Multiple sequence alignment - TraesCS6A01G416400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G416400 chr6A 100.000 3796 0 0 1 3796 615465213 615461418 0.000000e+00 7011
1 TraesCS6A01G416400 chr6B 91.413 2492 105 52 629 3058 720500557 720503001 0.000000e+00 3315
2 TraesCS6A01G416400 chr6B 95.652 437 12 4 1 430 720499718 720500154 0.000000e+00 695
3 TraesCS6A01G416400 chr6B 96.311 244 8 1 419 662 720500315 720500557 2.120000e-107 399
4 TraesCS6A01G416400 chr6D 95.264 1457 50 7 251 1705 470635625 470634186 0.000000e+00 2290
5 TraesCS6A01G416400 chr6D 93.591 1373 53 13 1701 3058 470634031 470632679 0.000000e+00 2015
6 TraesCS6A01G416400 chr6D 92.857 210 9 3 50 253 470635915 470635706 2.220000e-77 300
7 TraesCS6A01G416400 chr6D 100.000 53 0 0 1 53 470636059 470636007 8.680000e-17 99
8 TraesCS6A01G416400 chr7A 87.032 401 35 8 3234 3630 674358482 674358095 1.620000e-118 436
9 TraesCS6A01G416400 chr7A 87.032 401 35 8 3234 3630 674407063 674406676 1.620000e-118 436
10 TraesCS6A01G416400 chr7A 82.963 405 49 11 3231 3630 15004316 15004705 7.800000e-92 348
11 TraesCS6A01G416400 chr7A 81.716 268 33 7 3230 3495 344753804 344753551 3.840000e-50 209
12 TraesCS6A01G416400 chr5D 86.616 396 34 14 3227 3617 553466506 553466125 1.630000e-113 420
13 TraesCS6A01G416400 chr2D 85.222 406 44 9 3231 3633 18624257 18624649 1.640000e-108 403
14 TraesCS6A01G416400 chr2D 85.432 405 36 12 3233 3630 650965208 650965596 2.120000e-107 399
15 TraesCS6A01G416400 chr1A 86.022 372 34 8 3247 3614 49349750 49350107 2.140000e-102 383
16 TraesCS6A01G416400 chr1A 84.817 382 38 9 3234 3611 423989265 423989630 2.150000e-97 366
17 TraesCS6A01G416400 chr4B 86.723 354 28 10 3282 3631 450912553 450912891 3.580000e-100 375
18 TraesCS6A01G416400 chr2A 81.223 229 34 4 3230 3455 566587204 566587426 3.900000e-40 176
19 TraesCS6A01G416400 chr5A 85.057 174 10 6 2275 2437 487743651 487743483 3.030000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G416400 chr6A 615461418 615465213 3795 True 7011.000000 7011 100.000000 1 3796 1 chr6A.!!$R1 3795
1 TraesCS6A01G416400 chr6B 720499718 720503001 3283 False 1469.666667 3315 94.458667 1 3058 3 chr6B.!!$F1 3057
2 TraesCS6A01G416400 chr6D 470632679 470636059 3380 True 1176.000000 2290 95.428000 1 3058 4 chr6D.!!$R1 3057

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
972 1362 1.208870 CTCCCGAGATCGATGAGCG 59.791 63.158 0.54 3.24 43.02 5.03 F
1302 1701 0.161658 CACAGTTCGTGCGTGATCAC 59.838 55.000 16.21 16.21 39.19 3.06 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2126 2700 0.560688 ACCCCAAGAAAAGGAGGCAA 59.439 50.0 0.0 0.0 0.00 4.52 R
3203 3825 0.102844 CCCACACAAGGTTGTTGCAG 59.897 55.0 0.0 0.0 39.91 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 151 9.750125 TCATGTTACAAGATGTGTGATACTATC 57.250 33.333 0.00 0.00 41.89 2.08
182 284 3.640967 AGGATATCCTGAGAACTGTCAGC 59.359 47.826 23.95 0.00 46.55 4.26
195 297 1.373497 GTCAGCCTGTCACCACTCG 60.373 63.158 0.00 0.00 0.00 4.18
197 299 2.919856 AGCCTGTCACCACTCGCT 60.920 61.111 0.00 0.00 0.00 4.93
198 300 2.740055 GCCTGTCACCACTCGCTG 60.740 66.667 0.00 0.00 0.00 5.18
209 311 1.550065 CACTCGCTGTAGATGAACCG 58.450 55.000 0.00 0.00 0.00 4.44
230 332 3.745975 CGTGTTTAATGAGGCTTGTCTGA 59.254 43.478 0.00 0.00 0.00 3.27
484 841 6.818142 GTCAACCCATTAAATCTTTTGGATGG 59.182 38.462 0.00 0.00 34.45 3.51
566 923 6.758254 TGTCTGATGAAAGATGTGTCTTGTA 58.242 36.000 0.00 0.00 43.80 2.41
590 947 2.548920 GCAGGCAGTGTAGTCTGAGTTT 60.549 50.000 0.00 0.00 43.82 2.66
813 1203 2.295349 CCAGAAGCAACAGCTGAATTGT 59.705 45.455 23.35 4.83 38.93 2.71
959 1349 1.234821 TAAAAGTTGTGCAGCTCCCG 58.765 50.000 0.00 0.00 0.00 5.14
972 1362 1.208870 CTCCCGAGATCGATGAGCG 59.791 63.158 0.54 3.24 43.02 5.03
1204 1598 2.614057 GTTCAATATTGGAGCAGGGTCG 59.386 50.000 15.36 0.00 0.00 4.79
1302 1701 0.161658 CACAGTTCGTGCGTGATCAC 59.838 55.000 16.21 16.21 39.19 3.06
1305 1704 1.260297 CAGTTCGTGCGTGATCACAAA 59.740 47.619 24.93 9.86 36.80 2.83
1407 1807 1.481056 GCTGTGGCCGGGGTAGATAT 61.481 60.000 2.18 0.00 0.00 1.63
1408 1808 1.933021 CTGTGGCCGGGGTAGATATA 58.067 55.000 2.18 0.00 0.00 0.86
1409 1809 2.467880 CTGTGGCCGGGGTAGATATAT 58.532 52.381 2.18 0.00 0.00 0.86
1410 1810 2.168521 CTGTGGCCGGGGTAGATATATG 59.831 54.545 2.18 0.00 0.00 1.78
1411 1811 2.225420 TGTGGCCGGGGTAGATATATGA 60.225 50.000 2.18 0.00 0.00 2.15
1412 1812 3.039011 GTGGCCGGGGTAGATATATGAT 58.961 50.000 2.18 0.00 0.00 2.45
1413 1813 3.038280 TGGCCGGGGTAGATATATGATG 58.962 50.000 2.18 0.00 0.00 3.07
1414 1814 2.224305 GGCCGGGGTAGATATATGATGC 60.224 54.545 2.18 0.00 0.00 3.91
1415 1815 2.434336 GCCGGGGTAGATATATGATGCA 59.566 50.000 2.18 0.00 0.00 3.96
1416 1816 3.741388 GCCGGGGTAGATATATGATGCAC 60.741 52.174 2.18 0.00 0.00 4.57
1417 1817 3.450817 CCGGGGTAGATATATGATGCACA 59.549 47.826 0.00 0.00 0.00 4.57
1418 1818 4.081142 CCGGGGTAGATATATGATGCACAA 60.081 45.833 0.00 0.00 0.00 3.33
1424 1824 7.094634 GGGTAGATATATGATGCACAAACCTTG 60.095 40.741 0.00 0.00 0.00 3.61
1432 1832 5.830912 TGATGCACAAACCTTGTCTTAAAG 58.169 37.500 0.00 0.00 43.23 1.85
1475 1875 1.533625 TTTCAGCGCCTTACATTGCT 58.466 45.000 2.29 0.00 38.43 3.91
1503 1903 2.437359 CTTCCTTGCTCGGCCTGG 60.437 66.667 0.00 0.00 0.00 4.45
1507 1907 3.121030 CTTGCTCGGCCTGGAACG 61.121 66.667 0.00 0.63 0.00 3.95
1634 2039 1.526887 CAACCAACTAGCGCGATATGG 59.473 52.381 19.57 19.57 0.00 2.74
1718 2285 7.888021 CAGTATACTAGTCAGGATCTGGATCTT 59.112 40.741 4.74 0.38 37.92 2.40
1737 2304 7.121168 TGGATCTTGTTTAGGTTTGAGCATAAG 59.879 37.037 0.00 0.00 0.00 1.73
2096 2670 6.264067 GGATTTGGTTAGATCTCATCCCTTTG 59.736 42.308 0.00 0.00 0.00 2.77
2097 2671 5.779241 TTGGTTAGATCTCATCCCTTTGT 57.221 39.130 0.00 0.00 0.00 2.83
2125 2699 4.878971 TCTTGCTGTACTTTGTACTTTGCA 59.121 37.500 8.94 12.04 0.00 4.08
2126 2700 5.530915 TCTTGCTGTACTTTGTACTTTGCAT 59.469 36.000 16.75 0.00 0.00 3.96
2127 2701 5.766150 TGCTGTACTTTGTACTTTGCATT 57.234 34.783 8.94 0.00 0.00 3.56
2128 2702 5.518812 TGCTGTACTTTGTACTTTGCATTG 58.481 37.500 8.94 0.00 0.00 2.82
2129 2703 4.382754 GCTGTACTTTGTACTTTGCATTGC 59.617 41.667 0.46 0.46 0.00 3.56
2266 2851 3.005684 TCAACCAAATCAACAGGCATCAC 59.994 43.478 0.00 0.00 0.00 3.06
2352 2940 4.681978 GCCGTGGACGACAGCCTT 62.682 66.667 0.00 0.00 43.02 4.35
2438 3031 4.034858 CCATTCCATGACTGAATCTGAACG 59.965 45.833 0.00 0.00 30.16 3.95
2679 3282 2.678934 CGTCGGAGAACTCCCCCA 60.679 66.667 14.25 0.00 46.96 4.96
2764 3367 4.504916 CGTCTCCCGCCTCTGCAG 62.505 72.222 7.63 7.63 37.32 4.41
2808 3411 2.652530 GGTAGCAACGGTCGGTCA 59.347 61.111 0.00 0.00 0.00 4.02
2809 3412 1.735559 GGTAGCAACGGTCGGTCAC 60.736 63.158 0.00 0.00 0.00 3.67
2810 3413 2.084681 GTAGCAACGGTCGGTCACG 61.085 63.158 0.00 0.00 42.74 4.35
2811 3414 3.271706 TAGCAACGGTCGGTCACGG 62.272 63.158 0.00 0.00 41.39 4.94
2866 3469 3.129871 GTCTGCTAGCTTGCTAATCCAG 58.870 50.000 20.64 8.89 0.00 3.86
2877 3481 1.723288 CTAATCCAGTCCTCCTCCCC 58.277 60.000 0.00 0.00 0.00 4.81
2923 3531 4.318332 AGATAATCCCATGTACATGCGTG 58.682 43.478 27.27 17.95 37.49 5.34
2924 3532 2.708216 AATCCCATGTACATGCGTGA 57.292 45.000 27.27 21.81 37.49 4.35
2925 3533 2.936919 ATCCCATGTACATGCGTGAT 57.063 45.000 27.27 22.81 37.49 3.06
2926 3534 1.952193 TCCCATGTACATGCGTGATG 58.048 50.000 27.27 13.98 37.49 3.07
2927 3535 0.308684 CCCATGTACATGCGTGATGC 59.691 55.000 27.27 2.67 46.70 3.91
2939 3555 1.081906 GTGATGCGTGTGCTGGTTG 60.082 57.895 0.00 0.00 43.34 3.77
2976 3592 5.687166 AACTGAATGAATTCCATGGCAAT 57.313 34.783 6.96 5.24 35.24 3.56
3021 3643 6.134535 ACTTACCAAGGTATGAAATCCACA 57.865 37.500 16.38 0.00 32.33 4.17
3027 3649 7.182060 ACCAAGGTATGAAATCCACAACTAAT 58.818 34.615 0.00 0.00 0.00 1.73
3028 3650 7.122650 ACCAAGGTATGAAATCCACAACTAATG 59.877 37.037 0.00 0.00 0.00 1.90
3045 3667 5.061179 ACTAATGGTGAAACAGTAAAGCGT 58.939 37.500 0.00 0.00 39.98 5.07
3046 3668 4.911514 AATGGTGAAACAGTAAAGCGTT 57.088 36.364 0.00 0.00 39.98 4.84
3053 3675 2.554370 ACAGTAAAGCGTTAGGCCAA 57.446 45.000 5.01 0.00 45.17 4.52
3058 3680 2.723124 AAAGCGTTAGGCCAACAATG 57.277 45.000 5.01 2.32 45.17 2.82
3130 3752 8.538409 AAAATAAATCTGGTTGAGCAATTGAC 57.462 30.769 10.34 2.82 0.00 3.18
3131 3753 3.837213 AATCTGGTTGAGCAATTGACG 57.163 42.857 10.34 0.00 0.00 4.35
3132 3754 2.542020 TCTGGTTGAGCAATTGACGA 57.458 45.000 10.34 0.00 0.00 4.20
3133 3755 3.057969 TCTGGTTGAGCAATTGACGAT 57.942 42.857 10.34 0.00 0.00 3.73
3134 3756 3.411446 TCTGGTTGAGCAATTGACGATT 58.589 40.909 10.34 0.00 0.00 3.34
3135 3757 3.820467 TCTGGTTGAGCAATTGACGATTT 59.180 39.130 10.34 0.00 0.00 2.17
3136 3758 5.000591 TCTGGTTGAGCAATTGACGATTTA 58.999 37.500 10.34 0.00 0.00 1.40
