Multiple sequence alignment - TraesCS6A01G287100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G287100 chr6A 100.000 2813 0 0 1 2813 519224494 519221682 0.000000e+00 5195
1 TraesCS6A01G287100 chr6A 91.824 159 13 0 2311 2469 405819790 405819632 3.650000e-54 222
2 TraesCS6A01G287100 chr6B 92.167 1966 95 29 1 1925 564218570 564216623 0.000000e+00 2723
3 TraesCS6A01G287100 chr6B 90.859 361 22 6 1944 2297 564216638 564216282 9.120000e-130 473
4 TraesCS6A01G287100 chr6B 92.949 156 11 0 2311 2466 1912000 1912155 7.840000e-56 228
5 TraesCS6A01G287100 chr6D 91.982 1958 100 22 1 1925 377831349 377829416 0.000000e+00 2693
6 TraesCS6A01G287100 chr6D 88.579 359 19 9 1946 2297 377829429 377829086 1.560000e-112 416
7 TraesCS6A01G287100 chr4B 89.919 248 25 0 2551 2798 528205372 528205619 1.260000e-83 320
8 TraesCS6A01G287100 chr4B 89.558 249 24 2 2551 2798 520625989 520625742 5.850000e-82 315
9 TraesCS6A01G287100 chr2B 89.919 248 24 1 2551 2798 549992838 549993084 4.520000e-83 318
10 TraesCS6A01G287100 chr1D 89.919 248 24 1 2551 2798 41571285 41571531 4.520000e-83 318
11 TraesCS6A01G287100 chr1D 92.357 157 12 0 2310 2466 374362857 374362701 1.010000e-54 224
12 TraesCS6A01G287100 chr5B 89.516 248 26 0 2551 2798 106544085 106543838 5.850000e-82 315
13 TraesCS6A01G287100 chr1B 89.516 248 26 0 2551 2798 92061660 92061413 5.850000e-82 315
14 TraesCS6A01G287100 chr1B 89.516 248 26 0 2551 2798 315418303 315418056 5.850000e-82 315
15 TraesCS6A01G287100 chr1B 89.516 248 26 0 2551 2798 477257111 477257358 5.850000e-82 315
16 TraesCS6A01G287100 chr2D 89.516 248 25 1 2551 2798 163792158 163792404 2.100000e-81 313
17 TraesCS6A01G287100 chr2D 92.949 156 11 0 2311 2466 533760519 533760364 7.840000e-56 228
18 TraesCS6A01G287100 chr3B 93.590 156 10 0 2311 2466 115642145 115641990 1.680000e-57 233
19 TraesCS6A01G287100 chr3D 92.949 156 11 0 2311 2466 211157304 211157149 7.840000e-56 228
20 TraesCS6A01G287100 chr3D 91.304 161 14 0 2306 2466 79378108 79377948 1.310000e-53 220
21 TraesCS6A01G287100 chr7B 92.308 156 12 0 2311 2466 716162563 716162718 3.650000e-54 222
22 TraesCS6A01G287100 chr4D 92.308 156 12 0 2311 2466 125531625 125531780 3.650000e-54 222


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G287100 chr6A 519221682 519224494 2812 True 5195.0 5195 100.0000 1 2813 1 chr6A.!!$R2 2812
1 TraesCS6A01G287100 chr6B 564216282 564218570 2288 True 1598.0 2723 91.5130 1 2297 2 chr6B.!!$R1 2296
2 TraesCS6A01G287100 chr6D 377829086 377831349 2263 True 1554.5 2693 90.2805 1 2297 2 chr6D.!!$R1 2296

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
524 534 0.094387 GCTTCTTCTTCGCGCTCTTG 59.906 55.0 5.56 0.0 0.0 3.02 F
527 537 0.109086 TCTTCTTCGCGCTCTTGGAG 60.109 55.0 5.56 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1347 1395 0.025001 CCGCGTACTTGAAATCTGCG 59.975 55.0 4.92 0.0 43.34 5.18 R
2140 2220 0.037734 TGGGTGACTAGCTCGACAGA 59.962 55.0 0.00 0.0 0.00 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 1.402720 CCAATTACAGCAACAAGGCCG 60.403 52.381 0.00 0.00 0.00 6.13
160 167 2.736721 GTGAGCACAAAACATAGCGAGA 59.263 45.455 0.00 0.00 0.00 4.04
194 204 4.344237 GGGGAATTCACCTGCTGG 57.656 61.111 20.11 8.29 36.20 4.85
524 534 0.094387 GCTTCTTCTTCGCGCTCTTG 59.906 55.000 5.56 0.00 0.00 3.02
527 537 0.109086 TCTTCTTCGCGCTCTTGGAG 60.109 55.000 5.56 0.00 0.00 3.86
644 667 1.002502 GTTCGGAGAGGGGTTTGGG 60.003 63.158 0.00 0.00 38.43 4.12
645 668 2.228480 TTCGGAGAGGGGTTTGGGG 61.228 63.158 0.00 0.00 38.43 4.96
653 676 2.675423 GGGTTTGGGGTTCTCCGC 60.675 66.667 0.00 0.00 45.39 5.54
668 691 0.904865 TCCGCAGAATCTGGTGGAGT 60.905 55.000 12.66 0.00 38.70 3.85
669 692 0.460987 CCGCAGAATCTGGTGGAGTC 60.461 60.000 12.66 0.00 39.10 3.36
672 695 2.480416 CGCAGAATCTGGTGGAGTCTAC 60.480 54.545 12.66 0.00 46.01 2.59
676 699 1.557099 ATCTGGTGGAGTCTACGCAA 58.443 50.000 0.01 0.00 0.00 4.85
678 701 1.000506 TCTGGTGGAGTCTACGCAAAC 59.999 52.381 0.01 0.00 0.00 2.93
685 709 5.050490 GTGGAGTCTACGCAAACATGATAT 58.950 41.667 0.00 0.00 0.00 1.63
697 721 6.412653 CGCAAACATGATATTTACCGTAAACC 59.587 38.462 5.86 0.56 0.00 3.27
701 725 5.754890 ACATGATATTTACCGTAAACCGACC 59.245 40.000 5.86 0.00 39.56 4.79
705 729 1.923356 TTACCGTAAACCGACCCTCT 58.077 50.000 0.00 0.00 39.56 3.69
717 741 2.593257 CGACCCTCTTTGACGTACTTC 58.407 52.381 0.00 0.00 0.00 3.01
718 742 2.593257 GACCCTCTTTGACGTACTTCG 58.407 52.381 0.00 0.00 46.00 3.79
721 745 2.415625 CCCTCTTTGACGTACTTCGAGG 60.416 54.545 12.21 12.21 42.86 4.63
739 763 1.486726 AGGAAATACGCCTCTCAAGGG 59.513 52.381 0.00 0.00 43.58 3.95
1012 1048 2.046023 CTCCAATGGCCAGCGTCA 60.046 61.111 13.05 0.00 0.00 4.35
1033 1069 4.754667 TCCTCGCTGCTGCTGCTG 62.755 66.667 25.43 16.73 40.48 4.41
1053 1089 4.631773 TGCTGCTGCATTCTCCTC 57.368 55.556 14.93 0.00 45.31 3.71
1203 1239 2.183555 GGCGACGTCCTGGGTAAG 59.816 66.667 10.58 0.00 0.00 2.34
1204 1240 2.508663 GCGACGTCCTGGGTAAGC 60.509 66.667 10.58 0.58 0.00 3.09
1255 1303 3.743396 CCCATAGCGCTCTTCTTGATTAC 59.257 47.826 16.34 0.00 0.00 1.89
1264 1312 2.747446 TCTTCTTGATTACCGCAAAGCC 59.253 45.455 0.00 0.00 0.00 4.35
1267 1315 3.945346 TCTTGATTACCGCAAAGCCTTA 58.055 40.909 0.00 0.00 0.00 2.69
1268 1316 4.523083 TCTTGATTACCGCAAAGCCTTAT 58.477 39.130 0.00 0.00 0.00 1.73
1270 1318 4.630894 TGATTACCGCAAAGCCTTATTG 57.369 40.909 0.00 0.00 0.00 1.90
1286 1334 8.305046 AGCCTTATTGCTTGATTTATTTGGTA 57.695 30.769 0.00 0.00 38.85 3.25
1287 1335 8.197439 AGCCTTATTGCTTGATTTATTTGGTAC 58.803 33.333 0.00 0.00 38.85 3.34
1288 1336 8.197439 GCCTTATTGCTTGATTTATTTGGTACT 58.803 33.333 0.00 0.00 0.00 2.73
1289 1337 9.736023 CCTTATTGCTTGATTTATTTGGTACTC 57.264 33.333 0.00 0.00 0.00 2.59
1290 1338 9.736023 CTTATTGCTTGATTTATTTGGTACTCC 57.264 33.333 0.00 0.00 0.00 3.85
1291 1339 7.961326 ATTGCTTGATTTATTTGGTACTCCT 57.039 32.000 0.00 0.00 34.23 3.69
1293 1341 6.245408 TGCTTGATTTATTTGGTACTCCTGT 58.755 36.000 0.00 0.00 34.23 4.00
1294 1342 6.374333 TGCTTGATTTATTTGGTACTCCTGTC 59.626 38.462 0.00 0.00 34.23 3.51
1295 1343 6.183360 GCTTGATTTATTTGGTACTCCTGTCC 60.183 42.308 0.00 0.00 34.23 4.02
1296 1344 6.636454 TGATTTATTTGGTACTCCTGTCCT 57.364 37.500 0.00 0.00 34.23 3.85
1297 1345 7.743116 TGATTTATTTGGTACTCCTGTCCTA 57.257 36.000 0.00 0.00 34.23 2.94
1298 1346 7.562135 TGATTTATTTGGTACTCCTGTCCTAC 58.438 38.462 0.00 0.00 34.23 3.18
1299 1347 6.938698 TTTATTTGGTACTCCTGTCCTACA 57.061 37.500 0.00 0.00 34.23 2.74
1300 1348 7.504926 TTTATTTGGTACTCCTGTCCTACAT 57.495 36.000 0.00 0.00 34.23 2.29
1301 1349 8.612486 TTTATTTGGTACTCCTGTCCTACATA 57.388 34.615 0.00 0.00 34.23 2.29
1302 1350 8.612486 TTATTTGGTACTCCTGTCCTACATAA 57.388 34.615 0.00 0.00 34.23 1.90
1303 1351 7.691993 ATTTGGTACTCCTGTCCTACATAAT 57.308 36.000 0.00 0.00 34.23 1.28
1304 1352 8.792830 ATTTGGTACTCCTGTCCTACATAATA 57.207 34.615 0.00 0.00 34.23 0.98
1305 1353 7.834881 TTGGTACTCCTGTCCTACATAATAG 57.165 40.000 0.00 0.00 34.23 1.73
1306 1354 6.919158 TGGTACTCCTGTCCTACATAATAGT 58.081 40.000 0.00 0.00 34.23 2.12
1307 1355 8.049165 TGGTACTCCTGTCCTACATAATAGTA 57.951 38.462 0.00 0.00 34.23 1.82
1770 1827 2.340078 GCGCTCTCCACTGTCACA 59.660 61.111 0.00 0.00 0.00 3.58
1888 1955 6.040166 TCGGTGTAGGGATTAATGTTAGTCTC 59.960 42.308 0.00 0.00 0.00 3.36
1921 1988 3.974642 GGTAATGGTAGGGAGGAACATCT 59.025 47.826 0.00 0.00 0.00 2.90
1922 1989 4.202367 GGTAATGGTAGGGAGGAACATCTG 60.202 50.000 0.00 0.00 0.00 2.90
1923 1990 2.642171 TGGTAGGGAGGAACATCTGT 57.358 50.000 0.00 0.00 0.00 3.41
1924 1991 2.915869 TGGTAGGGAGGAACATCTGTT 58.084 47.619 0.00 0.00 41.64 3.16
