Multiple sequence alignment - TraesCS6A01G360800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G360800 chr6A 100.000 2282 0 0 1 2282 591725345 591727626 0.000000e+00 4215.0
1 TraesCS6A01G360800 chr6A 99.128 344 3 0 1 344 591703171 591703514 8.950000e-174 619.0
2 TraesCS6A01G360800 chr6D 93.174 835 44 7 476 1309 444094174 444094996 0.000000e+00 1214.0
3 TraesCS6A01G360800 chr6D 87.719 285 18 7 1358 1637 444130717 444130989 1.320000e-82 316.0
4 TraesCS6A01G360800 chr6D 94.574 129 4 3 349 476 444426350 444426476 1.790000e-46 196.0
5 TraesCS6A01G360800 chr6D 91.549 142 8 3 344 483 362767999 362768138 2.310000e-45 193.0
6 TraesCS6A01G360800 chr6D 88.618 123 4 7 2160 2282 444131526 444131638 8.500000e-30 141.0
7 TraesCS6A01G360800 chr6D 87.500 112 7 4 1990 2101 444131402 444131506 3.080000e-24 122.0
8 TraesCS6A01G360800 chr2A 91.393 488 30 9 1 479 543804877 543804393 0.000000e+00 658.0
9 TraesCS6A01G360800 chr2A 97.167 353 8 2 1 353 619836505 619836855 1.510000e-166 595.0
10 TraesCS6A01G360800 chr4A 98.547 344 5 0 1 344 29213522 29213865 1.940000e-170 608.0
11 TraesCS6A01G360800 chr5A 97.714 350 8 0 1 350 470060735 470061084 9.020000e-169 603.0
12 TraesCS6A01G360800 chr5A 91.971 137 9 2 349 484 521948514 521948379 8.320000e-45 191.0
13 TraesCS6A01G360800 chr1A 98.256 344 6 0 1 344 62652346 62652689 9.020000e-169 603.0
14 TraesCS6A01G360800 chr1A 98.256 344 6 0 1 344 203306804 203306461 9.020000e-169 603.0
15 TraesCS6A01G360800 chr1A 96.910 356 10 1 1 356 311828458 311828104 1.510000e-166 595.0
16 TraesCS6A01G360800 chr7A 97.167 353 10 0 1 353 555611304 555611656 4.200000e-167 597.0
17 TraesCS6A01G360800 chr7A 79.946 369 55 13 473 829 105517655 105518016 1.050000e-63 254.0
18 TraesCS6A01G360800 chr6B 83.784 333 23 13 1361 1677 668770985 668771302 1.030000e-73 287.0
19 TraesCS6A01G360800 chr6B 85.284 299 14 13 1990 2282 668771683 668771957 4.800000e-72 281.0
20 TraesCS6A01G360800 chr6B 84.979 233 33 2 473 705 668769275 668769505 3.790000e-58 235.0
21 TraesCS6A01G360800 chr6B 92.029 138 8 2 350 485 347653351 347653487 8.320000e-45 191.0
22 TraesCS6A01G360800 chr6B 81.481 243 20 12 1768 1992 668771415 668771650 2.330000e-40 176.0
23 TraesCS6A01G360800 chr6B 82.051 195 30 4 580 773 668768988 668769178 6.520000e-36 161.0
24 TraesCS6A01G360800 chr3D 84.175 297 40 7 473 764 155691945 155692239 4.800000e-72 281.0
25 TraesCS6A01G360800 chr3D 82.051 195 29 6 577 769 155692449 155692639 6.520000e-36 161.0
26 TraesCS6A01G360800 chr7D 93.939 132 4 4 349 479 294052473 294052345 1.790000e-46 196.0
27 TraesCS6A01G360800 chr2D 91.608 143 9 2 344 484 604732900 604733041 6.430000e-46 195.0
28 TraesCS6A01G360800 chr2D 86.420 162 16 3 473 631 55268524 55268682 3.010000e-39 172.0
29 TraesCS6A01G360800 chr3A 91.549 142 8 3 344 482 54122804 54122944 2.310000e-45 193.0
30 TraesCS6A01G360800 chr3A 85.714 154 17 4 621 772 174947431 174947581 8.440000e-35 158.0
31 TraesCS6A01G360800 chr3B 91.971 137 9 2 344 479 462416748 462416613 8.320000e-45 191.0
32 TraesCS6A01G360800 chr7B 79.741 232 40 6 476 702 537382942 537382713 6.520000e-36 161.0
33 TraesCS6A01G360800 chr4D 82.123 179 29 3 598 773 342897150 342896972 1.410000e-32 150.0
34 TraesCS6A01G360800 chr4B 81.006 179 30 4 598 773 424828088 424827911 3.060000e-29 139.0
35 TraesCS6A01G360800 chr4B 97.059 34 1 0 793 826 424828209 424828176 8.800000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G360800 chr6A 591725345 591727626 2281 False 4215 4215 100.0000 1 2282 1 chr6A.!!$F2 2281
1 TraesCS6A01G360800 chr6D 444094174 444094996 822 False 1214 1214 93.1740 476 1309 1 chr6D.!!$F2 833
2 TraesCS6A01G360800 chr6B 668768988 668771957 2969 False 228 287 83.5158 473 2282 5 chr6B.!!$F2 1809
3 TraesCS6A01G360800 chr3D 155691945 155692639 694 False 221 281 83.1130 473 769 2 chr3D.!!$F1 296

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
420 421 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.0 3.79 3.79 38.76 3.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1347 2634 0.102481 CTCGACCATCCAACGGGTAG 59.898 60.0 0.0 0.0 37.57 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.750125 TCACAGTCATATGAACATGTATTAGTC 57.250 33.333 7.07 0.00 0.00 2.59
27 28 9.533253 CACAGTCATATGAACATGTATTAGTCA 57.467 33.333 7.07 0.00 0.00 3.41
37 38 8.668353 TGAACATGTATTAGTCATGAAGAAAGC 58.332 33.333 0.00 0.00 43.47 3.51
38 39 8.565896 AACATGTATTAGTCATGAAGAAAGCA 57.434 30.769 0.00 0.00 43.47 3.91
40 41 9.182214 ACATGTATTAGTCATGAAGAAAGCAAT 57.818 29.630 11.92 0.00 43.47 3.56
43 44 8.830580 TGTATTAGTCATGAAGAAAGCAATAGC 58.169 33.333 0.00 0.00 42.56 2.97
45 46 7.686438 TTAGTCATGAAGAAAGCAATAGCAA 57.314 32.000 0.00 0.00 45.49 3.91
46 47 5.947443 AGTCATGAAGAAAGCAATAGCAAC 58.053 37.500 0.00 0.00 45.49 4.17
47 48 5.474532 AGTCATGAAGAAAGCAATAGCAACA 59.525 36.000 0.00 0.00 45.49 3.33
48 49 6.152323 AGTCATGAAGAAAGCAATAGCAACAT 59.848 34.615 0.00 0.00 45.49 2.71
49 50 7.337689 AGTCATGAAGAAAGCAATAGCAACATA 59.662 33.333 0.00 0.00 45.49 2.29
51 52 7.337689 TCATGAAGAAAGCAATAGCAACATACT 59.662 33.333 0.00 0.00 45.49 2.12
52 53 8.615211 CATGAAGAAAGCAATAGCAACATACTA 58.385 33.333 0.00 0.00 45.49 1.82
53 54 8.560355 TGAAGAAAGCAATAGCAACATACTAA 57.440 30.769 0.00 0.00 45.49 2.24
54 55 9.008965 TGAAGAAAGCAATAGCAACATACTAAA 57.991 29.630 0.00 0.00 45.49 1.85
56 57 7.464358 AGAAAGCAATAGCAACATACTAAACG 58.536 34.615 0.00 0.00 45.49 3.60
57 58 6.978343 AAGCAATAGCAACATACTAAACGA 57.022 33.333 0.00 0.00 45.49 3.85
58 59 7.553881 AAGCAATAGCAACATACTAAACGAT 57.446 32.000 0.00 0.00 45.49 3.73
59 60 7.178712 AGCAATAGCAACATACTAAACGATC 57.821 36.000 0.00 0.00 45.49 3.69
60 61 6.065153 GCAATAGCAACATACTAAACGATCG 58.935 40.000 14.88 14.88 41.58 3.69
61 62 6.074516 GCAATAGCAACATACTAAACGATCGA 60.075 38.462 24.34 0.00 41.58 3.59
62 63 7.494130 CAATAGCAACATACTAAACGATCGAG 58.506 38.462 24.34 11.61 0.00 4.04
63 64 4.995124 AGCAACATACTAAACGATCGAGT 58.005 39.130 24.34 17.16 0.00 4.18
64 65 4.798907 AGCAACATACTAAACGATCGAGTG 59.201 41.667 24.34 10.96 0.00 3.51
65 66 4.548346 GCAACATACTAAACGATCGAGTGC 60.548 45.833 24.34 10.18 0.00 4.40
66 67 4.634184 ACATACTAAACGATCGAGTGCT 57.366 40.909 24.34 4.50 0.00 4.40
67 68 5.746307 ACATACTAAACGATCGAGTGCTA 57.254 39.130 24.34 5.62 0.00 3.49
69 70 6.200100 ACATACTAAACGATCGAGTGCTAAG 58.800 40.000 24.34 10.81 0.00 2.18
70 71 3.436496 ACTAAACGATCGAGTGCTAAGC 58.564 45.455 24.34 0.00 0.00 3.09
72 73 3.777465 AAACGATCGAGTGCTAAGCTA 57.223 42.857 24.34 0.00 0.00 3.32
73 74 3.777465 AACGATCGAGTGCTAAGCTAA 57.223 42.857 24.34 0.00 0.00 3.09
74 75 3.067721 ACGATCGAGTGCTAAGCTAAC 57.932 47.619 24.34 0.00 0.00 2.34
75 76 2.037649 CGATCGAGTGCTAAGCTAACG 58.962 52.381 10.26 0.00 0.00 3.18
76 77 2.386249 GATCGAGTGCTAAGCTAACGG 58.614 52.381 0.00 0.00 0.00 4.44
78 79 1.814394 TCGAGTGCTAAGCTAACGGAA 59.186 47.619 0.00 0.00 0.00 4.30
79 80 2.426024 TCGAGTGCTAAGCTAACGGAAT 59.574 45.455 0.00 0.00 0.00 3.01
80 81 2.535984 CGAGTGCTAAGCTAACGGAATG 59.464 50.000 0.00 0.00 0.00 2.67
81 82 2.866762 GAGTGCTAAGCTAACGGAATGG 59.133 50.000 0.00 0.00 0.00 3.16
83 84 1.557832 TGCTAAGCTAACGGAATGGGT 59.442 47.619 0.00 0.00 0.00 4.51
84 85 2.210961 GCTAAGCTAACGGAATGGGTC 58.789 52.381 0.00 0.00 0.00 4.46
87 88 2.403252 AGCTAACGGAATGGGTCAAG 57.597 50.000 0.00 0.00 0.00 3.02
88 89 1.628846 AGCTAACGGAATGGGTCAAGT 59.371 47.619 0.00 0.00 0.00 3.16
89 90 2.007608 GCTAACGGAATGGGTCAAGTC 58.992 52.381 0.00 0.00 0.00 3.01
90 91 2.614481 GCTAACGGAATGGGTCAAGTCA 60.614 50.000 0.00 0.00 0.00 3.41
91 92 2.649531 AACGGAATGGGTCAAGTCAA 57.350 45.000 0.00 0.00 0.00 3.18
92 93 2.879103 ACGGAATGGGTCAAGTCAAT 57.121 45.000 0.00 0.00 0.00 2.57