3137 3759 5.647658 TCTGGTTGAGCAATTGACGATTTAT 59.352 36.000 10.34 0.00 0.00 1.40
3138 3760 5.639757 TGGTTGAGCAATTGACGATTTATG 58.360 37.500 10.34 0.00 0.00 1.90
3139 3761 5.414144 TGGTTGAGCAATTGACGATTTATGA 59.586 36.000 10.34 0.00 0.00 2.15
3140 3762 6.072230 TGGTTGAGCAATTGACGATTTATGAA 60.072 34.615 10.34 0.00 0.00 2.57
3141 3763 6.806249 GGTTGAGCAATTGACGATTTATGAAA 59.194 34.615 10.34 0.00 0.00 2.69
3142 3764 7.201350 GGTTGAGCAATTGACGATTTATGAAAC 60.201 37.037 10.34 0.34 0.00 2.78
3143 3765 7.144722 TGAGCAATTGACGATTTATGAAACT 57.855 32.000 10.34 0.00 0.00 2.66
3144 3766 7.592938 TGAGCAATTGACGATTTATGAAACTT 58.407 30.769 10.34 0.00 0.00 2.66
3145 3767 8.081633 TGAGCAATTGACGATTTATGAAACTTT 58.918 29.630 10.34 0.00 0.00 2.66
3146 3768 9.554724 GAGCAATTGACGATTTATGAAACTTTA 57.445 29.630 10.34 0.00 0.00 1.85
3147 3769 9.906660 AGCAATTGACGATTTATGAAACTTTAA 57.093 25.926 10.34 0.00 0.00 1.52
3186 3808 6.790285 AAAAGAAATCACACATGGCATTTC 57.210 33.333 0.00 5.40 36.07 2.17
3187 3809 4.100707 AGAAATCACACATGGCATTTCG 57.899 40.909 0.00 0.00 39.32 3.46
3188 3810 3.758023 AGAAATCACACATGGCATTTCGA 59.242 39.130 0.00 0.00 39.32 3.71
3189 3811 4.400251 AGAAATCACACATGGCATTTCGAT 59.600 37.500 0.00 0.00 39.32 3.59
3190 3812 5.589855 AGAAATCACACATGGCATTTCGATA 59.410 36.000 0.00 0.00 39.32 2.92
3191 3813 6.263842 AGAAATCACACATGGCATTTCGATAT 59.736 34.615 0.00 0.00 39.32 1.63
3192 3814 6.395426 AATCACACATGGCATTTCGATATT 57.605 33.333 0.00 0.00 0.00 1.28
3193 3815 7.509141 AATCACACATGGCATTTCGATATTA 57.491 32.000 0.00 0.00 0.00 0.98
3194 3816 7.692460 ATCACACATGGCATTTCGATATTAT 57.308 32.000 0.00 0.00 0.00 1.28
3195 3817 8.791327 ATCACACATGGCATTTCGATATTATA 57.209 30.769 0.00 0.00 0.00 0.98
3196 3818 8.791327 TCACACATGGCATTTCGATATTATAT 57.209 30.769 0.00 0.00 0.00 0.86
3197 3819 9.230122 TCACACATGGCATTTCGATATTATATT 57.770 29.630 0.00 0.00 0.00 1.28
3216 3838 6.949352 ATATTATCCTCTGCAACAACCTTG 57.051 37.500 0.00 0.00 0.00 3.61
3217 3839 2.664402 ATCCTCTGCAACAACCTTGT 57.336 45.000 0.00 0.00 44.72 3.16
3218 3840 1.679139 TCCTCTGCAACAACCTTGTG 58.321 50.000 0.00 0.00 41.31 3.33
3219 3841 1.064758 TCCTCTGCAACAACCTTGTGT 60.065 47.619 0.00 0.00 41.31 3.72
3220 3842 1.066002 CCTCTGCAACAACCTTGTGTG 59.934 52.381 0.00 0.00 41.31 3.82
3221 3843 1.066002 CTCTGCAACAACCTTGTGTGG 59.934 52.381 0.00 0.00 41.31 4.17
3222 3844 0.102844 CTGCAACAACCTTGTGTGGG 59.897 55.000 0.00 0.00 41.31 4.61
3223 3845 0.613292 TGCAACAACCTTGTGTGGGT 60.613 50.000 0.00 0.00 41.31 4.51
3226 3848 3.854856 CAACCTTGTGTGGGTGGG 58.145 61.111 0.00 0.00 40.95 4.61
3227 3849 2.123468 AACCTTGTGTGGGTGGGC 60.123 61.111 0.00 0.00 37.13 5.36
3228 3850 3.002620 AACCTTGTGTGGGTGGGCA 62.003 57.895 0.00 0.00 37.13 5.36
3229 3851 2.118076 CCTTGTGTGGGTGGGCAT 59.882 61.111 0.00 0.00 0.00 4.40
3230 3852 1.978617 CCTTGTGTGGGTGGGCATC 60.979 63.158 0.00 0.00 0.00 3.91
3231 3853 2.282110 TTGTGTGGGTGGGCATCG 60.282 61.111 0.00 0.00 0.00 3.84
3232 3854 3.859118 TTGTGTGGGTGGGCATCGG 62.859 63.158 0.00 0.00 0.00 4.18
3233 3855 4.028490 GTGTGGGTGGGCATCGGA 62.028 66.667 0.00 0.00 0.00 4.55
3234 3856 3.253061 TGTGGGTGGGCATCGGAA 61.253 61.111 0.00 0.00 0.00 4.30
3235 3857 2.034999 GTGGGTGGGCATCGGAAA 59.965 61.111 0.00 0.00 0.00 3.13
3236 3858 1.379843 GTGGGTGGGCATCGGAAAT 60.380 57.895 0.00 0.00 0.00 2.17
3237 3859 1.077068 TGGGTGGGCATCGGAAATC 60.077 57.895 0.00 0.00 0.00 2.17
3238 3860 1.828224 GGGTGGGCATCGGAAATCC 60.828 63.158 0.00 0.00 0.00 3.01
3249 3871 2.180674 GGAAATCCGTTGGTGCTCC 58.819 57.895 0.00 0.00 0.00 4.70
3250 3872 1.313091 GGAAATCCGTTGGTGCTCCC 61.313 60.000 1.59 0.00 0.00 4.30
3251 3873 1.644786 GAAATCCGTTGGTGCTCCCG 61.645 60.000 1.59 0.00 35.15 5.14
3252 3874 3.622060 AATCCGTTGGTGCTCCCGG 62.622 63.158 14.22 14.22 39.02 5.73
3255 3877 4.760047 CGTTGGTGCTCCCGGGAG 62.760 72.222 41.29 41.29 44.56 4.30
3327 3949 8.238481 CAAACAAAAATTTGGCGTATACATCT 57.762 30.769 10.38 0.00 42.34 2.90
3328 3950 8.372521 CAAACAAAAATTTGGCGTATACATCTC 58.627 33.333 10.38 0.00 42.34 2.75
3329 3951 6.255215 ACAAAAATTTGGCGTATACATCTCG 58.745 36.000 10.38 0.00 42.34 4.04
3330 3952 6.092944 ACAAAAATTTGGCGTATACATCTCGA 59.907 34.615 10.38 0.00 42.34 4.04
3331 3953 5.652744 AAATTTGGCGTATACATCTCGAC 57.347 39.130 3.32 0.00 0.00 4.20
3332 3954 3.786516 TTTGGCGTATACATCTCGACA 57.213 42.857 3.32 0.00 40.90 4.35
3333 3955 4.316205 TTTGGCGTATACATCTCGACAT 57.684 40.909 3.32 0.00 42.16 3.06
3334 3956 4.316205 TTGGCGTATACATCTCGACATT 57.684 40.909 3.32 0.00 42.16 2.71
3335 3957 5.441709 TTGGCGTATACATCTCGACATTA 57.558 39.130 3.32 0.00 42.16 1.90
3336 3958 5.638596 TGGCGTATACATCTCGACATTAT 57.361 39.130 3.32 0.00 37.69 1.28
3337 3959 6.746745 TGGCGTATACATCTCGACATTATA 57.253 37.500 3.32 0.00 37.69 0.98
3338 3960 7.329588 TGGCGTATACATCTCGACATTATAT 57.670 36.000 3.32 0.00 37.69 0.86
3339 3961 7.193595 TGGCGTATACATCTCGACATTATATG 58.806 38.462 3.32 0.00 37.69 1.78
3357 3979 9.750882 CATTATATGTCTGCATATCAAGTTTCG 57.249 33.333 3.69 0.00 44.59 3.46
3358 3980 6.791887 ATATGTCTGCATATCAAGTTTCGG 57.208 37.500 0.00 0.00 42.83 4.30
3359 3981 4.200838 TGTCTGCATATCAAGTTTCGGA 57.799 40.909 0.00 0.00 0.00 4.55
3360 3982 4.183865 TGTCTGCATATCAAGTTTCGGAG 58.816 43.478 0.00 0.00 0.00 4.63
3361 3983 4.081697 TGTCTGCATATCAAGTTTCGGAGA 60.082 41.667 0.00 0.00 0.00 3.71
3362 3984 4.870426 GTCTGCATATCAAGTTTCGGAGAA 59.130 41.667 0.00 0.00 45.90 2.87
3363 3985 5.351465 GTCTGCATATCAAGTTTCGGAGAAA 59.649 40.000 0.00 0.00 45.90 2.52
3364 3986 5.937540 TCTGCATATCAAGTTTCGGAGAAAA 59.062 36.000 0.00 0.00 45.90 2.29
3365 3987 5.938322 TGCATATCAAGTTTCGGAGAAAAC 58.062 37.500 0.00 0.00 45.90 2.43
3366 3988 5.106317 TGCATATCAAGTTTCGGAGAAAACC 60.106 40.000 0.00 0.00 45.90 3.27
3416 4038 5.757850 GACAAAAGGATGTCTTGTCTTGT 57.242 39.130 6.87 0.00 44.98 3.16
3417 4039 5.505173 ACAAAAGGATGTCTTGTCTTGTG 57.495 39.130 0.00 0.00 35.55 3.33
3418 4040 5.192927 ACAAAAGGATGTCTTGTCTTGTGA 58.807 37.500 0.00 0.00 35.55 3.58
3419 4041 5.652014 ACAAAAGGATGTCTTGTCTTGTGAA 59.348 36.000 0.00 0.00 35.55 3.18
3420 4042 6.152661 ACAAAAGGATGTCTTGTCTTGTGAAA 59.847 34.615 0.00 0.00 35.55 2.69
3421 4043 6.773976 AAAGGATGTCTTGTCTTGTGAAAA 57.226 33.333 0.00 0.00 35.55 2.29
3422 4044 6.382869 AAGGATGTCTTGTCTTGTGAAAAG 57.617 37.500 0.00 0.00 38.56 2.27
3423 4045 4.276926 AGGATGTCTTGTCTTGTGAAAAGC 59.723 41.667 0.00 0.00 37.43 3.51
3424 4046 4.036734 GGATGTCTTGTCTTGTGAAAAGCA 59.963 41.667 0.00 0.00 37.43 3.91
3425 4047 5.278660 GGATGTCTTGTCTTGTGAAAAGCAT 60.279 40.000 0.00 0.00 37.43 3.79
3426 4048 5.581126 TGTCTTGTCTTGTGAAAAGCATT 57.419 34.783 0.00 0.00 37.43 3.56
3427 4049 5.964758 TGTCTTGTCTTGTGAAAAGCATTT 58.035 33.333 0.00 0.00 42.41 2.32
3446 4068 8.962884 AGCATTTTTAAAACCAGATTTTGTCT 57.037 26.923 0.00 0.00 40.80 3.41
3447 4069 9.394767 AGCATTTTTAAAACCAGATTTTGTCTT 57.605 25.926 0.00 0.00 40.80 3.01
3448 4070 9.650371 GCATTTTTAAAACCAGATTTTGTCTTC 57.350 29.630 0.00 0.00 40.80 2.87
3453 4075 9.581099 TTTAAAACCAGATTTTGTCTTCTTCAC 57.419 29.630 0.00 0.00 40.80 3.18
3454 4076 6.773976 AAACCAGATTTTGTCTTCTTCACA 57.226 33.333 0.00 0.00 34.00 3.58
3455 4077 6.382869 AACCAGATTTTGTCTTCTTCACAG 57.617 37.500 0.00 0.00 34.00 3.66
3456 4078 4.823989 ACCAGATTTTGTCTTCTTCACAGG 59.176 41.667 0.00 0.00 34.00 4.00
3457 4079 4.823989 CCAGATTTTGTCTTCTTCACAGGT 59.176 41.667 0.00 0.00 34.00 4.00
3458 4080 5.278169 CCAGATTTTGTCTTCTTCACAGGTG 60.278 44.000 0.00 0.00 34.00 4.00
3459 4081 5.528690 CAGATTTTGTCTTCTTCACAGGTGA 59.471 40.000 0.00 0.00 34.00 4.02
3460 4082 5.762218 AGATTTTGTCTTCTTCACAGGTGAG 59.238 40.000 2.01 0.00 35.73 3.51
3461 4083 4.753516 TTTGTCTTCTTCACAGGTGAGA 57.246 40.909 2.01 0.68 41.13 3.27
3462 4084 3.735237 TGTCTTCTTCACAGGTGAGAC 57.265 47.619 10.77 10.77 41.13 3.36
3463 4085 2.034685 TGTCTTCTTCACAGGTGAGACG 59.965 50.000 12.14 6.89 41.13 4.18
3464 4086 1.000163 TCTTCTTCACAGGTGAGACGC 60.000 52.381 2.01 0.00 41.13 5.19
3465 4087 0.318699 TTCTTCACAGGTGAGACGCG 60.319 55.000 3.53 3.53 41.13 6.01
3466 4088 1.170290 TCTTCACAGGTGAGACGCGA 61.170 55.000 15.93 0.00 41.13 5.87
3467 4089 1.004277 CTTCACAGGTGAGACGCGAC 61.004 60.000 15.93 6.86 41.13 5.19
3468 4090 1.730451 TTCACAGGTGAGACGCGACA 61.730 55.000 15.93 7.26 41.13 4.35
3469 4091 2.016704 CACAGGTGAGACGCGACAC 61.017 63.158 15.93 18.94 36.44 3.67
3470 4092 2.335011 CAGGTGAGACGCGACACA 59.665 61.111 25.78 17.97 38.57 3.72
3471 4093 1.080501 CAGGTGAGACGCGACACAT 60.081 57.895 25.78 20.44 38.57 3.21
3472 4094 0.170339 CAGGTGAGACGCGACACATA 59.830 55.000 25.78 4.67 38.57 2.29
3473 4095 0.885879 AGGTGAGACGCGACACATAA 59.114 50.000 25.78 0.61 38.57 1.90
3474 4096 1.135373 AGGTGAGACGCGACACATAAG 60.135 52.381 25.78 0.00 38.57 1.73
