3.637926 AACGGCTCGTCGGCTTACC 62.638 63.158 0.69 0.00 39.99 2.85
102 103 2.126189 AACGGCTCGTCGGCTTAC 60.126 61.111 0.69 0.00 39.99 2.34
103 104 2.126228 CAACGGCTCGTCGGCTTA 60.126 61.111 0.69 0.00 39.99 3.09
142 143 3.920196 AAAGACACGCCCCGTCGT 61.920 61.111 0.00 0.00 44.35 4.34
144 145 3.723348 GCAAAGACACGCCCCGTC 61.723 66.667 0.00 0.00 38.32 4.79
147 148 3.365265 CCTGCAAAGACACGCCCC 61.365 66.667 0.00 0.00 0.00 5.80
148 149 4.043200 GCCTGCAAAGACACGCCC 62.043 66.667 0.00 0.00 0.00 6.13
149 150 4.389576 CGCCTGCAAAGACACGCC 62.390 66.667 0.00 0.00 0.00 5.68
150 151 2.892334 TTCGCCTGCAAAGACACGC 61.892 57.895 0.00 0.00 0.00 5.34
151 152 1.082756 GTTCGCCTGCAAAGACACG 60.083 57.895 0.00 0.00 0.00 4.49
152 153 1.282875 GGTTCGCCTGCAAAGACAC 59.717 57.895 0.00 0.00 0.00 3.67
154 155 2.171489 GACGGTTCGCCTGCAAAGAC 62.171 60.000 0.00 0.00 34.30 3.01
155 156 1.959226 GACGGTTCGCCTGCAAAGA 60.959 57.895 0.00 0.00 34.30 2.52
156 157 2.556287 GACGGTTCGCCTGCAAAG 59.444 61.111 0.00 0.00 34.30 2.77
157 158 3.342627 CGACGGTTCGCCTGCAAA 61.343 61.111 0.00 0.00 38.71 3.68
158 159 4.287781 TCGACGGTTCGCCTGCAA 62.288 61.111 0.00 0.00 45.46 4.08
171 172 0.801067 CTCGGATTTGTCCCGTCGAC 60.801 60.000 5.18 5.18 46.53 4.20
183 184 1.769026 TGACTCTAGCTGCTCGGATT 58.231 50.000 4.91 0.02 0.00 3.01
192 193 0.907486 TGCAGGCATTGACTCTAGCT 59.093 50.000 2.41 0.00 0.00 3.32
247 249 1.697432 TCCATGGATTGGTCGGGTATC 59.303 52.381 11.44 0.00 46.52 2.24
282 285 3.636929 ATTTGGTGCATCCGGCCGA 62.637 57.895 30.73 13.82 43.89 5.54
306 309 3.958798 GGCCAACTAGTAGACCTGTGATA 59.041 47.826 3.59 0.00 0.00 2.15
314 317 0.100146 CCGACGGCCAACTAGTAGAC 59.900 60.000 2.24 0.00 0.00 2.59
335 338 4.742201 TGCTTCTCTCGCACCGGC 62.742 66.667 0.00 0.00 31.40 6.13
431 435 2.579410 TTTCTTTTCCTTCCCCTCCG 57.421 50.000 0.00 0.00 0.00 4.63
438 442 7.862873 CACAGATACACCTTTTTCTTTTCCTTC 59.137 37.037 0.00 0.00 0.00 3.46
439 443 7.342026 ACACAGATACACCTTTTTCTTTTCCTT 59.658 33.333 0.00 0.00 0.00 3.36
440 444 6.833933 ACACAGATACACCTTTTTCTTTTCCT 59.166 34.615 0.00 0.00 0.00 3.36
445 449 5.070685 GGGACACAGATACACCTTTTTCTT 58.929 41.667 0.00 0.00 0.00 2.52
455 459 1.182667 CCGTCAGGGACACAGATACA 58.817 55.000 0.00 0.00 38.47 2.29
476 480 1.770324 CTTGTTCTTCCCTGGCCCT 59.230 57.895 0.00 0.00 0.00 5.19
486 490 1.668151 GACGCGAGCCCTTGTTCTT 60.668 57.895 15.93 0.00 0.00 2.52
489 493 4.699522 GGGACGCGAGCCCTTGTT 62.700 66.667 26.84 0.00 42.07 2.83
506 510 2.164673 GACACGCACGAACGAACG 59.835 61.111 8.71 6.65 36.70 3.95
508 512 2.632136 AAGGGACACGCACGAACGAA 62.632 55.000 8.71 0.00 36.70 3.85
509 513 2.632136 AAAGGGACACGCACGAACGA 62.632 55.000 8.71 0.00 36.70 3.85
516 520 1.525077 GTGTGGAAAGGGACACGCA 60.525 57.895 0.00 0.00 44.95 5.24