1961 2028 4.779993 AAGGGGAGGAACATCTGTTATC 57.220 45.455 0.00 0.00 38.56 1.75
2053 2125 9.883142 AAATGGAAATAAATTTCGCCTTATTGA 57.117 25.926 8.85 0.00 45.37 2.57
2064 2142 6.827586 TTCGCCTTATTGATTTGGTTTACT 57.172 33.333 0.00 0.00 0.00 2.24
2084 2162 1.662446 TCGCCGTTTTCCTGTCGAC 60.662 57.895 9.11 9.11 0.00 4.20
2093 2171 2.433838 CCTGTCGACCAGCAGCAG 60.434 66.667 14.12 1.24 40.06 4.24
2139 2219 4.845621 CATTTTGCCAATCGAAATGGTC 57.154 40.909 18.59 12.68 46.05 4.02
2140 2220 4.497300 CATTTTGCCAATCGAAATGGTCT 58.503 39.130 18.59 1.42 46.05 3.85
2155 2235 1.003233 TGGTCTCTGTCGAGCTAGTCA 59.997 52.381 0.00 0.00 37.19 3.41
2160 2240 1.107114 CTGTCGAGCTAGTCACCCAT 58.893 55.000 0.00 0.00 0.00 4.00
2176 2256 2.040545 ACCCATAAATTCGGTGTGGTCA 59.959 45.455 0.00 0.00 0.00 4.02
2229 2309 4.572389 GCATTTCCACTATTCTCGTGATGT 59.428 41.667 0.00 0.00 34.35 3.06
2297 2378 8.660373 GTTTTGTGTTGTTATTTTGTTCCATGA 58.340 29.630 0.00 0.00 0.00 3.07
2298 2379 8.417780 TTTGTGTTGTTATTTTGTTCCATGAG 57.582 30.769 0.00 0.00 0.00 2.90
2299 2380 5.982516 TGTGTTGTTATTTTGTTCCATGAGC 59.017 36.000 0.00 0.00 0.00 4.26
2300 2381 5.405269 GTGTTGTTATTTTGTTCCATGAGCC 59.595 40.000 0.00 0.00 0.00 4.70
2301 2382 5.069648 TGTTGTTATTTTGTTCCATGAGCCA 59.930 36.000 0.00 0.00 0.00 4.75
2302 2383 5.999205 TGTTATTTTGTTCCATGAGCCAT 57.001 34.783 0.00 0.00 0.00 4.40
2303 2384 5.964758 TGTTATTTTGTTCCATGAGCCATC 58.035 37.500 0.00 0.00 0.00 3.51
2304 2385 3.788333 ATTTTGTTCCATGAGCCATCG 57.212 42.857 0.00 0.00 0.00 3.84
2305 2386 2.488204 TTTGTTCCATGAGCCATCGA 57.512 45.000 0.00 0.00 0.00 3.59
2306 2387 2.715749 TTGTTCCATGAGCCATCGAT 57.284 45.000 0.00 0.00 0.00 3.59
2307 2388 3.836365 TTGTTCCATGAGCCATCGATA 57.164 42.857 0.00 0.00 0.00 2.92
2308 2389 4.356405 TTGTTCCATGAGCCATCGATAT 57.644 40.909 0.00 0.00 0.00 1.63
2309 2390 3.667360 TGTTCCATGAGCCATCGATATG 58.333 45.455 0.00 0.00 0.00 1.78
2320 2401 2.910199 CATCGATATGGGCCCTGTATG 58.090 52.381 25.70 13.66 0.00 2.39
2321 2402 1.275666 TCGATATGGGCCCTGTATGG 58.724 55.000 25.70 20.62 0.00 2.74
2322 2403 1.203250 TCGATATGGGCCCTGTATGGA 60.203 52.381 25.70 22.40 38.35 3.41
2323 2404 1.839994 CGATATGGGCCCTGTATGGAT 59.160 52.381 25.70 8.71 38.35 3.41
2324 2405 2.158900 CGATATGGGCCCTGTATGGATC 60.159 54.545 25.70 13.07 38.35 3.36
2325 2406 1.668826 TATGGGCCCTGTATGGATCC 58.331 55.000 25.70 4.20 38.35 3.36
2326 2407 0.403304 ATGGGCCCTGTATGGATCCA 60.403 55.000 25.70 18.88 40.20 3.41
2327 2408 0.403304 TGGGCCCTGTATGGATCCAT 60.403 55.000 29.66 29.66 40.19 3.41
2328 2409 0.038744 GGGCCCTGTATGGATCCATG 59.961 60.000 33.41 19.08 37.82 3.66
2329 2410 0.038744 GGCCCTGTATGGATCCATGG 59.961 60.000 33.41 26.18 37.82 3.66
2330 2411 0.038744 GCCCTGTATGGATCCATGGG 59.961 60.000 31.54 31.54 39.09 4.00
2331 2412 1.449271 CCCTGTATGGATCCATGGGT 58.551 55.000 33.41 13.89 37.82 4.51
2332 2413 1.782752 CCCTGTATGGATCCATGGGTT 59.217 52.381 33.41 13.51 37.82 4.11
2333 2414 2.986019 CCCTGTATGGATCCATGGGTTA 59.014 50.000 33.41 13.48 37.82 2.85
2334 2415 3.009473 CCCTGTATGGATCCATGGGTTAG 59.991 52.174 33.41 21.97 37.82 2.34
2335 2416 3.909995 CCTGTATGGATCCATGGGTTAGA 59.090 47.826 33.41 13.45 37.82 2.10
2336 2417 4.019860 CCTGTATGGATCCATGGGTTAGAG 60.020 50.000 33.41 21.04 37.82 2.43
2337 2418 4.566837 TGTATGGATCCATGGGTTAGAGT 58.433 43.478 33.41 9.79 37.82 3.24
2338 2419 4.975147 TGTATGGATCCATGGGTTAGAGTT 59.025 41.667 33.41 9.26 37.82 3.01
2339 2420 6.147473 TGTATGGATCCATGGGTTAGAGTTA 58.853 40.000 33.41 9.26 37.82 2.24
2340 2421 6.617784 TGTATGGATCCATGGGTTAGAGTTAA 59.382 38.462 33.41 9.05 37.82 2.01
2341 2422 6.786843 ATGGATCCATGGGTTAGAGTTAAT 57.213 37.500 26.78 0.00 35.03 1.40
2342 2423 6.590656 TGGATCCATGGGTTAGAGTTAATT 57.409 37.500 11.44 0.00 0.00 1.40
2343 2424 6.980577 TGGATCCATGGGTTAGAGTTAATTT 58.019 36.000 11.44 0.00 0.00 1.82
2344 2425 6.833416 TGGATCCATGGGTTAGAGTTAATTTG 59.167 38.462 11.44 0.00 0.00 2.32
2345 2426 6.833933 GGATCCATGGGTTAGAGTTAATTTGT 59.166 38.462 13.02 0.00 0.00 2.83
2346 2427 7.996644 GGATCCATGGGTTAGAGTTAATTTGTA 59.003 37.037 13.02 0.00 0.00 2.41
2347 2428 9.574516 GATCCATGGGTTAGAGTTAATTTGTAT 57.425 33.333 13.02 0.00 0.00 2.29
2348 2429 9.936329 ATCCATGGGTTAGAGTTAATTTGTATT 57.064 29.630 13.02 0.00 0.00 1.89
2367 2448 9.841295 TTTGTATTAGTTTGGACTCAACTAACT 57.159 29.630 7.28 0.00 37.33 2.24
2368 2449 9.485206 TTGTATTAGTTTGGACTCAACTAACTC 57.515 33.333 7.28 5.22 37.33 3.01
2369 2450 8.644216 TGTATTAGTTTGGACTCAACTAACTCA 58.356 33.333 7.28 7.17 37.33 3.41
2370 2451 9.485206 GTATTAGTTTGGACTCAACTAACTCAA 57.515 33.333 7.28 0.00 37.33 3.02
2371 2452 8.974060 ATTAGTTTGGACTCAACTAACTCAAA 57.026 30.769 7.28 0.00 37.33 2.69
2372 2453 8.795842 TTAGTTTGGACTCAACTAACTCAAAA 57.204 30.769 1.91 0.00 37.33 2.44
2373 2454 7.696992 AGTTTGGACTCAACTAACTCAAAAA 57.303 32.000 0.00 0.00 31.78 1.94
2374 2455 8.293699 AGTTTGGACTCAACTAACTCAAAAAT 57.706 30.769 0.00 0.00 31.78 1.82
2375 2456 9.403583 AGTTTGGACTCAACTAACTCAAAAATA 57.596 29.630 0.00 0.00 31.78 1.40
2378 2459 8.561738 TGGACTCAACTAACTCAAAAATATCC 57.438 34.615 0.00 0.00 0.00 2.59
2379 2460 8.160765 TGGACTCAACTAACTCAAAAATATCCA 58.839 33.333 0.00 0.00 0.00 3.41
2380 2461 9.010029 GGACTCAACTAACTCAAAAATATCCAA 57.990 33.333 0.00 0.00 0.00 3.53
2385 2466 9.410556 CAACTAACTCAAAAATATCCAAACAGG 57.589 33.333 0.00 0.00 39.47 4.00
2399 2480 4.584327 CAAACAGGAAGGTTAGTTTGGG 57.416 45.455 8.55 0.00 44.17 4.12
2400 2481 3.958147 CAAACAGGAAGGTTAGTTTGGGT 59.042 43.478 8.55 0.00 44.17 4.51
2401 2482 3.965470 ACAGGAAGGTTAGTTTGGGTT 57.035 42.857 0.00 0.00 0.00 4.11
2402 2483 5.391577 AACAGGAAGGTTAGTTTGGGTTA 57.608 39.130 0.00 0.00 0.00 2.85
2403 2484 4.981812 ACAGGAAGGTTAGTTTGGGTTAG 58.018 43.478 0.00 0.00 0.00 2.34
2404 2485 4.661709 ACAGGAAGGTTAGTTTGGGTTAGA 59.338 41.667 0.00 0.00 0.00 2.10
2405 2486 5.312443 ACAGGAAGGTTAGTTTGGGTTAGAT 59.688 40.000 0.00 0.00 0.00 1.98
2406 2487 5.648092 CAGGAAGGTTAGTTTGGGTTAGATG 59.352 44.000 0.00 0.00 0.00 2.90
2407 2488 4.398358 GGAAGGTTAGTTTGGGTTAGATGC 59.602 45.833 0.00 0.00 0.00 3.91
2408 2489 4.650972 AGGTTAGTTTGGGTTAGATGCA 57.349 40.909 0.00 0.00 0.00 3.96
2409 2490 5.193099 AGGTTAGTTTGGGTTAGATGCAT 57.807 39.130 0.00 0.00 0.00 3.96
2410 2491 5.193679 AGGTTAGTTTGGGTTAGATGCATC 58.806 41.667 19.37 19.37 0.00 3.91
2411 2492 5.044846 AGGTTAGTTTGGGTTAGATGCATCT 60.045 40.000 30.85 30.85 40.86 2.90
2412 2493 6.157994 AGGTTAGTTTGGGTTAGATGCATCTA 59.842 38.462 28.69 28.69 38.32 1.98
2413 2494 6.826741 GGTTAGTTTGGGTTAGATGCATCTAA 59.173 38.462 34.91 34.91 44.63 2.10
2424 2505 7.953005 TTAGATGCATCTAACCCATTCAAAA 57.047 32.000 34.91 17.58 42.66 2.44
2425 2506 6.855763 AGATGCATCTAACCCATTCAAAAA 57.144 33.333 27.73 0.00 34.85 1.94
2448 2529 8.664669 AAAATTTAATCCACCCAAGATGTACT 57.335 30.769 0.00 0.00 0.00 2.73
2449 2530 8.664669 AAATTTAATCCACCCAAGATGTACTT 57.335 30.769 0.00 0.00 39.70 2.24
2450 2531 9.762381 AAATTTAATCCACCCAAGATGTACTTA 57.238 29.630 0.00 0.00 37.03 2.24
2451 2532 9.936329 AATTTAATCCACCCAAGATGTACTTAT 57.064 29.630 0.00 0.00 37.03 1.73
2452 2533 9.936329 ATTTAATCCACCCAAGATGTACTTATT 57.064 29.630 0.00 0.00 37.03 1.40
2453 2534 9.762381 TTTAATCCACCCAAGATGTACTTATTT 57.238 29.630 0.00 0.00 37.03 1.40
2454 2535 7.645058 AATCCACCCAAGATGTACTTATTTG 57.355 36.000 0.00 0.00 37.03 2.32
2455 2536 5.505780 TCCACCCAAGATGTACTTATTTGG 58.494 41.667 13.50 13.50 37.03 3.28
2462 2543 8.575649 CCAAGATGTACTTATTTGGGTTAGTT 57.424 34.615 12.97 0.00 37.03 2.24
2463 2544 8.674607 CCAAGATGTACTTATTTGGGTTAGTTC 58.325 37.037 12.97 0.00 37.03 3.01
2464 2545 9.449719 CAAGATGTACTTATTTGGGTTAGTTCT 57.550 33.333 0.00 0.00 37.03 3.01
