>input_sequence_68137
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---------------------------------------------------------------------------ATGGC
CAGCGTCATCGTCCTCGCTGCTGCTGCTGCTTGCTGCTGCATTCTCCTCGCGGCCTCGGTGTCGCCGGCGTCGGCGGCGC
CCGTGGTGTACAGCGTCGGCGACGAGAGGGGGTGGGCGGTGCCGGCCGGCAACGGCACCGAGACGTACAACCACTGGGCC
AAGAAGAACCGCTTCCAAGTCGGCGACGTCCTGGGTAAGCAGCAGTTACCGTCGCATCCAGATCGAACCC----------
--CATAGCGCTCTTCTTGATTACCGCAAAGCCTTATTGCTTGATTTATTTGGTACTCCTGTCCTACATAATAGTAACTCA
CTTTGCGTTCTTGATTCATGGCGGCCGGCCGGCGCGCAGATTTCAAGTACGCGGCCAAGGACTCGGTGCTGCTGGTGAAC
CACGACGACTACAAGATGTGCAGCACGGTGACCCCCCTGACCCGGTTCGCGGACGGCGACACCAGGTTCAAGTTCGACCG
GACGGGCTTCTTCTTCTTCGTCAGCGGCGTGCCGGGGCACTGCGAGGCGGGCCAGCGGATGATCGCCAGCGTCGTCGGGC
ACTCCACGCTGGCCGCCGCTCCGGCCAAACCGCCCGCCGTCGGCGTCGTC---GGCGGCCACGCGCCCGGCCCCAGCCCC
AGCCCCAACCA------GGCGGTCTCGGCCCCGGAGTCCCCGTCGTACGGGTCCAGTTCTGGCGGATCCACCTCGACGAC
CGGTTTCGGACCCAGCCCGTCGACCGAGCCCAGTGGCGCGTCCAGGCGGGCGCTCTCCACTGTCACAGGGCTTGTCGCCA
GTGTCGTCGCCATGATCGCGTTGGCGTGA---------------------------------------------------
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>chr6A_1_TraesCS6A01G287100
TAGCACTTCCAGTTCGCCAATTACAGCAACAAGGCCGGAGACTCTCCCCGTGCATACGAGCTAGTGTAAATCATCAAGAA
TCGCATAATCCCCTTTCAATTACCTTACTATAAATCTCTGATCATCAATGTTA------CTTAGTGTGAGCACAAAACAT
AGCGAGAAAGGCAAC---AAGGACAAGGGGAATTCACCTGCTGGGTGAGGCTGTGAATCTCGTTGGGCCGCATGAGGTCG
GCGAACTCGAGGTCGAGCACCACCTTCTGCCCACCCTCGGCGGCGCGCCGGAGCCTCTCGGCGCGCGCCCCCCGCTCCTC
CACGCGCTTTCCCACCCGCTCGAGCCGCGTCTCCCTGCGCGCCGCCAGCATCGCTTCGCGCGCCTCCTGCGACGGCGCCG
CGGTCAGAGACTCCTCCCACTCGCGCCTCCGCCGCTCTATGTCGGCGCGCCGGCGCTCCTTCTCCCCCGCCTTCCGCTCG
GCCTTCCGTGCCGCCTGCCGCTCCTGCTTCAGCAGCTTCTTCTTCGCGCTCTTGGAGAGCTGCGGAGGGTTCCCGTCCCC
CACGACCGCGGCCTGCCCGCTCTCCGCGCCGTCAGCCATCTCAACGCGCCGCC------------GCCGCCGAGGGAGTA
GTCCTGGGTTCGGAGAGGGGTTT-GGGGTTCTCCGCAGAATCTGGTGGAGTCTACGCAAACATGA-TATTTACCGTAAAC