583 587 2.299867 GGGTGCAAATGGACAAACATCT 59.700 45.455 7.37 0.00 38.19 2.90
601 605 1.594293 CTGTTCTCAACGTGCGGGT 60.594 57.895 0.00 0.00 0.00 5.28
609 613 5.668558 ACGGACATAAAACTGTTCTCAAC 57.331 39.130 0.00 0.00 0.00 3.18
611 615 6.203338 GGTAAACGGACATAAAACTGTTCTCA 59.797 38.462 0.00 0.00 35.01 3.27
614 618 6.303021 TGGTAAACGGACATAAAACTGTTC 57.697 37.500 0.00 0.00 35.01 3.18
623 638 4.020039 ACTCCAACATGGTAAACGGACATA 60.020 41.667 0.00 0.00 39.03 2.29
630 645 2.029380 GGCCAACTCCAACATGGTAAAC 60.029 50.000 0.00 0.00 39.03 2.01
633 648 1.072266 AGGCCAACTCCAACATGGTA 58.928 50.000 5.01 0.00 39.03 3.25
634 649 1.072266 TAGGCCAACTCCAACATGGT 58.928 50.000 5.01 0.00 39.03 3.55
635 650 2.094675 CTTAGGCCAACTCCAACATGG 58.905 52.381 5.01 0.00 39.43 3.66
636 651 1.474077 GCTTAGGCCAACTCCAACATG 59.526 52.381 5.01 0.00 0.00 3.21
637 652 1.839424 GCTTAGGCCAACTCCAACAT 58.161 50.000 5.01 0.00 0.00 2.71
638 653 3.339547 GCTTAGGCCAACTCCAACA 57.660 52.632 5.01 0.00 0.00 3.33
649 664 1.396653 TCGTAGGTGTAGGCTTAGGC 58.603 55.000 0.00 0.00 37.82 3.93
650 665 2.957006 ACATCGTAGGTGTAGGCTTAGG 59.043 50.000 0.00 0.00 0.00 2.69
651 666 3.380637 ACACATCGTAGGTGTAGGCTTAG 59.619 47.826 0.00 0.00 46.94 2.18
652 667 3.359033 ACACATCGTAGGTGTAGGCTTA 58.641 45.455 0.00 0.00 46.94 3.09
653 668 2.176889 ACACATCGTAGGTGTAGGCTT 58.823 47.619 0.00 0.00 46.94 4.35
654 669 1.848652 ACACATCGTAGGTGTAGGCT 58.151 50.000 7.52 0.00 46.94 4.58
660 675 0.037326 ACCAGCACACATCGTAGGTG 60.037 55.000 0.00 0.00 41.95 4.00
661 676 1.552578 TACCAGCACACATCGTAGGT 58.447 50.000 0.00 0.00 32.85 3.08
662 677 2.890808 ATACCAGCACACATCGTAGG 57.109 50.000 0.00 0.00 0.00 3.18
783 805 2.359848 CCGTCAGTCGATGTATGGGTTA 59.640 50.000 0.00 0.00 42.86 2.85
785 807 0.744874 CCGTCAGTCGATGTATGGGT 59.255 55.000 0.00 0.00 42.86 4.51
787 809 0.385751 AGCCGTCAGTCGATGTATGG 59.614 55.000 0.00 0.00 42.86 2.74
842 867 1.600916 GGCTGTGGTTGGTGGAGAC 60.601 63.158 0.00 0.00 0.00 3.36
869 894 7.388638 TTTATATAGGAAAGTGGAAGGAGGG 57.611 40.000 0.00 0.00 0.00 4.30
924 950 4.437587 GGGGGCTGCAGATGCTGT 62.438 66.667 20.43 0.00 42.66 4.40
957 1003 4.016706 GTGTGGGGAGGTCGGGTG 62.017 72.222 0.00 0.00 0.00 4.61
962 1008 3.391382 CGAGGGTGTGGGGAGGTC 61.391 72.222 0.00 0.00 0.00 3.85
1704 1786 4.265073 GGACCTGACAACATCTAAGCAAT 58.735 43.478 0.00 0.00 0.00 3.56
1726 1820 8.338259 CGTAGAGATTGAAAATTTCAGTATGGG 58.662 37.037 8.51 0.00 41.38 4.00
1779 1873 9.458374 CGTGAGAAATTAACAAAGTTAACCAAT 57.542 29.630 0.88 0.00 0.00 3.16
1785 1879 7.571080 AACCCGTGAGAAATTAACAAAGTTA 57.429 32.000 0.00 0.00 0.00 2.24
1816 1910 6.361433 TGGATTACAAGTCCACTGAGAAAAA 58.639 36.000 0.00 0.00 40.72 1.94