2502 2583 8.281212 ACTCAACCACATCTATTTATTTGACC 57.719 34.615 0.00 0.00 0.00 4.02
2503 2584 7.888021 ACTCAACCACATCTATTTATTTGACCA 59.112 33.333 0.00 0.00 0.00 4.02
2504 2585 8.821686 TCAACCACATCTATTTATTTGACCAT 57.178 30.769 0.00 0.00 0.00 3.55
2505 2586 8.902806 TCAACCACATCTATTTATTTGACCATC 58.097 33.333 0.00 0.00 0.00 3.51
2506 2587 7.823745 ACCACATCTATTTATTTGACCATCC 57.176 36.000 0.00 0.00 0.00 3.51
2507 2588 6.777580 ACCACATCTATTTATTTGACCATCCC 59.222 38.462 0.00 0.00 0.00 3.85
2508 2589 7.006509 CCACATCTATTTATTTGACCATCCCT 58.993 38.462 0.00 0.00 0.00 4.20
2509 2590 7.506938 CCACATCTATTTATTTGACCATCCCTT 59.493 37.037 0.00 0.00 0.00 3.95
2510 2591 8.355169 CACATCTATTTATTTGACCATCCCTTG 58.645 37.037 0.00 0.00 0.00 3.61
2511 2592 8.281531 ACATCTATTTATTTGACCATCCCTTGA 58.718 33.333 0.00 0.00 0.00 3.02
2512 2593 9.135189 CATCTATTTATTTGACCATCCCTTGAA 57.865 33.333 0.00 0.00 0.00 2.69
2513 2594 8.752005 TCTATTTATTTGACCATCCCTTGAAG 57.248 34.615 0.00 0.00 0.00 3.02
2514 2595 6.796785 ATTTATTTGACCATCCCTTGAAGG 57.203 37.500 3.69 3.69 35.43 3.46
2534 2615 3.166489 GGATCTCGTCCGAAACAATCT 57.834 47.619 0.00 0.00 37.23 2.40
2535 2616 2.860735 GGATCTCGTCCGAAACAATCTG 59.139 50.000 0.00 0.00 37.23 2.90
2536 2617 1.710013 TCTCGTCCGAAACAATCTGC 58.290 50.000 0.00 0.00 0.00 4.26
2537 2618 1.000394 TCTCGTCCGAAACAATCTGCA 60.000 47.619 0.00 0.00 0.00 4.41
2538 2619 1.798223 CTCGTCCGAAACAATCTGCAA 59.202 47.619 0.00 0.00 0.00 4.08
2539 2620 2.214347 TCGTCCGAAACAATCTGCAAA 58.786 42.857 0.00 0.00 0.00 3.68
2540 2621 2.614520 TCGTCCGAAACAATCTGCAAAA 59.385 40.909 0.00 0.00 0.00 2.44
2541 2622 3.252215 TCGTCCGAAACAATCTGCAAAAT 59.748 39.130 0.00 0.00 0.00 1.82
2542 2623 4.452795 TCGTCCGAAACAATCTGCAAAATA 59.547 37.500 0.00 0.00 0.00 1.40
2543 2624 5.049336 TCGTCCGAAACAATCTGCAAAATAA 60.049 36.000 0.00 0.00 0.00 1.40
2544 2625 5.627367 CGTCCGAAACAATCTGCAAAATAAA 59.373 36.000 0.00 0.00 0.00 1.40
2545 2626 6.183359 CGTCCGAAACAATCTGCAAAATAAAG 60.183 38.462 0.00 0.00 0.00 1.85
2546 2627 6.640907 GTCCGAAACAATCTGCAAAATAAAGT 59.359 34.615 0.00 0.00 0.00 2.66
2547 2628 6.861055 TCCGAAACAATCTGCAAAATAAAGTC 59.139 34.615 0.00 0.00 0.00 3.01
2548 2629 6.863126 CCGAAACAATCTGCAAAATAAAGTCT 59.137 34.615 0.00 0.00 0.00 3.24
2549 2630 8.020819 CCGAAACAATCTGCAAAATAAAGTCTA 58.979 33.333 0.00 0.00 0.00 2.59
2550 2631 9.055248 CGAAACAATCTGCAAAATAAAGTCTAG 57.945 33.333 0.00 0.00 0.00 2.43
2551 2632 9.346725 GAAACAATCTGCAAAATAAAGTCTAGG 57.653 33.333 0.00 0.00 0.00 3.02
2552 2633 7.396540 ACAATCTGCAAAATAAAGTCTAGGG 57.603 36.000 0.00 0.00 0.00 3.53
2553 2634 6.948309 ACAATCTGCAAAATAAAGTCTAGGGT 59.052 34.615 0.00 0.00 0.00 4.34
2554 2635 7.451566 ACAATCTGCAAAATAAAGTCTAGGGTT 59.548 33.333 0.00 0.00 0.00 4.11
2555 2636 8.956426 CAATCTGCAAAATAAAGTCTAGGGTTA 58.044 33.333 0.00 0.00 0.00 2.85
2556 2637 8.738645 ATCTGCAAAATAAAGTCTAGGGTTAG 57.261 34.615 0.00 0.00 0.00 2.34
2557 2638 7.686434 TCTGCAAAATAAAGTCTAGGGTTAGT 58.314 34.615 0.00 0.00 0.00 2.24
2558 2639 8.161425 TCTGCAAAATAAAGTCTAGGGTTAGTT 58.839 33.333 0.00 0.00 0.00 2.24
2559 2640 8.331730 TGCAAAATAAAGTCTAGGGTTAGTTC 57.668 34.615 0.00 0.00 0.00 3.01
2560 2641 8.161425 TGCAAAATAAAGTCTAGGGTTAGTTCT 58.839 33.333 0.00 0.00 0.00 3.01
2561 2642 9.011095 GCAAAATAAAGTCTAGGGTTAGTTCTT 57.989 33.333 0.00 0.00 0.00 2.52
2567 2648 8.678593 AAAGTCTAGGGTTAGTTCTTTTTGAG 57.321 34.615 0.00 0.00 33.30 3.02
2568 2649 7.613551 AGTCTAGGGTTAGTTCTTTTTGAGA 57.386 36.000 0.00 0.00 0.00 3.27
2569 2650 7.443477 AGTCTAGGGTTAGTTCTTTTTGAGAC 58.557 38.462 0.00 0.00 33.02 3.36
2570 2651 6.649973 GTCTAGGGTTAGTTCTTTTTGAGACC 59.350 42.308 0.00 0.00 33.02 3.85
2571 2652 5.382664 AGGGTTAGTTCTTTTTGAGACCA 57.617 39.130 0.00 0.00 33.02 4.02
2572 2653 5.953571 AGGGTTAGTTCTTTTTGAGACCAT 58.046 37.500 0.00 0.00 33.02 3.55
2573 2654 6.373759 AGGGTTAGTTCTTTTTGAGACCATT 58.626 36.000 0.00 0.00 33.02 3.16
2574 2655 7.523415 AGGGTTAGTTCTTTTTGAGACCATTA 58.477 34.615 0.00 0.00 33.02 1.90
2575 2656 8.002459 AGGGTTAGTTCTTTTTGAGACCATTAA 58.998 33.333 0.00 0.00 33.02 1.40
2576 2657 8.635328 GGGTTAGTTCTTTTTGAGACCATTAAA 58.365 33.333 0.00 0.00 33.02 1.52
2601 2682 9.920133 AAAAATATCTTTTTCTCTTGCTCTTCC 57.080 29.630 0.00 0.00 39.77 3.46
2602 2683 8.876303 AAATATCTTTTTCTCTTGCTCTTCCT 57.124 30.769 0.00 0.00 0.00 3.36
2603 2684 7.862512 ATATCTTTTTCTCTTGCTCTTCCTG 57.137 36.000 0.00 0.00 0.00 3.86
2604 2685 3.817647 TCTTTTTCTCTTGCTCTTCCTGC 59.182 43.478 0.00 0.00 0.00 4.85
2605 2686 2.936919 TTTCTCTTGCTCTTCCTGCA 57.063 45.000 0.00 0.00 38.80 4.41
2606 2687 2.469274 TTCTCTTGCTCTTCCTGCAG 57.531 50.000 6.78 6.78 41.71 4.41
2607 2688 0.036577 TCTCTTGCTCTTCCTGCAGC 60.037 55.000 8.66 0.00 41.71 5.25
2608 2689 0.321387 CTCTTGCTCTTCCTGCAGCA 60.321 55.000 8.66 0.00 44.02 4.41
2609 2690 0.321387 TCTTGCTCTTCCTGCAGCAG 60.321 55.000 16.23 16.23 46.18 4.24
2610 2691 0.321387 CTTGCTCTTCCTGCAGCAGA 60.321 55.000 24.90 10.79 46.18 4.26
2611 2692 0.327259 TTGCTCTTCCTGCAGCAGAT 59.673 50.000 24.90 0.00 46.18 2.90
2612 2693 0.107800 TGCTCTTCCTGCAGCAGATC 60.108 55.000 24.90 8.02 40.80 2.75
2613 2694 0.814812 GCTCTTCCTGCAGCAGATCC 60.815 60.000 24.90 2.13 35.56 3.36
2614 2695 0.179051 CTCTTCCTGCAGCAGATCCC 60.179 60.000 24.90 0.00 32.44 3.85
2615 2696 0.619832 TCTTCCTGCAGCAGATCCCT 60.620 55.000 24.90 0.00 32.44 4.20
2616 2697 0.179051 CTTCCTGCAGCAGATCCCTC 60.179 60.000 24.90 0.00 32.44 4.30
2617 2698 1.630126 TTCCTGCAGCAGATCCCTCC 61.630 60.000 24.90 0.00 32.44 4.30
2618 2699 2.509916 CTGCAGCAGATCCCTCCC 59.490 66.667 18.42 0.00 32.44 4.30
2619 2700 3.092511 TGCAGCAGATCCCTCCCC 61.093 66.667 0.00 0.00 0.00 4.81
2620 2701 3.092511 GCAGCAGATCCCTCCCCA 61.093 66.667 0.00 0.00 0.00 4.96
2621 2702 2.914289 CAGCAGATCCCTCCCCAC 59.086 66.667 0.00 0.00 0.00 4.61
2622 2703 1.692042 CAGCAGATCCCTCCCCACT 60.692 63.158 0.00 0.00 0.00 4.00
2623 2704 1.083706 AGCAGATCCCTCCCCACTT 59.916 57.895 0.00 0.00 0.00 3.16
2624 2705 0.985490 AGCAGATCCCTCCCCACTTC 60.985 60.000 0.00 0.00 0.00 3.01
2625 2706 1.988982 GCAGATCCCTCCCCACTTCC 61.989 65.000 0.00 0.00 0.00 3.46
2626 2707 0.327000 CAGATCCCTCCCCACTTCCT 60.327 60.000 0.00 0.00 0.00 3.36
2627 2708 0.030603 AGATCCCTCCCCACTTCCTC 60.031 60.000 0.00 0.00 0.00 3.71
2628 2709 0.326618 GATCCCTCCCCACTTCCTCA 60.327 60.000 0.00 0.00 0.00 3.86
2629 2710 0.621862 ATCCCTCCCCACTTCCTCAC 60.622 60.000 0.00 0.00 0.00 3.51
2630 2711 1.538876 CCCTCCCCACTTCCTCACA 60.539 63.158 0.00 0.00 0.00 3.58
2631 2712 1.557269 CCCTCCCCACTTCCTCACAG 61.557 65.000 0.00 0.00 0.00 3.66
2632 2713 1.298014 CTCCCCACTTCCTCACAGC 59.702 63.158 0.00 0.00 0.00 4.40
2633 2714 1.152030 TCCCCACTTCCTCACAGCT 60.152 57.895 0.00 0.00 0.00 4.24
2634 2715 0.768221 TCCCCACTTCCTCACAGCTT 60.768 55.000 0.00 0.00 0.00 3.74
2635 2716 0.322008 CCCCACTTCCTCACAGCTTC 60.322 60.000 0.00 0.00 0.00 3.86
2636 2717 0.689623 CCCACTTCCTCACAGCTTCT 59.310 55.000 0.00 0.00 0.00 2.85
2637 2718 1.072965 CCCACTTCCTCACAGCTTCTT 59.927 52.381 0.00 0.00 0.00 2.52
2638 2719 2.149578 CCACTTCCTCACAGCTTCTTG 58.850 52.381 0.00 0.00 0.00 3.02
2639 2720 2.486191 CCACTTCCTCACAGCTTCTTGT 60.486 50.000 0.00 0.00 0.00 3.16
2640 2721 2.805099 CACTTCCTCACAGCTTCTTGTC 59.195 50.000 0.00 0.00 0.00 3.18
2641 2722 2.224402 ACTTCCTCACAGCTTCTTGTCC 60.224 50.000 0.00 0.00 0.00 4.02
2642 2723 1.722034 TCCTCACAGCTTCTTGTCCT 58.278 50.000 0.00 0.00 0.00 3.85
2643 2724 1.620819 TCCTCACAGCTTCTTGTCCTC 59.379 52.381 0.00 0.00 0.00 3.71
2644 2725 1.622811 CCTCACAGCTTCTTGTCCTCT 59.377 52.381 0.00 0.00 0.00 3.69
2645 2726 2.353605 CCTCACAGCTTCTTGTCCTCTC 60.354 54.545 0.00 0.00 0.00 3.20