3475 4097 1.402456 GGTGAGACGCGACACATAAGT 60.402 52.381 25.78 1.87 38.57 2.24
3476 4098 2.325761 GTGAGACGCGACACATAAGTT 58.674 47.619 15.93 0.00 37.05 2.66
3477 4099 2.090658 GTGAGACGCGACACATAAGTTG 59.909 50.000 15.93 0.00 37.05 3.16
3478 4100 2.287970 TGAGACGCGACACATAAGTTGT 60.288 45.455 15.93 0.00 39.91 3.32
3479 4101 2.325761 AGACGCGACACATAAGTTGTC 58.674 47.619 15.93 0.00 36.00 3.18
3488 4110 5.812652 GACACATAAGTTGTCGGTTTTTCA 58.187 37.500 0.00 0.00 36.00 2.69
3489 4111 5.575019 ACACATAAGTTGTCGGTTTTTCAC 58.425 37.500 0.00 0.00 36.00 3.18
3490 4112 4.668837 CACATAAGTTGTCGGTTTTTCACG 59.331 41.667 0.00 0.00 36.00 4.35
3491 4113 4.571580 ACATAAGTTGTCGGTTTTTCACGA 59.428 37.500 0.00 0.00 30.89 4.35
3492 4114 5.064962 ACATAAGTTGTCGGTTTTTCACGAA 59.935 36.000 0.00 0.00 41.17 3.85
3493 4115 4.422546 AAGTTGTCGGTTTTTCACGAAA 57.577 36.364 0.00 0.00 41.17 3.46
3494 4116 3.750512 AGTTGTCGGTTTTTCACGAAAC 58.249 40.909 0.00 0.00 41.17 2.78
3495 4117 2.438933 TGTCGGTTTTTCACGAAACG 57.561 45.000 0.00 0.00 41.17 3.60
3496 4118 1.998315 TGTCGGTTTTTCACGAAACGA 59.002 42.857 0.00 0.00 41.17 3.85
3497 4119 2.222774 TGTCGGTTTTTCACGAAACGAC 60.223 45.455 17.52 17.52 41.17 4.34
3498 4120 2.029606 GTCGGTTTTTCACGAAACGACT 59.970 45.455 17.20 0.00 41.17 4.18
3499 4121 2.672381 TCGGTTTTTCACGAAACGACTT 59.328 40.909 0.00 0.00 39.76 3.01
3500 4122 3.124976 TCGGTTTTTCACGAAACGACTTT 59.875 39.130 0.00 0.00 39.76 2.66
3501 4123 3.847457 CGGTTTTTCACGAAACGACTTTT 59.153 39.130 0.00 0.00 39.76 2.27
3502 4124 4.258704 CGGTTTTTCACGAAACGACTTTTG 60.259 41.667 0.00 0.00 39.76 2.44
3503 4125 4.618067 GGTTTTTCACGAAACGACTTTTGT 59.382 37.500 0.00 0.00 39.76 2.83
3504 4126 5.442260 GGTTTTTCACGAAACGACTTTTGTG 60.442 40.000 11.02 11.02 46.93 3.33
3507 4129 2.732001 ACGAAACGACTTTTGTGAGC 57.268 45.000 0.00 0.00 33.35 4.26
3508 4130 2.004017 ACGAAACGACTTTTGTGAGCA 58.996 42.857 0.00 0.00 33.35 4.26
3509 4131 2.612212 ACGAAACGACTTTTGTGAGCAT 59.388 40.909 0.00 0.00 33.35 3.79
3510 4132 2.966708 CGAAACGACTTTTGTGAGCATG 59.033 45.455 0.00 0.00 0.00 4.06
3511 4133 3.546020 CGAAACGACTTTTGTGAGCATGT 60.546 43.478 0.00 0.00 0.00 3.21
3512 4134 4.318475 CGAAACGACTTTTGTGAGCATGTA 60.318 41.667 0.00 0.00 0.00 2.29
3513 4135 4.468095 AACGACTTTTGTGAGCATGTAC 57.532 40.909 0.00 0.00 0.00 2.90
3514 4136 3.462982 ACGACTTTTGTGAGCATGTACA 58.537 40.909 0.00 0.00 0.00 2.90
3515 4137 3.874543 ACGACTTTTGTGAGCATGTACAA 59.125 39.130 0.00 7.82 35.20 2.41
3516 4138 4.515191 ACGACTTTTGTGAGCATGTACAAT 59.485 37.500 0.00 0.00 36.75 2.71
3517 4139 5.699001 ACGACTTTTGTGAGCATGTACAATA 59.301 36.000 0.00 7.47 36.75 1.90
3518 4140 6.371548 ACGACTTTTGTGAGCATGTACAATAT 59.628 34.615 0.00 0.00 36.75 1.28
3519 4141 6.901887 CGACTTTTGTGAGCATGTACAATATC 59.098 38.462 0.00 0.00 36.75 1.63
3520 4142 6.775088 ACTTTTGTGAGCATGTACAATATCG 58.225 36.000 0.00 0.00 36.75 2.92
3521 4143 6.593770 ACTTTTGTGAGCATGTACAATATCGA 59.406 34.615 0.00 0.00 36.75 3.59
3522 4144 6.588348 TTTGTGAGCATGTACAATATCGAG 57.412 37.500 0.00 0.00 36.75 4.04
3523 4145 5.514274 TGTGAGCATGTACAATATCGAGA 57.486 39.130 0.00 0.00 0.00 4.04
3524 4146 6.089249 TGTGAGCATGTACAATATCGAGAT 57.911 37.500 0.00 0.00 0.00 2.75
3525 4147 7.214467 TGTGAGCATGTACAATATCGAGATA 57.786 36.000 0.00 0.00 0.00 1.98
3526 4148 7.830739 TGTGAGCATGTACAATATCGAGATAT 58.169 34.615 0.00 0.04 35.63 1.63
3527 4149 8.956426 TGTGAGCATGTACAATATCGAGATATA 58.044 33.333 0.00 0.00 33.86 0.86
3528 4150 9.227490 GTGAGCATGTACAATATCGAGATATAC 57.773 37.037 0.00 0.37 33.86 1.47
3529 4151 8.122952 TGAGCATGTACAATATCGAGATATACG 58.877 37.037 0.00 4.13 33.86 3.06
3530 4152 6.913132 AGCATGTACAATATCGAGATATACGC 59.087 38.462 0.00 0.53 33.86 4.42
3531 4153 6.129691 GCATGTACAATATCGAGATATACGCG 60.130 42.308 3.53 3.53 42.74 6.01
3532 4154 5.260900 TGTACAATATCGAGATATACGCGC 58.739 41.667 5.73 0.00 41.27 6.86
3533 4155 3.692576 ACAATATCGAGATATACGCGCC 58.307 45.455 5.73 0.00 41.27 6.53
3534 4156 3.128068 ACAATATCGAGATATACGCGCCA 59.872 43.478 5.73 0.00 41.27 5.69
3535 4157 4.102649 CAATATCGAGATATACGCGCCAA 58.897 43.478 5.73 0.00 41.27 4.52
3536 4158 2.264109 ATCGAGATATACGCGCCAAG 57.736 50.000 5.73 0.00 41.27 3.61
3537 4159 0.949397 TCGAGATATACGCGCCAAGT 59.051 50.000 5.73 0.00 41.27 3.16
3538 4160 1.335810 TCGAGATATACGCGCCAAGTT 59.664 47.619 5.73 0.00 41.27 2.66
3539 4161 2.124903 CGAGATATACGCGCCAAGTTT 58.875 47.619 5.73 0.00 34.86 2.66
3540 4162 2.538449 CGAGATATACGCGCCAAGTTTT 59.462 45.455 5.73 0.00 34.86 2.43
3541 4163 3.000925 CGAGATATACGCGCCAAGTTTTT 59.999 43.478 5.73 0.00 34.86 1.94
3542 4164 4.271687 GAGATATACGCGCCAAGTTTTTG 58.728 43.478 5.73 0.00 0.00 2.44
3543 4165 3.687698 AGATATACGCGCCAAGTTTTTGT 59.312 39.130 5.73 0.00 32.21 2.83
3544 4166 2.785713 ATACGCGCCAAGTTTTTGTT 57.214 40.000 5.73 0.00 32.21 2.83
3545 4167 2.563471 TACGCGCCAAGTTTTTGTTT 57.437 40.000 5.73 0.00 32.21 2.83
3546 4168 0.995728 ACGCGCCAAGTTTTTGTTTG 59.004 45.000 5.73 0.00 32.21 2.93
3547 4169 0.300193 CGCGCCAAGTTTTTGTTTGG 59.700 50.000 0.00 0.00 45.28 3.28
3548 4170 1.646189 GCGCCAAGTTTTTGTTTGGA 58.354 45.000 7.40 0.00 45.32 3.53
3549 4171 2.003301 GCGCCAAGTTTTTGTTTGGAA 58.997 42.857 7.40 0.00 45.32 3.53
3550 4172 2.611751 GCGCCAAGTTTTTGTTTGGAAT 59.388 40.909 7.40 0.00 45.32 3.01
3551 4173 3.064682 GCGCCAAGTTTTTGTTTGGAATT 59.935 39.130 7.40 0.00 45.32 2.17
3552 4174 4.438065 GCGCCAAGTTTTTGTTTGGAATTT 60.438 37.500 7.40 0.00 45.32 1.82
3553 4175 5.635866 CGCCAAGTTTTTGTTTGGAATTTT 58.364 33.333 7.40 0.00 45.32 1.82
3554 4176 6.089476 CGCCAAGTTTTTGTTTGGAATTTTT 58.911 32.000 7.40 0.00 45.32 1.94
3598 4220 6.918892 AAAACACATTTAAAAACCAGGAGC 57.081 33.333 0.00 0.00 0.00 4.70
3599 4221 5.869649 AACACATTTAAAAACCAGGAGCT 57.130 34.783 0.00 0.00 0.00 4.09
3600 4222 5.453567 ACACATTTAAAAACCAGGAGCTC 57.546 39.130 4.71 4.71 0.00 4.09
3601 4223 4.023193 ACACATTTAAAAACCAGGAGCTCG 60.023 41.667 7.83 0.00 0.00 5.03
3602 4224 3.057526 ACATTTAAAAACCAGGAGCTCGC 60.058 43.478 7.83 0.47 0.00 5.03
3603 4225 1.153353 TTAAAAACCAGGAGCTCGCG 58.847 50.000 7.83 0.00 0.00 5.87
3604 4226 1.296056 TAAAAACCAGGAGCTCGCGC 61.296 55.000 7.83 0.00 0.00 6.86
3613 4235 2.202716 AGCTCGCGCTCTCATGTG 60.203 61.111 5.56 0.00 45.15 3.21
3614 4236 2.507992 GCTCGCGCTCTCATGTGT 60.508 61.111 5.56 0.00 0.00 3.72
3615 4237 2.512301 GCTCGCGCTCTCATGTGTC 61.512 63.158 5.56 0.00 0.00 3.67
3616 4238 1.153958 CTCGCGCTCTCATGTGTCA 60.154 57.895 5.56 0.00 0.00 3.58
3617 4239 1.138636 CTCGCGCTCTCATGTGTCAG 61.139 60.000 5.56 0.00 0.00 3.51
3618 4240 2.796425 CGCGCTCTCATGTGTCAGC 61.796 63.158 5.56 0.00 0.00 4.26
3619 4241 1.739196 GCGCTCTCATGTGTCAGCA 60.739 57.895 0.00 0.00 0.00 4.41
3620 4242 1.964290 GCGCTCTCATGTGTCAGCAC 61.964 60.000 0.00 0.00 45.44 4.40
3629 4251 2.906047 GTGTCAGCACACCACTCTC 58.094 57.895 0.00 0.00 46.49 3.20
3630 4252 0.941463 GTGTCAGCACACCACTCTCG 60.941 60.000 0.00 0.00 46.49 4.04
3631 4253 1.106944 TGTCAGCACACCACTCTCGA 61.107 55.000 0.00 0.00 0.00 4.04
3632 4254 0.032130 GTCAGCACACCACTCTCGAA 59.968 55.000 0.00 0.00 0.00 3.71
3633 4255 0.750249 TCAGCACACCACTCTCGAAA 59.250 50.000 0.00 0.00 0.00 3.46
3634 4256 1.138069 TCAGCACACCACTCTCGAAAA 59.862 47.619 0.00 0.00 0.00 2.29
3635 4257 1.261619 CAGCACACCACTCTCGAAAAC 59.738 52.381 0.00 0.00 0.00 2.43
3636 4258 1.139058 AGCACACCACTCTCGAAAACT 59.861 47.619 0.00 0.00 0.00 2.66
3637 4259 2.364324 AGCACACCACTCTCGAAAACTA 59.636 45.455 0.00 0.00 0.00 2.24
3638 4260 2.731976 GCACACCACTCTCGAAAACTAG 59.268 50.000 0.00 0.00 0.00 2.57
3639 4261 3.799232 GCACACCACTCTCGAAAACTAGT 60.799 47.826 0.00 0.00 0.00 2.57
3640 4262 4.369182 CACACCACTCTCGAAAACTAGTT 58.631 43.478 1.12 1.12 0.00 2.24
3641 4263 4.209288 CACACCACTCTCGAAAACTAGTTG 59.791 45.833 9.34 0.00 0.00 3.16
3642 4264 4.142004 ACACCACTCTCGAAAACTAGTTGT 60.142 41.667 9.34 2.64 0.00 3.32
3643 4265 5.068198 ACACCACTCTCGAAAACTAGTTGTA 59.932 40.000 9.34 0.00 0.00 2.41
3644 4266 6.157211 CACCACTCTCGAAAACTAGTTGTAT 58.843 40.000 9.34 0.00 0.00 2.29
3645 4267 6.645415 CACCACTCTCGAAAACTAGTTGTATT 59.355 38.462 9.34 0.00 0.00 1.89
3646 4268 6.867293 ACCACTCTCGAAAACTAGTTGTATTC 59.133 38.462 9.34 8.54 0.00 1.75
3647 4269 6.866770 CCACTCTCGAAAACTAGTTGTATTCA 59.133 38.462 9.34 0.83 0.00 2.57
3648 4270 7.384115 CCACTCTCGAAAACTAGTTGTATTCAA 59.616 37.037 9.34 0.00 0.00 2.69
3649 4271 8.926710 CACTCTCGAAAACTAGTTGTATTCAAT 58.073 33.333 9.34 0.00 35.92 2.57
3650 4272 9.141400 ACTCTCGAAAACTAGTTGTATTCAATC 57.859 33.333 9.34 0.00 35.92 2.67
3651 4273 8.169839 TCTCGAAAACTAGTTGTATTCAATCG 57.830 34.615 9.34 9.26 35.92 3.34
3652 4274 8.024865 TCTCGAAAACTAGTTGTATTCAATCGA 58.975 33.333 9.34 12.43 35.42 3.59