1817 1911 5.935945 TGGATTACAAGTCCACTGAGAAAA 58.064 37.500 0.00 0.00 40.72 2.29
1818 1912 5.560722 TGGATTACAAGTCCACTGAGAAA 57.439 39.130 0.00 0.00 40.72 2.52
1826 1920 4.141367 TGTTCTTGGTGGATTACAAGTCCA 60.141 41.667 0.00 0.00 43.40 4.02
1827 1921 4.394729 TGTTCTTGGTGGATTACAAGTCC 58.605 43.478 0.00 0.00 43.40 3.85
1835 1929 4.460382 CACATAAGCTGTTCTTGGTGGATT 59.540 41.667 0.00 0.00 37.56 3.01
1841 1935 3.076621 TGAGCACATAAGCTGTTCTTGG 58.923 45.455 0.00 0.00 46.75 3.61
1850 1944 2.848302 GCGATTTTGTGAGCACATAAGC 59.152 45.455 3.90 7.89 41.52 3.09
1851 1945 4.082274 TGCGATTTTGTGAGCACATAAG 57.918 40.909 3.90 0.00 41.52 1.73
1853 1947 3.251972 TGTTGCGATTTTGTGAGCACATA 59.748 39.130 3.90 0.00 41.52 2.29
1854 1948 2.034432 TGTTGCGATTTTGTGAGCACAT 59.966 40.909 3.90 0.00 41.52 3.21
1855 1949 1.403323 TGTTGCGATTTTGTGAGCACA 59.597 42.857 0.00 0.00 39.51 4.57
1856 1950 2.118228 TGTTGCGATTTTGTGAGCAC 57.882 45.000 0.00 0.00 39.51 4.40
1857 1951 2.034432 ACATGTTGCGATTTTGTGAGCA 59.966 40.909 0.00 0.00 37.89 4.26
1858 1952 2.658325 GACATGTTGCGATTTTGTGAGC 59.342 45.455 0.00 0.00 0.00 4.26
1859 1953 3.887741 TGACATGTTGCGATTTTGTGAG 58.112 40.909 0.00 0.00 0.00 3.51
1861 1955 3.665409 GTCTGACATGTTGCGATTTTGTG 59.335 43.478 0.00 0.00 0.00 3.33
1862 1956 3.565482 AGTCTGACATGTTGCGATTTTGT 59.435 39.130 10.88 0.00 0.00 2.83
1863 1957 4.151258 AGTCTGACATGTTGCGATTTTG 57.849 40.909 10.88 0.00 0.00 2.44
1864 1958 3.814842 TGAGTCTGACATGTTGCGATTTT 59.185 39.130 10.88 0.00 0.00 1.82
1867 1961 2.614779 CTGAGTCTGACATGTTGCGAT 58.385 47.619 10.88 0.00 0.00 4.58
1868 1962 1.337167 CCTGAGTCTGACATGTTGCGA 60.337 52.381 10.88 0.00 0.00 5.10
1869 1963 1.073964 CCTGAGTCTGACATGTTGCG 58.926 55.000 10.88 0.00 0.00 4.85
1871 1965 1.271001 TGCCCTGAGTCTGACATGTTG 60.271 52.381 10.88 0.00 0.00 3.33
1872 1966 1.002888 CTGCCCTGAGTCTGACATGTT 59.997 52.381 10.88 0.00 0.00 2.71
1873 1967 0.612229 CTGCCCTGAGTCTGACATGT 59.388 55.000 10.88 0.00 0.00 3.21
1875 1969 0.908656 AGCTGCCCTGAGTCTGACAT 60.909 55.000 10.88 0.00 0.00 3.06
1877 1971 0.390998 GAAGCTGCCCTGAGTCTGAC 60.391 60.000 0.00 0.00 0.00 3.51
1878 1972 0.543883 AGAAGCTGCCCTGAGTCTGA 60.544 55.000 0.00 0.00 0.00 3.27
1879 1973 0.324285 AAGAAGCTGCCCTGAGTCTG 59.676 55.000 0.00 0.00 0.00 3.51
1880 1974 0.324285 CAAGAAGCTGCCCTGAGTCT 59.676 55.000 0.00 0.00 0.00 3.24
1881 1975 0.676151 CCAAGAAGCTGCCCTGAGTC 60.676 60.000 0.00 0.00 0.00 3.36
1883 1977 1.378250 CCCAAGAAGCTGCCCTGAG 60.378 63.158 0.00 0.00 0.00 3.35
1884 1978 2.759114 CCCAAGAAGCTGCCCTGA 59.241 61.111 0.00 0.00 0.00 3.86
1885 1979 1.852157 TACCCCAAGAAGCTGCCCTG 61.852 60.000 0.00 0.00 0.00 4.45
1886 1980 1.140134 TTACCCCAAGAAGCTGCCCT 61.140 55.000 0.00 0.00 0.00 5.19