2646 2727 1.620819 TCACAGCTTCTTGTCCTCTCC 59.379 52.381 0.00 0.00 0.00 3.71
2647 2728 0.980423 ACAGCTTCTTGTCCTCTCCC 59.020 55.000 0.00 0.00 0.00 4.30
2648 2729 1.274712 CAGCTTCTTGTCCTCTCCCT 58.725 55.000 0.00 0.00 0.00 4.20
2649 2730 1.206849 CAGCTTCTTGTCCTCTCCCTC 59.793 57.143 0.00 0.00 0.00 4.30
2650 2731 0.539518 GCTTCTTGTCCTCTCCCTCC 59.460 60.000 0.00 0.00 0.00 4.30
2651 2732 1.199615 CTTCTTGTCCTCTCCCTCCC 58.800 60.000 0.00 0.00 0.00 4.30
2652 2733 0.793617 TTCTTGTCCTCTCCCTCCCT 59.206 55.000 0.00 0.00 0.00 4.20
2653 2734 0.041833 TCTTGTCCTCTCCCTCCCTG 59.958 60.000 0.00 0.00 0.00 4.45
2654 2735 1.613630 TTGTCCTCTCCCTCCCTGC 60.614 63.158 0.00 0.00 0.00 4.85
2655 2736 2.766229 GTCCTCTCCCTCCCTGCC 60.766 72.222 0.00 0.00 0.00 4.85
2656 2737 2.955246 TCCTCTCCCTCCCTGCCT 60.955 66.667 0.00 0.00 0.00 4.75
2657 2738 2.445654 CCTCTCCCTCCCTGCCTC 60.446 72.222 0.00 0.00 0.00 4.70
2658 2739 2.695597 CTCTCCCTCCCTGCCTCT 59.304 66.667 0.00 0.00 0.00 3.69
2659 2740 1.457455 CTCTCCCTCCCTGCCTCTC 60.457 68.421 0.00 0.00 0.00 3.20
2660 2741 2.837291 CTCCCTCCCTGCCTCTCG 60.837 72.222 0.00 0.00 0.00 4.04
2663 2744 4.154347 CCTCCCTGCCTCTCGCAC 62.154 72.222 0.00 0.00 44.64 5.34
2664 2745 3.073735 CTCCCTGCCTCTCGCACT 61.074 66.667 0.00 0.00 44.64 4.40
2665 2746 3.368190 CTCCCTGCCTCTCGCACTG 62.368 68.421 0.00 0.00 44.64 3.66
2672 2753 4.056125 CTCTCGCACTGCCCGTGA 62.056 66.667 7.36 0.00 46.81 4.35
2673 2754 3.573772 CTCTCGCACTGCCCGTGAA 62.574 63.158 7.36 0.00 46.81 3.18
2674 2755 3.114616 CTCGCACTGCCCGTGAAG 61.115 66.667 7.36 0.87 46.81 3.02
2675 2756 3.573772 CTCGCACTGCCCGTGAAGA 62.574 63.158 7.36 5.02 46.81 2.87
2676 2757 3.414700 CGCACTGCCCGTGAAGAC 61.415 66.667 7.36 0.00 46.81 3.01
2677 2758 3.414700 GCACTGCCCGTGAAGACG 61.415 66.667 7.36 0.00 46.81 4.18
2678 2759 2.029073 CACTGCCCGTGAAGACGT 59.971 61.111 0.00 0.00 46.81 4.34
2679 2760 2.022129 CACTGCCCGTGAAGACGTC 61.022 63.158 7.70 7.70 46.81 4.34
2680 2761 2.201022 ACTGCCCGTGAAGACGTCT 61.201 57.895 13.58 13.58 44.54 4.18
2681 2762 1.444553 CTGCCCGTGAAGACGTCTC 60.445 63.158 20.33 12.81 44.54 3.36
2682 2763 2.504244 GCCCGTGAAGACGTCTCG 60.504 66.667 20.33 17.73 44.54 4.04
2683 2764 2.504244 CCCGTGAAGACGTCTCGC 60.504 66.667 20.33 16.74 44.54 5.03
2684 2765 2.504244 CCGTGAAGACGTCTCGCC 60.504 66.667 20.33 11.70 44.54 5.54
2685 2766 2.870161 CGTGAAGACGTCTCGCCG 60.870 66.667 20.33 16.34 40.91 6.46
2686 2767 2.254651 GTGAAGACGTCTCGCCGT 59.745 61.111 20.33 1.66 45.18 5.68
2687 2768 1.499056 GTGAAGACGTCTCGCCGTA 59.501 57.895 20.33 0.00 41.98 4.02
2688 2769 0.098376 GTGAAGACGTCTCGCCGTAT 59.902 55.000 20.33 0.00 41.98 3.06
2689 2770 0.376152 TGAAGACGTCTCGCCGTATC 59.624 55.000 20.33 11.29 41.98 2.24
2690 2771 0.316854 GAAGACGTCTCGCCGTATCC 60.317 60.000 20.33 0.00 41.98 2.59
2691 2772 2.044832 AAGACGTCTCGCCGTATCCG 62.045 60.000 20.33 0.00 41.98 4.18
2692 2773 4.247612 ACGTCTCGCCGTATCCGC 62.248 66.667 0.00 0.00 39.73 5.54
2699 2780 4.664677 GCCGTATCCGCGCTCCAT 62.665 66.667 5.56 0.00 0.00 3.41
2700 2781 2.430921 CCGTATCCGCGCTCCATC 60.431 66.667 5.56 0.00 0.00 3.51
2701 2782 2.645567 CGTATCCGCGCTCCATCT 59.354 61.111 5.56 0.00 0.00 2.90
2702 2783 1.583495 CCGTATCCGCGCTCCATCTA 61.583 60.000 5.56 0.00 0.00 1.98
2703 2784 0.240145 CGTATCCGCGCTCCATCTAA 59.760 55.000 5.56 0.00 0.00 2.10
2704 2785 1.699343 GTATCCGCGCTCCATCTAAC 58.301 55.000 5.56 0.00 0.00 2.34
2705 2786 0.601558 TATCCGCGCTCCATCTAACC 59.398 55.000 5.56 0.00 0.00 2.85
2706 2787 2.100879 ATCCGCGCTCCATCTAACCC 62.101 60.000 5.56 0.00 0.00 4.11
2707 2788 2.797278 CCGCGCTCCATCTAACCCT 61.797 63.158 5.56 0.00 0.00 4.34
2708 2789 1.461091 CCGCGCTCCATCTAACCCTA 61.461 60.000 5.56 0.00 0.00 3.53
2709 2790 0.318784 CGCGCTCCATCTAACCCTAC 60.319 60.000 5.56 0.00 0.00 3.18
2710 2791 0.033642 GCGCTCCATCTAACCCTACC 59.966 60.000 0.00 0.00 0.00 3.18
2711 2792 1.410004 CGCTCCATCTAACCCTACCA 58.590 55.000 0.00 0.00 0.00 3.25
2712 2793 1.971357 CGCTCCATCTAACCCTACCAT 59.029 52.381 0.00 0.00 0.00 3.55
2713 2794 2.028930 CGCTCCATCTAACCCTACCATC 60.029 54.545 0.00 0.00 0.00 3.51
2714 2795 2.303311 GCTCCATCTAACCCTACCATCC 59.697 54.545 0.00 0.00 0.00 3.51
2715 2796 3.587498 CTCCATCTAACCCTACCATCCA 58.413 50.000 0.00 0.00 0.00 3.41
2716 2797 3.973973 CTCCATCTAACCCTACCATCCAA 59.026 47.826 0.00 0.00 0.00 3.53
2717 2798 4.376223 TCCATCTAACCCTACCATCCAAA 58.624 43.478 0.00 0.00 0.00 3.28
2718 2799 4.165372 TCCATCTAACCCTACCATCCAAAC 59.835 45.833 0.00 0.00 0.00 2.93
2719 2800 4.080015 CCATCTAACCCTACCATCCAAACA 60.080 45.833 0.00 0.00 0.00 2.83
2720 2801 4.563140 TCTAACCCTACCATCCAAACAC 57.437 45.455 0.00 0.00 0.00 3.32
2721 2802 2.597578 AACCCTACCATCCAAACACC 57.402 50.000 0.00 0.00 0.00 4.16
2722 2803 1.755200 ACCCTACCATCCAAACACCT 58.245 50.000 0.00 0.00 0.00 4.00
2723 2804 1.633945 ACCCTACCATCCAAACACCTC 59.366 52.381 0.00 0.00 0.00 3.85
2724 2805 1.916181 CCCTACCATCCAAACACCTCT 59.084 52.381 0.00 0.00 0.00 3.69
2725 2806 2.092914 CCCTACCATCCAAACACCTCTC 60.093 54.545 0.00 0.00 0.00 3.20
2726 2807 2.840651 CCTACCATCCAAACACCTCTCT 59.159 50.000 0.00 0.00 0.00 3.10
2727 2808 4.030913 CCTACCATCCAAACACCTCTCTA 58.969 47.826 0.00 0.00 0.00 2.43
2728 2809 4.100189 CCTACCATCCAAACACCTCTCTAG 59.900 50.000 0.00 0.00 0.00 2.43
2729 2810 2.237392 ACCATCCAAACACCTCTCTAGC 59.763 50.000 0.00 0.00 0.00 3.42
2730 2811 2.503356 CCATCCAAACACCTCTCTAGCT 59.497 50.000 0.00 0.00 0.00 3.32
2731 2812 3.706594 CCATCCAAACACCTCTCTAGCTA 59.293 47.826 0.00 0.00 0.00 3.32
2732 2813 4.202202 CCATCCAAACACCTCTCTAGCTAG 60.202 50.000 15.01 15.01 0.00 3.42
2733 2814 4.317530 TCCAAACACCTCTCTAGCTAGA 57.682 45.455 22.01 22.01 0.00 2.43
2747 2828 7.399245 CTCTAGCTAGAGTTAGTTCAAGGTT 57.601 40.000 33.77 0.00 43.71 3.50
2748 2829 8.508883 CTCTAGCTAGAGTTAGTTCAAGGTTA 57.491 38.462 33.77 4.89 43.71 2.85
2749 2830 8.508883 TCTAGCTAGAGTTAGTTCAAGGTTAG 57.491 38.462 19.72 0.00 31.81 2.34
2750 2831 8.327271 TCTAGCTAGAGTTAGTTCAAGGTTAGA 58.673 37.037 19.72 0.00 31.81 2.10
2751 2832 7.778185 AGCTAGAGTTAGTTCAAGGTTAGAA 57.222 36.000 0.00 0.00 0.00 2.10
2752 2833 8.368962 AGCTAGAGTTAGTTCAAGGTTAGAAT 57.631 34.615 0.00 0.00 0.00 2.40
2753 2834 8.471609 AGCTAGAGTTAGTTCAAGGTTAGAATC 58.528 37.037 0.00 0.00 0.00 2.52
2754 2835 8.471609 GCTAGAGTTAGTTCAAGGTTAGAATCT 58.528 37.037 0.00 0.00 0.00 2.40
2766 2847 8.925338 TCAAGGTTAGAATCTAACTCTAATCCC 58.075 37.037 26.42 11.98 37.25 3.85
2767 2848 8.929487 CAAGGTTAGAATCTAACTCTAATCCCT 58.071 37.037 26.42 13.74 37.25 4.20
2787 2868 9.725206 AATCCCTAACTAAGTTAGAGTATCCAA 57.275 33.333 16.89 0.00 45.73 3.53
2788 2869 9.725206 ATCCCTAACTAAGTTAGAGTATCCAAA 57.275 33.333 16.89 0.00 45.73 3.28
2789 2870 8.975295 TCCCTAACTAAGTTAGAGTATCCAAAC 58.025 37.037 16.89 0.00 45.73 2.93
2790 2871 8.755977 CCCTAACTAAGTTAGAGTATCCAAACA 58.244 37.037 16.89 0.00 45.73 2.83
2791 2872 9.804758 CCTAACTAAGTTAGAGTATCCAAACAG 57.195 37.037 16.89 0.00 45.73 3.16
2792 2873 9.804758 CTAACTAAGTTAGAGTATCCAAACAGG 57.195 37.037 16.89 0.00 45.73 4.00
2793 2874 7.184067 ACTAAGTTAGAGTATCCAAACAGGG 57.816 40.000 16.89 0.00 34.84 4.45
2794 2875 4.489306 AGTTAGAGTATCCAAACAGGGC 57.511 45.455 0.00 0.00 34.84 5.19
2795 2876 3.200165 AGTTAGAGTATCCAAACAGGGCC 59.800 47.826 0.00 0.00 34.84 5.80
2796 2877 1.668826 AGAGTATCCAAACAGGGCCA 58.331 50.000 6.18 0.00 38.24 5.36
2797 2878 2.208872 AGAGTATCCAAACAGGGCCAT 58.791 47.619 6.18 0.00 38.24 4.40
2798 2879 2.092212 AGAGTATCCAAACAGGGCCATG 60.092 50.000 17.55 17.55 38.24 3.66
2799 2880 1.922447 AGTATCCAAACAGGGCCATGA 59.078 47.619 26.87 0.06 38.24 3.07