3653 4275 8.169839 TCGAAAACTAGTTGTATTCAATCGAG 57.830 34.615 9.34 0.00 33.38 4.04
3654 4276 7.274904 TCGAAAACTAGTTGTATTCAATCGAGG 59.725 37.037 9.34 0.00 33.38 4.63
3655 4277 7.274904 CGAAAACTAGTTGTATTCAATCGAGGA 59.725 37.037 9.34 0.00 35.92 3.71
3656 4278 8.842358 AAAACTAGTTGTATTCAATCGAGGAA 57.158 30.769 9.34 4.96 35.92 3.36
3657 4279 7.829378 AACTAGTTGTATTCAATCGAGGAAC 57.171 36.000 7.48 0.00 35.92 3.62
3658 4280 7.171630 ACTAGTTGTATTCAATCGAGGAACT 57.828 36.000 4.62 0.00 37.35 3.01
3659 4281 8.289939 ACTAGTTGTATTCAATCGAGGAACTA 57.710 34.615 4.62 0.00 35.46 2.24
3660 4282 8.746530 ACTAGTTGTATTCAATCGAGGAACTAA 58.253 33.333 4.62 0.00 35.46 2.24
3661 4283 9.239002 CTAGTTGTATTCAATCGAGGAACTAAG 57.761 37.037 4.62 0.00 35.46 2.18
3662 4284 7.612677 AGTTGTATTCAATCGAGGAACTAAGT 58.387 34.615 4.62 2.25 35.46 2.24
3663 4285 8.746530 AGTTGTATTCAATCGAGGAACTAAGTA 58.253 33.333 4.62 0.00 35.46 2.24
3664 4286 9.362539 GTTGTATTCAATCGAGGAACTAAGTAA 57.637 33.333 4.62 0.00 35.46 2.24
3665 4287 9.932207 TTGTATTCAATCGAGGAACTAAGTAAA 57.068 29.630 4.62 0.00 41.55 2.01
3666 4288 9.582431 TGTATTCAATCGAGGAACTAAGTAAAG 57.418 33.333 4.62 0.00 41.55 1.85
3667 4289 9.032420 GTATTCAATCGAGGAACTAAGTAAAGG 57.968 37.037 4.62 0.00 41.55 3.11
3668 4290 6.600882 TCAATCGAGGAACTAAGTAAAGGT 57.399 37.500 0.00 0.00 41.55 3.50
3669 4291 7.001099 TCAATCGAGGAACTAAGTAAAGGTT 57.999 36.000 0.00 0.00 41.55 3.50
3670 4292 6.872020 TCAATCGAGGAACTAAGTAAAGGTTG 59.128 38.462 0.00 0.00 41.55 3.77
3671 4293 5.143376 TCGAGGAACTAAGTAAAGGTTGG 57.857 43.478 0.00 0.00 41.55 3.77
3672 4294 4.590222 TCGAGGAACTAAGTAAAGGTTGGT 59.410 41.667 0.00 0.00 41.55 3.67
3673 4295 5.774690 TCGAGGAACTAAGTAAAGGTTGGTA 59.225 40.000 0.00 0.00 41.55 3.25
3674 4296 6.071728 TCGAGGAACTAAGTAAAGGTTGGTAG 60.072 42.308 0.00 0.00 41.55 3.18
3675 4297 6.294955 CGAGGAACTAAGTAAAGGTTGGTAGT 60.295 42.308 0.00 0.00 41.55 2.73
3676 4298 7.384524 AGGAACTAAGTAAAGGTTGGTAGTT 57.615 36.000 0.00 0.00 36.02 2.24
3677 4299 8.496534 AGGAACTAAGTAAAGGTTGGTAGTTA 57.503 34.615 0.00 0.00 36.02 2.24
3678 4300 8.591940 AGGAACTAAGTAAAGGTTGGTAGTTAG 58.408 37.037 0.00 0.00 38.43 2.34
3679 4301 7.821359 GGAACTAAGTAAAGGTTGGTAGTTAGG 59.179 40.741 9.11 0.00 37.47 2.69
3680 4302 8.496534 AACTAAGTAAAGGTTGGTAGTTAGGA 57.503 34.615 9.11 0.00 37.47 2.94
3681 4303 8.496534 ACTAAGTAAAGGTTGGTAGTTAGGAA 57.503 34.615 9.11 0.00 37.47 3.36
3682 4304 8.370940 ACTAAGTAAAGGTTGGTAGTTAGGAAC 58.629 37.037 9.11 0.00 37.47 3.62
3683 4305 6.752285 AGTAAAGGTTGGTAGTTAGGAACA 57.248 37.500 0.00 0.00 0.00 3.18
3684 4306 7.140522 AGTAAAGGTTGGTAGTTAGGAACAA 57.859 36.000 0.00 0.00 0.00 2.83
3685 4307 7.752638 AGTAAAGGTTGGTAGTTAGGAACAAT 58.247 34.615 0.00 0.00 0.00 2.71
3686 4308 8.883302 AGTAAAGGTTGGTAGTTAGGAACAATA 58.117 33.333 0.00 0.00 0.00 1.90
3687 4309 9.676861 GTAAAGGTTGGTAGTTAGGAACAATAT 57.323 33.333 0.00 0.00 0.00 1.28
3690 4312 9.847224 AAGGTTGGTAGTTAGGAACAATATATG 57.153 33.333 0.00 0.00 0.00 1.78
3691 4313 9.220906 AGGTTGGTAGTTAGGAACAATATATGA 57.779 33.333 0.00 0.00 0.00 2.15
3692 4314 9.269453 GGTTGGTAGTTAGGAACAATATATGAC 57.731 37.037 0.00 0.00 0.00 3.06
3695 4317 9.209048 TGGTAGTTAGGAACAATATATGACTGT 57.791 33.333 0.00 0.00 0.00 3.55
3700 4322 9.654663 GTTAGGAACAATATATGACTGTATCCC 57.345 37.037 10.47 0.00 0.00 3.85
3701 4323 7.872061 AGGAACAATATATGACTGTATCCCA 57.128 36.000 10.47 0.00 0.00 4.37
3702 4324 8.275187 AGGAACAATATATGACTGTATCCCAA 57.725 34.615 10.47 0.00 0.00 4.12
3703 4325 8.378565 AGGAACAATATATGACTGTATCCCAAG 58.621 37.037 10.47 0.00 0.00 3.61
3704 4326 7.119846 GGAACAATATATGACTGTATCCCAAGC 59.880 40.741 0.00 0.00 0.00 4.01
3705 4327 6.476378 ACAATATATGACTGTATCCCAAGCC 58.524 40.000 0.00 0.00 0.00 4.35
3706 4328 6.273260 ACAATATATGACTGTATCCCAAGCCT 59.727 38.462 0.00 0.00 0.00 4.58
3707 4329 7.457852 ACAATATATGACTGTATCCCAAGCCTA 59.542 37.037 0.00 0.00 0.00 3.93
3708 4330 8.321353 CAATATATGACTGTATCCCAAGCCTAA 58.679 37.037 0.00 0.00 0.00 2.69
3709 4331 3.906720 TGACTGTATCCCAAGCCTAAC 57.093 47.619 0.00 0.00 0.00 2.34
3710 4332 2.504175 TGACTGTATCCCAAGCCTAACC 59.496 50.000 0.00 0.00 0.00 2.85
3711 4333 1.844497 ACTGTATCCCAAGCCTAACCC 59.156 52.381 0.00 0.00 0.00 4.11
3712 4334 1.843851 CTGTATCCCAAGCCTAACCCA 59.156 52.381 0.00 0.00 0.00 4.51
3713 4335 2.241176 CTGTATCCCAAGCCTAACCCAA 59.759 50.000 0.00 0.00 0.00 4.12
3714 4336 2.025699 TGTATCCCAAGCCTAACCCAAC 60.026 50.000 0.00 0.00 0.00 3.77
3715 4337 1.080638 ATCCCAAGCCTAACCCAACA 58.919 50.000 0.00 0.00 0.00 3.33
3716 4338 0.854218 TCCCAAGCCTAACCCAACAA 59.146 50.000 0.00 0.00 0.00 2.83
3717 4339 1.203001 TCCCAAGCCTAACCCAACAAG 60.203 52.381 0.00 0.00 0.00 3.16
3718 4340 1.256812 CCAAGCCTAACCCAACAAGG 58.743 55.000 0.00 0.00 37.03 3.61
3736 4358 1.411041 GGGATGAAGCCCTAGTACGT 58.589 55.000 0.00 0.00 45.12 3.57
3737 4359 1.761198 GGGATGAAGCCCTAGTACGTT 59.239 52.381 0.00 0.00 45.12 3.99
3738 4360 2.223994 GGGATGAAGCCCTAGTACGTTC 60.224 54.545 0.00 0.00 45.12 3.95
3739 4361 2.543238 GGATGAAGCCCTAGTACGTTCG 60.543 54.545 0.00 0.00 0.00 3.95
3740 4362 1.825090 TGAAGCCCTAGTACGTTCGA 58.175 50.000 0.00 0.00 0.00 3.71
3741 4363 2.372264 TGAAGCCCTAGTACGTTCGAT 58.628 47.619 0.00 0.00 0.00 3.59
3742 4364 3.544684 TGAAGCCCTAGTACGTTCGATA 58.455 45.455 0.00 0.00 0.00 2.92
3743 4365 3.313526 TGAAGCCCTAGTACGTTCGATAC 59.686 47.826 0.00 0.00 0.00 2.24
3744 4366 2.225467 AGCCCTAGTACGTTCGATACC 58.775 52.381 0.00 0.00 0.00 2.73
3745 4367 1.268079 GCCCTAGTACGTTCGATACCC 59.732 57.143 0.00 0.00 0.00 3.69
3746 4368 1.882623 CCCTAGTACGTTCGATACCCC 59.117 57.143 0.00 0.00 0.00 4.95
3747 4369 1.532868 CCTAGTACGTTCGATACCCCG 59.467 57.143 0.00 0.00 0.00 5.73
3748 4370 0.944386 TAGTACGTTCGATACCCCGC 59.056 55.000 0.00 0.00 0.00 6.13
3749 4371 1.299392 GTACGTTCGATACCCCGCC 60.299 63.158 0.00 0.00 0.00 6.13
3750 4372 1.453745 TACGTTCGATACCCCGCCT 60.454 57.895 0.00 0.00 0.00 5.52
3751 4373 0.179032 TACGTTCGATACCCCGCCTA 60.179 55.000 0.00 0.00 0.00 3.93
3752 4374 0.825010 ACGTTCGATACCCCGCCTAT 60.825 55.000 0.00 0.00 0.00 2.57
3753 4375 0.388134 CGTTCGATACCCCGCCTATG 60.388 60.000 0.00 0.00 0.00 2.23
3754 4376 0.677842 GTTCGATACCCCGCCTATGT 59.322 55.000 0.00 0.00 0.00 2.29
3755 4377 0.963962 TTCGATACCCCGCCTATGTC 59.036 55.000 0.00 0.00 0.00 3.06
3756 4378 1.211969 CGATACCCCGCCTATGTCG 59.788 63.158 0.00 0.00 0.00 4.35
3757 4379 1.239296 CGATACCCCGCCTATGTCGA 61.239 60.000 0.00 0.00 0.00 4.20
3758 4380 0.243095 GATACCCCGCCTATGTCGAC 59.757 60.000 9.11 9.11 0.00 4.20
3759 4381 0.468585 ATACCCCGCCTATGTCGACA 60.469 55.000 22.48 22.48 0.00 4.35
3760 4382 1.105167 TACCCCGCCTATGTCGACAG 61.105 60.000 24.41 11.58 0.00 3.51
3761 4383 2.279517 CCCGCCTATGTCGACAGC 60.280 66.667 24.41 19.80 0.00 4.40
3762 4384 2.655364 CCGCCTATGTCGACAGCG 60.655 66.667 31.84 31.84 46.04 5.18
3771 4393 3.120105 TCGACAGCGAGGCCTATG 58.880 61.111 4.42 8.03 42.51 2.23
3772 4394 2.028190 CGACAGCGAGGCCTATGG 59.972 66.667 4.42 0.00 40.82 2.74
3773 4395 2.786495 CGACAGCGAGGCCTATGGT 61.786 63.158 4.42 3.80 40.82 3.55
3774 4396 1.227380 GACAGCGAGGCCTATGGTG 60.227 63.158 26.67 26.67 37.16 4.17
3775 4397 1.676678 GACAGCGAGGCCTATGGTGA 61.677 60.000 32.09 0.00 35.25 4.02
3776 4398 1.227380 CAGCGAGGCCTATGGTGAC 60.227 63.158 25.10 3.23 33.11 3.67
3777 4399 1.381872 AGCGAGGCCTATGGTGACT 60.382 57.895 4.42 0.00 0.00 3.41
3778 4400 0.978146 AGCGAGGCCTATGGTGACTT 60.978 55.000 4.42 0.00 0.00 3.01
3779 4401 0.107654 GCGAGGCCTATGGTGACTTT 60.108 55.000 4.42 0.00 0.00 2.66
3780 4402 1.656652 CGAGGCCTATGGTGACTTTG 58.343 55.000 4.42 0.00 0.00 2.77
3781 4403 1.066143 CGAGGCCTATGGTGACTTTGT 60.066 52.381 4.42 0.00 0.00 2.83
3782 4404 2.633488 GAGGCCTATGGTGACTTTGTC 58.367 52.381 4.42 0.00 0.00 3.18
3783 4405 1.985159 AGGCCTATGGTGACTTTGTCA 59.015 47.619 1.29 0.00 40.50 3.58
3784 4406 2.375174 AGGCCTATGGTGACTTTGTCAA 59.625 45.455 1.29 0.00 44.49 3.18
3785 4407 3.010584 AGGCCTATGGTGACTTTGTCAAT 59.989 43.478 1.29 0.00 44.49 2.57
3786 4408 3.378427 GGCCTATGGTGACTTTGTCAATC 59.622 47.826 0.00 0.00 44.49 2.67
3787 4409 3.378427 GCCTATGGTGACTTTGTCAATCC 59.622 47.826 1.73 1.76 44.49 3.01
3788 4410 4.848357 CCTATGGTGACTTTGTCAATCCT 58.152 43.478 1.73 0.00 44.49 3.24
3789 4411 4.637534 CCTATGGTGACTTTGTCAATCCTG 59.362 45.833 1.73 0.00 44.49 3.86
3790 4412 3.855255 TGGTGACTTTGTCAATCCTGA 57.145 42.857 1.73 0.00 44.49 3.86
3791 4413 3.743521 TGGTGACTTTGTCAATCCTGAG 58.256 45.455 1.73 0.00 44.49 3.35
3792 4414 3.077359 GGTGACTTTGTCAATCCTGAGG 58.923 50.000 1.73 0.00 44.49 3.86
3793 4415 3.077359 GTGACTTTGTCAATCCTGAGGG 58.923 50.000 0.00 0.00 44.49 4.30
3794 4416 2.711009 TGACTTTGTCAATCCTGAGGGT 59.289 45.455 0.00 0.00 39.78 4.34