1887 1981 0.251608 TTTACCCCAAGAAGCTGCCC 60.252 55.000 0.00 0.00 0.00 5.36
1888 1982 1.852633 ATTTACCCCAAGAAGCTGCC 58.147 50.000 0.00 0.00 0.00 4.85
1889 1983 4.270008 TCTAATTTACCCCAAGAAGCTGC 58.730 43.478 0.00 0.00 0.00 5.25
1890 1984 5.221126 GCATCTAATTTACCCCAAGAAGCTG 60.221 44.000 0.00 0.00 30.45 4.24
1891 1985 4.889995 GCATCTAATTTACCCCAAGAAGCT 59.110 41.667 0.00 0.00 30.45 3.74
1892 1986 4.261197 CGCATCTAATTTACCCCAAGAAGC 60.261 45.833 0.00 0.00 0.00 3.86
1893 1987 4.881850 ACGCATCTAATTTACCCCAAGAAG 59.118 41.667 0.00 0.00 0.00 2.85
1896 1990 5.576447 AAACGCATCTAATTTACCCCAAG 57.424 39.130 0.00 0.00 0.00 3.61
1899 1993 4.109766 GCAAAACGCATCTAATTTACCCC 58.890 43.478 0.00 0.00 41.79 4.95
1900 1994 4.993905 AGCAAAACGCATCTAATTTACCC 58.006 39.130 0.00 0.00 46.13 3.69
1902 1996 9.937577 CTTTTTAGCAAAACGCATCTAATTTAC 57.062 29.630 0.00 0.00 46.13 2.01
1903 1997 9.900710 TCTTTTTAGCAAAACGCATCTAATTTA 57.099 25.926 0.00 0.00 46.13 1.40
1912 2006 5.885881 TCTTCTTCTTTTTAGCAAAACGCA 58.114 33.333 0.00 0.00 46.13 5.24
1917 2011 9.289782 AGCTTATCTCTTCTTCTTTTTAGCAAA 57.710 29.630 0.00 0.00 0.00 3.68
1918 2012 8.854614 AGCTTATCTCTTCTTCTTTTTAGCAA 57.145 30.769 0.00 0.00 0.00 3.91
1926 2020 7.416964 TGCTTCTAGCTTATCTCTTCTTCTT 57.583 36.000 0.00 0.00 42.97 2.52
1927 2021 7.601705 ATGCTTCTAGCTTATCTCTTCTTCT 57.398 36.000 0.00 0.00 42.97 2.85
1928 2022 7.307337 GCAATGCTTCTAGCTTATCTCTTCTTC 60.307 40.741 0.00 0.00 42.97 2.87
1962 2056 3.067320 GCATGTTCCCTGCCTCTAAAATC 59.933 47.826 0.00 0.00 33.44 2.17
1963 2057 3.026694 GCATGTTCCCTGCCTCTAAAAT 58.973 45.455 0.00 0.00 33.44 1.82
1966 2060 3.882131 GCATGTTCCCTGCCTCTAA 57.118 52.632 0.00 0.00 33.44 2.10
1987 2081 7.981225 ACATCCTAATAAAATGTTGGTTGCATC 59.019 33.333 0.00 0.00 29.51 3.91
2038 2132 5.874895 AAAAACTCCGGTGTCTTAATAGC 57.125 39.130 10.05 0.00 0.00 2.97
2072 2166 9.443283 CGTTCACATAATTACCTAGTGTAGTAC 57.557 37.037 0.00 0.00 0.00 2.73
2090 2184 1.967319 AGAACTTGGTGCGTTCACAT 58.033 45.000 5.80 0.00 44.87 3.21
2091 2185 1.400142 CAAGAACTTGGTGCGTTCACA 59.600 47.619 6.66 0.00 44.87 3.58
2092 2186 1.400494 ACAAGAACTTGGTGCGTTCAC 59.600 47.619 17.05 0.00 44.45 3.18
2093 2187 1.745232 ACAAGAACTTGGTGCGTTCA 58.255 45.000 17.05 0.00 44.45 3.18
2094 2188 3.955771 TTACAAGAACTTGGTGCGTTC 57.044 42.857 17.05 0.00 44.45 3.95
2095 2189 3.880490 TCATTACAAGAACTTGGTGCGTT 59.120 39.130 17.05 0.16 44.45 4.84
2096 2190 3.472652 TCATTACAAGAACTTGGTGCGT 58.527 40.909 17.05 0.78 44.45 5.24
2097 2191 4.685169 ATCATTACAAGAACTTGGTGCG 57.315 40.909 17.05 5.17 44.45 5.34
2098 2192 6.012658 TGAATCATTACAAGAACTTGGTGC 57.987 37.500 17.05 3.98 44.45 5.01
2099 2193 9.132521 GAATTGAATCATTACAAGAACTTGGTG 57.867 33.333 17.05 12.57 44.45 4.17