2800 2881 2.311542 AGTATCCAAACAGGGCCATGAA 59.688 45.455 26.87 4.02 38.24 2.57
2801 2882 1.560505 ATCCAAACAGGGCCATGAAC 58.439 50.000 26.87 0.00 38.24 3.18
2802 2883 0.482446 TCCAAACAGGGCCATGAACT 59.518 50.000 26.87 4.88 38.24 3.01
2803 2884 1.133199 TCCAAACAGGGCCATGAACTT 60.133 47.619 26.87 11.23 38.24 2.66
2804 2885 1.001181 CCAAACAGGGCCATGAACTTG 59.999 52.381 26.87 21.41 0.00 3.16
2805 2886 1.688197 CAAACAGGGCCATGAACTTGT 59.312 47.619 26.87 0.00 0.00 3.16
2806 2887 2.086610 AACAGGGCCATGAACTTGTT 57.913 45.000 26.87 3.22 0.00 2.83
2807 2888 1.620822 ACAGGGCCATGAACTTGTTC 58.379 50.000 26.87 6.56 0.00 3.18
2808 2889 1.133513 ACAGGGCCATGAACTTGTTCA 60.134 47.619 26.87 17.00 35.15 3.18
2809 2890 2.173519 CAGGGCCATGAACTTGTTCAT 58.826 47.619 13.35 19.61 41.99 2.57
2810 2891 2.564062 CAGGGCCATGAACTTGTTCATT 59.436 45.455 21.91 8.52 39.47 2.57
2811 2892 2.827921 AGGGCCATGAACTTGTTCATTC 59.172 45.455 21.91 16.83 39.47 2.67
2812 2893 2.562298 GGGCCATGAACTTGTTCATTCA 59.438 45.455 21.91 2.39 39.47 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
65 66 7.965107 GGGATTATGCGATTCTTGATGATTTAC 59.035 37.037 0.00 0.00 0.00 2.01
113 114 9.761504 CACTAAGTAACATTGATGATCAGAGAT 57.238 33.333 0.09 0.00 0.00 2.75
160 167 1.413118 CCCTTGTCCTTGTTGCCTTT 58.587 50.000 0.00 0.00 0.00 3.11
194 204 0.247736 ACGAGATTCACAGCCTCACC 59.752 55.000 0.00 0.00 0.00 4.02
394 404 0.034960 CGAGTGGGAGGAGTCTCTGA 60.035 60.000 0.00 0.00 39.86 3.27
524 534 3.378399 GAACCCTCCGCAGCTCTCC 62.378 68.421 0.00 0.00 0.00 3.71
577 587 2.125552 TTGAGATGGCTGACGGCG 60.126 61.111 4.80 4.80 42.94 6.46
644 667 0.250513 ACCAGATTCTGCGGAGAACC 59.749 55.000 22.32 12.95 41.12 3.62
645 668 1.363744 CACCAGATTCTGCGGAGAAC 58.636 55.000 22.32 15.01 41.12 3.01
653 676 2.480416 GCGTAGACTCCACCAGATTCTG 60.480 54.545 6.70 6.70 35.43 3.02
654 677 1.751924 GCGTAGACTCCACCAGATTCT 59.248 52.381 0.00 0.00 38.09 2.40
668 691 6.044046 ACGGTAAATATCATGTTTGCGTAGA 58.956 36.000 0.00 0.00 0.00 2.59
669 692 6.281848 ACGGTAAATATCATGTTTGCGTAG 57.718 37.500 0.00 0.00 0.00 3.51
672 695 6.412653 GGTTTACGGTAAATATCATGTTTGCG 59.587 38.462 15.70 0.00 0.00 4.85
676 699 6.258507 GGTCGGTTTACGGTAAATATCATGTT 59.741 38.462 15.70 0.00 44.45 2.71
678 701 5.178067 GGGTCGGTTTACGGTAAATATCATG 59.822 44.000 15.70 4.21 44.45 3.07
685 709 2.247358 AGAGGGTCGGTTTACGGTAAA 58.753 47.619 9.18 9.18 44.45 2.01
697 721 2.593257 GAAGTACGTCAAAGAGGGTCG 58.407 52.381 3.75 0.00 0.00 4.79
701 725 2.486982 TCCTCGAAGTACGTCAAAGAGG 59.513 50.000 18.55 18.55 43.63 3.69
705 729 4.853196 CGTATTTCCTCGAAGTACGTCAAA 59.147 41.667 16.61 2.58 45.90 2.69
721 745 1.475213 CCCCCTTGAGAGGCGTATTTC 60.475 57.143 0.00 0.00 42.09 2.17
733 757 4.325972 GTTGAATACGTAAACCCCCTTGA 58.674 43.478 0.00 0.00 0.00 3.02
734 758 3.441222 GGTTGAATACGTAAACCCCCTTG 59.559 47.826 14.28 0.00 37.90 3.61
742 766 4.236935 GAGTCGTGGGTTGAATACGTAAA 58.763 43.478 0.00 0.00 38.80 2.01
941 967 3.259374 AGTGGTGTTGGTGTGAGATCTAG 59.741 47.826 0.00 0.00 0.00 2.43
985 1011 1.492176 GGCCATTGGAGAAGGATCAGA 59.508 52.381 6.95 0.00 0.00 3.27
1088 1124 4.710695 CGCCGACGCTGTACACCA 62.711 66.667 0.00 0.00 0.00 4.17
1202 1238 2.432628 GCGACGGTAACTGCTGCT 60.433 61.111 0.00 0.00 0.00 4.24
1203 1239 2.025359 GATGCGACGGTAACTGCTGC 62.025 60.000 0.00 0.00 0.00 5.25
1204 1240 1.421410 GGATGCGACGGTAACTGCTG 61.421 60.000 0.00 0.00 0.00 4.41
1264 1312 9.736023 GGAGTACCAAATAAATCAAGCAATAAG 57.264 33.333 0.00 0.00 35.97 1.73
1267 1315 7.397192 ACAGGAGTACCAAATAAATCAAGCAAT 59.603 33.333 0.00 0.00 38.94 3.56
1268 1316 6.719370 ACAGGAGTACCAAATAAATCAAGCAA 59.281 34.615 0.00 0.00 38.94 3.91
1270 1318 6.183360 GGACAGGAGTACCAAATAAATCAAGC 60.183 42.308 0.00 0.00 38.94 4.01
1275 1323 7.504926 TGTAGGACAGGAGTACCAAATAAAT 57.495 36.000 0.00 0.00 38.94 1.40
1278 1326 8.792830 ATTATGTAGGACAGGAGTACCAAATA 57.207 34.615 0.00 0.00 38.94 1.40
1282 1330 6.919158 ACTATTATGTAGGACAGGAGTACCA 58.081 40.000 0.00 0.00 38.94 3.25
1284 1332 9.571816 AGTTACTATTATGTAGGACAGGAGTAC 57.428 37.037 0.00 0.00 0.00 2.73
1286 1334 8.280084 TGAGTTACTATTATGTAGGACAGGAGT 58.720 37.037 0.00 0.00 0.00 3.85
1287 1335 8.569641 GTGAGTTACTATTATGTAGGACAGGAG 58.430 40.741 0.00 0.00 0.00 3.69
1288 1336 8.280084 AGTGAGTTACTATTATGTAGGACAGGA 58.720 37.037 0.00 0.00 38.04 3.86
1289 1337 8.466617 AGTGAGTTACTATTATGTAGGACAGG 57.533 38.462 0.00 0.00 38.04 4.00
1293 1341 7.919091 CGCAAAGTGAGTTACTATTATGTAGGA 59.081 37.037 0.00 0.00 39.18 2.94
1294 1342 7.705325 ACGCAAAGTGAGTTACTATTATGTAGG 59.295 37.037 0.00 0.00 39.18 3.18
1295 1343 8.630278 ACGCAAAGTGAGTTACTATTATGTAG 57.370 34.615 0.00 0.00 39.18 2.74
1296 1344 8.991243 AACGCAAAGTGAGTTACTATTATGTA 57.009 30.769 0.00 0.00 38.58 2.29
1297 1345 7.817962 AGAACGCAAAGTGAGTTACTATTATGT 59.182 33.333 0.00 0.00 40.39 2.29
1298 1346 8.186178 AGAACGCAAAGTGAGTTACTATTATG 57.814 34.615 0.00 0.00 40.39 1.90
1299 1347 8.656849 CAAGAACGCAAAGTGAGTTACTATTAT 58.343 33.333 0.00 0.00 40.39 1.28
1300 1348 7.868922 TCAAGAACGCAAAGTGAGTTACTATTA 59.131 33.333 0.00 0.00 40.39 0.98
1301 1349 6.704493 TCAAGAACGCAAAGTGAGTTACTATT 59.296 34.615 0.00 0.00 40.39 1.73
1302 1350 6.220930 TCAAGAACGCAAAGTGAGTTACTAT 58.779 36.000 0.00 0.00 40.39 2.12
1303 1351 5.593968 TCAAGAACGCAAAGTGAGTTACTA 58.406 37.500 0.00 0.00 40.39 1.82
1304 1352 4.439057 TCAAGAACGCAAAGTGAGTTACT 58.561 39.130 0.00 0.00 40.39 2.24
1305 1353 4.789095 TCAAGAACGCAAAGTGAGTTAC 57.211 40.909 0.00 0.00 40.39 2.50
1306 1354 5.525745 TGAATCAAGAACGCAAAGTGAGTTA 59.474 36.000 0.00 0.00 40.39 2.24
1307 1355 4.335315 TGAATCAAGAACGCAAAGTGAGTT 59.665 37.500 0.00 0.00 42.92 3.01
1347 1395 0.025001 CCGCGTACTTGAAATCTGCG 59.975 55.000 4.92 0.00 43.34 5.18
1457 1505 1.280206 CGTCCGGTCGAACTTGAACC 61.280 60.000 16.36 0.00 0.00 3.62
1783 1840 1.226688 CGATCATGGCGACGACACT 60.227 57.895 4.98 0.00 0.00 3.55
1888 1955 6.660800 TCCCTACCATTACCTATAGATCTCG 58.339 44.000 0.00 0.00 0.00 4.04
1937 2004 3.903530 ACAGATGTTCCTCCCCTTTTT 57.096 42.857 0.00 0.00 0.00 1.94
1938 2005 3.903530 AACAGATGTTCCTCCCCTTTT 57.096 42.857 0.00 0.00 31.64 2.27
1939 2006 4.384208 CGATAACAGATGTTCCTCCCCTTT 60.384 45.833 0.59 0.00 39.31 3.11
1940 2007 3.134804 CGATAACAGATGTTCCTCCCCTT 59.865 47.826 0.59 0.00 39.31 3.95
1941 2008 2.700897 CGATAACAGATGTTCCTCCCCT 59.299 50.000 0.59 0.00 39.31 4.79
1942 2009 2.698797 TCGATAACAGATGTTCCTCCCC 59.301 50.000 0.59 0.00 39.31 4.81
1943 2010 3.385111 ACTCGATAACAGATGTTCCTCCC 59.615 47.826 0.59 0.00 39.31 4.30
1944 2011 4.339814 AGACTCGATAACAGATGTTCCTCC 59.660 45.833 0.59 0.00 39.31 4.30
1945 2012 5.508200 AGACTCGATAACAGATGTTCCTC 57.492 43.478 0.59 0.48 39.31 3.71
1946 2013 5.923733 AAGACTCGATAACAGATGTTCCT 57.076 39.130 0.59 0.00 39.31 3.36
1947 2014 6.183360 ACCTAAGACTCGATAACAGATGTTCC 60.183 42.308 0.59 0.00 39.31 3.62
1948 2015 6.693545 CACCTAAGACTCGATAACAGATGTTC 59.306 42.308 0.59 0.00 39.31 3.18
1949 2016 6.377429 TCACCTAAGACTCGATAACAGATGTT 59.623 38.462 3.37 3.37 41.73 2.71
1950 2017 5.886474 TCACCTAAGACTCGATAACAGATGT 59.114 40.000 0.00 0.00 0.00 3.06
1951 2018 6.378710 TCACCTAAGACTCGATAACAGATG 57.621 41.667 0.00 0.00 0.00 2.90
1952 2019 7.589958 ATTCACCTAAGACTCGATAACAGAT 57.410 36.000 0.00 0.00 0.00 2.90
1953 2020 7.406031 AATTCACCTAAGACTCGATAACAGA 57.594 36.000 0.00 0.00 0.00 3.41
1954 2021 8.407064 AGTAATTCACCTAAGACTCGATAACAG 58.593 37.037 0.00 0.00 0.00 3.16
1955 2022 8.289939 AGTAATTCACCTAAGACTCGATAACA 57.710 34.615 0.00 0.00 0.00 2.41
1961 2028 5.583495 CCTGAGTAATTCACCTAAGACTCG 58.417 45.833 0.00 0.00 37.04 4.18