3795 4417 3.138283 TGACTTTGTCAATCCTGAGGGTT 59.862 43.478 0.00 0.00 39.78 4.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
182 284 0.109086 CTACAGCGAGTGGTGACAGG 60.109 60.000 1.01 0.00 46.53 4.00
195 297 5.350365 TCATTAAACACGGTTCATCTACAGC 59.650 40.000 0.00 0.00 0.00 4.40
197 299 5.872617 CCTCATTAAACACGGTTCATCTACA 59.127 40.000 0.00 0.00 0.00 2.74
198 300 5.220605 GCCTCATTAAACACGGTTCATCTAC 60.221 44.000 0.00 0.00 0.00 2.59
209 311 5.886960 ATCAGACAAGCCTCATTAAACAC 57.113 39.130 0.00 0.00 0.00 3.32
484 841 3.441572 AGGCTGTTCACATCAAGCATTAC 59.558 43.478 0.00 0.00 0.00 1.89
566 923 1.625315 TCAGACTACACTGCCTGCATT 59.375 47.619 0.00 0.00 37.75 3.56
590 947 8.807118 TGTGGGTTTGCATTAGAAAAATATACA 58.193 29.630 0.00 0.00 0.00 2.29
813 1203 6.017109 GCAATAAGGTCAACTCAAGAGAAACA 60.017 38.462 3.73 0.00 0.00 2.83
884 1274 0.389948 AGCGTACAGGTGTTAGCTGC 60.390 55.000 7.84 0.00 46.94 5.25
959 1349 0.952280 TGGTACCGCTCATCGATCTC 59.048 55.000 7.57 0.00 41.67 2.75
972 1362 1.530283 CGGAAGGGGGATTGGTACC 59.470 63.158 4.43 4.43 0.00 3.34
1042 1432 1.649321 TCTGGACTGCCATTCAGAGT 58.351 50.000 0.00 0.00 45.72 3.24
1095 1485 0.687354 GTCTGACCTGAAGAAGCCCA 59.313 55.000 0.00 0.00 0.00 5.36
1204 1598 2.939353 AACTACTGCCCCCACCCC 60.939 66.667 0.00 0.00 0.00 4.95
1302 1701 4.218200 TGGAGCACCACAGAATAATGTTTG 59.782 41.667 0.00 0.00 41.77 2.93
1305 1704 3.264193 TCTGGAGCACCACAGAATAATGT 59.736 43.478 0.00 0.00 40.51 2.71
1395 1795 3.450817 TGTGCATCATATATCTACCCCGG 59.549 47.826 0.00 0.00 0.00 5.73
1407 1807 7.309133 CCTTTAAGACAAGGTTTGTGCATCATA 60.309 37.037 0.00 0.00 45.52 2.15
1408 1808 6.403866 TTTAAGACAAGGTTTGTGCATCAT 57.596 33.333 0.00 0.00 45.52 2.45
1409 1809 5.221224 CCTTTAAGACAAGGTTTGTGCATCA 60.221 40.000 0.00 0.00 45.52 3.07
1410 1810 5.222631 CCTTTAAGACAAGGTTTGTGCATC 58.777 41.667 0.00 0.00 45.52 3.91
1411 1811 5.200368 CCTTTAAGACAAGGTTTGTGCAT 57.800 39.130 0.00 0.00 45.52 3.96
1412 1812 4.647424 CCTTTAAGACAAGGTTTGTGCA 57.353 40.909 0.00 0.00 45.52 4.57
1424 1824 7.986562 ACAGAGTTCAAAAGAACCTTTAAGAC 58.013 34.615 4.86 0.00 35.79 3.01
1432 1832 3.495001 CGGAGACAGAGTTCAAAAGAACC 59.505 47.826 4.86 0.00 35.79 3.62
1436 1836 5.466728 TGAAATCGGAGACAGAGTTCAAAAG 59.533 40.000 10.86 0.00 45.61 2.27
1447 1847 1.447838 GGCGCTGAAATCGGAGACA 60.448 57.895 7.64 0.00 42.51 3.41
1449 1849 0.821517 TAAGGCGCTGAAATCGGAGA 59.178 50.000 7.64 0.00 45.75 3.71
1454 1854 2.098117 AGCAATGTAAGGCGCTGAAATC 59.902 45.455 7.64 0.00 32.33 2.17
1475 1875 3.307199 CGAGCAAGGAAGGGTTAAGGTAA 60.307 47.826 0.00 0.00 0.00 2.85
1503 1903 1.080705 CCTGTCCTGTCGACCGTTC 60.081 63.158 14.12 2.62 41.18 3.95
1507 1907 0.038159 CTGAACCTGTCCTGTCGACC 60.038 60.000 14.12 0.00 41.18 4.79
1592 1997 5.924356 TGCCTAATTCGGATACATCTCAAA 58.076 37.500 0.00 0.00 0.00 2.69
1634 2039 3.688185 TGCTTGCTTCACTCTCATGATTC 59.312 43.478 0.00 0.00 0.00 2.52
1718 2285 7.068839 TGGTTTTCTTATGCTCAAACCTAAACA 59.931 33.333 12.59 0.00 45.76 2.83
1737 2304 1.808343 ACCGGTTATCGCTTGGTTTTC 59.192 47.619 0.00 0.00 37.59 2.29
2071 2645 5.574970 AGGGATGAGATCTAACCAAATCC 57.425 43.478 0.00 2.22 32.94 3.01
2125 2699 1.149923 ACCCCAAGAAAAGGAGGCAAT 59.850 47.619 0.00 0.00 0.00 3.56
2126 2700 0.560688 ACCCCAAGAAAAGGAGGCAA 59.439 50.000 0.00 0.00 0.00 4.52
2127 2701 0.560688 AACCCCAAGAAAAGGAGGCA 59.439 50.000 0.00 0.00 0.00 4.75
2128 2702 1.203063 AGAACCCCAAGAAAAGGAGGC 60.203 52.381 0.00 0.00 0.00 4.70
2129 2703 2.980246 AGAACCCCAAGAAAAGGAGG 57.020 50.000 0.00 0.00 0.00 4.30
2181 2759 4.634443 CAGCGGTTTTATATATACAGGGGC 59.366 45.833 0.00 0.00 0.00 5.80
2266 2851 1.478288 GCAGAAGGGGATGGATGAAGG 60.478 57.143 0.00 0.00 0.00 3.46
2438 3031 4.946157 TCATTCAAGGCTCATTTCTTCTCC 59.054 41.667 0.00 0.00 0.00 3.71
2819 3422 3.031964 GATCAGCAGCACGGCACAC 62.032 63.158 0.00 0.00 35.83 3.82
2820 3423 2.743538 GATCAGCAGCACGGCACA 60.744 61.111 0.00 0.00 35.83 4.57
2877 3481 2.630098 TCAGTGAGAACTCAACAGAGGG 59.370 50.000 6.08 0.00 41.85 4.30
2923 3531 2.126734 GCAACCAGCACACGCATC 60.127 61.111 0.00 0.00 44.79 3.91
2933 3541 3.663995 TTGATTTCACCATGCAACCAG 57.336 42.857 0.00 0.00 0.00 4.00
2935 3543 4.211794 CAGTTTTGATTTCACCATGCAACC 59.788 41.667 0.00 0.00 0.00 3.77
2939 3555 5.927689 TCATTCAGTTTTGATTTCACCATGC 59.072 36.000 0.00 0.00 32.27 4.06
2997 3613 6.548321 TGTGGATTTCATACCTTGGTAAGTT 58.452 36.000 3.43 0.00 0.00 2.66
3002 3624 4.998051 AGTTGTGGATTTCATACCTTGGT 58.002 39.130 0.00 0.00 0.00 3.67
3007 3629 6.601613 TCACCATTAGTTGTGGATTTCATACC 59.398 38.462 0.00 0.00 39.12 2.73
3021 3643 5.529800 ACGCTTTACTGTTTCACCATTAGTT 59.470 36.000 0.00 0.00 0.00 2.24
3027 3649 3.810941 CCTAACGCTTTACTGTTTCACCA 59.189 43.478 0.00 0.00 0.00 4.17
3028 3650 3.364664 GCCTAACGCTTTACTGTTTCACC 60.365 47.826 0.00 0.00 0.00 4.02
3045 3667 2.301583 GCCTTTTCCATTGTTGGCCTAA 59.698 45.455 3.32 0.00 43.29 2.69
3046 3668 1.899142 GCCTTTTCCATTGTTGGCCTA 59.101 47.619 3.32 0.00 43.29 3.93
3104 3726 8.992073 GTCAATTGCTCAACCAGATTTATTTTT 58.008 29.630 0.00 0.00 0.00 1.94
3105 3727 7.329226 CGTCAATTGCTCAACCAGATTTATTTT 59.671 33.333 0.00 0.00 0.00 1.82
3106 3728 6.808212 CGTCAATTGCTCAACCAGATTTATTT 59.192 34.615 0.00 0.00 0.00 1.40
3107 3729 6.150976 TCGTCAATTGCTCAACCAGATTTATT 59.849 34.615 0.00 0.00 0.00 1.40
3108 3730 5.647658 TCGTCAATTGCTCAACCAGATTTAT 59.352 36.000 0.00 0.00 0.00 1.40
3109 3731 5.000591 TCGTCAATTGCTCAACCAGATTTA 58.999 37.500 0.00 0.00 0.00 1.40
3110 3732 3.820467 TCGTCAATTGCTCAACCAGATTT 59.180 39.130 0.00 0.00 0.00 2.17
3111 3733 3.411446 TCGTCAATTGCTCAACCAGATT 58.589 40.909 0.00 0.00 0.00 2.40
3112 3734 3.057969 TCGTCAATTGCTCAACCAGAT 57.942 42.857 0.00 0.00 0.00 2.90
3113 3735 2.542020 TCGTCAATTGCTCAACCAGA 57.458 45.000 0.00 0.00 0.00 3.86
3114 3736 3.837213 AATCGTCAATTGCTCAACCAG 57.163 42.857 0.00 0.00 0.00 4.00
3115 3737 5.414144 TCATAAATCGTCAATTGCTCAACCA 59.586 36.000 0.00 0.00 0.00 3.67
3116 3738 5.879237 TCATAAATCGTCAATTGCTCAACC 58.121 37.500 0.00 0.00 0.00 3.77
3117 3739 7.538678 AGTTTCATAAATCGTCAATTGCTCAAC 59.461 33.333 0.00 0.00 0.00 3.18
3118 3740 7.592938 AGTTTCATAAATCGTCAATTGCTCAA 58.407 30.769 0.00 0.00 0.00 3.02
3119 3741 7.144722 AGTTTCATAAATCGTCAATTGCTCA 57.855 32.000 0.00 0.00 0.00 4.26
3120 3742 8.452989 AAAGTTTCATAAATCGTCAATTGCTC 57.547 30.769 0.00 0.00 0.00 4.26
3121 3743 9.906660 TTAAAGTTTCATAAATCGTCAATTGCT 57.093 25.926 0.00 0.00 0.00 3.91
3162 3784 6.073657 CGAAATGCCATGTGTGATTTCTTTTT 60.074 34.615 0.00 0.00 34.17 1.94
3163 3785 5.406175 CGAAATGCCATGTGTGATTTCTTTT 59.594 36.000 0.00 0.00 34.17 2.27
3164 3786 4.925054 CGAAATGCCATGTGTGATTTCTTT 59.075 37.500 0.00 0.00 34.17 2.52
3165 3787 4.218200 TCGAAATGCCATGTGTGATTTCTT 59.782 37.500 0.00 0.00 34.17 2.52
3166 3788 3.758023 TCGAAATGCCATGTGTGATTTCT 59.242 39.130 0.00 0.00 34.17 2.52
3167 3789 4.095410 TCGAAATGCCATGTGTGATTTC 57.905 40.909 0.00 0.00 33.37 2.17
3168 3790 4.724074 ATCGAAATGCCATGTGTGATTT 57.276 36.364 0.00 0.00 0.00 2.17
3169 3791 6.395426 AATATCGAAATGCCATGTGTGATT 57.605 33.333 0.00 0.00 0.00 2.57
3170 3792 7.692460 ATAATATCGAAATGCCATGTGTGAT 57.308 32.000 0.00 0.00 0.00 3.06
3171 3793 8.791327 ATATAATATCGAAATGCCATGTGTGA 57.209 30.769 0.00 0.00 0.00 3.58
3190 3812 9.071276 CAAGGTTGTTGCAGAGGATAATATAAT 57.929 33.333 0.00 0.00 0.00 1.28
3191 3813 8.052748 ACAAGGTTGTTGCAGAGGATAATATAA 58.947 33.333 0.00 0.00 38.47 0.98
3192 3814 7.498900 CACAAGGTTGTTGCAGAGGATAATATA 59.501 37.037 0.00 0.00 39.91 0.86
3193 3815 6.319658 CACAAGGTTGTTGCAGAGGATAATAT 59.680 38.462 0.00 0.00 39.91 1.28
3194 3816 5.647658 CACAAGGTTGTTGCAGAGGATAATA 59.352 40.000 0.00 0.00 39.91 0.98
3195 3817 4.460382 CACAAGGTTGTTGCAGAGGATAAT 59.540 41.667 0.00 0.00 39.91 1.28
3196 3818 3.820467 CACAAGGTTGTTGCAGAGGATAA 59.180 43.478 0.00 0.00 39.91 1.75
3197 3819 3.181445 ACACAAGGTTGTTGCAGAGGATA 60.181 43.478 0.00 0.00 39.91 2.59
3198 3820 2.233271 CACAAGGTTGTTGCAGAGGAT 58.767 47.619 0.00 0.00 39.91 3.24
3199 3821 1.064758 ACACAAGGTTGTTGCAGAGGA 60.065 47.619 0.00 0.00 39.91 3.71
3200 3822 1.066002 CACACAAGGTTGTTGCAGAGG 59.934 52.381 0.00 0.00 39.91 3.69
3201 3823 1.066002 CCACACAAGGTTGTTGCAGAG 59.934 52.381 0.00 0.00 39.91 3.35
3202 3824 1.102154 CCACACAAGGTTGTTGCAGA 58.898 50.000 0.00 0.00 39.91 4.26
3203 3825 0.102844 CCCACACAAGGTTGTTGCAG 59.897 55.000 0.00 0.00 39.91 4.41
3204 3826 0.613292 ACCCACACAAGGTTGTTGCA 60.613 50.000 0.00 0.00 39.91 4.08
3205 3827 0.179113 CACCCACACAAGGTTGTTGC 60.179 55.000 0.00 0.00 39.91 4.17
3206 3828 0.459489 CCACCCACACAAGGTTGTTG 59.541 55.000 0.00 0.00 39.91 3.33
3207 3829 0.686112 CCCACCCACACAAGGTTGTT 60.686 55.000 0.00 0.00 39.91 2.83
3208 3830 1.076339 CCCACCCACACAAGGTTGT 60.076 57.895 0.00 0.00 43.36 3.32