93 94 2.711542 ACGGAATGGGTCAAGTCAATC 58.288 47.619 0.00 0.00 0.00 2.67
94 95 2.039746 ACGGAATGGGTCAAGTCAATCA 59.960 45.455 0.00 0.00 0.00 2.57
95 96 2.420022 CGGAATGGGTCAAGTCAATCAC 59.580 50.000 0.00 0.00 0.00 3.06
97 98 4.019174 GGAATGGGTCAAGTCAATCACAT 58.981 43.478 0.00 0.00 0.00 3.21
98 99 4.096984 GGAATGGGTCAAGTCAATCACATC 59.903 45.833 0.00 0.00 0.00 3.06
99 100 3.786368 TGGGTCAAGTCAATCACATCA 57.214 42.857 0.00 0.00 0.00 3.07
101 102 4.665451 TGGGTCAAGTCAATCACATCATT 58.335 39.130 0.00 0.00 0.00 2.57
103 104 4.946157 GGGTCAAGTCAATCACATCATTCT 59.054 41.667 0.00 0.00 0.00 2.40
104 105 5.065731 GGGTCAAGTCAATCACATCATTCTC 59.934 44.000 0.00 0.00 0.00 2.87
105 106 5.065731 GGTCAAGTCAATCACATCATTCTCC 59.934 44.000 0.00 0.00 0.00 3.71
106 107 5.879223 GTCAAGTCAATCACATCATTCTCCT 59.121 40.000 0.00 0.00 0.00 3.69
107 108 7.044181 GTCAAGTCAATCACATCATTCTCCTA 58.956 38.462 0.00 0.00 0.00 2.94
108 109 7.550551 GTCAAGTCAATCACATCATTCTCCTAA 59.449 37.037 0.00 0.00 0.00 2.69
109 110 8.270030 TCAAGTCAATCACATCATTCTCCTAAT 58.730 33.333 0.00 0.00 0.00 1.73
110 111 8.343366 CAAGTCAATCACATCATTCTCCTAATG 58.657 37.037 0.00 0.00 0.00 1.90
120 121 6.119240 TCATTCTCCTAATGATGTGATCCC 57.881 41.667 0.00 0.00 32.21 3.85
121 122 4.607293 TTCTCCTAATGATGTGATCCCG 57.393 45.455 0.00 0.00 0.00 5.14
122 123 3.576861 TCTCCTAATGATGTGATCCCGT 58.423 45.455 0.00 0.00 0.00 5.28
123 124 3.967326 TCTCCTAATGATGTGATCCCGTT 59.033 43.478 0.00 0.00 0.00 4.44
125 126 5.600898 TCTCCTAATGATGTGATCCCGTTAA 59.399 40.000 0.00 0.00 0.00 2.01
126 127 6.270000 TCTCCTAATGATGTGATCCCGTTAAT 59.730 38.462 0.00 0.00 0.00 1.40
128 129 6.042666 TCCTAATGATGTGATCCCGTTAATCA 59.957 38.462 0.00 0.00 0.00 2.57
130 131 7.228507 CCTAATGATGTGATCCCGTTAATCAAA 59.771 37.037 0.00 0.00 35.04 2.69
131 132 7.587037 AATGATGTGATCCCGTTAATCAAAT 57.413 32.000 0.00 0.00 34.46 2.32
133 134 8.690203 ATGATGTGATCCCGTTAATCAAATAA 57.310 30.769 0.00 0.00 32.39 1.40
135 136 7.554476 TGATGTGATCCCGTTAATCAAATAACA 59.446 33.333 0.00 0.00 32.39 2.41
137 138 7.531716 TGTGATCCCGTTAATCAAATAACAAC 58.468 34.615 0.00 0.00 35.89 3.32
138 139 7.392113 TGTGATCCCGTTAATCAAATAACAACT 59.608 33.333 0.00 0.00 35.89 3.16
139 140 7.908601 GTGATCCCGTTAATCAAATAACAACTC 59.091 37.037 0.00 0.00 35.89 3.01
140 141 7.827236 TGATCCCGTTAATCAAATAACAACTCT 59.173 33.333 0.00 0.00 35.89 3.24
141 142 7.989416 TCCCGTTAATCAAATAACAACTCTT 57.011 32.000 0.00 0.00 35.89 2.85
143 144 8.293867 TCCCGTTAATCAAATAACAACTCTTTG 58.706 33.333 0.00 0.00 35.89 2.77
145 146 9.113876 CCGTTAATCAAATAACAACTCTTTGTC 57.886 33.333 0.00 0.00 45.69 3.18
146 147 9.878599 CGTTAATCAAATAACAACTCTTTGTCT 57.121 29.630 0.00 0.00 45.69 3.41
151 152 8.918202 TCAAATAACAACTCTTTGTCTATGGT 57.082 30.769 0.00 0.00 45.69 3.55
152 153 9.349713 TCAAATAACAACTCTTTGTCTATGGTT 57.650 29.630 0.00 0.00 45.69 3.67
155 156 9.449719 AATAACAACTCTTTGTCTATGGTTAGG 57.550 33.333 0.00 0.00 45.69 2.69
156 157 6.681729 ACAACTCTTTGTCTATGGTTAGGA 57.318 37.500 0.00 0.00 42.67 2.94
157 158 7.074653 ACAACTCTTTGTCTATGGTTAGGAA 57.925 36.000 0.00 0.00 42.67 3.36
158 159 7.514721 ACAACTCTTTGTCTATGGTTAGGAAA 58.485 34.615 0.00 0.00 42.67 3.13
159 160 7.444487 ACAACTCTTTGTCTATGGTTAGGAAAC 59.556 37.037 0.00 0.00 42.67 2.78
160 161 7.074653 ACTCTTTGTCTATGGTTAGGAAACA 57.925 36.000 0.00 0.00 37.34 2.83
161 162 7.690256 ACTCTTTGTCTATGGTTAGGAAACAT 58.310 34.615 0.00 0.00 37.34 2.71
164 165 9.444600 TCTTTGTCTATGGTTAGGAAACATAAC 57.555 33.333 0.00 0.00 37.34 1.89
179 180 8.458843 AGGAAACATAACCATCTTTGATTAACG 58.541 33.333 0.00 0.00 0.00 3.18
180 181 8.455682 GGAAACATAACCATCTTTGATTAACGA 58.544 33.333 0.00 0.00 0.00 3.85
181 182 9.490663 GAAACATAACCATCTTTGATTAACGAG 57.509 33.333 0.00 0.00 0.00 4.18
182 183 7.016361 ACATAACCATCTTTGATTAACGAGC 57.984 36.000 0.00 0.00 0.00 5.03
183 184 6.823689 ACATAACCATCTTTGATTAACGAGCT 59.176 34.615 0.00 0.00 0.00 4.09
185 186 6.910536 AACCATCTTTGATTAACGAGCTAG 57.089 37.500 0.00 0.00 0.00 3.42
186 187 5.978814 ACCATCTTTGATTAACGAGCTAGT 58.021 37.500 0.00 0.00 0.00 2.57
187 188 6.043411 ACCATCTTTGATTAACGAGCTAGTC 58.957 40.000 0.00 0.00 0.00 2.59
190 191 7.254252 CCATCTTTGATTAACGAGCTAGTCAAG 60.254 40.741 0.00 0.00 31.56 3.02
192 193 7.823665 TCTTTGATTAACGAGCTAGTCAAGTA 58.176 34.615 0.00 0.00 31.56 2.24
193 194 7.968956 TCTTTGATTAACGAGCTAGTCAAGTAG 59.031 37.037 0.00 0.00 31.56 2.57
195 196 7.017498 TGATTAACGAGCTAGTCAAGTAGAG 57.983 40.000 0.00 0.00 0.00 2.43
196 197 5.814764 TTAACGAGCTAGTCAAGTAGAGG 57.185 43.478 0.00 0.00 0.00 3.69
197 198 2.018515 ACGAGCTAGTCAAGTAGAGGC 58.981 52.381 0.00 0.00 0.00 4.70
198 199 2.017782 CGAGCTAGTCAAGTAGAGGCA 58.982 52.381 0.00 0.00 0.00 4.75
200 201 3.815962 CGAGCTAGTCAAGTAGAGGCATA 59.184 47.826 0.00 0.00 0.00 3.14
201 202 4.319911 CGAGCTAGTCAAGTAGAGGCATAC 60.320 50.000 0.00 0.00 0.00 2.39
203 204 5.942961 AGCTAGTCAAGTAGAGGCATACTA 58.057 41.667 3.23 0.00 34.90 1.82
204 205 5.766174 AGCTAGTCAAGTAGAGGCATACTAC 59.234 44.000 3.23 5.82 40.04 2.73
206 207 6.293735 GCTAGTCAAGTAGAGGCATACTACTG 60.294 46.154 15.68 7.26 46.29 2.74
207 208 5.756918 AGTCAAGTAGAGGCATACTACTGA 58.243 41.667 15.68 8.97 46.29 3.41
208 209 5.591067 AGTCAAGTAGAGGCATACTACTGAC 59.409 44.000 17.97 17.97 46.29 3.51
209 210 5.357314 GTCAAGTAGAGGCATACTACTGACA 59.643 44.000 19.41 8.04 46.29 3.58
210 211 5.357314 TCAAGTAGAGGCATACTACTGACAC 59.643 44.000 15.68 0.00 46.29 3.67
211 212 5.118729 AGTAGAGGCATACTACTGACACT 57.881 43.478 14.71 0.00 45.59 3.55
212 213 5.127491 AGTAGAGGCATACTACTGACACTC 58.873 45.833 14.71 0.00 45.59 3.51
213 214 4.243793 AGAGGCATACTACTGACACTCT 57.756 45.455 0.00 0.00 0.00 3.24
215 216 3.697045 GAGGCATACTACTGACACTCTGT 59.303 47.826 0.00 0.00 33.13 3.41
216 217 4.090090 AGGCATACTACTGACACTCTGTT 58.910 43.478 0.00 0.00 31.00 3.16
217 218 4.528596 AGGCATACTACTGACACTCTGTTT 59.471 41.667 0.00 0.00 31.00 2.83
219 220 5.230942 GCATACTACTGACACTCTGTTTGT 58.769 41.667 0.00 0.00 31.00 2.83
220 221 5.346281 GCATACTACTGACACTCTGTTTGTC 59.654 44.000 0.00 0.00 43.22 3.18
221 222 6.682746 CATACTACTGACACTCTGTTTGTCT 58.317 40.000 11.01 0.00 43.30 3.41
223 224 6.902771 ACTACTGACACTCTGTTTGTCTAT 57.097 37.500 11.01 4.29 43.30 1.98
224 225 6.682746 ACTACTGACACTCTGTTTGTCTATG 58.317 40.000 11.01 5.93 43.30 2.23
226 227 6.650427 ACTGACACTCTGTTTGTCTATGTA 57.350 37.500 11.01 0.00 43.30 2.29
227 228 7.233389 ACTGACACTCTGTTTGTCTATGTAT 57.767 36.000 11.01 0.00 43.30 2.29
228 229 7.671302 ACTGACACTCTGTTTGTCTATGTATT 58.329 34.615 11.01 0.00 43.30 1.89
231 232 7.598869 TGACACTCTGTTTGTCTATGTATTCAC 59.401 37.037 11.01 0.00 43.30 3.18
232 233 7.441836 ACACTCTGTTTGTCTATGTATTCACA 58.558 34.615 0.00 0.00 39.52 3.58
233 234 7.385205 ACACTCTGTTTGTCTATGTATTCACAC 59.615 37.037 0.00 0.00 37.54 3.82
234 235 7.384932 CACTCTGTTTGTCTATGTATTCACACA 59.615 37.037 0.00 0.00 37.54 3.72
235 236 8.097038 ACTCTGTTTGTCTATGTATTCACACAT 58.903 33.333 0.00 0.00 41.88 3.21
236 237 8.255394 TCTGTTTGTCTATGTATTCACACATG 57.745 34.615 0.00 0.00 39.46 3.21
237 238 7.877612 TCTGTTTGTCTATGTATTCACACATGT 59.122 33.333 0.00 0.00 39.46 3.21
238 239 9.150348 CTGTTTGTCTATGTATTCACACATGTA 57.850 33.333 0.00 0.00 39.46 2.29
239 240 9.665719 TGTTTGTCTATGTATTCACACATGTAT 57.334 29.630 0.00 0.00 39.46 2.29
249 250 9.454859 TGTATTCACACATGTATTATGTTTCCA 57.545 29.630 0.00 0.00 0.00 3.53
250 251 9.935682 GTATTCACACATGTATTATGTTTCCAG 57.064 33.333 0.00 0.00 0.00 3.86
251 252 7.994425 TTCACACATGTATTATGTTTCCAGT 57.006 32.000 0.00 0.00 0.00 4.00
252 253 7.994425 TCACACATGTATTATGTTTCCAGTT 57.006 32.000 0.00 0.00 0.00 3.16
253 254 9.508642 TTCACACATGTATTATGTTTCCAGTTA 57.491 29.630 0.00 0.00 0.00 2.24
254 255 9.508642 TCACACATGTATTATGTTTCCAGTTAA 57.491 29.630 0.00 0.00 0.00 2.01