2049 2121 3.119990 CGGCGACAGTAAACCAAATCAAT 60.120 43.478 0.00 0.00 0.00 2.57
2051 2123 1.801771 CGGCGACAGTAAACCAAATCA 59.198 47.619 0.00 0.00 0.00 2.57
2052 2124 1.802365 ACGGCGACAGTAAACCAAATC 59.198 47.619 16.62 0.00 0.00 2.17
2053 2125 1.886886 ACGGCGACAGTAAACCAAAT 58.113 45.000 16.62 0.00 0.00 2.32
2054 2126 1.666054 AACGGCGACAGTAAACCAAA 58.334 45.000 16.62 0.00 0.00 3.28
2057 2135 1.069703 GGAAAACGGCGACAGTAAACC 60.070 52.381 16.62 1.96 0.00 3.27
2064 2142 1.952133 CGACAGGAAAACGGCGACA 60.952 57.895 16.62 0.00 0.00 4.35
2084 2162 2.185350 CCTACCGACTGCTGCTGG 59.815 66.667 11.29 5.50 0.00 4.85
2093 2171 1.744522 GTGAGAAGACCTCCTACCGAC 59.255 57.143 0.00 0.00 41.25 4.79
2140 2220 0.037734 TGGGTGACTAGCTCGACAGA 59.962 55.000 0.00 0.00 0.00 3.41
2155 2235 2.040545 TGACCACACCGAATTTATGGGT 59.959 45.455 0.00 0.00 34.56 4.51
2160 2240 3.659786 CAGTCTGACCACACCGAATTTA 58.340 45.455 3.76 0.00 0.00 1.40
2176 2256 2.968574 TCTGACTTCTTGGAAGCAGTCT 59.031 45.455 16.70 1.48 45.55 3.24
2229 2309 2.290896 CCCTACAAGATGGTGGCTGAAA 60.291 50.000 0.00 0.00 0.00 2.69
2300 2381 2.420547 CCATACAGGGCCCATATCGATG 60.421 54.545 27.56 14.44 0.00 3.84
2301 2382 1.839994 CCATACAGGGCCCATATCGAT 59.160 52.381 27.56 2.16 0.00 3.59
2302 2383 1.203250 TCCATACAGGGCCCATATCGA 60.203 52.381 27.56 16.24 38.24 3.59
2303 2384 1.275666 TCCATACAGGGCCCATATCG 58.724 55.000 27.56 14.09 38.24 2.92
2304 2385 2.173569 GGATCCATACAGGGCCCATATC 59.826 54.545 27.56 14.41 38.24 1.63
2305 2386 2.208872 GGATCCATACAGGGCCCATAT 58.791 52.381 27.56 18.54 38.24 1.78
2306 2387 1.132234 TGGATCCATACAGGGCCCATA 60.132 52.381 27.56 16.89 35.36 2.74
2307 2388 0.403304 TGGATCCATACAGGGCCCAT 60.403 55.000 27.56 14.91 35.36 4.00
2308 2389 0.403304 ATGGATCCATACAGGGCCCA 60.403 55.000 26.25 2.74 41.31 5.36
2309 2390 0.038744 CATGGATCCATACAGGGCCC 59.961 60.000 26.87 16.46 38.24 5.80
2310 2391 0.038744 CCATGGATCCATACAGGGCC 59.961 60.000 26.87 0.00 35.55 5.80
2311 2392 0.038744 CCCATGGATCCATACAGGGC 59.961 60.000 27.49 0.00 41.18 5.19
2312 2393 1.449271 ACCCATGGATCCATACAGGG 58.551 55.000 32.95 32.95 42.16 4.45
2313 2394 3.909995 TCTAACCCATGGATCCATACAGG 59.090 47.826 26.87 26.10 34.91 4.00
2314 2395 4.594920 ACTCTAACCCATGGATCCATACAG 59.405 45.833 26.87 19.19 34.91 2.74
2315 2396 4.566837 ACTCTAACCCATGGATCCATACA 58.433 43.478 26.87 9.38 34.91 2.29
2316 2397 5.568620 AACTCTAACCCATGGATCCATAC 57.431 43.478 26.87 0.00 34.91 2.39
2317 2398 7.888514 ATTAACTCTAACCCATGGATCCATA 57.111 36.000 26.87 10.36 34.91 2.74
2318 2399 6.786843 ATTAACTCTAACCCATGGATCCAT 57.213 37.500 22.15 22.15 37.08 3.41
2319 2400 6.590656 AATTAACTCTAACCCATGGATCCA 57.409 37.500 18.88 18.88 0.00 3.41
2320 2401 6.833933 ACAAATTAACTCTAACCCATGGATCC 59.166 38.462 15.22 4.20 0.00 3.36
2321 2402 7.881775 ACAAATTAACTCTAACCCATGGATC 57.118 36.000 15.22 0.00 0.00 3.36
2322 2403 9.936329 AATACAAATTAACTCTAACCCATGGAT 57.064 29.630 15.22 4.04 0.00 3.41
2341 2422 9.841295 AGTTAGTTGAGTCCAAACTAATACAAA 57.159 29.630 15.19 0.00 35.28 2.83
2342 2423 9.485206 GAGTTAGTTGAGTCCAAACTAATACAA 57.515 33.333 15.19 0.00 35.28 2.41
2343 2424 8.644216 TGAGTTAGTTGAGTCCAAACTAATACA 58.356 33.333 15.19 14.54 35.28 2.29
2344 2425 9.485206 TTGAGTTAGTTGAGTCCAAACTAATAC 57.515 33.333 15.19 12.95 35.28 1.89
2346 2427 8.974060 TTTGAGTTAGTTGAGTCCAAACTAAT 57.026 30.769 15.19 7.77 35.28 1.73
2347 2428 8.795842 TTTTGAGTTAGTTGAGTCCAAACTAA 57.204 30.769 10.32 10.32 35.28 2.24
2348 2429 8.795842 TTTTTGAGTTAGTTGAGTCCAAACTA 57.204 30.769 0.15 0.15 35.28 2.24
2349 2430 7.696992 TTTTTGAGTTAGTTGAGTCCAAACT 57.303 32.000 1.87 1.87 38.88 2.66
2352 2433 9.010029 GGATATTTTTGAGTTAGTTGAGTCCAA 57.990 33.333 0.00 0.00 0.00 3.53
2353 2434 8.160765 TGGATATTTTTGAGTTAGTTGAGTCCA 58.839 33.333 0.00 0.00 0.00 4.02
2354 2435 8.561738 TGGATATTTTTGAGTTAGTTGAGTCC 57.438 34.615 0.00 0.00 0.00 3.85
2359 2440 9.410556 CCTGTTTGGATATTTTTGAGTTAGTTG 57.589 33.333 0.00 0.00 38.35 3.16
2360 2441 9.362151 TCCTGTTTGGATATTTTTGAGTTAGTT 57.638 29.630 0.00 0.00 40.56 2.24
2361 2442 8.934023 TCCTGTTTGGATATTTTTGAGTTAGT 57.066 30.769 0.00 0.00 40.56 2.24
2362 2443 9.846248 CTTCCTGTTTGGATATTTTTGAGTTAG 57.154 33.333 0.00 0.00 45.68 2.34
2363 2444 8.802267 CCTTCCTGTTTGGATATTTTTGAGTTA 58.198 33.333 0.00 0.00 45.68 2.24
2364 2445 7.290014 ACCTTCCTGTTTGGATATTTTTGAGTT 59.710 33.333 0.00 0.00 45.68 3.01
2365 2446 6.782494 ACCTTCCTGTTTGGATATTTTTGAGT 59.218 34.615 0.00 0.00 45.68 3.41
2366 2447 7.232118 ACCTTCCTGTTTGGATATTTTTGAG 57.768 36.000 0.00 0.00 45.68 3.02
2367 2448 7.610580 AACCTTCCTGTTTGGATATTTTTGA 57.389 32.000 0.00 0.00 45.68 2.69
2368 2449 8.585018 ACTAACCTTCCTGTTTGGATATTTTTG 58.415 33.333 0.00 0.00 45.68 2.44
2369 2450 8.721133 ACTAACCTTCCTGTTTGGATATTTTT 57.279 30.769 0.00 0.00 45.68 1.94
2370 2451 8.721133 AACTAACCTTCCTGTTTGGATATTTT 57.279 30.769 0.00 0.00 45.68 1.82
2371 2452 8.585018 CAAACTAACCTTCCTGTTTGGATATTT 58.415 33.333 8.90 0.00 45.68 1.40
2372 2453 8.122472 CAAACTAACCTTCCTGTTTGGATATT 57.878 34.615 8.90 0.00 45.68 1.28
2373 2454 7.703058 CAAACTAACCTTCCTGTTTGGATAT 57.297 36.000 8.90 0.00 45.68 1.63
2378 2459 3.958147 ACCCAAACTAACCTTCCTGTTTG 59.042 43.478 9.59 9.59 44.90 2.93
2379 2460 4.259933 ACCCAAACTAACCTTCCTGTTT 57.740 40.909 0.00 0.00 33.56 2.83
2380 2461 3.965470 ACCCAAACTAACCTTCCTGTT 57.035 42.857 0.00 0.00 0.00 3.16
2381 2462 3.965470 AACCCAAACTAACCTTCCTGT 57.035 42.857 0.00 0.00 0.00 4.00
2382 2463 5.237236 TCTAACCCAAACTAACCTTCCTG 57.763 43.478 0.00 0.00 0.00 3.86
2383 2464 5.806734 GCATCTAACCCAAACTAACCTTCCT 60.807 44.000 0.00 0.00 0.00 3.36
2384 2465 4.398358 GCATCTAACCCAAACTAACCTTCC 59.602 45.833 0.00 0.00 0.00 3.46
2385 2466 5.007682 TGCATCTAACCCAAACTAACCTTC 58.992 41.667 0.00 0.00 0.00 3.46
2386 2467 4.993028 TGCATCTAACCCAAACTAACCTT 58.007 39.130 0.00 0.00 0.00 3.50
2387 2468 4.650972 TGCATCTAACCCAAACTAACCT 57.349 40.909 0.00 0.00 0.00 3.50
2388 2469 5.193679 AGATGCATCTAACCCAAACTAACC 58.806 41.667 27.73 0.00 34.85 2.85
2389 2470 7.859325 TTAGATGCATCTAACCCAAACTAAC 57.141 36.000 34.91 4.14 42.66 2.34
2400 2481 7.953005 TTTTGAATGGGTTAGATGCATCTAA 57.047 32.000 34.91 34.91 44.63 2.10
2401 2482 7.953005 TTTTTGAATGGGTTAGATGCATCTA 57.047 32.000 28.69 28.69 38.32 1.98
2402 2483 6.855763 TTTTTGAATGGGTTAGATGCATCT 57.144 33.333 30.85 30.85 40.86 2.90
2422 2503 9.100197 AGTACATCTTGGGTGGATTAAATTTTT 57.900 29.630 0.00 0.00 0.00 1.94
2423 2504 8.664669 AGTACATCTTGGGTGGATTAAATTTT 57.335 30.769 0.00 0.00 0.00 1.82
2424 2505 8.664669 AAGTACATCTTGGGTGGATTAAATTT 57.335 30.769 0.00 0.00 34.77 1.82
2425 2506 9.936329 ATAAGTACATCTTGGGTGGATTAAATT 57.064 29.630 0.00 0.00 37.56 1.82
2426 2507 9.936329 AATAAGTACATCTTGGGTGGATTAAAT 57.064 29.630 0.00 0.00 37.56 1.40
2427 2508 9.762381 AAATAAGTACATCTTGGGTGGATTAAA 57.238 29.630 0.00 0.00 37.56 1.52
2428 2509 9.184523 CAAATAAGTACATCTTGGGTGGATTAA 57.815 33.333 0.00 0.00 37.56 1.40
2429 2510 7.777910 CCAAATAAGTACATCTTGGGTGGATTA 59.222 37.037 0.00 0.00 37.56 1.75
2430 2511 6.607198 CCAAATAAGTACATCTTGGGTGGATT 59.393 38.462 0.00 0.00 37.56 3.01
2431 2512 6.129179 CCAAATAAGTACATCTTGGGTGGAT 58.871 40.000 0.00 0.00 37.56 3.41
2432 2513 5.505780 CCAAATAAGTACATCTTGGGTGGA 58.494 41.667 0.00 0.00 37.56 4.02
2433 2514 5.835113 CCAAATAAGTACATCTTGGGTGG 57.165 43.478 0.00 0.00 37.56 4.61
2437 2518 8.575649 AACTAACCCAAATAAGTACATCTTGG 57.424 34.615 0.00 2.54 37.56 3.61
2438 2519 9.449719 AGAACTAACCCAAATAAGTACATCTTG 57.550 33.333 0.00 0.00 37.56 3.02
2476 2557 8.739972 GGTCAAATAAATAGATGTGGTTGAGTT 58.260 33.333 0.00 0.00 0.00 3.01
2477 2558 7.888021 TGGTCAAATAAATAGATGTGGTTGAGT 59.112 33.333 0.00 0.00 0.00 3.41