CGACCCTCTTTGACGTACTTCGAGGAAATACGCCTCTCAAGGGGGTTTACGTATTCAACCCACGACTCGTCGCAGAAGCT
AACGCCTCCTATCGCCATGCAGCGGAGACCGGACAGCCCAACGGCT-CCTCCCGTTGTGCAGCAACGACCCCCGCTCTCT
CCTCCTGCACGTT-GGCAACTGACCTCCGTTTCGCCGGCGCCACTCGCTTCCGGATCCTCGGTATAAAAGGCCACTGCCA
CCATCGCTAGATCTCACACCAACACCACTACACTACACACTAGTGCCCTTTCTGATCCTTCT----------CCAATGGC
CAGCGTCATCGTCCTCGCTGCTGCTGCTGCTTGCTGCTGCATTCTCCTCGCGGCCTCGGTGTCGCCGGCGTCGGCGGCGC
CCGTGGTGTACAGCGTCGGCGACGAGAGGGGGTGGGCGGTGCCGGCCGGCAACGGCACCGAGACGTACAACCACTGGGCC
AAGAAGAACCGCTTCCAAGTCGGCGACGTCCTGGGTAAGCAGCAGTTACCGTCGCATCCAGATCGAACCC----------
--CATAGCGCTCTTCTTGATTACCGCAAAGCCTTATTGCTTGATTTATTTGGTACTCCTGTCCTACATAATAGTAACTCA
CTTTGCGTTCTTGATTCATGGCGGCCGGCCGGCGCGCAGATTTCAAGTACGCGGCCAAGGACTCGGTGCTGCTGGTGAAC
CACGACGACTACAAGATGTGCAGCACGGTGACCCCCCTGACCCGGTTCGCGGACGGCGACACCAGGTTCAAGTTCGACCG
GACGGGCTTCTTCTTCTTCGTCAGCGGCGTGCCGGGGCACTGCGAGGCGGGCCAGCGGATGATCGCCAGCGTCGTCGGGC
ACTCCACGCTGGCCGCCGCTCCGGCCAAACCGCCCGCCGTCGGCGTCGTC---GGCGGCCACGCGCCCGGCCCCAGCCCC
AGCCCCAACCA------GGCGGTCTCGGCCCCGGAGTCCCCGTCGTACGGGTCCAGTTCTGGCGGATCCACCTCGACGAC
CGGTTTCGGACCCAGCCCGTCGACCGAGCCCAGTGGCGCGTCCAGGCGGGCGCTCTCCACTGTCACAGGGCTTGTCGCCA
GTGTCGTCGCCATGATCGCGTTGGCGTGATCTTACTTGGAAGAGG----------TTAATGTAGGCTATCGATCGTTAGG
TCTGTGTCATCGGTGTAGGGATTAATGTTAGTCTCGAGATCTATAGGTAATGGTAGGGAGGAACATCTGTTCAAGTCAAA
AAAAAAAAGGGGAGGAACATCTGTTATCGAGTCTTAGGTGAATT-----ACTCAGGCGAGACCTTGGTGTCATGTAATCC
ATTCGATCCAGTCAAATAAAATGGAAATAAATTTCGCCTTATTGAT------TTGGTTTACTGTCGCCGTTTTCCTGTCG
ACCAGCAGCAGTCGGTAGGAGGTCTTCTCACGGTGCATTTTGCCAATCGAAAT--GGTCTCTGTCGAGCTAGTCACCCAT
AAATTCGGTGTGGTCAGACTGCTTCCAAGAAGTCAGAGTATTCCAGCATTTCCACTATTCTCGTGATGTTTCAGCCACCA
TCTTGTAGGGGTGGTAGTTGCTCTTAGAATGTTTTGTGTT-GTTATTTTGTTCCATGAGCCATCGATATGGGCCCTGTAT
GGATCCATGGGTTAGAGTTAATTTGTATTAGTTTGGACTCAACTAACTCAAAAATATCCAAACAGGAAGGTTAGTTTGGG
TTAGATGCATCTAACCCATTCAAAAAATTTAATCCACCCAAGATGTACTTATTTGGGTTAGTTCTTTTTTTTTTTAAACT