268 269 9.461312 TGTTTCCAGTTAATACAATTCTAGCAT 57.539 29.630 0.00 0.00 0.00 3.79
269 270 9.722056 GTTTCCAGTTAATACAATTCTAGCATG 57.278 33.333 0.00 0.00 0.00 4.06
270 271 9.679661 TTTCCAGTTAATACAATTCTAGCATGA 57.320 29.630 0.00 0.00 0.00 3.07
271 272 9.679661 TTCCAGTTAATACAATTCTAGCATGAA 57.320 29.630 0.00 0.00 0.00 2.57
272 273 9.851686 TCCAGTTAATACAATTCTAGCATGAAT 57.148 29.630 0.00 0.00 38.19 2.57
331 332 8.637196 AATAACTTTATTATTGCCTCTAGGGC 57.363 34.615 13.60 13.60 44.71 5.19
343 344 4.982241 CCTCTAGGGCATATTTCCTTCA 57.018 45.455 0.00 0.00 34.75 3.02
344 345 4.646572 CCTCTAGGGCATATTTCCTTCAC 58.353 47.826 0.00 0.00 34.75 3.18
345 346 4.505742 CCTCTAGGGCATATTTCCTTCACC 60.506 50.000 0.00 0.00 34.75 4.02
346 347 4.307259 TCTAGGGCATATTTCCTTCACCT 58.693 43.478 0.00 0.00 34.75 4.00
347 348 4.726825 TCTAGGGCATATTTCCTTCACCTT 59.273 41.667 0.00 0.00 34.75 3.50
348 349 3.635591 AGGGCATATTTCCTTCACCTTG 58.364 45.455 0.00 0.00 0.00 3.61
349 350 3.011708 AGGGCATATTTCCTTCACCTTGT 59.988 43.478 0.00 0.00 0.00 3.16
350 351 3.769300 GGGCATATTTCCTTCACCTTGTT 59.231 43.478 0.00 0.00 0.00 2.83
351 352 4.381932 GGGCATATTTCCTTCACCTTGTTG 60.382 45.833 0.00 0.00 0.00 3.33
352 353 4.220602 GGCATATTTCCTTCACCTTGTTGT 59.779 41.667 0.00 0.00 0.00 3.32
353 354 5.402398 GCATATTTCCTTCACCTTGTTGTC 58.598 41.667 0.00 0.00 0.00 3.18
354 355 5.048083 GCATATTTCCTTCACCTTGTTGTCA 60.048 40.000 0.00 0.00 0.00 3.58
355 356 6.350445 GCATATTTCCTTCACCTTGTTGTCAT 60.350 38.462 0.00 0.00 0.00 3.06
356 357 7.148086 GCATATTTCCTTCACCTTGTTGTCATA 60.148 37.037 0.00 0.00 0.00 2.15
357 358 8.739039 CATATTTCCTTCACCTTGTTGTCATAA 58.261 33.333 0.00 0.00 0.00 1.90
358 359 7.781324 ATTTCCTTCACCTTGTTGTCATAAT 57.219 32.000 0.00 0.00 0.00 1.28
359 360 8.877864 ATTTCCTTCACCTTGTTGTCATAATA 57.122 30.769 0.00 0.00 0.00 0.98
360 361 7.681939 TTCCTTCACCTTGTTGTCATAATAC 57.318 36.000 0.00 0.00 0.00 1.89
361 362 7.016153 TCCTTCACCTTGTTGTCATAATACT 57.984 36.000 0.00 0.00 0.00 2.12
362 363 7.458397 TCCTTCACCTTGTTGTCATAATACTT 58.542 34.615 0.00 0.00 0.00 2.24
363 364 7.942341 TCCTTCACCTTGTTGTCATAATACTTT 59.058 33.333 0.00 0.00 0.00 2.66
364 365 8.237267 CCTTCACCTTGTTGTCATAATACTTTC 58.763 37.037 0.00 0.00 0.00 2.62
365 366 7.359262 TCACCTTGTTGTCATAATACTTTCG 57.641 36.000 0.00 0.00 0.00 3.46
366 367 6.021596 CACCTTGTTGTCATAATACTTTCGC 58.978 40.000 0.00 0.00 0.00 4.70
367 368 5.938125 ACCTTGTTGTCATAATACTTTCGCT 59.062 36.000 0.00 0.00 0.00 4.93
368 369 6.430000 ACCTTGTTGTCATAATACTTTCGCTT 59.570 34.615 0.00 0.00 0.00 4.68
369 370 7.604927 ACCTTGTTGTCATAATACTTTCGCTTA 59.395 33.333 0.00 0.00 0.00 3.09
370 371 7.903431 CCTTGTTGTCATAATACTTTCGCTTAC 59.097 37.037 0.00 0.00 0.00 2.34
371 372 6.985013 TGTTGTCATAATACTTTCGCTTACG 58.015 36.000 0.00 0.00 42.01 3.18
372 373 6.035220 TGTTGTCATAATACTTTCGCTTACGG 59.965 38.462 0.00 0.00 40.63 4.02
373 374 5.653507 TGTCATAATACTTTCGCTTACGGT 58.346 37.500 0.00 0.00 40.63 4.83
374 375 5.745294 TGTCATAATACTTTCGCTTACGGTC 59.255 40.000 0.00 0.00 40.63 4.79
375 376 5.975939 GTCATAATACTTTCGCTTACGGTCT 59.024 40.000 0.00 0.00 40.63 3.85
376 377 7.134815 GTCATAATACTTTCGCTTACGGTCTA 58.865 38.462 0.00 0.00 40.63 2.59
377 378 7.112705 GTCATAATACTTTCGCTTACGGTCTAC 59.887 40.741 0.00 0.00 40.63 2.59
389 390 2.101700 GGTCTACGAGGGTACGTGG 58.898 63.158 0.00 0.00 46.02 4.94
391 392 3.159298 TCTACGAGGGTACGTGGAC 57.841 57.895 0.00 0.00 45.53 4.02
392 393 0.324614 TCTACGAGGGTACGTGGACA 59.675 55.000 0.00 0.00 45.53 4.02
393 394 1.167851 CTACGAGGGTACGTGGACAA 58.832 55.000 0.00 0.00 44.98 3.18
394 395 0.881118 TACGAGGGTACGTGGACAAC 59.119 55.000 0.00 0.00 46.02 3.32
395 396 1.108727 ACGAGGGTACGTGGACAACA 61.109 55.000 0.00 0.00 44.84 3.33
396 397 0.665369 CGAGGGTACGTGGACAACAC 60.665 60.000 0.00 0.00 46.78 3.32
404 405 3.324207 GTGGACAACACTCTTCCCC 57.676 57.895 0.00 0.00 46.72 4.81
405 406 0.765510 GTGGACAACACTCTTCCCCT 59.234 55.000 0.00 0.00 46.72 4.79
406 407 1.056660 TGGACAACACTCTTCCCCTC 58.943 55.000 0.00 0.00 0.00 4.30
407 408 1.353091 GGACAACACTCTTCCCCTCT 58.647 55.000 0.00 0.00 0.00 3.69
408 409 1.276705 GGACAACACTCTTCCCCTCTC 59.723 57.143 0.00 0.00 0.00 3.20
409 410 0.969894 ACAACACTCTTCCCCTCTCG 59.030 55.000 0.00 0.00 0.00 4.04
410 411 0.969894 CAACACTCTTCCCCTCTCGT 59.030 55.000 0.00 0.00 0.00 4.18
411 412 1.344763 CAACACTCTTCCCCTCTCGTT 59.655 52.381 0.00 0.00 0.00 3.85
412 413 0.969894 ACACTCTTCCCCTCTCGTTG 59.030 55.000 0.00 0.00 0.00 4.10
413 414 0.390472 CACTCTTCCCCTCTCGTTGC 60.390 60.000 0.00 0.00 0.00 4.17
414 415 0.543174 ACTCTTCCCCTCTCGTTGCT 60.543 55.000 0.00 0.00 0.00 3.91
415 416 1.272536 ACTCTTCCCCTCTCGTTGCTA 60.273 52.381 0.00 0.00 0.00 3.49
416 417 2.035632 CTCTTCCCCTCTCGTTGCTAT 58.964 52.381 0.00 0.00 0.00 2.97
417 418 1.757118 TCTTCCCCTCTCGTTGCTATG 59.243 52.381 0.00 0.00 0.00 2.23
418 419 0.178068 TTCCCCTCTCGTTGCTATGC 59.822 55.000 0.00 0.00 0.00 3.14
419 420 0.975556 TCCCCTCTCGTTGCTATGCA 60.976 55.000 0.00 0.00 36.47 3.96
420 421 0.107456 CCCCTCTCGTTGCTATGCAT 59.893 55.000 3.79 3.79 38.76 3.96
421 422 1.506493 CCCTCTCGTTGCTATGCATC 58.494 55.000 0.19 0.00 38.76 3.91
422 423 1.202568 CCCTCTCGTTGCTATGCATCA 60.203 52.381 0.19 0.00 38.76 3.07
423 424 1.863454 CCTCTCGTTGCTATGCATCAC 59.137 52.381 0.19 0.00 38.76 3.06
424 425 1.863454 CTCTCGTTGCTATGCATCACC 59.137 52.381 0.19 0.00 38.76 4.02
425 426 1.206849 TCTCGTTGCTATGCATCACCA 59.793 47.619 0.19 0.00 38.76 4.17
426 427 2.158914 TCTCGTTGCTATGCATCACCAT 60.159 45.455 0.19 0.00 38.76 3.55
427 428 1.941975 TCGTTGCTATGCATCACCATG 59.058 47.619 0.19 0.00 38.76 3.66
428 429 1.941975 CGTTGCTATGCATCACCATGA 59.058 47.619 0.19 0.00 38.76 3.07
429 430 2.551032 CGTTGCTATGCATCACCATGAT 59.449 45.455 0.19 0.00 38.76 2.45
430 431 3.364664 CGTTGCTATGCATCACCATGATC 60.365 47.826 0.19 0.00 38.76 2.92
431 432 3.782656 TGCTATGCATCACCATGATCT 57.217 42.857 0.19 0.00 34.28 2.75
432 433 4.094830 TGCTATGCATCACCATGATCTT 57.905 40.909 0.19 0.00 34.28 2.40
433 434 3.818773 TGCTATGCATCACCATGATCTTG 59.181 43.478 0.19 1.60 34.28 3.02
434 435 3.366070 GCTATGCATCACCATGATCTTGC 60.366 47.826 0.19 0.00 34.28 4.01
435 436 1.018910 TGCATCACCATGATCTTGCG 58.981 50.000 3.07 0.30 34.28 4.85
436 437 1.019673 GCATCACCATGATCTTGCGT 58.980 50.000 3.07 0.87 34.28 5.24
437 438 1.268386 GCATCACCATGATCTTGCGTG 60.268 52.381 17.02 17.02 34.28 5.34
438 439 2.011947 CATCACCATGATCTTGCGTGT 58.988 47.619 19.89 6.63 34.28 4.49
439 440 1.441738 TCACCATGATCTTGCGTGTG 58.558 50.000 19.89 14.96 0.00 3.82
440 441 0.179181 CACCATGATCTTGCGTGTGC 60.179 55.000 15.81 0.00 43.20 4.57
524 525 4.693566 TGAGGAGTAAAACTAATGTTGCCG 59.306 41.667 0.00 0.00 36.39 5.69
543 544 1.600164 CGTGTGTCATGGCAACTTTGG 60.600 52.381 0.00 0.00 37.61 3.28
631 760 6.542370 CCCATGATACGGACACTAAATTTTCT 59.458 38.462 0.00 0.00 0.00 2.52
707 1095 6.043822 TGCCATGGTCCATATAGCTAAAACTA 59.956 38.462 14.67 0.00 0.00 2.24
716 1104 7.016170 TCCATATAGCTAAAACTAGTCATGCCA 59.984 37.037 0.00 0.00 0.00 4.92
844 1364 1.381851 CCCTCTTCAGCTTTGCCCT 59.618 57.895 0.00 0.00 0.00 5.19
846 1366 1.593296 CCTCTTCAGCTTTGCCCTGC 61.593 60.000 0.00 0.00 0.00 4.85
878 1399 5.942236 TCTTTCCTCATCTCTTTCACATTGG 59.058 40.000 0.00 0.00 0.00 3.16
894 1415 0.466555 TTGGTTTGTCCTTCGTGGGG 60.467 55.000 0.00 0.00 37.07 4.96
896 1417 2.114411 TTTGTCCTTCGTGGGGGC 59.886 61.111 0.00 0.00 36.20 5.80
897 1418 3.835790 TTTGTCCTTCGTGGGGGCG 62.836 63.158 0.00 0.00 36.20 6.13
921 1444 3.699894 CGCACTGCTCTCACCCCT 61.700 66.667 0.00 0.00 0.00 4.79
926 1449 3.931631 CTGCTCTCACCCCTCCCCA 62.932 68.421 0.00 0.00 0.00 4.96
927 1450 2.367512 GCTCTCACCCCTCCCCAT 60.368 66.667 0.00 0.00 0.00 4.00
934 1457 0.413434 CACCCCTCCCCATTTTTCCT 59.587 55.000 0.00 0.00 0.00 3.36