2478 2559 8.279970 TGGTCAAATAAATAGATGTGGTTGAG 57.720 34.615 0.00 0.00 0.00 3.02
2479 2560 8.821686 ATGGTCAAATAAATAGATGTGGTTGA 57.178 30.769 0.00 0.00 0.00 3.18
2480 2561 8.137437 GGATGGTCAAATAAATAGATGTGGTTG 58.863 37.037 0.00 0.00 0.00 3.77
2481 2562 7.287696 GGGATGGTCAAATAAATAGATGTGGTT 59.712 37.037 0.00 0.00 0.00 3.67
2482 2563 6.777580 GGGATGGTCAAATAAATAGATGTGGT 59.222 38.462 0.00 0.00 0.00 4.16
2483 2564 7.006509 AGGGATGGTCAAATAAATAGATGTGG 58.993 38.462 0.00 0.00 0.00 4.17
2484 2565 8.355169 CAAGGGATGGTCAAATAAATAGATGTG 58.645 37.037 0.00 0.00 0.00 3.21
2485 2566 8.281531 TCAAGGGATGGTCAAATAAATAGATGT 58.718 33.333 0.00 0.00 0.00 3.06
2486 2567 8.696043 TCAAGGGATGGTCAAATAAATAGATG 57.304 34.615 0.00 0.00 0.00 2.90
2487 2568 9.359653 CTTCAAGGGATGGTCAAATAAATAGAT 57.640 33.333 0.00 0.00 0.00 1.98
2488 2569 7.779798 CCTTCAAGGGATGGTCAAATAAATAGA 59.220 37.037 0.00 0.00 34.46 1.98
2489 2570 7.945134 CCTTCAAGGGATGGTCAAATAAATAG 58.055 38.462 0.00 0.00 34.46 1.73
2490 2571 7.896383 CCTTCAAGGGATGGTCAAATAAATA 57.104 36.000 0.00 0.00 34.46 1.40
2491 2572 6.796785 CCTTCAAGGGATGGTCAAATAAAT 57.203 37.500 0.00 0.00 34.46 1.40
2506 2587 0.103208 CGGACGAGATCCCTTCAAGG 59.897 60.000 0.00 0.00 46.04 3.61
2507 2588 1.103803 TCGGACGAGATCCCTTCAAG 58.896 55.000 0.00 0.00 46.04 3.02
2508 2589 1.552578 TTCGGACGAGATCCCTTCAA 58.447 50.000 0.00 0.00 46.04 2.69
2509 2590 1.203994 GTTTCGGACGAGATCCCTTCA 59.796 52.381 0.00 0.00 46.04 3.02
2510 2591 1.203994 TGTTTCGGACGAGATCCCTTC 59.796 52.381 0.00 0.00 46.04 3.46
2511 2592 1.263356 TGTTTCGGACGAGATCCCTT 58.737 50.000 0.00 0.00 46.04 3.95
2512 2593 1.263356 TTGTTTCGGACGAGATCCCT 58.737 50.000 0.00 0.00 46.04 4.20
2513 2594 2.159085 AGATTGTTTCGGACGAGATCCC 60.159 50.000 0.00 0.00 46.04 3.85
2514 2595 2.860735 CAGATTGTTTCGGACGAGATCC 59.139 50.000 0.00 0.00 45.20 3.36
2515 2596 2.282820 GCAGATTGTTTCGGACGAGATC 59.717 50.000 0.00 0.00 0.00 2.75
2516 2597 2.271800 GCAGATTGTTTCGGACGAGAT 58.728 47.619 0.00 0.00 0.00 2.75
2517 2598 1.000394 TGCAGATTGTTTCGGACGAGA 60.000 47.619 0.00 0.00 0.00 4.04
2518 2599 1.428448 TGCAGATTGTTTCGGACGAG 58.572 50.000 0.00 0.00 0.00 4.18
2519 2600 1.872388 TTGCAGATTGTTTCGGACGA 58.128 45.000 0.00 0.00 0.00 4.20
2520 2601 2.679355 TTTGCAGATTGTTTCGGACG 57.321 45.000 0.00 0.00 0.00 4.79
2521 2602 6.640907 ACTTTATTTTGCAGATTGTTTCGGAC 59.359 34.615 0.00 0.00 0.00 4.79
2522 2603 6.744112 ACTTTATTTTGCAGATTGTTTCGGA 58.256 32.000 0.00 0.00 0.00 4.55
2523 2604 6.863126 AGACTTTATTTTGCAGATTGTTTCGG 59.137 34.615 0.00 0.00 0.00 4.30
2524 2605 7.858052 AGACTTTATTTTGCAGATTGTTTCG 57.142 32.000 0.00 0.00 0.00 3.46
2525 2606 9.346725 CCTAGACTTTATTTTGCAGATTGTTTC 57.653 33.333 0.00 0.00 0.00 2.78
2526 2607 8.306761 CCCTAGACTTTATTTTGCAGATTGTTT 58.693 33.333 0.00 0.00 0.00 2.83
2527 2608 7.451566 ACCCTAGACTTTATTTTGCAGATTGTT 59.548 33.333 0.00 0.00 0.00 2.83
2528 2609 6.948309 ACCCTAGACTTTATTTTGCAGATTGT 59.052 34.615 0.00 0.00 0.00 2.71
2529 2610 7.396540 ACCCTAGACTTTATTTTGCAGATTG 57.603 36.000 0.00 0.00 0.00 2.67
2530 2611 9.178758 CTAACCCTAGACTTTATTTTGCAGATT 57.821 33.333 0.00 0.00 0.00 2.40
2531 2612 8.329502 ACTAACCCTAGACTTTATTTTGCAGAT 58.670 33.333 0.00 0.00 0.00 2.90
2532 2613 7.686434 ACTAACCCTAGACTTTATTTTGCAGA 58.314 34.615 0.00 0.00 0.00 4.26
2533 2614 7.923414 ACTAACCCTAGACTTTATTTTGCAG 57.077 36.000 0.00 0.00 0.00 4.41
2534 2615 8.161425 AGAACTAACCCTAGACTTTATTTTGCA 58.839 33.333 0.00 0.00 0.00 4.08
2535 2616 8.563123 AGAACTAACCCTAGACTTTATTTTGC 57.437 34.615 0.00 0.00 0.00 3.68
2541 2622 9.774413 CTCAAAAAGAACTAACCCTAGACTTTA 57.226 33.333 0.00 0.00 35.95 1.85
2542 2623 8.491958 TCTCAAAAAGAACTAACCCTAGACTTT 58.508 33.333 0.00 0.00 37.14 2.66
2543 2624 7.932491 GTCTCAAAAAGAACTAACCCTAGACTT 59.068 37.037 0.00 0.00 35.21 3.01
2544 2625 7.443477 GTCTCAAAAAGAACTAACCCTAGACT 58.557 38.462 0.00 0.00 35.21 3.24
2545 2626 6.649973 GGTCTCAAAAAGAACTAACCCTAGAC 59.350 42.308 0.00 0.00 38.79 2.59
2546 2627 6.328148 TGGTCTCAAAAAGAACTAACCCTAGA 59.672 38.462 0.00 0.00 42.69 2.43
2547 2628 6.531021 TGGTCTCAAAAAGAACTAACCCTAG 58.469 40.000 0.00 0.00 42.69 3.02
2548 2629 6.503560 TGGTCTCAAAAAGAACTAACCCTA 57.496 37.500 0.00 0.00 42.69 3.53
2549 2630 5.382664 TGGTCTCAAAAAGAACTAACCCT 57.617 39.130 0.00 0.00 42.69 4.34
2550 2631 6.650427 AATGGTCTCAAAAAGAACTAACCC 57.350 37.500 0.00 0.00 42.69 4.11
2575 2656 9.920133 GGAAGAGCAAGAGAAAAAGATATTTTT 57.080 29.630 10.44 10.44 36.89 1.94
2576 2657 9.306777 AGGAAGAGCAAGAGAAAAAGATATTTT 57.693 29.630 0.00 0.00 0.00 1.82
2577 2658 8.738106 CAGGAAGAGCAAGAGAAAAAGATATTT 58.262 33.333 0.00 0.00 0.00 1.40
2578 2659 7.148103 GCAGGAAGAGCAAGAGAAAAAGATATT 60.148 37.037 0.00 0.00 0.00 1.28
2579 2660 6.318396 GCAGGAAGAGCAAGAGAAAAAGATAT 59.682 38.462 0.00 0.00 0.00 1.63
2580 2661 5.645497 GCAGGAAGAGCAAGAGAAAAAGATA 59.355 40.000 0.00 0.00 0.00 1.98
2581 2662 4.458642 GCAGGAAGAGCAAGAGAAAAAGAT 59.541 41.667 0.00 0.00 0.00 2.40
2582 2663 3.817647 GCAGGAAGAGCAAGAGAAAAAGA 59.182 43.478 0.00 0.00 0.00 2.52
2583 2664 3.567164 TGCAGGAAGAGCAAGAGAAAAAG 59.433 43.478 0.00 0.00 39.39 2.27
2584 2665 3.554934 TGCAGGAAGAGCAAGAGAAAAA 58.445 40.909 0.00 0.00 39.39 1.94
2585 2666 3.144506 CTGCAGGAAGAGCAAGAGAAAA 58.855 45.455 5.57 0.00 42.17 2.29
2586 2667 2.775890 CTGCAGGAAGAGCAAGAGAAA 58.224 47.619 5.57 0.00 42.17 2.52
2587 2668 1.610102 GCTGCAGGAAGAGCAAGAGAA 60.610 52.381 17.12 0.00 42.17 2.87
2588 2669 0.036577 GCTGCAGGAAGAGCAAGAGA 60.037 55.000 17.12 0.00 42.17 3.10
2589 2670 0.321387 TGCTGCAGGAAGAGCAAGAG 60.321 55.000 17.12 0.00 42.22 2.85
2590 2671 0.321387 CTGCTGCAGGAAGAGCAAGA 60.321 55.000 21.71 0.00 44.44 3.02
2591 2672 0.321387 TCTGCTGCAGGAAGAGCAAG 60.321 55.000 27.79 0.00 44.44 4.01
2592 2673 0.327259 ATCTGCTGCAGGAAGAGCAA 59.673 50.000 27.79 7.80 44.44 3.91
2593 2674 0.107800 GATCTGCTGCAGGAAGAGCA 60.108 55.000 27.79 8.55 42.94 4.26
2594 2675 0.814812 GGATCTGCTGCAGGAAGAGC 60.815 60.000 27.79 14.12 35.34 4.09
2595 2676 0.179051 GGGATCTGCTGCAGGAAGAG 60.179 60.000 27.79 0.56 32.20 2.85
2596 2677 0.619832 AGGGATCTGCTGCAGGAAGA 60.620 55.000 27.79 12.42 33.43 2.87
2597 2678 0.179051 GAGGGATCTGCTGCAGGAAG 60.179 60.000 27.79 7.09 31.51 3.46
2598 2679 1.630126 GGAGGGATCTGCTGCAGGAA 61.630 60.000 27.79 11.57 31.51 3.36
2599 2680 2.068821 GGAGGGATCTGCTGCAGGA 61.069 63.158 27.79 12.70 31.51 3.86
2600 2681 2.509916 GGAGGGATCTGCTGCAGG 59.490 66.667 27.79 10.85 31.51 4.85
2601 2682 2.509916 GGGAGGGATCTGCTGCAG 59.490 66.667 23.31 23.31 0.00 4.41
2602 2683 3.092511 GGGGAGGGATCTGCTGCA 61.093 66.667 0.88 0.88 0.00 4.41
2603 2684 3.092511 TGGGGAGGGATCTGCTGC 61.093 66.667 0.00 0.00 0.00 5.25
2604 2685 1.277580 AAGTGGGGAGGGATCTGCTG 61.278 60.000 0.00 0.00 0.00 4.41
2605 2686 0.985490 GAAGTGGGGAGGGATCTGCT 60.985 60.000 0.00 0.00 0.00 4.24
2606 2687 1.529309 GAAGTGGGGAGGGATCTGC 59.471 63.158 0.00 0.00 0.00 4.26
2607 2688 0.327000 AGGAAGTGGGGAGGGATCTG 60.327 60.000 0.00 0.00 0.00 2.90
2608 2689 0.030603 GAGGAAGTGGGGAGGGATCT 60.031 60.000 0.00 0.00 0.00 2.75
2609 2690 0.326618 TGAGGAAGTGGGGAGGGATC 60.327 60.000 0.00 0.00 0.00 3.36
2610 2691 0.621862 GTGAGGAAGTGGGGAGGGAT 60.622 60.000 0.00 0.00 0.00 3.85
2611 2692 1.229529 GTGAGGAAGTGGGGAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
2612 2693 1.538876 TGTGAGGAAGTGGGGAGGG 60.539 63.158 0.00 0.00 0.00 4.30
2613 2694 1.986413 CTGTGAGGAAGTGGGGAGG 59.014 63.158 0.00 0.00 0.00 4.30
2614 2695 1.197430 AGCTGTGAGGAAGTGGGGAG 61.197 60.000 0.00 0.00 0.00 4.30
2615 2696 0.768221 AAGCTGTGAGGAAGTGGGGA 60.768 55.000 0.00 0.00 0.00 4.81