3209 3831 2.498056 GCCCACCCACACAAGGTTG 61.498 63.158 0.00 0.00 34.56 3.77
3210 3832 2.123468 GCCCACCCACACAAGGTT 60.123 61.111 0.00 0.00 34.56 3.50
3211 3833 2.713531 GATGCCCACCCACACAAGGT 62.714 60.000 0.00 0.00 38.48 3.50
3212 3834 1.978617 GATGCCCACCCACACAAGG 60.979 63.158 0.00 0.00 0.00 3.61
3213 3835 2.334946 CGATGCCCACCCACACAAG 61.335 63.158 0.00 0.00 0.00 3.16
3214 3836 2.282110 CGATGCCCACCCACACAA 60.282 61.111 0.00 0.00 0.00 3.33
3215 3837 4.343323 CCGATGCCCACCCACACA 62.343 66.667 0.00 0.00 0.00 3.72
3216 3838 3.561120 TTCCGATGCCCACCCACAC 62.561 63.158 0.00 0.00 0.00 3.82
3217 3839 2.148723 ATTTCCGATGCCCACCCACA 62.149 55.000 0.00 0.00 0.00 4.17
3218 3840 1.379843 ATTTCCGATGCCCACCCAC 60.380 57.895 0.00 0.00 0.00 4.61
3219 3841 1.077068 GATTTCCGATGCCCACCCA 60.077 57.895 0.00 0.00 0.00 4.51
3220 3842 1.828224 GGATTTCCGATGCCCACCC 60.828 63.158 0.00 0.00 0.00 4.61
3221 3843 3.841870 GGATTTCCGATGCCCACC 58.158 61.111 0.00 0.00 0.00 4.61
3231 3853 1.313091 GGGAGCACCAACGGATTTCC 61.313 60.000 1.58 0.00 39.85 3.13
3232 3854 1.644786 CGGGAGCACCAACGGATTTC 61.645 60.000 1.58 0.00 40.22 2.17
3233 3855 1.674322 CGGGAGCACCAACGGATTT 60.674 57.895 1.58 0.00 40.22 2.17
3234 3856 2.046314 CGGGAGCACCAACGGATT 60.046 61.111 1.58 0.00 40.22 3.01
3238 3860 4.760047 CTCCCGGGAGCACCAACG 62.760 72.222 36.90 12.91 40.22 4.10
3302 3924 8.238481 AGATGTATACGCCAAATTTTTGTTTG 57.762 30.769 0.00 0.00 38.50 2.93
3303 3925 7.272515 CGAGATGTATACGCCAAATTTTTGTTT 59.727 33.333 0.00 0.00 36.45 2.83
3304 3926 6.745450 CGAGATGTATACGCCAAATTTTTGTT 59.255 34.615 0.00 0.00 36.45 2.83
3305 3927 6.092944 TCGAGATGTATACGCCAAATTTTTGT 59.907 34.615 0.00 0.00 36.45 2.83
3306 3928 6.410914 GTCGAGATGTATACGCCAAATTTTTG 59.589 38.462 0.00 0.00 37.90 2.44
3307 3929 6.092944 TGTCGAGATGTATACGCCAAATTTTT 59.907 34.615 0.00 0.00 0.00 1.94
3308 3930 5.583061 TGTCGAGATGTATACGCCAAATTTT 59.417 36.000 0.00 0.00 0.00 1.82
3309 3931 5.113383 TGTCGAGATGTATACGCCAAATTT 58.887 37.500 0.00 0.00 0.00 1.82
3310 3932 4.689071 TGTCGAGATGTATACGCCAAATT 58.311 39.130 0.00 0.00 0.00 1.82
3311 3933 4.316205 TGTCGAGATGTATACGCCAAAT 57.684 40.909 0.00 0.00 0.00 2.32
3312 3934 3.786516 TGTCGAGATGTATACGCCAAA 57.213 42.857 0.00 0.00 0.00 3.28
3313 3935 4.316205 AATGTCGAGATGTATACGCCAA 57.684 40.909 0.00 0.00 0.00 4.52
3314 3936 5.638596 ATAATGTCGAGATGTATACGCCA 57.361 39.130 0.00 0.00 0.00 5.69
3315 3937 7.194278 ACATATAATGTCGAGATGTATACGCC 58.806 38.462 0.00 0.00 39.92 5.68
3336 3958 5.912892 TCCGAAACTTGATATGCAGACATA 58.087 37.500 0.00 0.00 42.85 2.29
3337 3959 4.769688 TCCGAAACTTGATATGCAGACAT 58.230 39.130 0.00 0.00 40.49 3.06
3338 3960 4.081697 TCTCCGAAACTTGATATGCAGACA 60.082 41.667 0.00 0.00 0.00 3.41
3339 3961 4.433615 TCTCCGAAACTTGATATGCAGAC 58.566 43.478 0.00 0.00 0.00 3.51
3340 3962 4.736126 TCTCCGAAACTTGATATGCAGA 57.264 40.909 0.00 0.00 0.00 4.26
3341 3963 5.801350 TTTCTCCGAAACTTGATATGCAG 57.199 39.130 0.00 0.00 0.00 4.41
3342 3964 5.106317 GGTTTTCTCCGAAACTTGATATGCA 60.106 40.000 0.00 0.00 39.05 3.96
3343 3965 5.332707 GGTTTTCTCCGAAACTTGATATGC 58.667 41.667 0.00 0.00 39.05 3.14
3394 4016 5.296780 TCACAAGACAAGACATCCTTTTGTC 59.703 40.000 8.17 8.17 46.83 3.18
3395 4017 5.192927 TCACAAGACAAGACATCCTTTTGT 58.807 37.500 0.00 0.00 35.08 2.83
3396 4018 5.756195 TCACAAGACAAGACATCCTTTTG 57.244 39.130 0.00 0.00 31.42 2.44
3397 4019 6.773976 TTTCACAAGACAAGACATCCTTTT 57.226 33.333 0.00 0.00 31.42 2.27
3398 4020 6.681368 GCTTTTCACAAGACAAGACATCCTTT 60.681 38.462 0.00 0.00 34.24 3.11
3399 4021 5.221126 GCTTTTCACAAGACAAGACATCCTT 60.221 40.000 0.00 0.00 34.24 3.36
3400 4022 4.276926 GCTTTTCACAAGACAAGACATCCT 59.723 41.667 0.00 0.00 34.24 3.24
3401 4023 4.036734 TGCTTTTCACAAGACAAGACATCC 59.963 41.667 0.00 0.00 34.24 3.51
3402 4024 5.173774 TGCTTTTCACAAGACAAGACATC 57.826 39.130 0.00 0.00 34.24 3.06
3403 4025 5.779529 ATGCTTTTCACAAGACAAGACAT 57.220 34.783 0.00 0.00 34.24 3.06
3404 4026 5.581126 AATGCTTTTCACAAGACAAGACA 57.419 34.783 0.00 0.00 34.24 3.41
3405 4027 6.892310 AAAATGCTTTTCACAAGACAAGAC 57.108 33.333 0.00 0.00 34.24 3.01
3406 4028 8.994429 TTAAAAATGCTTTTCACAAGACAAGA 57.006 26.923 0.00 0.00 34.24 3.02
3408 4030 9.818796 GTTTTAAAAATGCTTTTCACAAGACAA 57.181 25.926 1.31 0.00 36.20 3.18
3409 4031 8.447053 GGTTTTAAAAATGCTTTTCACAAGACA 58.553 29.630 1.31 0.00 36.20 3.41
3410 4032 8.447053 TGGTTTTAAAAATGCTTTTCACAAGAC 58.553 29.630 1.31 0.05 36.20 3.01
3411 4033 8.553459 TGGTTTTAAAAATGCTTTTCACAAGA 57.447 26.923 1.31 0.00 36.20 3.02
3412 4034 8.663911 TCTGGTTTTAAAAATGCTTTTCACAAG 58.336 29.630 1.31 0.00 36.20 3.16
3413 4035 8.553459 TCTGGTTTTAAAAATGCTTTTCACAA 57.447 26.923 1.31 0.00 36.20 3.33
3414 4036 8.729805 ATCTGGTTTTAAAAATGCTTTTCACA 57.270 26.923 1.31 0.00 36.20 3.58
3420 4042 9.394767 AGACAAAATCTGGTTTTAAAAATGCTT 57.605 25.926 1.31 0.00 37.93 3.91
3421 4043 8.962884 AGACAAAATCTGGTTTTAAAAATGCT 57.037 26.923 1.31 0.00 37.93 3.79
3422 4044 9.650371 GAAGACAAAATCTGGTTTTAAAAATGC 57.350 29.630 1.31 0.00 37.93 3.56
3427 4049 9.581099 GTGAAGAAGACAAAATCTGGTTTTAAA 57.419 29.630 0.00 0.00 37.93 1.52
3428 4050 8.744652 TGTGAAGAAGACAAAATCTGGTTTTAA 58.255 29.630 0.00 0.00 37.93 1.52
3429 4051 8.287439 TGTGAAGAAGACAAAATCTGGTTTTA 57.713 30.769 0.00 0.00 37.93 1.52
3430 4052 7.169158 TGTGAAGAAGACAAAATCTGGTTTT 57.831 32.000 0.00 0.00 40.59 2.43
3431 4053 6.183360 CCTGTGAAGAAGACAAAATCTGGTTT 60.183 38.462 0.00 0.00 37.88 3.27
3432 4054 5.300286 CCTGTGAAGAAGACAAAATCTGGTT 59.700 40.000 0.00 0.00 37.88 3.67
3433 4055 4.823989 CCTGTGAAGAAGACAAAATCTGGT 59.176 41.667 0.00 0.00 37.88 4.00
3434 4056 4.823989 ACCTGTGAAGAAGACAAAATCTGG 59.176 41.667 0.00 0.00 37.88 3.86
3435 4057 5.528690 TCACCTGTGAAGAAGACAAAATCTG 59.471 40.000 0.00 0.00 35.52 2.90
3436 4058 5.684704 TCACCTGTGAAGAAGACAAAATCT 58.315 37.500 0.00 0.00 36.42 2.40
3437 4059 5.760253 TCTCACCTGTGAAGAAGACAAAATC 59.240 40.000 1.14 0.00 39.39 2.17
3438 4060 5.529060 GTCTCACCTGTGAAGAAGACAAAAT 59.471 40.000 10.70 0.00 39.39 1.82
3439 4061 4.876107 GTCTCACCTGTGAAGAAGACAAAA 59.124 41.667 10.70 0.00 39.39 2.44
3440 4062 4.442706 GTCTCACCTGTGAAGAAGACAAA 58.557 43.478 10.70 0.00 39.39 2.83
3441 4063 3.490933 CGTCTCACCTGTGAAGAAGACAA 60.491 47.826 14.10 0.00 39.39 3.18
3442 4064 2.034685 CGTCTCACCTGTGAAGAAGACA 59.965 50.000 14.10 0.00 39.39 3.41
3443 4065 2.667137 CGTCTCACCTGTGAAGAAGAC 58.333 52.381 1.14 4.72 39.39 3.01
3444 4066 1.000163 GCGTCTCACCTGTGAAGAAGA 60.000 52.381 1.14 0.00 39.39 2.87
3445 4067 1.423395 GCGTCTCACCTGTGAAGAAG 58.577 55.000 1.14 5.26 39.39 2.85
3446 4068 0.318699 CGCGTCTCACCTGTGAAGAA 60.319 55.000 0.00 0.00 39.39 2.52
3447 4069 1.170290 TCGCGTCTCACCTGTGAAGA 61.170 55.000 5.77 0.00 39.39 2.87
3448 4070 1.004277 GTCGCGTCTCACCTGTGAAG 61.004 60.000 5.77 0.00 39.39 3.02
3449 4071 1.007734 GTCGCGTCTCACCTGTGAA 60.008 57.895 5.77 0.00 39.39 3.18
3450 4072 2.190841 TGTCGCGTCTCACCTGTGA 61.191 57.895 5.77 0.00 38.06 3.58
3451 4073 2.016704 GTGTCGCGTCTCACCTGTG 61.017 63.158 5.77 0.00 0.00 3.66
3452 4074 1.806461 ATGTGTCGCGTCTCACCTGT 61.806 55.000 21.09 10.34 34.14 4.00
3453 4075 0.170339 TATGTGTCGCGTCTCACCTG 59.830 55.000 21.09 0.00 34.14 4.00
3454 4076 0.885879 TTATGTGTCGCGTCTCACCT 59.114 50.000 21.09 16.39 34.14 4.00
3455 4077 1.269166 CTTATGTGTCGCGTCTCACC 58.731 55.000 21.09 9.90 34.14 4.02
3456 4078 1.978542 ACTTATGTGTCGCGTCTCAC 58.021 50.000 18.72 18.72 35.43 3.51
3457 4079 2.287970 ACAACTTATGTGTCGCGTCTCA 60.288 45.455 5.77 8.47 41.93 3.27
3458 4080 2.325761 ACAACTTATGTGTCGCGTCTC 58.674 47.619 5.77 1.52 41.93 3.36
3459 4081 2.325761 GACAACTTATGTGTCGCGTCT 58.674 47.619 5.77 0.00 44.12 4.18
3460 4082 1.057285 CGACAACTTATGTGTCGCGTC 59.943 52.381 13.26 0.00 46.48 5.19
3461 4083 1.057636 CGACAACTTATGTGTCGCGT 58.942 50.000 13.26 0.00 46.48 6.01
3462 4084 3.830801 CGACAACTTATGTGTCGCG 57.169 52.632 13.26 0.00 46.48 5.87
3465 4087 5.679792 GTGAAAAACCGACAACTTATGTGTC 59.320 40.000 0.00 0.00 44.12 3.67
3466 4088 5.575019 GTGAAAAACCGACAACTTATGTGT 58.425 37.500 0.00 0.00 44.12 3.72
3467 4089 4.668837 CGTGAAAAACCGACAACTTATGTG 59.331 41.667 0.00 0.00 44.12 3.21
3468 4090 8.354645 GTTTCGTGAAAAACCGACAACTTATGT 61.355 37.037 0.00 0.00 37.79 2.29
3469 4091 5.085636 TCGTGAAAAACCGACAACTTATG 57.914 39.130 0.00 0.00 0.00 1.90
3470 4092 5.738118 TTCGTGAAAAACCGACAACTTAT 57.262 34.783 0.00 0.00 31.95 1.73
3471 4093 5.323105 GTTTCGTGAAAAACCGACAACTTA 58.677 37.500 0.00 0.00 33.86 2.24
3472 4094 4.160594 GTTTCGTGAAAAACCGACAACTT 58.839 39.130 0.00 0.00 33.86 2.66
3473 4095 3.725600 CGTTTCGTGAAAAACCGACAACT 60.726 43.478 0.00 0.00 36.06 3.16