980 1504 1.471287 TCTATCCTCACGACAACACGG 59.529 52.381 0.00 0.00 37.61 4.94
1012 1536 1.291877 AACGACGATGGAAGCTGCAC 61.292 55.000 0.00 0.00 0.00 4.57
1030 1753 3.359523 CCGTCGGTGTGGTCGAGA 61.360 66.667 2.08 0.00 37.31 4.04
1069 1792 0.179045 GACGGCCAGCTATGAACCAT 60.179 55.000 2.24 0.00 0.00 3.55
1072 1795 0.106708 GGCCAGCTATGAACCATCGA 59.893 55.000 0.00 0.00 0.00 3.59
1073 1796 1.271054 GGCCAGCTATGAACCATCGAT 60.271 52.381 0.00 0.00 0.00 3.59
1085 1808 1.276138 ACCATCGATCACAGAGTTGCA 59.724 47.619 0.00 0.00 0.00 4.08
1118 1861 3.335356 AAGATGCACCTGCGGAGGG 62.335 63.158 27.88 16.67 44.84 4.30
1120 1863 3.746949 GATGCACCTGCGGAGGGAG 62.747 68.421 27.88 19.52 44.84 4.30
1227 1970 1.338200 GCATGGAGACGAGTTGGAACT 60.338 52.381 0.00 0.00 43.16 3.01
1252 1995 1.007964 CAATTTGGTTGCGACGCCA 60.008 52.632 18.69 2.61 0.00 5.69
1291 2034 3.070446 ACATGTCAACTAGTTGGAACCGA 59.930 43.478 30.35 11.44 40.78 4.69
1331 2613 4.322385 GGGGCAACACGTTCGTGC 62.322 66.667 22.35 10.74 39.53 5.34
1347 2634 2.741211 GCGAGAACCACCCCGTTC 60.741 66.667 0.00 0.00 42.08 3.95
1356 2643 1.375013 CACCCCGTTCTACCCGTTG 60.375 63.158 0.00 0.00 0.00 4.10
1360 2647 0.461339 CCCGTTCTACCCGTTGGATG 60.461 60.000 0.00 0.00 34.81 3.51
1361 2648 0.461339 CCGTTCTACCCGTTGGATGG 60.461 60.000 0.00 0.00 34.81 3.51
1363 2650 1.738030 CGTTCTACCCGTTGGATGGTC 60.738 57.143 0.00 0.00 36.04 4.02
1368 2685 2.511600 CCGTTGGATGGTCGAGCC 60.512 66.667 12.85 4.60 37.90 4.70
1369 2686 2.579201 CGTTGGATGGTCGAGCCT 59.421 61.111 12.85 1.18 38.35 4.58
1478 2795 0.596600 GTTCCACGTGAGCGAGTGAA 60.597 55.000 19.30 7.10 40.56 3.18
1491 2808 2.028484 GTGAACGTCACGGAGCCA 59.972 61.111 0.35 0.00 37.67 4.75
1497 2814 3.695606 GTCACGGAGCCAGCAGGA 61.696 66.667 0.00 0.00 36.89 3.86
1501 2818 3.710722 CGGAGCCAGCAGGAAGGT 61.711 66.667 0.00 0.00 36.89 3.50
1504 2821 1.153269 GAGCCAGCAGGAAGGTAGC 60.153 63.158 0.00 0.00 36.89 3.58
1506 2823 1.204113 AGCCAGCAGGAAGGTAGCTT 61.204 55.000 6.94 6.94 39.70 3.74
1508 2825 0.615331 CCAGCAGGAAGGTAGCTTCA 59.385 55.000 30.11 0.00 36.26 3.02
1510 2827 2.354259 CAGCAGGAAGGTAGCTTCAAG 58.646 52.381 30.11 22.98 36.26 3.02
1511 2828 1.280421 AGCAGGAAGGTAGCTTCAAGG 59.720 52.381 30.11 20.70 34.37 3.61
1512 2829 1.279271 GCAGGAAGGTAGCTTCAAGGA 59.721 52.381 30.11 0.00 35.19 3.36
1513 2830 2.290323 GCAGGAAGGTAGCTTCAAGGAA 60.290 50.000 30.11 0.00 35.19 3.36
1514 2831 3.810743 GCAGGAAGGTAGCTTCAAGGAAA 60.811 47.826 30.11 0.00 35.19 3.13
1515 2832 4.006319 CAGGAAGGTAGCTTCAAGGAAAG 58.994 47.826 30.11 11.63 35.19 2.62
1516 2833 3.009584 AGGAAGGTAGCTTCAAGGAAAGG 59.990 47.826 30.11 0.00 35.19 3.11
1538 2871 0.951040 CCAGGTCAAGTCAGCGTTCC 60.951 60.000 0.00 0.00 0.00 3.62
1539 2872 0.951040 CAGGTCAAGTCAGCGTTCCC 60.951 60.000 0.00 0.00 0.00 3.97
1661 2994 1.589113 CATCGAGCCTAGCCTAGCC 59.411 63.158 0.00 0.00 0.00 3.93
1662 2995 1.974343 ATCGAGCCTAGCCTAGCCG 60.974 63.158 0.00 0.00 0.00 5.52
1688 3021 3.947841 CGAGCCGAGCGGAGAGAG 61.948 72.222 13.94 0.00 37.50 3.20
1689 3022 2.515057 GAGCCGAGCGGAGAGAGA 60.515 66.667 13.94 0.00 37.50 3.10
1690 3023 2.515991 AGCCGAGCGGAGAGAGAG 60.516 66.667 13.94 0.00 37.50 3.20
1691 3024 2.515057 GCCGAGCGGAGAGAGAGA 60.515 66.667 13.94 0.00 37.50 3.10
1692 3025 2.542907 GCCGAGCGGAGAGAGAGAG 61.543 68.421 13.94 0.00 37.50 3.20
1693 3026 1.145156 CCGAGCGGAGAGAGAGAGA 59.855 63.158 2.00 0.00 37.50 3.10
1694 3027 0.880278 CCGAGCGGAGAGAGAGAGAG 60.880 65.000 2.00 0.00 37.50 3.20
1695 3028 0.104120 CGAGCGGAGAGAGAGAGAGA 59.896 60.000 0.00 0.00 0.00 3.10
1696 3029 1.869754 CGAGCGGAGAGAGAGAGAGAG 60.870 61.905 0.00 0.00 0.00 3.20
1697 3030 1.412710 GAGCGGAGAGAGAGAGAGAGA 59.587 57.143 0.00 0.00 0.00 3.10
1698 3031 1.414181 AGCGGAGAGAGAGAGAGAGAG 59.586 57.143 0.00 0.00 0.00 3.20
1699 3032 1.412710 GCGGAGAGAGAGAGAGAGAGA 59.587 57.143 0.00 0.00 0.00 3.10
1714 3047 4.148825 AGACGAGCCCATGCCGAC 62.149 66.667 0.00 0.00 38.69 4.79
1761 3094 4.018490 CCACCCATTCATTCATTCACTCA 58.982 43.478 0.00 0.00 0.00 3.41
1762 3095 4.647853 CCACCCATTCATTCATTCACTCAT 59.352 41.667 0.00 0.00 0.00 2.90
1763 3096 5.128171 CCACCCATTCATTCATTCACTCATT 59.872 40.000 0.00 0.00 0.00 2.57
1764 3097 6.270815 CACCCATTCATTCATTCACTCATTC 58.729 40.000 0.00 0.00 0.00 2.67
1766 3099 6.096423 ACCCATTCATTCATTCACTCATTCTG 59.904 38.462 0.00 0.00 0.00 3.02
1778 3162 9.661187 CATTCACTCATTCTGCTTTAATCATAC 57.339 33.333 0.00 0.00 0.00 2.39
1792 3176 0.179121 TCATACGGCTCATCGCGTTT 60.179 50.000 5.77 0.00 40.44 3.60
1793 3177 0.229753 CATACGGCTCATCGCGTTTC 59.770 55.000 5.77 0.00 40.44 2.78
1804 3188 1.671054 CGCGTTTCACACCATCCCT 60.671 57.895 0.00 0.00 0.00 4.20
1806 3190 1.305930 GCGTTTCACACCATCCCTCC 61.306 60.000 0.00 0.00 0.00 4.30
1809 3193 0.774096 TTTCACACCATCCCTCCCCA 60.774 55.000 0.00 0.00 0.00 4.96
1810 3194 1.207488 TTCACACCATCCCTCCCCAG 61.207 60.000 0.00 0.00 0.00 4.45
1812 3196 3.813724 CACCATCCCTCCCCAGCC 61.814 72.222 0.00 0.00 0.00 4.85
1813 3197 4.044390 ACCATCCCTCCCCAGCCT 62.044 66.667 0.00 0.00 0.00 4.58
1814 3198 2.697644 CCATCCCTCCCCAGCCTT 60.698 66.667 0.00 0.00 0.00 4.35
1815 3199 2.761465 CCATCCCTCCCCAGCCTTC 61.761 68.421 0.00 0.00 0.00 3.46
1816 3200 2.770048 ATCCCTCCCCAGCCTTCG 60.770 66.667 0.00 0.00 0.00 3.79
1853 3237 4.740822 GCATTGACGGTGGGCCCT 62.741 66.667 25.70 0.66 0.00 5.19
1883 3271 1.301716 ACGCCACGATGTGAAGCTT 60.302 52.632 0.00 0.00 35.23 3.74
1884 3272 1.133253 CGCCACGATGTGAAGCTTG 59.867 57.895 2.10 0.00 35.23 4.01
1888 3276 0.445436 CACGATGTGAAGCTTGGAGC 59.555 55.000 2.10 0.00 37.31 4.70
1897 3285 4.785453 GCTTGGAGCTGGACCCGG 62.785 72.222 0.00 0.00 38.45 5.73
1900 3288 2.124507 CTTGGAGCTGGACCCGGAAA 62.125 60.000 0.73 0.00 0.00 3.13
1901 3289 1.497309 TTGGAGCTGGACCCGGAAAT 61.497 55.000 0.73 0.00 0.00 2.17
1902 3290 0.619255 TGGAGCTGGACCCGGAAATA 60.619 55.000 0.73 0.00 0.00 1.40
1903 3291 0.765510 GGAGCTGGACCCGGAAATAT 59.234 55.000 0.73 0.00 0.00 1.28
1904 3292 1.543429 GGAGCTGGACCCGGAAATATG 60.543 57.143 0.73 0.00 0.00 1.78
1905 3293 0.179018 AGCTGGACCCGGAAATATGC 60.179 55.000 0.73 0.00 0.00 3.14
1906 3294 0.179018 GCTGGACCCGGAAATATGCT 60.179 55.000 0.73 0.00 0.00 3.79
1907 3295 1.750682 GCTGGACCCGGAAATATGCTT 60.751 52.381 0.73 0.00 0.00 3.91
1923 3327 4.942761 ATGCTTGAGAAAAGAAAAGGCA 57.057 36.364 0.00 0.00 0.00 4.75
1932 3336 5.922053 AGAAAAGAAAAGGCAAGCTGAAAT 58.078 33.333 0.00 0.00 0.00 2.17
1933 3337 6.351711 AGAAAAGAAAAGGCAAGCTGAAATT 58.648 32.000 0.00 0.00 0.00 1.82
1934 3338 6.825213 AGAAAAGAAAAGGCAAGCTGAAATTT 59.175 30.769 0.00 0.00 0.00 1.82
1935 3339 7.986889 AGAAAAGAAAAGGCAAGCTGAAATTTA 59.013 29.630 0.00 0.00 0.00 1.40
1936 3340 7.719778 AAAGAAAAGGCAAGCTGAAATTTAG 57.280 32.000 0.00 0.00 0.00 1.85
1937 3341 5.787380 AGAAAAGGCAAGCTGAAATTTAGG 58.213 37.500 0.00 0.00 0.00 2.69
1938 3342 5.539955 AGAAAAGGCAAGCTGAAATTTAGGA 59.460 36.000 0.00 0.00 0.00 2.94
1939 3343 5.806654 AAAGGCAAGCTGAAATTTAGGAA 57.193 34.783 0.00 0.00 0.00 3.36
1940 3344 5.806654 AAGGCAAGCTGAAATTTAGGAAA 57.193 34.783 0.00 0.00 0.00 3.13
2056 3495 2.358737 CAGGTCCACGGAAGGTGC 60.359 66.667 0.00 0.00 45.62 5.01
2058 3497 3.637273 GGTCCACGGAAGGTGCCT 61.637 66.667 0.00 0.00 45.62 4.75
2060 3499 3.691342 TCCACGGAAGGTGCCTCG 61.691 66.667 0.00 0.00 45.62 4.63
2090 3529 9.109393 AGCATAACATAATCCGCGAATAATATT 57.891 29.630 8.23 0.00 0.00 1.28
2091 3530 9.370126 GCATAACATAATCCGCGAATAATATTC 57.630 33.333 8.23 3.00 0.00 1.75
2127 3566 4.868734 CCAAAGAAAGATACCACTCGTACC 59.131 45.833 0.00 0.00 0.00 3.34
2134 3575 1.614996 TACCACTCGTACCACCGAAA 58.385 50.000 0.00 0.00 36.24 3.46
2140 3581 0.108520 TCGTACCACCGAAAGATGCC 60.109 55.000 0.00 0.00 33.15 4.40
2143 3584 0.174845 TACCACCGAAAGATGCCTCG 59.825 55.000 0.00 0.00 34.83 4.63