2616 2697 0.322008 GAAGCTGTGAGGAAGTGGGG 60.322 60.000 0.00 0.00 0.00 4.96
2617 2698 0.689623 AGAAGCTGTGAGGAAGTGGG 59.310 55.000 0.00 0.00 0.00 4.61
2618 2699 2.149578 CAAGAAGCTGTGAGGAAGTGG 58.850 52.381 0.00 0.00 0.00 4.00
2619 2700 2.805099 GACAAGAAGCTGTGAGGAAGTG 59.195 50.000 0.00 0.00 0.00 3.16
2620 2701 2.224402 GGACAAGAAGCTGTGAGGAAGT 60.224 50.000 0.00 0.00 0.00 3.01
2621 2702 2.038295 AGGACAAGAAGCTGTGAGGAAG 59.962 50.000 0.00 0.00 0.00 3.46
2622 2703 2.037772 GAGGACAAGAAGCTGTGAGGAA 59.962 50.000 0.00 0.00 0.00 3.36
2623 2704 1.620819 GAGGACAAGAAGCTGTGAGGA 59.379 52.381 0.00 0.00 0.00 3.71
2624 2705 1.622811 AGAGGACAAGAAGCTGTGAGG 59.377 52.381 0.00 0.00 0.00 3.86
2625 2706 2.353605 GGAGAGGACAAGAAGCTGTGAG 60.354 54.545 0.00 0.00 0.00 3.51
2626 2707 1.620819 GGAGAGGACAAGAAGCTGTGA 59.379 52.381 0.00 0.00 0.00 3.58
2627 2708 1.338579 GGGAGAGGACAAGAAGCTGTG 60.339 57.143 0.00 0.00 0.00 3.66
2628 2709 0.980423 GGGAGAGGACAAGAAGCTGT 59.020 55.000 0.00 0.00 0.00 4.40
2629 2710 1.206849 GAGGGAGAGGACAAGAAGCTG 59.793 57.143 0.00 0.00 0.00 4.24
2630 2711 1.567357 GAGGGAGAGGACAAGAAGCT 58.433 55.000 0.00 0.00 0.00 3.74
2631 2712 0.539518 GGAGGGAGAGGACAAGAAGC 59.460 60.000 0.00 0.00 0.00 3.86
2632 2713 1.199615 GGGAGGGAGAGGACAAGAAG 58.800 60.000 0.00 0.00 0.00 2.85
2633 2714 0.793617 AGGGAGGGAGAGGACAAGAA 59.206 55.000 0.00 0.00 0.00 2.52
2634 2715 0.041833 CAGGGAGGGAGAGGACAAGA 59.958 60.000 0.00 0.00 0.00 3.02
2635 2716 1.621672 GCAGGGAGGGAGAGGACAAG 61.622 65.000 0.00 0.00 0.00 3.16
2636 2717 1.613630 GCAGGGAGGGAGAGGACAA 60.614 63.158 0.00 0.00 0.00 3.18
2637 2718 2.039624 GCAGGGAGGGAGAGGACA 59.960 66.667 0.00 0.00 0.00 4.02
2638 2719 2.766229 GGCAGGGAGGGAGAGGAC 60.766 72.222 0.00 0.00 0.00 3.85
2639 2720 2.955246 AGGCAGGGAGGGAGAGGA 60.955 66.667 0.00 0.00 0.00 3.71
2640 2721 2.445654 GAGGCAGGGAGGGAGAGG 60.446 72.222 0.00 0.00 0.00 3.69
2641 2722 1.457455 GAGAGGCAGGGAGGGAGAG 60.457 68.421 0.00 0.00 0.00 3.20
2642 2723 2.693017 GAGAGGCAGGGAGGGAGA 59.307 66.667 0.00 0.00 0.00 3.71
2643 2724 2.837291 CGAGAGGCAGGGAGGGAG 60.837 72.222 0.00 0.00 0.00 4.30
2669 2750 0.098376 ATACGGCGAGACGTCTTCAC 59.902 55.000 21.08 11.89 45.08 3.18
2670 2751 0.376152 GATACGGCGAGACGTCTTCA 59.624 55.000 21.08 2.00 45.08 3.02
2671 2752 0.316854 GGATACGGCGAGACGTCTTC 60.317 60.000 21.08 14.29 45.08 2.87
2672 2753 1.726265 GGATACGGCGAGACGTCTT 59.274 57.895 21.08 5.66 45.08 3.01
2673 2754 3.418714 GGATACGGCGAGACGTCT 58.581 61.111 20.18 20.18 45.08 4.18
2685 2766 1.669211 GGTTAGATGGAGCGCGGATAC 60.669 57.143 8.83 0.00 0.00 2.24
2686 2767 0.601558 GGTTAGATGGAGCGCGGATA 59.398 55.000 8.83 0.00 0.00 2.59
2687 2768 1.367840 GGTTAGATGGAGCGCGGAT 59.632 57.895 8.83 0.00 0.00 4.18
2688 2769 2.792947 GGGTTAGATGGAGCGCGGA 61.793 63.158 8.83 0.00 0.00 5.54
2689 2770 1.461091 TAGGGTTAGATGGAGCGCGG 61.461 60.000 8.83 0.00 0.00 6.46
2690 2771 0.318784 GTAGGGTTAGATGGAGCGCG 60.319 60.000 0.00 0.00 0.00 6.86
2691 2772 0.033642 GGTAGGGTTAGATGGAGCGC 59.966 60.000 0.00 0.00 0.00 5.92
2692 2773 1.410004 TGGTAGGGTTAGATGGAGCG 58.590 55.000 0.00 0.00 0.00 5.03
2693 2774 2.303311 GGATGGTAGGGTTAGATGGAGC 59.697 54.545 0.00 0.00 0.00 4.70
2694 2775 3.587498 TGGATGGTAGGGTTAGATGGAG 58.413 50.000 0.00 0.00 0.00 3.86
2695 2776 3.717507 TGGATGGTAGGGTTAGATGGA 57.282 47.619 0.00 0.00 0.00 3.41
2696 2777 4.080015 TGTTTGGATGGTAGGGTTAGATGG 60.080 45.833 0.00 0.00 0.00 3.51
2697 2778 4.881850 GTGTTTGGATGGTAGGGTTAGATG 59.118 45.833 0.00 0.00 0.00 2.90
2698 2779 4.079958 GGTGTTTGGATGGTAGGGTTAGAT 60.080 45.833 0.00 0.00 0.00 1.98
2699 2780 3.264964 GGTGTTTGGATGGTAGGGTTAGA 59.735 47.826 0.00 0.00 0.00 2.10
2700 2781 3.265995 AGGTGTTTGGATGGTAGGGTTAG 59.734 47.826 0.00 0.00 0.00 2.34
2701 2782 3.261962 AGGTGTTTGGATGGTAGGGTTA 58.738 45.455 0.00 0.00 0.00 2.85
2702 2783 2.041216 GAGGTGTTTGGATGGTAGGGTT 59.959 50.000 0.00 0.00 0.00 4.11
2703 2784 1.633945 GAGGTGTTTGGATGGTAGGGT 59.366 52.381 0.00 0.00 0.00 4.34
2704 2785 1.916181 AGAGGTGTTTGGATGGTAGGG 59.084 52.381 0.00 0.00 0.00 3.53
2705 2786 2.840651 AGAGAGGTGTTTGGATGGTAGG 59.159 50.000 0.00 0.00 0.00 3.18
2706 2787 4.442192 GCTAGAGAGGTGTTTGGATGGTAG 60.442 50.000 0.00 0.00 0.00 3.18
2707 2788 3.451178 GCTAGAGAGGTGTTTGGATGGTA 59.549 47.826 0.00 0.00 0.00 3.25
2708 2789 2.237392 GCTAGAGAGGTGTTTGGATGGT 59.763 50.000 0.00 0.00 0.00 3.55
2709 2790 2.503356 AGCTAGAGAGGTGTTTGGATGG 59.497 50.000 0.00 0.00 30.28 3.51
2710 2791 3.902881 AGCTAGAGAGGTGTTTGGATG 57.097 47.619 0.00 0.00 30.28 3.51
2711 2792 4.873010 TCTAGCTAGAGAGGTGTTTGGAT 58.127 43.478 19.72 0.00 34.50 3.41
2712 2793 4.317530 TCTAGCTAGAGAGGTGTTTGGA 57.682 45.455 19.72 0.00 34.50 3.53
2724 2805 8.327271 TCTAACCTTGAACTAACTCTAGCTAGA 58.673 37.037 22.01 22.01 0.00 2.43
2725 2806 8.508883 TCTAACCTTGAACTAACTCTAGCTAG 57.491 38.462 15.01 15.01 0.00 3.42
2726 2807 8.874744 TTCTAACCTTGAACTAACTCTAGCTA 57.125 34.615 0.00 0.00 0.00 3.32
2727 2808 7.778185 TTCTAACCTTGAACTAACTCTAGCT 57.222 36.000 0.00 0.00 0.00 3.32
2728 2809 8.471609 AGATTCTAACCTTGAACTAACTCTAGC 58.528 37.037 0.00 0.00 0.00 3.42
2740 2821 8.925338 GGGATTAGAGTTAGATTCTAACCTTGA 58.075 37.037 25.81 15.10 39.28 3.02
2741 2822 8.929487 AGGGATTAGAGTTAGATTCTAACCTTG 58.071 37.037 25.81 0.00 39.28 3.61
2761 2842 9.725206 TTGGATACTCTAACTTAGTTAGGGATT 57.275 33.333 31.57 20.18 46.24 3.01
2762 2843 9.725206 TTTGGATACTCTAACTTAGTTAGGGAT 57.275 33.333 31.57 22.14 46.24 3.85
2763 2844 8.975295 GTTTGGATACTCTAACTTAGTTAGGGA 58.025 37.037 31.57 19.15 46.24 4.20
2765 2846 9.804758 CTGTTTGGATACTCTAACTTAGTTAGG 57.195 37.037 26.03 19.83 43.79 2.69
2766 2847 9.804758 CCTGTTTGGATACTCTAACTTAGTTAG 57.195 37.037 22.24 22.24 41.36 2.34
2767 2848 8.755977 CCCTGTTTGGATACTCTAACTTAGTTA 58.244 37.037 4.66 4.66 38.35 2.24
2768 2849 7.621796 CCCTGTTTGGATACTCTAACTTAGTT 58.378 38.462 2.32 2.32 38.35 2.24
2769 2850 6.351966 GCCCTGTTTGGATACTCTAACTTAGT 60.352 42.308 0.00 0.00 38.35 2.24
2770 2851 6.049790 GCCCTGTTTGGATACTCTAACTTAG 58.950 44.000 0.00 0.00 38.35 2.18
2771 2852 5.104652 GGCCCTGTTTGGATACTCTAACTTA 60.105 44.000 0.00 0.00 38.35 2.24
2772 2853 4.324331 GGCCCTGTTTGGATACTCTAACTT 60.324 45.833 0.00 0.00 38.35 2.66
2773 2854 3.200165 GGCCCTGTTTGGATACTCTAACT 59.800 47.826 0.00 0.00 38.35 2.24
2774 2855 3.054655 TGGCCCTGTTTGGATACTCTAAC 60.055 47.826 0.00 0.00 38.35 2.34
2775 2856 3.186283 TGGCCCTGTTTGGATACTCTAA 58.814 45.455 0.00 0.00 38.35 2.10
2776 2857 2.840511 TGGCCCTGTTTGGATACTCTA 58.159 47.619 0.00 0.00 38.35 2.43
2777 2858 1.668826 TGGCCCTGTTTGGATACTCT 58.331 50.000 0.00 0.00 38.35 3.24
2778 2859 2.092429 TCATGGCCCTGTTTGGATACTC 60.092 50.000 7.98 0.00 38.35 2.59
2779 2860 1.922447 TCATGGCCCTGTTTGGATACT 59.078 47.619 7.98 0.00 38.35 2.12
2780 2861 2.427095 GTTCATGGCCCTGTTTGGATAC 59.573 50.000 7.98 0.00 38.35 2.24
2781 2862 2.311542 AGTTCATGGCCCTGTTTGGATA 59.688 45.455 7.98 0.00 38.35 2.59
2782 2863 1.077663 AGTTCATGGCCCTGTTTGGAT 59.922 47.619 7.98 0.00 38.35 3.41
2783 2864 0.482446 AGTTCATGGCCCTGTTTGGA 59.518 50.000 7.98 0.00 38.35 3.53
2784 2865 1.001181 CAAGTTCATGGCCCTGTTTGG 59.999 52.381 7.98 0.00 0.00 3.28
2785 2866 1.688197 ACAAGTTCATGGCCCTGTTTG 59.312 47.619 7.98 12.65 0.00 2.93
2786 2867 2.086610 ACAAGTTCATGGCCCTGTTT 57.913 45.000 7.98 0.00 0.00 2.83
2787 2868 1.963515 GAACAAGTTCATGGCCCTGTT 59.036 47.619 7.98 2.61 39.31 3.16
2788 2869 1.133513 TGAACAAGTTCATGGCCCTGT 60.134 47.619 11.34 0.00 43.90 4.00
2789 2870 1.619654 TGAACAAGTTCATGGCCCTG 58.380 50.000 11.34 0.00 43.90 4.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.