3474 4096 2.523116 CGTTTCGTGAAAAACCGACAAC 59.477 45.455 0.00 0.00 36.06 3.32
3475 4097 2.414481 TCGTTTCGTGAAAAACCGACAA 59.586 40.909 0.00 0.00 36.06 3.18
3476 4098 1.998315 TCGTTTCGTGAAAAACCGACA 59.002 42.857 0.00 0.00 36.06 4.35
3477 4099 2.029606 AGTCGTTTCGTGAAAAACCGAC 59.970 45.455 20.27 20.27 39.78 4.79
3478 4100 2.270047 AGTCGTTTCGTGAAAAACCGA 58.730 42.857 0.00 0.03 36.06 4.69
3479 4101 2.724744 AGTCGTTTCGTGAAAAACCG 57.275 45.000 0.00 0.00 36.06 4.44
3480 4102 4.618067 ACAAAAGTCGTTTCGTGAAAAACC 59.382 37.500 0.00 0.00 36.06 3.27
3481 4103 5.340138 TCACAAAAGTCGTTTCGTGAAAAAC 59.660 36.000 11.20 0.00 35.84 2.43
3482 4104 5.450171 TCACAAAAGTCGTTTCGTGAAAAA 58.550 33.333 11.20 0.00 35.84 1.94
3483 4105 5.032100 TCACAAAAGTCGTTTCGTGAAAA 57.968 34.783 11.20 0.00 35.84 2.29
3484 4106 4.643953 CTCACAAAAGTCGTTTCGTGAAA 58.356 39.130 13.17 0.00 37.09 2.69
3485 4107 3.484557 GCTCACAAAAGTCGTTTCGTGAA 60.485 43.478 13.17 0.00 37.09 3.18
3486 4108 2.029970 GCTCACAAAAGTCGTTTCGTGA 59.970 45.455 12.26 12.26 36.13 4.35
3487 4109 2.222931 TGCTCACAAAAGTCGTTTCGTG 60.223 45.455 7.17 7.17 33.31 4.35
3488 4110 2.004017 TGCTCACAAAAGTCGTTTCGT 58.996 42.857 0.00 0.00 0.00 3.85
3489 4111 2.730183 TGCTCACAAAAGTCGTTTCG 57.270 45.000 0.00 0.00 0.00 3.46
3490 4112 3.952535 ACATGCTCACAAAAGTCGTTTC 58.047 40.909 0.00 0.00 0.00 2.78
3491 4113 4.334203 TGTACATGCTCACAAAAGTCGTTT 59.666 37.500 0.00 0.00 0.00 3.60
3492 4114 3.874543 TGTACATGCTCACAAAAGTCGTT 59.125 39.130 0.00 0.00 0.00 3.85
3493 4115 3.462982 TGTACATGCTCACAAAAGTCGT 58.537 40.909 0.00 0.00 0.00 4.34
3494 4116 4.466567 TTGTACATGCTCACAAAAGTCG 57.533 40.909 0.00 0.00 31.93 4.18
3495 4117 6.901887 CGATATTGTACATGCTCACAAAAGTC 59.098 38.462 10.93 8.83 38.11 3.01
3496 4118 6.593770 TCGATATTGTACATGCTCACAAAAGT 59.406 34.615 10.93 2.78 38.11 2.66
3497 4119 7.003939 TCGATATTGTACATGCTCACAAAAG 57.996 36.000 10.93 5.10 38.11 2.27
3498 4120 6.816140 TCTCGATATTGTACATGCTCACAAAA 59.184 34.615 10.93 0.00 38.11 2.44
3499 4121 6.337356 TCTCGATATTGTACATGCTCACAAA 58.663 36.000 10.93 3.76 38.11 2.83
3500 4122 5.901552 TCTCGATATTGTACATGCTCACAA 58.098 37.500 9.69 9.69 38.89 3.33
3501 4123 5.514274 TCTCGATATTGTACATGCTCACA 57.486 39.130 0.00 0.00 0.00 3.58
3502 4124 9.227490 GTATATCTCGATATTGTACATGCTCAC 57.773 37.037 0.00 0.00 35.71 3.51
3503 4125 8.122952 CGTATATCTCGATATTGTACATGCTCA 58.877 37.037 0.00 0.00 35.71 4.26
3504 4126 7.112287 GCGTATATCTCGATATTGTACATGCTC 59.888 40.741 0.00 0.00 35.71 4.26
3505 4127 6.913132 GCGTATATCTCGATATTGTACATGCT 59.087 38.462 0.00 0.00 35.71 3.79
3506 4128 6.129691 CGCGTATATCTCGATATTGTACATGC 60.130 42.308 0.00 3.64 35.71 4.06
3507 4129 6.129691 GCGCGTATATCTCGATATTGTACATG 60.130 42.308 8.43 0.00 35.71 3.21
3508 4130 5.907945 GCGCGTATATCTCGATATTGTACAT 59.092 40.000 8.43 0.00 35.71 2.29
3509 4131 5.260900 GCGCGTATATCTCGATATTGTACA 58.739 41.667 8.43 0.00 35.71 2.90
3510 4132 4.669728 GGCGCGTATATCTCGATATTGTAC 59.330 45.833 8.43 0.00 35.71 2.90
3511 4133 4.333372 TGGCGCGTATATCTCGATATTGTA 59.667 41.667 8.43 0.00 35.71 2.41
3512 4134 3.128068 TGGCGCGTATATCTCGATATTGT 59.872 43.478 8.43 0.00 35.71 2.71
3513 4135 3.691498 TGGCGCGTATATCTCGATATTG 58.309 45.455 8.43 1.03 35.71 1.90
3514 4136 4.142447 ACTTGGCGCGTATATCTCGATATT 60.142 41.667 8.43 0.00 35.71 1.28
3515 4137 3.377485 ACTTGGCGCGTATATCTCGATAT 59.623 43.478 8.43 4.94 37.69 1.63
3516 4138 2.745821 ACTTGGCGCGTATATCTCGATA 59.254 45.455 8.43 0.00 0.00 2.92
3517 4139 1.540267 ACTTGGCGCGTATATCTCGAT 59.460 47.619 8.43 0.00 0.00 3.59
3518 4140 0.949397 ACTTGGCGCGTATATCTCGA 59.051 50.000 8.43 0.00 0.00 4.04
3519 4141 1.767289 AACTTGGCGCGTATATCTCG 58.233 50.000 8.43 0.00 0.00 4.04
3520 4142 4.201783 ACAAAAACTTGGCGCGTATATCTC 60.202 41.667 8.43 0.00 0.00 2.75
3521 4143 3.687698 ACAAAAACTTGGCGCGTATATCT 59.312 39.130 8.43 0.00 0.00 1.98
3522 4144 4.011058 ACAAAAACTTGGCGCGTATATC 57.989 40.909 8.43 0.00 0.00 1.63
3523 4145 4.428615 AACAAAAACTTGGCGCGTATAT 57.571 36.364 8.43 0.00 0.00 0.86
3524 4146 3.900388 AACAAAAACTTGGCGCGTATA 57.100 38.095 8.43 0.00 0.00 1.47
3525 4147 2.785713 AACAAAAACTTGGCGCGTAT 57.214 40.000 8.43 0.00 0.00 3.06
3526 4148 2.186076 CAAACAAAAACTTGGCGCGTA 58.814 42.857 8.43 0.00 0.00 4.42
3527 4149 0.995728 CAAACAAAAACTTGGCGCGT 59.004 45.000 8.43 0.00 0.00 6.01
3528 4150 0.300193 CCAAACAAAAACTTGGCGCG 59.700 50.000 0.00 0.00 35.97 6.86
3529 4151 1.646189 TCCAAACAAAAACTTGGCGC 58.354 45.000 0.00 0.00 41.65 6.53
3530 4152 4.873768 AATTCCAAACAAAAACTTGGCG 57.126 36.364 0.00 0.00 41.65 5.69
3570 4192 9.720769 TCCTGGTTTTTAAATGTGTTTTAAACA 57.279 25.926 6.41 6.41 45.11 2.83
3572 4194 8.884726 GCTCCTGGTTTTTAAATGTGTTTTAAA 58.115 29.630 0.00 0.43 44.25 1.52
3573 4195 8.261522 AGCTCCTGGTTTTTAAATGTGTTTTAA 58.738 29.630 0.00 0.00 37.87 1.52
3574 4196 7.787028 AGCTCCTGGTTTTTAAATGTGTTTTA 58.213 30.769 0.00 0.00 0.00 1.52
3575 4197 6.649155 AGCTCCTGGTTTTTAAATGTGTTTT 58.351 32.000 0.00 0.00 0.00 2.43
3576 4198 6.233905 AGCTCCTGGTTTTTAAATGTGTTT 57.766 33.333 0.00 0.00 0.00 2.83
3577 4199 5.507315 CGAGCTCCTGGTTTTTAAATGTGTT 60.507 40.000 8.47 0.00 0.00 3.32
3578 4200 4.023193 CGAGCTCCTGGTTTTTAAATGTGT 60.023 41.667 8.47 0.00 0.00 3.72
3579 4201 4.475944 CGAGCTCCTGGTTTTTAAATGTG 58.524 43.478 8.47 0.00 0.00 3.21
3580 4202 3.057526 GCGAGCTCCTGGTTTTTAAATGT 60.058 43.478 8.47 0.00 0.00 2.71
3581 4203 3.501950 GCGAGCTCCTGGTTTTTAAATG 58.498 45.455 8.47 0.00 0.00 2.32
3582 4204 2.161609 CGCGAGCTCCTGGTTTTTAAAT 59.838 45.455 8.47 0.00 0.00 1.40
3583 4205 1.533731 CGCGAGCTCCTGGTTTTTAAA 59.466 47.619 8.47 0.00 0.00 1.52
3584 4206 1.153353 CGCGAGCTCCTGGTTTTTAA 58.847 50.000 8.47 0.00 0.00 1.52
3585 4207 2.835605 CGCGAGCTCCTGGTTTTTA 58.164 52.632 8.47 0.00 0.00 1.52
3586 4208 3.655481 CGCGAGCTCCTGGTTTTT 58.345 55.556 8.47 0.00 0.00 1.94
3598 4220 1.138636 CTGACACATGAGAGCGCGAG 61.139 60.000 12.10 0.00 0.00 5.03
3599 4221 1.153958 CTGACACATGAGAGCGCGA 60.154 57.895 12.10 0.00 0.00 5.87
3600 4222 2.796425 GCTGACACATGAGAGCGCG 61.796 63.158 0.00 0.00 0.00 6.86
3601 4223 1.739196 TGCTGACACATGAGAGCGC 60.739 57.895 0.00 0.00 33.97 5.92
3602 4224 2.076582 GTGCTGACACATGAGAGCG 58.923 57.895 0.00 0.00 46.61 5.03
3612 4234 1.106944 TCGAGAGTGGTGTGCTGACA 61.107 55.000 0.00 0.00 0.00 3.58
3613 4235 0.032130 TTCGAGAGTGGTGTGCTGAC 59.968 55.000 0.00 0.00 0.00 3.51
3614 4236 0.750249 TTTCGAGAGTGGTGTGCTGA 59.250 50.000 0.00 0.00 0.00 4.26
3615 4237 1.261619 GTTTTCGAGAGTGGTGTGCTG 59.738 52.381 0.00 0.00 0.00 4.41
3616 4238 1.139058 AGTTTTCGAGAGTGGTGTGCT 59.861 47.619 0.00 0.00 0.00 4.40
3617 4239 1.583054 AGTTTTCGAGAGTGGTGTGC 58.417 50.000 0.00 0.00 0.00 4.57
3618 4240 3.978687 ACTAGTTTTCGAGAGTGGTGTG 58.021 45.455 0.00 0.00 0.00 3.82
3619 4241 4.142004 ACAACTAGTTTTCGAGAGTGGTGT 60.142 41.667 5.07 0.00 0.00 4.16
3620 4242 4.369182 ACAACTAGTTTTCGAGAGTGGTG 58.631 43.478 5.07 0.00 0.00 4.17
3621 4243 4.667519 ACAACTAGTTTTCGAGAGTGGT 57.332 40.909 5.07 0.00 0.00 4.16
3622 4244 6.866770 TGAATACAACTAGTTTTCGAGAGTGG 59.133 38.462 5.07 0.00 39.96 4.00
3623 4245 7.869016 TGAATACAACTAGTTTTCGAGAGTG 57.131 36.000 5.07 0.00 39.96 3.51
3624 4246 9.141400 GATTGAATACAACTAGTTTTCGAGAGT 57.859 33.333 5.07 1.54 39.96 3.24
3625 4247 8.314635 CGATTGAATACAACTAGTTTTCGAGAG 58.685 37.037 5.07 2.93 39.96 3.20
3626 4248 8.024865 TCGATTGAATACAACTAGTTTTCGAGA 58.975 33.333 5.07 3.84 39.96 4.04
3627 4249 8.169839 TCGATTGAATACAACTAGTTTTCGAG 57.830 34.615 5.07 0.00 39.96 4.04
3628 4250 7.274904 CCTCGATTGAATACAACTAGTTTTCGA 59.725 37.037 5.07 8.04 39.96 3.71
3629 4251 7.274904 TCCTCGATTGAATACAACTAGTTTTCG 59.725 37.037 5.07 0.00 39.96 3.46
3630 4252 8.475331 TCCTCGATTGAATACAACTAGTTTTC 57.525 34.615 5.07 8.38 38.90 2.29
3631 4253 8.718734 GTTCCTCGATTGAATACAACTAGTTTT 58.281 33.333 5.07 1.84 38.90 2.43
3632 4254 8.095169 AGTTCCTCGATTGAATACAACTAGTTT 58.905 33.333 5.07 0.62 38.90 2.66
3633 4255 7.612677 AGTTCCTCGATTGAATACAACTAGTT 58.387 34.615 1.12 1.12 38.90 2.24
3634 4256 7.171630 AGTTCCTCGATTGAATACAACTAGT 57.828 36.000 0.00 0.00 38.90 2.57
3635 4257 9.239002 CTTAGTTCCTCGATTGAATACAACTAG 57.761 37.037 1.43 0.00 38.90 2.57
3636 4258 8.746530 ACTTAGTTCCTCGATTGAATACAACTA 58.253 33.333 1.43 0.00 38.90 2.24
3637 4259 7.612677 ACTTAGTTCCTCGATTGAATACAACT 58.387 34.615 1.43 0.00 38.90 3.16
3638 4260 7.829378 ACTTAGTTCCTCGATTGAATACAAC 57.171 36.000 1.43 0.00 38.90 3.32
3639 4261 9.932207 TTTACTTAGTTCCTCGATTGAATACAA 57.068 29.630 0.00 0.00 40.42 2.41
3640 4262 9.582431 CTTTACTTAGTTCCTCGATTGAATACA 57.418 33.333 0.00 0.00 0.00 2.29
3641 4263 9.032420 CCTTTACTTAGTTCCTCGATTGAATAC 57.968 37.037 0.00 0.00 0.00 1.89
3642 4264 8.755977 ACCTTTACTTAGTTCCTCGATTGAATA 58.244 33.333 0.00 0.00 0.00 1.75