CAACCACATCTATTTATTTGACCATCCCTTGAAGGGATCTCGTCCGAAACAATCTGCAAAATAAAGTCTAGGGTTAGTTC
TTTTTGAGACCATTAAAAAATATCTTTTTCTCTTGCTCTTCCTGCAGCAGATCCCTCCCCACTTCCTCACAGCTTCTTGT
CCTCTCCCTCCCTGCCTCTCGCACTGCCCGTGAAGACGTCTCGCCGTATCCGCGCTCCATCTAACCCTACCATCCAAACA
CCTCTCTAGCTAGAGTTAGTTCAAGGTTAGAATCTAACTCTAATCCCTAACTAAGTTAGAGTATCCAAACAGGGCCATGA
ACTTGTTCATTCA
>chr6B_1
TAGCACTTCCAGTTCGCCAATTACAGCAACAAGGCCAGAGACTCTCCCCGTGCATACGAGCTAGTTTAAATCGTCAAGAA
TCGCATAATCCCCTTTCAATTACCTTACTATGAGTCTCTGATCATCAATGTTA------CTTACTGTGAGCACAAAACAT
AGCGAGGAAGGCAACAAGAAGGACAAGGGGAATTCACCTGCTGCGTGAGGCTGTGAATCTCGTTGGGCCGCATGAGGTCG
GCGAACTCGAGGTCGAGCACCACCTTCTGCCCACCCTCGGCGGCGCGCCGGAGCCTCTCGGCGCGCGCTCCCCGCTCCTC
CACGCGCTTTCCCACCCGCTCGAGCCGCGTCTCCCTGCGCGCCGCCAGCATCGCTTCGCGCGCCTCCTGCGACGGCGCCG
CGGCCAGAGACTCCTCCCACTCGCGCCTCCGCCGCTCTATGTCGGCGCGCCGGCGCTCCTTCTCCCCCGCCTTCCGCTCG
GCCTTCCGCGCCGCCTGCCGCTCCTGCTTCAGCAGCTTCTTCTTCGCGCTCTTAGACAGCTGAGGATGGTTGCCGTCTCC
CACGACCGCGGCCTGCTCGCTCTCCGTGCCGTCAGCCATCTCAACGCGCCGCCGCCGCCGCCGCCGCCGCCGAGGGAGTA
GTCCTGGGTTCGGAGAGGGGTTT-GGT-TTCTCCGTGGAATCTGGTGGAGGGTAGGCACAAATGAGTACTTACCGTAAAC
AGACGCTCGTTGACGTACTTTCAGAAACTACGCTTCCTAACGAGGCTTACGTATTCAATCCGCGACTCGTCGCAGAAGCG
AACGCCTCCTATCGCCATGCAGCGGAGACCGGACAGCCCAACGGCTTCCTCCCGTTGTGCAGCAACGACCCCCGCTCTCT
CCTCCTGCACGTTAGGCAACTGACCTCCGTTTCGCCGGCGCCACTCGCTCCCGGATCCTCGGTATAAAAGGCCACTGCCA
CCATCGGTAGATCTCACACCAACACCCCTACACTACACACCAGTGCCCTTACTGATCCTTCTCCAGTGCACGCCAATGGC
CAGCGTCGTCGTCCTCGCTGCTGCTGCT---TGCTGCTGCATTCTCCTAGCGGCCTCGGTGTCGCCGGCGTCGTCGGAGC
CCGCGGTGTACAGCGTCGGCGACGGGAGGGGGTGGGCGGTGCCGGCCGGCAACGGCACCGAGACGTACAACCACTGGGCC
AAGAAGAACCGCTTCCAAGTAGGCGACGTCCTGGGTA---AGCAGTTACCGTCGCATCCAGAATTCCAGATCCAATCCCA
TGCATAGCGCTCTTCTTGATTATCGCAAAGCGTGCATTCTTGGTTGATTAATTTGGTACACG-------------ACTCA
CTTCGCGTTCTTGATTCATGGCGGCCGGCCGGCGTGCAGATTTCAAGTACGCGGCCAAGGACTCGGTGCTGCTGGTGAAC
CACGACGACTACAAGATGTGCAGCACGGTGACCCCCCTGACCCGGTTCGCGGACGGCGACACCAAGTTCAAGTTCGACCG