2100 2194 9.082313 AGAATTGAATCATTACAAGAACTTGGT 57.918 29.630 17.05 7.05 44.45 3.67
2101 2195 9.350357 CAGAATTGAATCATTACAAGAACTTGG 57.650 33.333 17.05 1.84 44.45 3.61
2102 2196 9.903682 ACAGAATTGAATCATTACAAGAACTTG 57.096 29.630 12.22 12.22 45.58 3.16
2124 2218 9.607988 CCATACAAAGGTACATAAACATACAGA 57.392 33.333 0.00 0.00 30.94 3.41
2125 2219 9.607988 TCCATACAAAGGTACATAAACATACAG 57.392 33.333 0.00 0.00 30.94 2.74
2149 2243 9.413048 GCACTCAAGTTAGAATGTAGTATATCC 57.587 37.037 0.00 0.00 0.00 2.59
2150 2244 9.967346 TGCACTCAAGTTAGAATGTAGTATATC 57.033 33.333 0.00 0.00 0.00 1.63
2153 2247 9.102757 CAATGCACTCAAGTTAGAATGTAGTAT 57.897 33.333 0.00 0.00 0.00 2.12
2154 2248 7.549134 CCAATGCACTCAAGTTAGAATGTAGTA 59.451 37.037 0.00 0.00 0.00 1.82
2155 2249 6.372659 CCAATGCACTCAAGTTAGAATGTAGT 59.627 38.462 0.00 0.00 0.00 2.73
2156 2250 6.676456 GCCAATGCACTCAAGTTAGAATGTAG 60.676 42.308 0.00 0.00 37.47 2.74
2157 2251 5.123820 GCCAATGCACTCAAGTTAGAATGTA 59.876 40.000 0.00 0.00 37.47 2.29
2158 2252 4.082571 GCCAATGCACTCAAGTTAGAATGT 60.083 41.667 0.00 0.00 37.47 2.71
2159 2253 4.082625 TGCCAATGCACTCAAGTTAGAATG 60.083 41.667 0.00 0.00 44.23 2.67
2160 2254 4.081406 TGCCAATGCACTCAAGTTAGAAT 58.919 39.130 0.00 0.00 44.23 2.40
2161 2255 3.485394 TGCCAATGCACTCAAGTTAGAA 58.515 40.909 0.00 0.00 44.23 2.10
2162 2256 3.138884 TGCCAATGCACTCAAGTTAGA 57.861 42.857 0.00 0.00 44.23 2.10
2186 2280 5.350914 GCATATCTCATAGACAGTGAATGGC 59.649 44.000 0.00 0.00 37.09 4.40
2187 2281 5.575995 CGCATATCTCATAGACAGTGAATGG 59.424 44.000 0.00 0.00 0.00 3.16
2188 2282 5.061933 GCGCATATCTCATAGACAGTGAATG 59.938 44.000 0.30 0.00 0.00 2.67
2189 2283 5.167121 GCGCATATCTCATAGACAGTGAAT 58.833 41.667 0.30 0.00 0.00 2.57
2190 2284 4.550422 GCGCATATCTCATAGACAGTGAA 58.450 43.478 0.30 0.00 0.00 3.18
2191 2285 3.057245 GGCGCATATCTCATAGACAGTGA 60.057 47.826 10.83 0.00 0.00 3.41
2192 2286 3.249091 GGCGCATATCTCATAGACAGTG 58.751 50.000 10.83 0.00 0.00 3.66
2193 2287 2.893489 TGGCGCATATCTCATAGACAGT 59.107 45.455 10.83 0.00 0.00 3.55
2194 2288 3.056962 AGTGGCGCATATCTCATAGACAG 60.057 47.826 10.83 0.00 0.00 3.51
2195 2289 2.893489 AGTGGCGCATATCTCATAGACA 59.107 45.455 10.83 0.00 0.00 3.41
2196 2290 3.249091 CAGTGGCGCATATCTCATAGAC 58.751 50.000 10.83 0.00 0.00 2.59
2197 2291 2.353109 GCAGTGGCGCATATCTCATAGA 60.353 50.000 10.83 0.00 0.00 1.98
2198 2292 1.998315 GCAGTGGCGCATATCTCATAG 59.002 52.381 10.83 0.00 0.00 2.23
2199 2293 1.344114 TGCAGTGGCGCATATCTCATA 59.656 47.619 10.83 0.00 45.35 2.15
2200 2294 0.107268 TGCAGTGGCGCATATCTCAT 59.893 50.000 10.83 0.00 45.35 2.90
2201 2295 1.521616 TGCAGTGGCGCATATCTCA 59.478 52.632 10.83 0.00 45.35 3.27
2202 2296 4.443857 TGCAGTGGCGCATATCTC 57.556 55.556 10.83 0.00 45.35 2.75