3643 4265 7.621796 ACCTTTACTTAGTTCCTCGATTGAAT 58.378 34.615 0.00 0.00 0.00 2.57
3644 4266 7.001099 ACCTTTACTTAGTTCCTCGATTGAA 57.999 36.000 0.00 0.00 0.00 2.69
3645 4267 6.600882 ACCTTTACTTAGTTCCTCGATTGA 57.399 37.500 0.00 0.00 0.00 2.57
3646 4268 6.092259 CCAACCTTTACTTAGTTCCTCGATTG 59.908 42.308 0.00 0.00 0.00 2.67
3647 4269 6.171213 CCAACCTTTACTTAGTTCCTCGATT 58.829 40.000 0.00 0.00 0.00 3.34
3648 4270 5.247792 ACCAACCTTTACTTAGTTCCTCGAT 59.752 40.000 0.00 0.00 0.00 3.59
3649 4271 4.590222 ACCAACCTTTACTTAGTTCCTCGA 59.410 41.667 0.00 0.00 0.00 4.04
3650 4272 4.891260 ACCAACCTTTACTTAGTTCCTCG 58.109 43.478 0.00 0.00 0.00 4.63
3651 4273 7.002250 ACTACCAACCTTTACTTAGTTCCTC 57.998 40.000 0.00 0.00 0.00 3.71
3652 4274 7.384524 AACTACCAACCTTTACTTAGTTCCT 57.615 36.000 0.00 0.00 0.00 3.36
3653 4275 7.821359 CCTAACTACCAACCTTTACTTAGTTCC 59.179 40.741 0.00 0.00 33.12 3.62
3654 4276 8.588472 TCCTAACTACCAACCTTTACTTAGTTC 58.412 37.037 0.00 0.00 33.12 3.01
3655 4277 8.496534 TCCTAACTACCAACCTTTACTTAGTT 57.503 34.615 0.00 0.00 34.82 2.24
3656 4278 8.370940 GTTCCTAACTACCAACCTTTACTTAGT 58.629 37.037 0.00 0.00 0.00 2.24
3657 4279 8.370182 TGTTCCTAACTACCAACCTTTACTTAG 58.630 37.037 0.00 0.00 0.00 2.18
3658 4280 8.261349 TGTTCCTAACTACCAACCTTTACTTA 57.739 34.615 0.00 0.00 0.00 2.24
3659 4281 7.140522 TGTTCCTAACTACCAACCTTTACTT 57.859 36.000 0.00 0.00 0.00 2.24
3660 4282 6.752285 TGTTCCTAACTACCAACCTTTACT 57.248 37.500 0.00 0.00 0.00 2.24
3661 4283 7.991084 ATTGTTCCTAACTACCAACCTTTAC 57.009 36.000 0.00 0.00 0.00 2.01
3664 4286 9.847224 CATATATTGTTCCTAACTACCAACCTT 57.153 33.333 0.00 0.00 0.00 3.50
3665 4287 9.220906 TCATATATTGTTCCTAACTACCAACCT 57.779 33.333 0.00 0.00 0.00 3.50
3666 4288 9.269453 GTCATATATTGTTCCTAACTACCAACC 57.731 37.037 0.00 0.00 0.00 3.77
3669 4291 9.209048 ACAGTCATATATTGTTCCTAACTACCA 57.791 33.333 0.00 0.00 0.00 3.25
3674 4296 9.654663 GGGATACAGTCATATATTGTTCCTAAC 57.345 37.037 12.22 0.00 39.74 2.34
3675 4297 9.387397 TGGGATACAGTCATATATTGTTCCTAA 57.613 33.333 12.22 0.00 39.74 2.69
3676 4298 8.966155 TGGGATACAGTCATATATTGTTCCTA 57.034 34.615 12.22 7.50 39.74 2.94
3677 4299 7.872061 TGGGATACAGTCATATATTGTTCCT 57.128 36.000 12.22 0.00 39.74 3.36
3678 4300 7.119846 GCTTGGGATACAGTCATATATTGTTCC 59.880 40.741 0.00 2.77 39.74 3.62
3679 4301 7.119846 GGCTTGGGATACAGTCATATATTGTTC 59.880 40.741 0.00 0.00 39.74 3.18
3680 4302 6.942576 GGCTTGGGATACAGTCATATATTGTT 59.057 38.462 0.00 0.00 39.74 2.83
3681 4303 6.273260 AGGCTTGGGATACAGTCATATATTGT 59.727 38.462 0.00 0.00 39.74 2.71
3682 4304 6.715280 AGGCTTGGGATACAGTCATATATTG 58.285 40.000 0.00 0.00 39.74 1.90
3683 4305 6.959606 AGGCTTGGGATACAGTCATATATT 57.040 37.500 0.00 0.00 39.74 1.28
3684 4306 7.092846 GGTTAGGCTTGGGATACAGTCATATAT 60.093 40.741 0.00 0.00 39.74 0.86
3685 4307 6.212791 GGTTAGGCTTGGGATACAGTCATATA 59.787 42.308 0.00 0.00 39.74 0.86
3686 4308 5.013183 GGTTAGGCTTGGGATACAGTCATAT 59.987 44.000 0.00 0.00 39.74 1.78
3687 4309 4.347000 GGTTAGGCTTGGGATACAGTCATA 59.653 45.833 0.00 0.00 39.74 2.15
3688 4310 3.136626 GGTTAGGCTTGGGATACAGTCAT 59.863 47.826 0.00 0.00 39.74 3.06
3689 4311 2.504175 GGTTAGGCTTGGGATACAGTCA 59.496 50.000 0.00 0.00 39.74 3.41
3690 4312 2.158798 GGGTTAGGCTTGGGATACAGTC 60.159 54.545 0.00 0.00 39.74 3.51
3691 4313 1.844497 GGGTTAGGCTTGGGATACAGT 59.156 52.381 0.00 0.00 39.74 3.55
3692 4314 1.843851 TGGGTTAGGCTTGGGATACAG 59.156 52.381 0.00 0.00 39.74 2.74
3693 4315 1.974028 TGGGTTAGGCTTGGGATACA 58.026 50.000 0.00 0.00 39.74 2.29
3694 4316 2.025699 TGTTGGGTTAGGCTTGGGATAC 60.026 50.000 0.00 0.00 0.00 2.24
3695 4317 2.280103 TGTTGGGTTAGGCTTGGGATA 58.720 47.619 0.00 0.00 0.00 2.59
3696 4318 1.080638 TGTTGGGTTAGGCTTGGGAT 58.919 50.000 0.00 0.00 0.00 3.85
3697 4319 0.854218 TTGTTGGGTTAGGCTTGGGA 59.146 50.000 0.00 0.00 0.00 4.37
3698 4320 1.256812 CTTGTTGGGTTAGGCTTGGG 58.743 55.000 0.00 0.00 0.00 4.12
3699 4321 1.256812 CCTTGTTGGGTTAGGCTTGG 58.743 55.000 0.00 0.00 0.00 3.61
3710 4332 2.583472 GGGCTTCATCCCTTGTTGG 58.417 57.895 0.00 0.00 43.13 3.77
3717 4339 1.411041 ACGTACTAGGGCTTCATCCC 58.589 55.000 0.00 0.00 46.93 3.85
3718 4340 2.543238 CGAACGTACTAGGGCTTCATCC 60.543 54.545 0.00 0.00 0.00 3.51
3719 4341 2.357009 TCGAACGTACTAGGGCTTCATC 59.643 50.000 0.00 0.00 0.00 2.92
3720 4342 2.372264 TCGAACGTACTAGGGCTTCAT 58.628 47.619 0.00 0.00 0.00 2.57
3721 4343 1.825090 TCGAACGTACTAGGGCTTCA 58.175 50.000 0.00 0.00 0.00 3.02
3722 4344 3.304324 GGTATCGAACGTACTAGGGCTTC 60.304 52.174 0.00 0.00 0.00 3.86
3723 4345 2.620585 GGTATCGAACGTACTAGGGCTT 59.379 50.000 0.00 0.00 0.00 4.35
3724 4346 2.225467 GGTATCGAACGTACTAGGGCT 58.775 52.381 0.00 0.00 0.00 5.19
3725 4347 1.268079 GGGTATCGAACGTACTAGGGC 59.732 57.143 0.00 0.00 0.00 5.19
3726 4348 1.882623 GGGGTATCGAACGTACTAGGG 59.117 57.143 0.00 0.00 0.00 3.53
3727 4349 1.532868 CGGGGTATCGAACGTACTAGG 59.467 57.143 0.00 0.00 0.00 3.02
3728 4350 1.069636 GCGGGGTATCGAACGTACTAG 60.070 57.143 0.00 0.00 0.00 2.57
3729 4351 0.944386 GCGGGGTATCGAACGTACTA 59.056 55.000 0.00 0.00 0.00 1.82
3730 4352 1.728490 GGCGGGGTATCGAACGTACT 61.728 60.000 0.00 0.00 0.00 2.73
3731 4353 1.299392 GGCGGGGTATCGAACGTAC 60.299 63.158 0.00 0.00 0.00 3.67
3732 4354 0.179032 TAGGCGGGGTATCGAACGTA 60.179 55.000 0.00 0.00 0.00 3.57
3733 4355 0.825010 ATAGGCGGGGTATCGAACGT 60.825 55.000 0.00 0.00 0.00 3.99
3734 4356 0.388134 CATAGGCGGGGTATCGAACG 60.388 60.000 0.00 0.00 0.00 3.95
3735 4357 0.677842 ACATAGGCGGGGTATCGAAC 59.322 55.000 0.00 0.00 0.00 3.95
3736 4358 0.963962 GACATAGGCGGGGTATCGAA 59.036 55.000 0.00 0.00 0.00 3.71
3737 4359 1.239296 CGACATAGGCGGGGTATCGA 61.239 60.000 0.00 0.00 0.00 3.59
3738 4360 1.211969 CGACATAGGCGGGGTATCG 59.788 63.158 0.00 0.00 0.00 2.92
3739 4361 0.243095 GTCGACATAGGCGGGGTATC 59.757 60.000 11.55 0.00 0.00 2.24
3740 4362 0.468585 TGTCGACATAGGCGGGGTAT 60.469 55.000 15.76 0.00 0.00 2.73
3741 4363 1.076850 TGTCGACATAGGCGGGGTA 60.077 57.895 15.76 0.00 0.00 3.69
3742 4364 2.363276 TGTCGACATAGGCGGGGT 60.363 61.111 15.76 0.00 0.00 4.95
3743 4365 2.417516 CTGTCGACATAGGCGGGG 59.582 66.667 20.40 0.14 0.00 5.73
3744 4366 2.279517 GCTGTCGACATAGGCGGG 60.280 66.667 20.40 6.52 0.00 6.13
3745 4367 2.655364 CGCTGTCGACATAGGCGG 60.655 66.667 31.42 18.65 41.77 6.13
3746 4368 1.655654 CTCGCTGTCGACATAGGCG 60.656 63.158 32.53 32.53 45.93 5.52
3747 4369 1.299468 CCTCGCTGTCGACATAGGC 60.299 63.158 20.40 17.86 40.21 3.93
3748 4370 1.299468 GCCTCGCTGTCGACATAGG 60.299 63.158 26.01 26.01 40.21 2.57
3749 4371 1.299468 GGCCTCGCTGTCGACATAG 60.299 63.158 20.40 15.74 40.21 2.23
3750 4372 0.464916 TAGGCCTCGCTGTCGACATA 60.465 55.000 20.40 6.96 40.21 2.29
3751 4373 1.109920 ATAGGCCTCGCTGTCGACAT 61.110 55.000 20.40 3.80 40.21 3.06
3752 4374 1.753078 ATAGGCCTCGCTGTCGACA 60.753 57.895 18.88 18.88 40.21 4.35
3753 4375 1.299468 CATAGGCCTCGCTGTCGAC 60.299 63.158 9.68 9.11 40.21 4.20
3754 4376 2.490148 CCATAGGCCTCGCTGTCGA 61.490 63.158 9.68 0.00 43.28 4.20
3755 4377 2.028190 CCATAGGCCTCGCTGTCG 59.972 66.667 9.68 0.00 0.00 4.35
3756 4378 1.227380 CACCATAGGCCTCGCTGTC 60.227 63.158 9.68 0.00 0.00 3.51
3757 4379 1.685765 TCACCATAGGCCTCGCTGT 60.686 57.895 9.68 0.00 0.00 4.40
3758 4380 1.227380 GTCACCATAGGCCTCGCTG 60.227 63.158 9.68 5.63 0.00 5.18
3759 4381 0.978146 AAGTCACCATAGGCCTCGCT 60.978 55.000 9.68 0.00 0.00 4.93
3760 4382 0.107654 AAAGTCACCATAGGCCTCGC 60.108 55.000 9.68 0.00 0.00 5.03
3761 4383 1.066143 ACAAAGTCACCATAGGCCTCG 60.066 52.381 9.68 0.55 0.00 4.63
3762 4384 2.027192 TGACAAAGTCACCATAGGCCTC 60.027 50.000 9.68 0.00 37.67 4.70
3763 4385 1.985159 TGACAAAGTCACCATAGGCCT 59.015 47.619 11.78 11.78 37.67 5.19
3764 4386 2.489938 TGACAAAGTCACCATAGGCC 57.510 50.000 0.00 0.00 37.67 5.19
3765 4387 3.378427 GGATTGACAAAGTCACCATAGGC 59.622 47.826 0.00 0.00 42.60 3.93
3766 4388 4.637534 CAGGATTGACAAAGTCACCATAGG 59.362 45.833 0.00 0.00 42.60 2.57
3767 4389 5.491070 TCAGGATTGACAAAGTCACCATAG 58.509 41.667 0.00 0.00 42.60 2.23
3768 4390 5.491070 CTCAGGATTGACAAAGTCACCATA 58.509 41.667 0.00 0.00 42.60 2.74
3769 4391 4.330250 CTCAGGATTGACAAAGTCACCAT 58.670 43.478 0.00 0.00 42.60 3.55
3770 4392 3.496692 CCTCAGGATTGACAAAGTCACCA 60.497 47.826 0.00 0.00 42.60 4.17
3771 4393 3.077359 CCTCAGGATTGACAAAGTCACC 58.923 50.000 0.00 0.00 42.60 4.02
3772 4394 3.077359 CCCTCAGGATTGACAAAGTCAC 58.923 50.000 0.00 0.00 37.58 3.67
3773 4395 2.711009 ACCCTCAGGATTGACAAAGTCA 59.289 45.455 0.00 0.00 37.58 3.41
3774 4396 3.425162 ACCCTCAGGATTGACAAAGTC 57.575 47.619 0.00 0.00 36.73 3.01
3775 4397 3.884037 AACCCTCAGGATTGACAAAGT 57.116 42.857 0.00 0.00 36.73 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.