2218 3662 6.398095 TCATCAATTATATCAGCCACGGTAG 58.602 40.000 0.00 0.00 0.00 3.18
2219 3663 5.147330 TCAATTATATCAGCCACGGTAGG 57.853 43.478 0.00 0.00 0.00 3.18
2220 3664 4.591498 TCAATTATATCAGCCACGGTAGGT 59.409 41.667 0.00 0.00 0.00 3.08
2236 3680 1.522806 GGTGGTGCGGCGATAATGA 60.523 57.895 12.98 0.00 0.00 2.57
2255 3699 0.660595 AGAATCGATAAGGACGCGCG 60.661 55.000 30.96 30.96 0.00 6.86
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.750125 GACTAATACATGTTCATATGACTGTGA 57.250 33.333 18.38 0.00 0.00 3.58
1 2 9.533253 TGACTAATACATGTTCATATGACTGTG 57.467 33.333 18.38 13.57 0.00 3.66
12 13 8.668353 TGCTTTCTTCATGACTAATACATGTTC 58.332 33.333 2.30 0.00 43.56 3.18
13 14 8.565896 TGCTTTCTTCATGACTAATACATGTT 57.434 30.769 2.30 0.00 43.56 2.71
17 18 8.830580 GCTATTGCTTTCTTCATGACTAATACA 58.169 33.333 0.00 0.00 36.03 2.29
18 19 8.830580 TGCTATTGCTTTCTTCATGACTAATAC 58.169 33.333 0.00 0.00 40.48 1.89
19 20 8.962884 TGCTATTGCTTTCTTCATGACTAATA 57.037 30.769 0.00 0.00 40.48 0.98
20 21 7.870509 TGCTATTGCTTTCTTCATGACTAAT 57.129 32.000 0.00 0.00 40.48 1.73
21 22 7.174772 TGTTGCTATTGCTTTCTTCATGACTAA 59.825 33.333 0.00 0.00 40.48 2.24
24 25 5.702865 TGTTGCTATTGCTTTCTTCATGAC 58.297 37.500 0.00 0.00 40.48 3.06
26 27 7.478322 AGTATGTTGCTATTGCTTTCTTCATG 58.522 34.615 0.00 0.00 40.48 3.07
27 28 7.636150 AGTATGTTGCTATTGCTTTCTTCAT 57.364 32.000 0.00 0.17 40.48 2.57
29 30 9.278734 GTTTAGTATGTTGCTATTGCTTTCTTC 57.721 33.333 0.00 0.00 40.48 2.87
31 32 7.333423 TCGTTTAGTATGTTGCTATTGCTTTCT 59.667 33.333 0.00 0.00 40.48 2.52
34 35 6.978343 TCGTTTAGTATGTTGCTATTGCTT 57.022 33.333 0.00 0.00 40.48 3.91
35 36 6.074302 CGATCGTTTAGTATGTTGCTATTGCT 60.074 38.462 7.03 0.00 40.48 3.91
36 37 6.065153 CGATCGTTTAGTATGTTGCTATTGC 58.935 40.000 7.03 0.00 40.20 3.56
37 38 7.167635 ACTCGATCGTTTAGTATGTTGCTATTG 59.832 37.037 15.94 0.00 0.00 1.90
38 39 7.167635 CACTCGATCGTTTAGTATGTTGCTATT 59.832 37.037 15.94 0.00 0.00 1.73
40 41 5.969435 CACTCGATCGTTTAGTATGTTGCTA 59.031 40.000 15.94 0.00 0.00 3.49
42 43 4.548346 GCACTCGATCGTTTAGTATGTTGC 60.548 45.833 15.94 6.99 0.00 4.17
43 44 4.798907 AGCACTCGATCGTTTAGTATGTTG 59.201 41.667 15.94 0.73 0.00 3.33
45 46 4.634184 AGCACTCGATCGTTTAGTATGT 57.366 40.909 15.94 0.00 0.00 2.29
46 47 5.115773 GCTTAGCACTCGATCGTTTAGTATG 59.884 44.000 15.94 2.12 0.00 2.39
47 48 5.008811 AGCTTAGCACTCGATCGTTTAGTAT 59.991 40.000 15.94 6.33 0.00 2.12
48 49 4.334759 AGCTTAGCACTCGATCGTTTAGTA 59.665 41.667 15.94 0.27 0.00 1.82
49 50 3.128938 AGCTTAGCACTCGATCGTTTAGT 59.871 43.478 15.94 8.62 0.00 2.24
51 52 3.777465 AGCTTAGCACTCGATCGTTTA 57.223 42.857 15.94 0.00 0.00 2.01
52 53 2.656560 AGCTTAGCACTCGATCGTTT 57.343 45.000 15.94 0.00 0.00 3.60
53 54 3.436496 GTTAGCTTAGCACTCGATCGTT 58.564 45.455 15.94 0.04 0.00 3.85
54 55 2.539142 CGTTAGCTTAGCACTCGATCGT 60.539 50.000 15.94 0.00 0.00 3.73
56 57 2.033049 TCCGTTAGCTTAGCACTCGATC 59.967 50.000 7.07 0.00 0.00 3.69
57 58 2.022195 TCCGTTAGCTTAGCACTCGAT 58.978 47.619 7.07 0.00 0.00 3.59
58 59 1.456296 TCCGTTAGCTTAGCACTCGA 58.544 50.000 7.07 0.00 0.00 4.04
59 60 2.273370 TTCCGTTAGCTTAGCACTCG 57.727 50.000 7.07 7.42 0.00 4.18
60 61 2.866762 CCATTCCGTTAGCTTAGCACTC 59.133 50.000 7.07 0.00 0.00 3.51
61 62 2.420129 CCCATTCCGTTAGCTTAGCACT 60.420 50.000 7.07 0.00 0.00 4.40
62 63 1.940613 CCCATTCCGTTAGCTTAGCAC 59.059 52.381 7.07 0.00 0.00 4.40
63 64 1.557832 ACCCATTCCGTTAGCTTAGCA 59.442 47.619 7.07 0.00 0.00 3.49
64 65 2.210961 GACCCATTCCGTTAGCTTAGC 58.789 52.381 0.00 0.00 0.00 3.09
65 66 3.536956 TGACCCATTCCGTTAGCTTAG 57.463 47.619 0.00 0.00 0.00 2.18
66 67 3.262405 ACTTGACCCATTCCGTTAGCTTA 59.738 43.478 0.00 0.00 0.00 3.09
67 68 2.039879 ACTTGACCCATTCCGTTAGCTT 59.960 45.455 0.00 0.00 0.00 3.74
69 70 2.007608 GACTTGACCCATTCCGTTAGC 58.992 52.381 0.00 0.00 0.00 3.09
70 71 3.328382 TGACTTGACCCATTCCGTTAG 57.672 47.619 0.00 0.00 0.00 2.34
72 73 2.649531 TTGACTTGACCCATTCCGTT 57.350 45.000 0.00 0.00 0.00 4.44
73 74 2.039746 TGATTGACTTGACCCATTCCGT 59.960 45.455 0.00 0.00 0.00 4.69
74 75 2.420022 GTGATTGACTTGACCCATTCCG 59.580 50.000 0.00 0.00 0.00 4.30
75 76 3.420893 TGTGATTGACTTGACCCATTCC 58.579 45.455 0.00 0.00 0.00 3.01
76 77 4.701651 TGATGTGATTGACTTGACCCATTC 59.298 41.667 0.00 0.00 0.00 2.67
78 79 4.305539 TGATGTGATTGACTTGACCCAT 57.694 40.909 0.00 0.00 0.00 4.00
79 80 3.786368 TGATGTGATTGACTTGACCCA 57.214 42.857 0.00 0.00 0.00 4.51
80 81 4.946157 AGAATGATGTGATTGACTTGACCC 59.054 41.667 0.00 0.00 0.00 4.46
81 82 5.065731 GGAGAATGATGTGATTGACTTGACC 59.934 44.000 0.00 0.00 0.00 4.02
83 84 6.058553 AGGAGAATGATGTGATTGACTTGA 57.941 37.500 0.00 0.00 0.00 3.02
84 85 7.854557 TTAGGAGAATGATGTGATTGACTTG 57.145 36.000 0.00 0.00 0.00 3.16
87 88 8.618702 ATCATTAGGAGAATGATGTGATTGAC 57.381 34.615 11.08 0.00 43.52 3.18
97 98 5.279657 CGGGATCACATCATTAGGAGAATGA 60.280 44.000 0.00 2.66 40.50 2.57
98 99 4.934001 CGGGATCACATCATTAGGAGAATG 59.066 45.833 0.00 0.00 0.00 2.67
99 100 4.594920 ACGGGATCACATCATTAGGAGAAT 59.405 41.667 0.00 0.00 0.00 2.40
101 102 3.576861 ACGGGATCACATCATTAGGAGA 58.423 45.455 0.00 0.00 0.00 3.71
103 104 5.880164 TTAACGGGATCACATCATTAGGA 57.120 39.130 0.00 0.00 0.00 2.94
104 105 6.230472 TGATTAACGGGATCACATCATTAGG 58.770 40.000 0.00 0.00 0.00 2.69
105 106 7.728847 TTGATTAACGGGATCACATCATTAG 57.271 36.000 0.00 0.00 33.51 1.73
106 107 8.690203 ATTTGATTAACGGGATCACATCATTA 57.310 30.769 0.00 0.00 33.51 1.90
107 108 7.587037 ATTTGATTAACGGGATCACATCATT 57.413 32.000 0.00 0.00 33.51 2.57
108 109 8.567948 GTTATTTGATTAACGGGATCACATCAT 58.432 33.333 0.00 0.00 33.51 2.45
109 110 7.554476 TGTTATTTGATTAACGGGATCACATCA 59.446 33.333 0.00 0.00 35.30 3.07
110 111 7.925993 TGTTATTTGATTAACGGGATCACATC 58.074 34.615 0.00 0.00 35.30 3.06
113 114 7.758495 AGTTGTTATTTGATTAACGGGATCAC 58.242 34.615 0.00 0.00 35.30 3.06
115 116 8.209917 AGAGTTGTTATTTGATTAACGGGATC 57.790 34.615 0.00 0.00 35.30 3.36
116 117 8.575649 AAGAGTTGTTATTTGATTAACGGGAT 57.424 30.769 0.00 0.00 35.30 3.85
118 119 8.079809 ACAAAGAGTTGTTATTTGATTAACGGG 58.920 33.333 4.08 0.00 46.01 5.28
135 136 7.514721 TGTTTCCTAACCATAGACAAAGAGTT 58.485 34.615 0.00 0.00 33.15 3.01
137 138 9.667107 TTATGTTTCCTAACCATAGACAAAGAG 57.333 33.333 0.00 0.00 33.15 2.85
138 139 9.444600 GTTATGTTTCCTAACCATAGACAAAGA 57.555 33.333 0.00 0.00 33.15 2.52
139 140 8.674607 GGTTATGTTTCCTAACCATAGACAAAG 58.325 37.037 7.24 0.00 44.95 2.77
140 141 8.570068 GGTTATGTTTCCTAACCATAGACAAA 57.430 34.615 7.24 0.00 44.95 2.83
153 154 8.458843 CGTTAATCAAAGATGGTTATGTTTCCT 58.541 33.333 0.00 0.00 32.32 3.36
155 156 9.490663 CTCGTTAATCAAAGATGGTTATGTTTC 57.509 33.333 0.00 0.00 32.32 2.78
156 157 7.968405 GCTCGTTAATCAAAGATGGTTATGTTT 59.032 33.333 0.00 0.00 32.32 2.83
157 158 7.336931 AGCTCGTTAATCAAAGATGGTTATGTT 59.663 33.333 0.00 0.00 32.32 2.71
158 159 6.823689 AGCTCGTTAATCAAAGATGGTTATGT 59.176 34.615 0.00 0.00 32.32 2.29
159 160 7.251704 AGCTCGTTAATCAAAGATGGTTATG 57.748 36.000 0.00 0.00 32.32 1.90
160 161 8.204836 ACTAGCTCGTTAATCAAAGATGGTTAT 58.795 33.333 0.00 0.00 32.32 1.89
161 162 7.553334 ACTAGCTCGTTAATCAAAGATGGTTA 58.447 34.615 0.00 0.00 30.84 2.85
164 165 6.042777 TGACTAGCTCGTTAATCAAAGATGG 58.957 40.000 0.00 0.00 0.00 3.51
165 166 7.276658 ACTTGACTAGCTCGTTAATCAAAGATG 59.723 37.037 0.00 0.00 0.00 2.90
166 167 7.324178 ACTTGACTAGCTCGTTAATCAAAGAT 58.676 34.615 0.00 0.00 0.00 2.40
167 168 6.688578 ACTTGACTAGCTCGTTAATCAAAGA 58.311 36.000 0.00 0.00 0.00 2.52
168 169 6.952935 ACTTGACTAGCTCGTTAATCAAAG 57.047 37.500 0.00 0.00 0.00 2.77
169 170 7.823665 TCTACTTGACTAGCTCGTTAATCAAA 58.176 34.615 0.00 0.00 0.00 2.69
173 174 5.221087 GCCTCTACTTGACTAGCTCGTTAAT 60.221 44.000 0.00 0.00 0.00 1.40
174 175 4.096081 GCCTCTACTTGACTAGCTCGTTAA 59.904 45.833 0.00 0.00 0.00 2.01