2210 2304 1.028330 ATGGAGAATGTGCAGTGGCG 61.028 55.000 0.00 0.00 45.35 5.69
2211 2305 0.737219 GATGGAGAATGTGCAGTGGC 59.263 55.000 0.00 0.00 41.68 5.01
2212 2306 2.414994 AGATGGAGAATGTGCAGTGG 57.585 50.000 0.00 0.00 0.00 4.00
2213 2307 4.092771 CAAAGATGGAGAATGTGCAGTG 57.907 45.455 0.00 0.00 0.00 3.66
2227 2321 2.092212 ACTGCTCCCATACCCAAAGATG 60.092 50.000 0.00 0.00 0.00 2.90
2228 2322 2.208872 ACTGCTCCCATACCCAAAGAT 58.791 47.619 0.00 0.00 0.00 2.40
2229 2323 1.668826 ACTGCTCCCATACCCAAAGA 58.331 50.000 0.00 0.00 0.00 2.52
2230 2324 2.290896 TGAACTGCTCCCATACCCAAAG 60.291 50.000 0.00 0.00 0.00 2.77
2231 2325 1.707989 TGAACTGCTCCCATACCCAAA 59.292 47.619 0.00 0.00 0.00 3.28
2232 2326 1.367346 TGAACTGCTCCCATACCCAA 58.633 50.000 0.00 0.00 0.00 4.12
2233 2327 1.212688 CATGAACTGCTCCCATACCCA 59.787 52.381 0.00 0.00 0.00 4.51
2234 2328 1.212935 ACATGAACTGCTCCCATACCC 59.787 52.381 0.00 0.00 0.00 3.69
2235 2329 2.717639 ACATGAACTGCTCCCATACC 57.282 50.000 0.00 0.00 0.00 2.73
2236 2330 3.758554 ACAAACATGAACTGCTCCCATAC 59.241 43.478 0.00 0.00 0.00 2.39
2237 2331 3.758023 CACAAACATGAACTGCTCCCATA 59.242 43.478 0.00 0.00 0.00 2.74
2238 2332 2.559668 CACAAACATGAACTGCTCCCAT 59.440 45.455 0.00 0.00 0.00 4.00
2239 2333 1.955778 CACAAACATGAACTGCTCCCA 59.044 47.619 0.00 0.00 0.00 4.37
2240 2334 1.956477 ACACAAACATGAACTGCTCCC 59.044 47.619 0.00 0.00 0.00 4.30
2241 2335 3.715628 AACACAAACATGAACTGCTCC 57.284 42.857 0.00 0.00 0.00 4.70
2242 2336 5.101628 TCAAAACACAAACATGAACTGCTC 58.898 37.500 0.00 0.00 0.00 4.26
2243 2337 5.070770 TCAAAACACAAACATGAACTGCT 57.929 34.783 0.00 0.00 0.00 4.24
2244 2338 5.519566 TCATCAAAACACAAACATGAACTGC 59.480 36.000 0.00 0.00 0.00 4.40
2245 2339 7.223193 ACATCATCAAAACACAAACATGAACTG 59.777 33.333 0.00 0.00 0.00 3.16
2246 2340 7.267128 ACATCATCAAAACACAAACATGAACT 58.733 30.769 0.00 0.00 0.00 3.01
2247 2341 7.467557 ACATCATCAAAACACAAACATGAAC 57.532 32.000 0.00 0.00 0.00 3.18
2248 2342 9.029243 GTAACATCATCAAAACACAAACATGAA 57.971 29.630 0.00 0.00 0.00 2.57
2249 2343 8.412456 AGTAACATCATCAAAACACAAACATGA 58.588 29.630 0.00 0.00 0.00 3.07
2250 2344 8.578308 AGTAACATCATCAAAACACAAACATG 57.422 30.769 0.00 0.00 0.00 3.21
2272 2366 8.879759 GCACAGCACAACTCTTAAAATATAGTA 58.120 33.333 0.00 0.00 0.00 1.82
2273 2367 7.413000 CGCACAGCACAACTCTTAAAATATAGT 60.413 37.037 0.00 0.00 0.00 2.12
2274 2368 6.901887 CGCACAGCACAACTCTTAAAATATAG 59.098 38.462 0.00 0.00 0.00 1.31
2275 2369 6.592220 TCGCACAGCACAACTCTTAAAATATA 59.408 34.615 0.00 0.00 0.00 0.86
2276 2370 5.411361 TCGCACAGCACAACTCTTAAAATAT 59.589 36.000 0.00 0.00 0.00 1.28
2277 2371 4.752604 TCGCACAGCACAACTCTTAAAATA 59.247 37.500 0.00 0.00 0.00 1.40
2278 2372 3.563808 TCGCACAGCACAACTCTTAAAAT 59.436 39.130 0.00 0.00 0.00 1.82
2279 2373 2.939756 TCGCACAGCACAACTCTTAAAA 59.060 40.909 0.00 0.00 0.00 1.52
2280 2374 2.543848 CTCGCACAGCACAACTCTTAAA 59.456 45.455 0.00 0.00 0.00 1.52
2281 2375 2.135139 CTCGCACAGCACAACTCTTAA 58.865 47.619 0.00 0.00 0.00 1.85
2282 2376 1.068588 ACTCGCACAGCACAACTCTTA 59.931 47.619 0.00 0.00 0.00 2.10
2283 2377 0.179073 ACTCGCACAGCACAACTCTT 60.179 50.000 0.00 0.00 0.00 2.85
2284 2378 0.673985 TACTCGCACAGCACAACTCT 59.326 50.000 0.00 0.00 0.00 3.24
2285 2379 1.391485 CATACTCGCACAGCACAACTC 59.609 52.381 0.00 0.00 0.00 3.01
2286 2380 1.000843 TCATACTCGCACAGCACAACT 59.999 47.619 0.00 0.00 0.00 3.16
2287 2381 1.428448 TCATACTCGCACAGCACAAC 58.572 50.000 0.00 0.00 0.00 3.32
2288 2382 2.068519 CTTCATACTCGCACAGCACAA 58.931 47.619 0.00 0.00 0.00 3.33
2289 2383 1.272212 TCTTCATACTCGCACAGCACA 59.728 47.619 0.00 0.00 0.00 4.57
2290 2384 1.996292 TCTTCATACTCGCACAGCAC 58.004 50.000 0.00 0.00 0.00 4.40
2291 2385 2.741759 TTCTTCATACTCGCACAGCA 57.258 45.000 0.00 0.00 0.00 4.41
2292 2386 4.806247 AGTATTTCTTCATACTCGCACAGC 59.194 41.667 0.00 0.00 35.40 4.40
2293 2387 8.483218 CAATAGTATTTCTTCATACTCGCACAG 58.517 37.037 0.00 0.00 40.02 3.66
2294 2388 7.979537 ACAATAGTATTTCTTCATACTCGCACA 59.020 33.333 0.00 0.00 40.02 4.57
2295 2389 8.354011 ACAATAGTATTTCTTCATACTCGCAC 57.646 34.615 0.00 0.00 40.02 5.34
2296 2390 8.942338 AACAATAGTATTTCTTCATACTCGCA 57.058 30.769 0.00 0.00 40.02 5.10
2317 2411 9.921637 CCTTGAAATTAATTTAGGCAGTAACAA 57.078 29.630 13.34 8.94 0.00 2.83
2318 2412 9.084533 ACCTTGAAATTAATTTAGGCAGTAACA 57.915 29.630 21.96 8.63 31.61 2.41
2319 2413 9.923143 AACCTTGAAATTAATTTAGGCAGTAAC 57.077 29.630 21.96 6.60 31.61 2.50
2321 2415 9.921637 CAAACCTTGAAATTAATTTAGGCAGTA 57.078 29.630 21.96 2.57 31.61 2.74
2322 2416 8.428852 ACAAACCTTGAAATTAATTTAGGCAGT 58.571 29.630 21.96 16.69 31.61 4.40
2323 2417 8.831715 ACAAACCTTGAAATTAATTTAGGCAG 57.168 30.769 21.96 16.24 31.61 4.85
2324 2418 9.921637 CTACAAACCTTGAAATTAATTTAGGCA 57.078 29.630 21.96 11.47 31.61 4.75
2325 2419 9.923143 ACTACAAACCTTGAAATTAATTTAGGC 57.077 29.630 21.96 9.44 31.61 3.93
2334 2428 8.919145 TGGTATCAAACTACAAACCTTGAAATT 58.081 29.630 0.00 0.00 31.94 1.82
2335 2429 8.472007 TGGTATCAAACTACAAACCTTGAAAT 57.528 30.769 0.00 0.00 31.94 2.17
2336 2430 7.013846 CCTGGTATCAAACTACAAACCTTGAAA 59.986 37.037 0.00 0.00 31.94 2.69
2337 2431 6.488683 CCTGGTATCAAACTACAAACCTTGAA 59.511 38.462 0.00 0.00 31.94 2.69
2338 2432 6.001460 CCTGGTATCAAACTACAAACCTTGA 58.999 40.000 0.00 0.00 32.67 3.02
2339 2433 5.335661 GCCTGGTATCAAACTACAAACCTTG 60.336 44.000 0.00 0.00 0.00 3.61
2340 2434 4.765339 GCCTGGTATCAAACTACAAACCTT 59.235 41.667 0.00 0.00 0.00 3.50