175 176 3.626670 GCCTCTACTTGACTAGCTCGTTA 59.373 47.826 0.00 0.00 0.00 3.18
176 177 2.424246 GCCTCTACTTGACTAGCTCGTT 59.576 50.000 0.00 0.00 0.00 3.85
177 178 2.018515 GCCTCTACTTGACTAGCTCGT 58.981 52.381 0.00 0.00 0.00 4.18
178 179 2.017782 TGCCTCTACTTGACTAGCTCG 58.982 52.381 0.00 0.00 0.00 5.03
179 180 4.825085 AGTATGCCTCTACTTGACTAGCTC 59.175 45.833 0.00 0.00 0.00 4.09
180 181 4.798882 AGTATGCCTCTACTTGACTAGCT 58.201 43.478 0.00 0.00 0.00 3.32
181 182 5.766174 AGTAGTATGCCTCTACTTGACTAGC 59.234 44.000 6.71 0.00 43.48 3.42
182 183 6.993308 TCAGTAGTATGCCTCTACTTGACTAG 59.007 42.308 8.99 0.00 43.48 2.57
183 184 6.766944 GTCAGTAGTATGCCTCTACTTGACTA 59.233 42.308 19.54 0.00 43.48 2.59
185 186 5.357314 TGTCAGTAGTATGCCTCTACTTGAC 59.643 44.000 19.73 19.73 43.48 3.18
186 187 5.357314 GTGTCAGTAGTATGCCTCTACTTGA 59.643 44.000 8.99 8.08 43.48 3.02
187 188 5.358442 AGTGTCAGTAGTATGCCTCTACTTG 59.642 44.000 8.99 6.54 43.48 3.16
190 191 5.008217 CAGAGTGTCAGTAGTATGCCTCTAC 59.992 48.000 0.00 0.00 38.30 2.59
192 193 3.951037 CAGAGTGTCAGTAGTATGCCTCT 59.049 47.826 0.00 0.00 0.00 3.69
193 194 3.697045 ACAGAGTGTCAGTAGTATGCCTC 59.303 47.826 0.00 0.00 0.00 4.70
195 196 4.457834 AACAGAGTGTCAGTAGTATGCC 57.542 45.455 0.00 0.00 0.00 4.40
196 197 5.230942 ACAAACAGAGTGTCAGTAGTATGC 58.769 41.667 0.00 0.00 0.00 3.14
197 198 6.682746 AGACAAACAGAGTGTCAGTAGTATG 58.317 40.000 7.26 0.00 46.44 2.39
198 199 6.902771 AGACAAACAGAGTGTCAGTAGTAT 57.097 37.500 7.26 0.00 46.44 2.12
200 201 6.265649 ACATAGACAAACAGAGTGTCAGTAGT 59.734 38.462 7.26 0.00 46.44 2.73
201 202 6.682746 ACATAGACAAACAGAGTGTCAGTAG 58.317 40.000 7.26 0.00 46.44 2.57
203 204 5.537300 ACATAGACAAACAGAGTGTCAGT 57.463 39.130 7.26 0.66 46.44 3.41
204 205 7.814587 TGAATACATAGACAAACAGAGTGTCAG 59.185 37.037 7.26 0.12 46.44 3.51
205 206 7.598869 GTGAATACATAGACAAACAGAGTGTCA 59.401 37.037 7.26 0.00 46.44 3.58
206 207 7.598869 TGTGAATACATAGACAAACAGAGTGTC 59.401 37.037 0.00 0.00 44.75 3.67
207 208 7.385205 GTGTGAATACATAGACAAACAGAGTGT 59.615 37.037 0.00 0.00 39.39 3.55
208 209 7.384932 TGTGTGAATACATAGACAAACAGAGTG 59.615 37.037 0.00 0.00 39.39 3.51
209 210 7.441836 TGTGTGAATACATAGACAAACAGAGT 58.558 34.615 0.00 0.00 39.39 3.24
210 211 7.889589 TGTGTGAATACATAGACAAACAGAG 57.110 36.000 0.00 0.00 39.39 3.35
211 212 7.877612 ACATGTGTGAATACATAGACAAACAGA 59.122 33.333 0.00 0.00 39.17 3.41
212 213 8.032952 ACATGTGTGAATACATAGACAAACAG 57.967 34.615 0.00 0.00 39.17 3.16
213 214 7.977789 ACATGTGTGAATACATAGACAAACA 57.022 32.000 0.00 0.00 39.17 2.83
223 224 9.454859 TGGAAACATAATACATGTGTGAATACA 57.545 29.630 9.11 1.84 33.40 2.29
224 225 9.935682 CTGGAAACATAATACATGTGTGAATAC 57.064 33.333 9.11 0.00 41.51 1.89
226 227 8.579850 ACTGGAAACATAATACATGTGTGAAT 57.420 30.769 9.11 0.00 41.51 2.57
227 228 7.994425 ACTGGAAACATAATACATGTGTGAA 57.006 32.000 9.11 0.00 41.51 3.18
228 229 7.994425 AACTGGAAACATAATACATGTGTGA 57.006 32.000 9.11 0.00 41.51 3.58
242 243 8.856153 TGCTAGAATTGTATTAACTGGAAACA 57.144 30.769 0.00 0.00 39.59 2.83
243 244 9.722056 CATGCTAGAATTGTATTAACTGGAAAC 57.278 33.333 0.00 0.00 0.00 2.78
244 245 9.679661 TCATGCTAGAATTGTATTAACTGGAAA 57.320 29.630 0.00 0.00 0.00 3.13
245 246 9.679661 TTCATGCTAGAATTGTATTAACTGGAA 57.320 29.630 0.00 0.00 0.00 3.53
246 247 9.851686 ATTCATGCTAGAATTGTATTAACTGGA 57.148 29.630 0.00 0.00 34.70 3.86
322 323 4.505742 GGTGAAGGAAATATGCCCTAGAGG 60.506 50.000 0.00 0.00 39.47 3.69
323 324 4.349342 AGGTGAAGGAAATATGCCCTAGAG 59.651 45.833 0.00 0.00 31.36 2.43
324 325 4.307259 AGGTGAAGGAAATATGCCCTAGA 58.693 43.478 0.00 0.00 31.36 2.43
325 326 4.713792 AGGTGAAGGAAATATGCCCTAG 57.286 45.455 0.00 0.00 31.36 3.02
326 327 4.229582 ACAAGGTGAAGGAAATATGCCCTA 59.770 41.667 0.00 0.00 31.36 3.53
327 328 3.011708 ACAAGGTGAAGGAAATATGCCCT 59.988 43.478 0.00 0.00 0.00 5.19
328 329 3.365472 ACAAGGTGAAGGAAATATGCCC 58.635 45.455 0.00 0.00 0.00 5.36
329 330 4.220602 ACAACAAGGTGAAGGAAATATGCC 59.779 41.667 0.00 0.00 0.00 4.40
330 331 5.048083 TGACAACAAGGTGAAGGAAATATGC 60.048 40.000 0.00 0.00 0.00 3.14
331 332 6.573664 TGACAACAAGGTGAAGGAAATATG 57.426 37.500 0.00 0.00 0.00 1.78
332 333 8.877864 TTATGACAACAAGGTGAAGGAAATAT 57.122 30.769 0.00 0.00 0.00 1.28
333 334 8.877864 ATTATGACAACAAGGTGAAGGAAATA 57.122 30.769 0.00 0.00 0.00 1.40
334 335 7.781324 ATTATGACAACAAGGTGAAGGAAAT 57.219 32.000 0.00 0.00 0.00 2.17
335 336 7.942341 AGTATTATGACAACAAGGTGAAGGAAA 59.058 33.333 0.00 0.00 0.00 3.13
336 337 7.458397 AGTATTATGACAACAAGGTGAAGGAA 58.542 34.615 0.00 0.00 0.00 3.36
337 338 7.016153 AGTATTATGACAACAAGGTGAAGGA 57.984 36.000 0.00 0.00 0.00 3.36
338 339 7.687941 AAGTATTATGACAACAAGGTGAAGG 57.312 36.000 0.00 0.00 0.00 3.46
339 340 7.957484 CGAAAGTATTATGACAACAAGGTGAAG 59.043 37.037 0.00 0.00 0.00 3.02
340 341 7.572353 GCGAAAGTATTATGACAACAAGGTGAA 60.572 37.037 0.00 0.00 0.00 3.18
341 342 6.128391 GCGAAAGTATTATGACAACAAGGTGA 60.128 38.462 0.00 0.00 0.00 4.02
342 343 6.021596 GCGAAAGTATTATGACAACAAGGTG 58.978 40.000 0.00 0.00 0.00 4.00
343 344 5.938125 AGCGAAAGTATTATGACAACAAGGT 59.062 36.000 0.00 0.00 0.00 3.50
344 345 6.422776 AGCGAAAGTATTATGACAACAAGG 57.577 37.500 0.00 0.00 0.00 3.61
345 346 7.630987 CGTAAGCGAAAGTATTATGACAACAAG 59.369 37.037 0.00 0.00 41.33 3.16
346 347 7.412129 CCGTAAGCGAAAGTATTATGACAACAA 60.412 37.037 0.00 0.00 41.33 2.83
347 348 6.035220 CCGTAAGCGAAAGTATTATGACAACA 59.965 38.462 0.00 0.00 41.33 3.33
348 349 6.035327 ACCGTAAGCGAAAGTATTATGACAAC 59.965 38.462 0.00 0.00 41.33 3.32
349 350 6.101332 ACCGTAAGCGAAAGTATTATGACAA 58.899 36.000 0.00 0.00 41.33 3.18
350 351 5.653507 ACCGTAAGCGAAAGTATTATGACA 58.346 37.500 0.00 0.00 41.33 3.58
351 352 5.975939 AGACCGTAAGCGAAAGTATTATGAC 59.024 40.000 0.00 0.00 41.33 3.06
352 353 6.140303 AGACCGTAAGCGAAAGTATTATGA 57.860 37.500 0.00 0.00 41.33 2.15
353 354 6.085979 CGTAGACCGTAAGCGAAAGTATTATG 59.914 42.308 0.00 0.00 41.33 1.90
354 355 6.017934 TCGTAGACCGTAAGCGAAAGTATTAT 60.018 38.462 0.00 0.00 41.33 1.28
355 356 5.293324 TCGTAGACCGTAAGCGAAAGTATTA 59.707 40.000 0.00 0.00 41.33 0.98
356 357 4.094887 TCGTAGACCGTAAGCGAAAGTATT 59.905 41.667 0.00 0.00 41.33 1.89
357 358 3.623060 TCGTAGACCGTAAGCGAAAGTAT 59.377 43.478 0.00 0.00 41.33 2.12
358 359 3.000041 TCGTAGACCGTAAGCGAAAGTA 59.000 45.455 0.00 0.00 41.33 2.24
359 360 1.806542 TCGTAGACCGTAAGCGAAAGT 59.193 47.619 0.00 0.00 41.33 2.66
360 361 2.438583 CTCGTAGACCGTAAGCGAAAG 58.561 52.381 0.00 0.00 41.33 2.62
361 362 1.131126 CCTCGTAGACCGTAAGCGAAA 59.869 52.381 0.00 0.00 41.33 3.46
362 363 0.729116 CCTCGTAGACCGTAAGCGAA 59.271 55.000 0.00 0.00 41.33 4.70
363 364 1.091771 CCCTCGTAGACCGTAAGCGA 61.092 60.000 0.00 0.00 41.33 4.93
364 365 1.354506 CCCTCGTAGACCGTAAGCG 59.645 63.158 0.00 0.00 37.94 4.68
365 366 1.332065 GTACCCTCGTAGACCGTAAGC 59.668 57.143 0.00 0.00 37.94 3.09
366 367 1.594862 CGTACCCTCGTAGACCGTAAG 59.405 57.143 0.00 0.00 37.94 2.34
367 368 1.066430 ACGTACCCTCGTAGACCGTAA 60.066 52.381 0.00 0.00 42.35 3.18
368 369 0.535335 ACGTACCCTCGTAGACCGTA 59.465 55.000 0.00 0.00 42.35 4.02
369 370 1.021390 CACGTACCCTCGTAGACCGT 61.021 60.000 0.00 0.00 42.27 4.83
370 371 1.709147 CCACGTACCCTCGTAGACCG 61.709 65.000 0.00 0.00 42.27 4.79
371 372 0.392998 TCCACGTACCCTCGTAGACC 60.393 60.000 0.00 0.00 42.27 3.85
372 373 0.729690 GTCCACGTACCCTCGTAGAC 59.270 60.000 0.00 2.79 42.50 2.59
373 374 0.324614 TGTCCACGTACCCTCGTAGA 59.675 55.000 0.00 0.00 42.27 2.59
374 375 1.135575 GTTGTCCACGTACCCTCGTAG 60.136 57.143 0.00 0.00 42.27 3.51
375 376 0.881118 GTTGTCCACGTACCCTCGTA 59.119 55.000 0.00 0.00 42.27 3.43
376 377 1.108727 TGTTGTCCACGTACCCTCGT 61.109 55.000 0.00 0.00 45.10 4.18
377 378 0.665369 GTGTTGTCCACGTACCCTCG 60.665 60.000 0.00 0.00 33.61 4.63