2341 2435 4.042934 AGCCTGGTATCAAACTACAAACCT 59.957 41.667 0.00 0.00 0.00 3.50
2342 2436 4.332828 AGCCTGGTATCAAACTACAAACC 58.667 43.478 0.00 0.00 0.00 3.27
2343 2437 5.246307 AGAGCCTGGTATCAAACTACAAAC 58.754 41.667 0.00 0.00 0.00 2.93
2344 2438 5.499004 AGAGCCTGGTATCAAACTACAAA 57.501 39.130 0.00 0.00 0.00 2.83
2345 2439 5.499004 AAGAGCCTGGTATCAAACTACAA 57.501 39.130 0.00 0.00 0.00 2.41
2346 2440 5.221843 ACAAAGAGCCTGGTATCAAACTACA 60.222 40.000 0.00 0.00 0.00 2.74
2347 2441 5.122396 CACAAAGAGCCTGGTATCAAACTAC 59.878 44.000 0.00 0.00 0.00 2.73
2348 2442 5.245531 CACAAAGAGCCTGGTATCAAACTA 58.754 41.667 0.00 0.00 0.00 2.24
2349 2443 4.074970 CACAAAGAGCCTGGTATCAAACT 58.925 43.478 0.00 0.00 0.00 2.66
2350 2444 3.366374 GCACAAAGAGCCTGGTATCAAAC 60.366 47.826 0.00 0.00 0.00 2.93
2351 2445 2.819608 GCACAAAGAGCCTGGTATCAAA 59.180 45.455 0.00 0.00 0.00 2.69
2352 2446 2.224744 TGCACAAAGAGCCTGGTATCAA 60.225 45.455 0.00 0.00 0.00 2.57
2353 2447 1.350684 TGCACAAAGAGCCTGGTATCA 59.649 47.619 0.00 0.00 0.00 2.15
2354 2448 2.012673 CTGCACAAAGAGCCTGGTATC 58.987 52.381 0.00 0.00 0.00 2.24
2355 2449 1.630369 TCTGCACAAAGAGCCTGGTAT 59.370 47.619 0.00 0.00 0.00 2.73
2356 2450 1.055849 TCTGCACAAAGAGCCTGGTA 58.944 50.000 0.00 0.00 0.00 3.25
2357 2451 0.183492 TTCTGCACAAAGAGCCTGGT 59.817 50.000 0.00 0.00 0.00 4.00
2358 2452 1.321474 TTTCTGCACAAAGAGCCTGG 58.679 50.000 0.00 0.00 0.00 4.45
2359 2453 2.818432 AGATTTCTGCACAAAGAGCCTG 59.182 45.455 0.00 0.00 0.00 4.85
2360 2454 3.151912 AGATTTCTGCACAAAGAGCCT 57.848 42.857 0.00 0.00 0.00 4.58
2361 2455 3.930634 AAGATTTCTGCACAAAGAGCC 57.069 42.857 0.00 0.00 0.00 4.70
2362 2456 5.855395 CAGTAAAGATTTCTGCACAAAGAGC 59.145 40.000 0.00 0.00 0.00 4.09
2363 2457 6.963796 ACAGTAAAGATTTCTGCACAAAGAG 58.036 36.000 0.00 0.00 33.12 2.85
2364 2458 6.942532 ACAGTAAAGATTTCTGCACAAAGA 57.057 33.333 0.00 0.00 33.12 2.52
2365 2459 6.418819 CCAACAGTAAAGATTTCTGCACAAAG 59.581 38.462 0.00 0.00 33.12 2.77
2366 2460 6.127479 ACCAACAGTAAAGATTTCTGCACAAA 60.127 34.615 0.00 0.00 33.12 2.83
2367 2461 5.359576 ACCAACAGTAAAGATTTCTGCACAA 59.640 36.000 0.00 0.00 33.12 3.33
2368 2462 4.887071 ACCAACAGTAAAGATTTCTGCACA 59.113 37.500 0.00 0.00 33.12 4.57
2369 2463 5.438761 ACCAACAGTAAAGATTTCTGCAC 57.561 39.130 0.00 0.00 33.12 4.57
2370 2464 7.759489 ATTACCAACAGTAAAGATTTCTGCA 57.241 32.000 0.00 0.00 44.04 4.41
2371 2465 8.915654 CAAATTACCAACAGTAAAGATTTCTGC 58.084 33.333 0.00 0.00 44.04 4.26
2383 2477 9.131791 ACTACAGAAATTCAAATTACCAACAGT 57.868 29.630 0.00 0.00 0.00 3.55
2384 2478 9.965824 AACTACAGAAATTCAAATTACCAACAG 57.034 29.630 0.00 0.00 0.00 3.16


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.