378 379 3.206090 GTGTTGTCCACGTACCCTC 57.794 57.895 0.00 0.00 33.61 4.30
386 387 0.765510 AGGGGAAGAGTGTTGTCCAC 59.234 55.000 0.00 0.00 44.89 4.02
387 388 1.056660 GAGGGGAAGAGTGTTGTCCA 58.943 55.000 0.00 0.00 32.70 4.02
388 389 1.276705 GAGAGGGGAAGAGTGTTGTCC 59.723 57.143 0.00 0.00 0.00 4.02
389 390 1.067495 CGAGAGGGGAAGAGTGTTGTC 60.067 57.143 0.00 0.00 0.00 3.18
390 391 0.969894 CGAGAGGGGAAGAGTGTTGT 59.030 55.000 0.00 0.00 0.00 3.32
391 392 0.969894 ACGAGAGGGGAAGAGTGTTG 59.030 55.000 0.00 0.00 0.00 3.33
392 393 1.344763 CAACGAGAGGGGAAGAGTGTT 59.655 52.381 0.00 0.00 0.00 3.32
393 394 0.969894 CAACGAGAGGGGAAGAGTGT 59.030 55.000 0.00 0.00 0.00 3.55
394 395 0.390472 GCAACGAGAGGGGAAGAGTG 60.390 60.000 0.00 0.00 0.00 3.51
395 396 0.543174 AGCAACGAGAGGGGAAGAGT 60.543 55.000 0.00 0.00 0.00 3.24
396 397 1.475403 TAGCAACGAGAGGGGAAGAG 58.525 55.000 0.00 0.00 0.00 2.85
397 398 1.757118 CATAGCAACGAGAGGGGAAGA 59.243 52.381 0.00 0.00 0.00 2.87
398 399 1.808133 GCATAGCAACGAGAGGGGAAG 60.808 57.143 0.00 0.00 0.00 3.46
399 400 0.178068 GCATAGCAACGAGAGGGGAA 59.822 55.000 0.00 0.00 0.00 3.97
400 401 0.975556 TGCATAGCAACGAGAGGGGA 60.976 55.000 0.00 0.00 34.76 4.81
401 402 0.107456 ATGCATAGCAACGAGAGGGG 59.893 55.000 0.00 0.00 43.62 4.79
402 403 1.202568 TGATGCATAGCAACGAGAGGG 60.203 52.381 0.00 0.00 43.62 4.30
403 404 1.863454 GTGATGCATAGCAACGAGAGG 59.137 52.381 0.00 0.00 43.62 3.69
404 405 1.863454 GGTGATGCATAGCAACGAGAG 59.137 52.381 0.00 0.00 43.62 3.20
405 406 1.206849 TGGTGATGCATAGCAACGAGA 59.793 47.619 0.00 0.00 43.62 4.04
406 407 1.655484 TGGTGATGCATAGCAACGAG 58.345 50.000 0.00 0.00 43.62 4.18
407 408 1.941975 CATGGTGATGCATAGCAACGA 59.058 47.619 0.00 0.00 43.62 3.85
408 409 1.941975 TCATGGTGATGCATAGCAACG 59.058 47.619 0.00 1.35 43.62 4.10
409 410 3.819337 AGATCATGGTGATGCATAGCAAC 59.181 43.478 0.00 0.00 43.62 4.17
410 411 4.094830 AGATCATGGTGATGCATAGCAA 57.905 40.909 0.00 0.00 43.62 3.91
411 412 3.782656 AGATCATGGTGATGCATAGCA 57.217 42.857 0.00 4.86 44.86 3.49
412 413 3.366070 GCAAGATCATGGTGATGCATAGC 60.366 47.826 0.00 0.00 37.20 2.97
413 414 3.120304 CGCAAGATCATGGTGATGCATAG 60.120 47.826 0.00 0.00 37.20 2.23
414 415 2.809696 CGCAAGATCATGGTGATGCATA 59.190 45.455 0.00 0.00 37.20 3.14
415 416 1.607148 CGCAAGATCATGGTGATGCAT 59.393 47.619 0.00 0.00 37.20 3.96
416 417 1.018910 CGCAAGATCATGGTGATGCA 58.981 50.000 11.83 0.00 37.20 3.96
417 418 1.019673 ACGCAAGATCATGGTGATGC 58.980 50.000 0.00 3.06 37.20 3.91
418 419 2.011947 ACACGCAAGATCATGGTGATG 58.988 47.619 19.56 8.58 37.20 3.07
419 420 2.011947 CACACGCAAGATCATGGTGAT 58.988 47.619 19.56 0.00 40.34 3.06
420 421 1.441738 CACACGCAAGATCATGGTGA 58.558 50.000 19.56 0.00 43.62 4.02
421 422 0.179181 GCACACGCAAGATCATGGTG 60.179 55.000 14.17 14.17 43.62 4.17
422 423 1.638388 CGCACACGCAAGATCATGGT 61.638 55.000 0.00 0.00 43.62 3.55
423 424 1.061411 CGCACACGCAAGATCATGG 59.939 57.895 0.00 0.00 43.62 3.66
424 425 0.998669 TACGCACACGCAAGATCATG 59.001 50.000 0.00 0.00 45.53 3.07
425 426 1.720805 TTACGCACACGCAAGATCAT 58.279 45.000 0.00 0.00 45.53 2.45
426 427 1.393196 CATTACGCACACGCAAGATCA 59.607 47.619 0.00 0.00 45.53 2.92
427 428 1.393539 ACATTACGCACACGCAAGATC 59.606 47.619 0.00 0.00 45.53 2.75
428 429 1.438651 ACATTACGCACACGCAAGAT 58.561 45.000 0.00 0.00 45.53 2.40
429 430 1.222300 AACATTACGCACACGCAAGA 58.778 45.000 0.00 0.00 45.53 3.02
430 431 2.031037 AAACATTACGCACACGCAAG 57.969 45.000 0.00 0.00 45.53 4.01
431 432 2.476873 AAAACATTACGCACACGCAA 57.523 40.000 0.00 0.00 45.53 4.85
432 433 2.476873 AAAAACATTACGCACACGCA 57.523 40.000 0.00 0.00 45.53 5.24
453 454 8.231837 GCAATGTTGAGGAACGTAGTAATTTTA 58.768 33.333 0.00 0.00 45.00 1.52
454 455 7.081976 GCAATGTTGAGGAACGTAGTAATTTT 58.918 34.615 0.00 0.00 45.00 1.82
455 456 6.608610 GCAATGTTGAGGAACGTAGTAATTT 58.391 36.000 0.00 0.00 45.00 1.82
456 457 5.163893 CGCAATGTTGAGGAACGTAGTAATT 60.164 40.000 0.00 0.00 45.00 1.40
457 458 4.328983 CGCAATGTTGAGGAACGTAGTAAT 59.671 41.667 0.00 0.00 45.00 1.89
458 459 3.676172 CGCAATGTTGAGGAACGTAGTAA 59.324 43.478 0.00 0.00 45.00 2.24
459 460 3.057386 TCGCAATGTTGAGGAACGTAGTA 60.057 43.478 0.00 0.00 45.00 1.82
461 462 2.333926 TCGCAATGTTGAGGAACGTAG 58.666 47.619 0.00 0.00 34.49 3.51
462 463 2.442212 TCGCAATGTTGAGGAACGTA 57.558 45.000 0.00 0.00 34.49 3.57
463 464 1.464608 CATCGCAATGTTGAGGAACGT 59.535 47.619 0.00 0.00 34.49 3.99
464 465 1.202065 CCATCGCAATGTTGAGGAACG 60.202 52.381 0.00 0.00 34.49 3.95
465 466 1.812571 ACCATCGCAATGTTGAGGAAC 59.187 47.619 0.00 0.00 0.00 3.62
466 467 2.198827 ACCATCGCAATGTTGAGGAA 57.801 45.000 0.00 0.00 0.00 3.36
467 468 3.558931 ATACCATCGCAATGTTGAGGA 57.441 42.857 0.00 0.00 0.00 3.71
468 469 5.749596 TTAATACCATCGCAATGTTGAGG 57.250 39.130 0.00 0.00 0.00 3.86
469 470 6.550843 TGTTTAATACCATCGCAATGTTGAG 58.449 36.000 0.00 0.00 0.00 3.02
470 471 6.502136 TGTTTAATACCATCGCAATGTTGA 57.498 33.333 0.00 0.00 0.00 3.18
471 472 7.026562 TCTTGTTTAATACCATCGCAATGTTG 58.973 34.615 0.00 0.00 0.00 3.33
472 473 7.151999 TCTTGTTTAATACCATCGCAATGTT 57.848 32.000 0.00 0.00 0.00 2.71
473 474 6.751514 TCTTGTTTAATACCATCGCAATGT 57.248 33.333 0.00 0.00 0.00 2.71
474 475 7.540400 TGTTTCTTGTTTAATACCATCGCAATG 59.460 33.333 0.00 0.00 0.00 2.82
524 525 1.408702 ACCAAAGTTGCCATGACACAC 59.591 47.619 0.00 0.00 0.00 3.82
543 544 7.389053 GGATCATGGTATCTAGAACATTTCCAC 59.611 40.741 18.06 3.50 0.00 4.02
631 760 7.390162 GCAAATTTTCTTTTGAATGGGACCATA 59.610 33.333 3.92 0.00 38.58 2.74
707 1095 6.625740 GCAAATGTAGTTTATGTGGCATGACT 60.626 38.462 0.00 0.00 0.00 3.41
716 1104 6.606796 TGGATCATGGCAAATGTAGTTTATGT 59.393 34.615 0.00 0.00 0.00 2.29
844 1364 3.328931 AGATGAGGAAAGAAGTTGGAGCA 59.671 43.478 0.00 0.00 0.00 4.26
846 1366 5.419239 AGAGATGAGGAAAGAAGTTGGAG 57.581 43.478 0.00 0.00 0.00 3.86
878 1399 2.265904 GCCCCCACGAAGGACAAAC 61.266 63.158 0.00 0.00 41.22 2.93
905 1428 2.267324 GAGGGGTGAGAGCAGTGC 59.733 66.667 7.13 7.13 0.00 4.40
917 1440 1.362584 AGAAGGAAAAATGGGGAGGGG 59.637 52.381 0.00 0.00 0.00 4.79
921 1444 2.109834 TGCAGAGAAGGAAAAATGGGGA 59.890 45.455 0.00 0.00 0.00 4.81
926 1449 2.893489 GGGTGTGCAGAGAAGGAAAAAT 59.107 45.455 0.00 0.00 0.00 1.82
927 1450 2.091885 AGGGTGTGCAGAGAAGGAAAAA 60.092 45.455 0.00 0.00 0.00 1.94
934 1457 1.194781 GGGAGAGGGTGTGCAGAGAA 61.195 60.000 0.00 0.00 0.00 2.87
980 1504 4.905866 CCATCGTCGTTGATTAAATCATGC 59.094 41.667 4.86 0.00 39.39 4.06
1012 1536 4.415332 CTCGACCACACCGACGGG 62.415 72.222 20.00 9.81 40.11 5.28
1056 1779 3.721035 TGTGATCGATGGTTCATAGCTG 58.279 45.455 0.54 0.00 0.00 4.24
1069 1792 2.802247 CAGTTTGCAACTCTGTGATCGA 59.198 45.455 17.58 0.00 40.46 3.59
1094 1817 1.895238 GCAGGTGCATCTTGCCATT 59.105 52.632 0.00 0.00 44.23 3.16
1095 1818 2.412323 CGCAGGTGCATCTTGCCAT 61.412 57.895 13.50 0.00 44.66 4.40
1240 1983 2.251371 GTCTTTGGCGTCGCAACC 59.749 61.111 20.50 1.91 0.00 3.77
1328 2610 3.819877 AACGGGGTGGTTCTCGCAC 62.820 63.158 0.00 0.00 0.00 5.34
1347 2634 0.102481 CTCGACCATCCAACGGGTAG 59.898 60.000 0.00 0.00 37.57 3.18
1350 2637 2.511600 GCTCGACCATCCAACGGG 60.512 66.667 0.00 0.00 0.00 5.28
1356 2643 2.105128 CGTGAGGCTCGACCATCC 59.895 66.667 10.42 0.00 43.14 3.51
1361 2648 3.909258 TTTCCGCGTGAGGCTCGAC 62.909 63.158 10.42 8.35 40.44 4.20
1363 2650 3.181967 CTTTCCGCGTGAGGCTCG 61.182 66.667 10.42 0.00 40.44 5.03
1368 2685 0.164647 CTTCTTGCTTTCCGCGTGAG 59.835 55.000 4.92 0.27 43.27 3.51
1369 2686 1.227999 CCTTCTTGCTTTCCGCGTGA 61.228 55.000 4.92 0.00 43.27 4.35
1426 2743 0.737715 GGTGACGCTGCCTTAGACAG 60.738 60.000 0.00 0.00 38.22 3.51
1428 2745 1.014564 GTGGTGACGCTGCCTTAGAC 61.015 60.000 0.00 0.00 38.02 2.59
1429 2746 1.292223 GTGGTGACGCTGCCTTAGA 59.708 57.895 0.00 0.00 38.02 2.10
1432 2749 3.923864 TCGTGGTGACGCTGCCTT 61.924 61.111 0.00 0.00 45.68 4.35
1478 2795 4.363990 CTGCTGGCTCCGTGACGT 62.364 66.667 3.64 0.00 0.00 4.34
1485 2802 1.524482 CTACCTTCCTGCTGGCTCC 59.476 63.158 4.42 0.00 0.00 4.70
1486 2803 1.153269 GCTACCTTCCTGCTGGCTC 60.153 63.158 4.42 0.00 0.00 4.70
1489 2806 0.615331 TGAAGCTACCTTCCTGCTGG 59.385 55.000 2.58 2.58 45.53 4.85
1490 2807 2.354259 CTTGAAGCTACCTTCCTGCTG 58.646 52.381 0.00 0.00 45.53 4.41
1491 2808 1.280421 CCTTGAAGCTACCTTCCTGCT 59.720 52.381 0.00 0.00 45.53 4.24
1497 2814 2.796557 GCCTTTCCTTGAAGCTACCTT 58.203 47.619 0.00 0.00 0.00 3.50
1501 2818 0.676782 GGCGCCTTTCCTTGAAGCTA 60.677 55.000 22.15 0.00 0.00 3.32
1504 2821 1.589716 CCTGGCGCCTTTCCTTGAAG 61.590 60.000 29.70 12.96 0.00 3.02
1506 2823 2.034066 CCTGGCGCCTTTCCTTGA 59.966 61.111 29.70 2.78 0.00 3.02
1508 2825 2.034221 GACCTGGCGCCTTTCCTT 59.966 61.111 29.70 5.57 0.00 3.36
1510 2827 2.282180 TTGACCTGGCGCCTTTCC 60.282 61.111 29.70 14.76 0.00 3.13
1511 2828 1.578206 GACTTGACCTGGCGCCTTTC 61.578 60.000 29.70 20.40 0.00 2.62
1512 2829 1.600916 GACTTGACCTGGCGCCTTT 60.601 57.895 29.70 11.76 0.00 3.11
1513 2830 2.032681 GACTTGACCTGGCGCCTT 59.967 61.111 29.70 12.18 0.00 4.35
1514 2831 3.241530 TGACTTGACCTGGCGCCT 61.242 61.111 29.70 7.33 0.00 5.52
1515 2832 2.743928 CTGACTTGACCTGGCGCC 60.744 66.667 22.73 22.73 0.00 6.53
1516 2833 3.426568 GCTGACTTGACCTGGCGC 61.427 66.667 0.00 0.00 0.00 6.53
1558 2891 4.467084 CCGGTGGTGTGGATCGGG 62.467 72.222 0.00 0.00 37.35 5.14
1643 2976 1.589113 GGCTAGGCTAGGCTCGATG 59.411 63.158 33.61 12.37 46.78 3.84
1644 2977 4.105388 GGCTAGGCTAGGCTCGAT 57.895 61.111 33.61 0.89 46.78 3.59
1671 3004 3.947841 CTCTCTCCGCTCGGCTCG 61.948 72.222 2.96 0.00 34.68 5.03
1672 3005 2.515057 TCTCTCTCCGCTCGGCTC 60.515 66.667 2.96 0.00 34.68 4.70
1673 3006 2.515991 CTCTCTCTCCGCTCGGCT 60.516 66.667 2.96 0.00 34.68 5.52
1674 3007 2.515057 TCTCTCTCTCCGCTCGGC 60.515 66.667 2.96 0.00 34.68 5.54
1675 3008 0.880278 CTCTCTCTCTCTCCGCTCGG 60.880 65.000 1.14 1.14 0.00 4.63
1676 3009 0.104120 TCTCTCTCTCTCTCCGCTCG 59.896 60.000 0.00 0.00 0.00 5.03
1677 3010 1.412710 TCTCTCTCTCTCTCTCCGCTC 59.587 57.143 0.00 0.00 0.00 5.03
1678 3011 1.414181 CTCTCTCTCTCTCTCTCCGCT 59.586 57.143 0.00 0.00 0.00 5.52
1679 3012 1.412710 TCTCTCTCTCTCTCTCTCCGC 59.587 57.143 0.00 0.00 0.00 5.54
1680 3013 2.543861 CGTCTCTCTCTCTCTCTCTCCG 60.544 59.091 0.00 0.00 0.00 4.63
1681 3014 2.693591 TCGTCTCTCTCTCTCTCTCTCC 59.306 54.545 0.00 0.00 0.00 3.71
1682 3015 3.797184 GCTCGTCTCTCTCTCTCTCTCTC 60.797 56.522 0.00 0.00 0.00 3.20
1683 3016 2.101582 GCTCGTCTCTCTCTCTCTCTCT 59.898 54.545 0.00 0.00 0.00 3.10
1684 3017 2.474816 GCTCGTCTCTCTCTCTCTCTC 58.525 57.143 0.00 0.00 0.00 3.20
1685 3018 1.139058 GGCTCGTCTCTCTCTCTCTCT 59.861 57.143 0.00 0.00 0.00 3.10
1686 3019 1.583054 GGCTCGTCTCTCTCTCTCTC 58.417 60.000 0.00 0.00 0.00 3.20
1687 3020 0.180406 GGGCTCGTCTCTCTCTCTCT 59.820 60.000 0.00 0.00 0.00 3.10
1688 3021 0.107410 TGGGCTCGTCTCTCTCTCTC 60.107 60.000 0.00 0.00 0.00 3.20
1689 3022 0.550914 ATGGGCTCGTCTCTCTCTCT 59.449 55.000 0.00 0.00 0.00 3.10
1690 3023 0.667993 CATGGGCTCGTCTCTCTCTC 59.332 60.000 0.00 0.00 0.00 3.20
1691 3024 1.391157 GCATGGGCTCGTCTCTCTCT 61.391 60.000 0.00 0.00 36.96 3.10
1692 3025 1.067250 GCATGGGCTCGTCTCTCTC 59.933 63.158 0.00 0.00 36.96 3.20
1693 3026 2.430610 GGCATGGGCTCGTCTCTCT 61.431 63.158 0.00 0.00 40.87 3.10
1694 3027 2.107953 GGCATGGGCTCGTCTCTC 59.892 66.667 0.00 0.00 40.87 3.20
1695 3028 3.842923 CGGCATGGGCTCGTCTCT 61.843 66.667 0.00 0.00 40.87 3.10
1696 3029 3.838271 TCGGCATGGGCTCGTCTC 61.838 66.667 0.00 0.00 40.87 3.36
1697 3030 4.148825 GTCGGCATGGGCTCGTCT 62.149 66.667 0.00 0.00 40.87 4.18
1734 3067 2.512692 TGAATGAATGGGTGGAGTGG 57.487 50.000 0.00 0.00 0.00 4.00
1735 3068 4.018490 TGAATGAATGAATGGGTGGAGTG 58.982 43.478 0.00 0.00 0.00 3.51
1761 3094 5.368145 TGAGCCGTATGATTAAAGCAGAAT 58.632 37.500 0.00 0.00 0.00 2.40
1762 3095 4.765273 TGAGCCGTATGATTAAAGCAGAA 58.235 39.130 0.00 0.00 0.00 3.02
1763 3096 4.400529 TGAGCCGTATGATTAAAGCAGA 57.599 40.909 0.00 0.00 0.00 4.26
1764 3097 4.143242 CGATGAGCCGTATGATTAAAGCAG 60.143 45.833 0.00 0.00 0.00 4.24
1766 3099 3.423645 GCGATGAGCCGTATGATTAAAGC 60.424 47.826 0.00 0.00 40.81 3.51
1778 3162 2.379634 TGTGAAACGCGATGAGCCG 61.380 57.895 15.93 0.00 44.76 5.52
1792 3176 1.616327 CTGGGGAGGGATGGTGTGA 60.616 63.158 0.00 0.00 0.00 3.58
1793 3177 3.001514 CTGGGGAGGGATGGTGTG 58.998 66.667 0.00 0.00 0.00 3.82
1812 3196 4.796231 CCGGTCGGTGAGGCGAAG 62.796 72.222 0.55 0.00 0.00 3.79
1866 3250 1.133253 CAAGCTTCACATCGTGGCG 59.867 57.895 0.00 0.00 33.87 5.69
1867 3251 0.955428 TCCAAGCTTCACATCGTGGC 60.955 55.000 0.00 0.00 33.87 5.01
1868 3252 1.081892 CTCCAAGCTTCACATCGTGG 58.918 55.000 0.00 0.00 33.87 4.94
1883 3271 0.619255 TATTTCCGGGTCCAGCTCCA 60.619 55.000 0.00 0.00 0.00 3.86
1884 3272 0.765510 ATATTTCCGGGTCCAGCTCC 59.234 55.000 0.00 0.00 0.00 4.70
1888 3276 1.949525 CAAGCATATTTCCGGGTCCAG 59.050 52.381 0.00 0.00 0.00 3.86
1894 3282 5.818136 TCTTTTCTCAAGCATATTTCCGG 57.182 39.130 0.00 0.00 0.00 5.14
1897 3285 7.599998 TGCCTTTTCTTTTCTCAAGCATATTTC 59.400 33.333 0.00 0.00 0.00 2.17
1900 3288 6.594788 TGCCTTTTCTTTTCTCAAGCATAT 57.405 33.333 0.00 0.00 0.00 1.78
1901 3289 6.403866 TTGCCTTTTCTTTTCTCAAGCATA 57.596 33.333 0.00 0.00 0.00 3.14
1902 3290 4.942761 TGCCTTTTCTTTTCTCAAGCAT 57.057 36.364 0.00 0.00 0.00 3.79
1903 3291 4.685924 CTTGCCTTTTCTTTTCTCAAGCA 58.314 39.130 0.00 0.00 0.00 3.91
1904 3292 3.492383 GCTTGCCTTTTCTTTTCTCAAGC 59.508 43.478 8.06 8.06 44.93 4.01
1905 3293 4.743644 CAGCTTGCCTTTTCTTTTCTCAAG 59.256 41.667 0.00 0.00 34.32 3.02
1906 3294 4.402155 TCAGCTTGCCTTTTCTTTTCTCAA 59.598 37.500 0.00 0.00 0.00 3.02
1907 3295 3.953612 TCAGCTTGCCTTTTCTTTTCTCA 59.046 39.130 0.00 0.00 0.00 3.27
1923 3327 9.481340 GTCAATCTTTTTCCTAAATTTCAGCTT 57.519 29.630 0.00 0.00 0.00 3.74
1932 3336 5.049954 CGTCGTGGTCAATCTTTTTCCTAAA 60.050 40.000 0.00 0.00 0.00 1.85
1933 3337 4.449743 CGTCGTGGTCAATCTTTTTCCTAA 59.550 41.667 0.00 0.00 0.00 2.69
1934 3338 3.991773 CGTCGTGGTCAATCTTTTTCCTA 59.008 43.478 0.00 0.00 0.00 2.94
1935 3339 2.806244 CGTCGTGGTCAATCTTTTTCCT 59.194 45.455 0.00 0.00 0.00 3.36
1936 3340 2.546789 ACGTCGTGGTCAATCTTTTTCC 59.453 45.455 0.00 0.00 0.00 3.13
1937 3341 3.541711 CACGTCGTGGTCAATCTTTTTC 58.458 45.455 17.75 0.00 0.00 2.29
1938 3342 2.286772 GCACGTCGTGGTCAATCTTTTT 60.287 45.455 25.70 0.00 33.64 1.94
1939 3343 1.263217 GCACGTCGTGGTCAATCTTTT 59.737 47.619 25.70 0.00 33.64 2.27
1940 3344 0.865769 GCACGTCGTGGTCAATCTTT 59.134 50.000 25.70 0.00 33.64 2.52
2000 3439 1.136169 GCCGCGATAAAAACAACTCGT 60.136 47.619 8.23 0.00 33.80 4.18
2056 3495 3.187227 GGATTATGTTATGCTGTGCGAGG 59.813 47.826 0.00 0.00 0.00 4.63
2058 3497 2.799978 CGGATTATGTTATGCTGTGCGA 59.200 45.455 0.00 0.00 0.00 5.10
2060 3499 2.662791 CGCGGATTATGTTATGCTGTGC 60.663 50.000 0.00 0.00 0.00 4.57
2099 3538 7.166167 ACGAGTGGTATCTTTCTTTGGTTATT 58.834 34.615 0.00 0.00 0.00 1.40
2100 3539 6.708285 ACGAGTGGTATCTTTCTTTGGTTAT 58.292 36.000 0.00 0.00 0.00 1.89
2106 3545 5.476614 GTGGTACGAGTGGTATCTTTCTTT 58.523 41.667 0.00 0.00 33.16 2.52
2127 3566 1.741401 TGCGAGGCATCTTTCGGTG 60.741 57.895 0.00 0.00 37.30 4.94
2163 3604 9.157104 TGATAATCGCTCGCCAAATAATAATAA 57.843 29.630 0.00 0.00 0.00 1.40
2218 3662 1.498865 CTCATTATCGCCGCACCACC 61.499 60.000 0.00 0.00 0.00 4.61
2219 3663 0.529773 TCTCATTATCGCCGCACCAC 60.530 55.000 0.00 0.00 0.00 4.16
2220 3664 0.176910 TTCTCATTATCGCCGCACCA 59.823 50.000 0.00 0.00 0.00 4.17
2236 3680 0.660595 CGCGCGTCCTTATCGATTCT 60.661 55.000 24.19 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.