GACGGGCTTCTTCTTCTTCGTCAGCGGCGTGCCGGGGCACTGCGAGGCGGGCCAGCGGATGATCGCCAGCGTCGCCGGGC
ACTCCACGCTGGCCGCCGCTCCGGCCAAACCGCCCTCCGTCGG---CGTC---GGCGGCCGCGCGCCCAGCCACAGCCCC
AGCCCCAGTCCCAGCAGGGCGGTCTCTGCCCCGGAGTCCCCGTCGTACGGGTCCAGTTCTGGCGGATCCACCCCGACGAC
CGGTTTCGGACCCAGCCCGTCGACCGAGCCCAGTGGCGCGTCCAGGCGGGCGCTCTCCATTGTCACGGGGCTTGTCGCCG
GTGTCGTCGCCATGATCGCGTTGGCGTGATCTTACTTAGAAGAGG----------TTACTGTAGGCTACCGATCGTTAGG
TCTGTGTCATCGGTGTAGGGATTAATGTCAGTCTTGAGATCTATAGGTAATGGTAGGGAGGAACATCG------------
----------------------GTTATGGAGTCTTAGGTGAATTACTCAACTCAGGCGAGACCTTGGTGTCATGTAATCC
ATTCGATCCAGTCAAATAAAATGGAAATAAACTTCGCCTTGTG------ATGTTCATTTACCGTCCCTGTGTTCCTGTCG
ATCAGCAGCAATCGGTAGGAGATCTTCTCACGGTGCATTTTGCCAATCGAAAT--GGT--ATGTCGAGCTAGTCGCCCAC
AAATTTGGTGTGGTT-GACTGCTTCCAAGAAGTCAGAGTATTCCAGCATTTCCACTATTATCGCGATGATTCAGCCACCA
TCTTGTAGGGGTGGTAGTTGCTCTTAGAATGTTTTGTGTTAGTTATTTTGCTCCATG-----------------------
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>chr6D_1
TAGCACTTCCAGTTCACCAATTACAGCAACAAGGCCAGATACTCTCCCCGTGCATACGAACTAGTTTAAATCATAAAGAA
TCGCATAATCCCCTTTCAATTGCATTACTATGAGTCTCTGATCATCAATGTTAGTACTACTTACGGTGAGCATAAAACAT
AGCGAGGAAGGCAACAAGAAGGACAAGGGGAATTCACCTGCTGCGTGAGGCTGTGAATCTCGTTGGGCCGCATGAGGTCC
GCGAACTCGAGGTCGAGCACCACCTTCTGCCCACCCTCGGCGGCGCGCCGGAGCCTCTCGGCGCGCGCGCCCCGCTCCTC
CACGCGCTTTCCCACCCGCTCGAGTCGCGTCTCCCTGCGCGCGGCCAGCATCGCCTCGCGCGCCTCCTGCGAGGGTGCCG
CGGCCAGAGACTCCTCCCACTCGCGCCTCCGCCGCTCTATGTCGGCGCGCCGGCGCTCCTTCTCCCCCGCCTTCCGCTCG
GCCTTCCGCGCCGCCTGCCGCTCCTGCTTCAGCAGCTTCTTCTTCGCGCTCTTAGACAACTGCGAAGGGTTCCCGTCCCC
CACGACCGCGGCCTGCTCGCTCTCCGTGCCGTCAGCCATCTCAACGCG---------------CCGCCGCCGAGGGAGCA
GTCCTGGGTTCGGAGAGGGGTTTGGGT-TTCTCCGTGGAATCTGGTGGAGGGTAGGCACAAATGAGTACTTACCGTAAAC
AGACGCTCGTTGACGTACTTTCAGTAAATACGTCTTCTAACGAGGCTAACGTATTCAACCCGCGACTCGTCGCAGAAGCT
AACGCCTCCTATCGCCATGCAGCGGAGACCGGACAGCCCAACGGC-TCCTCCCGTTGTGCAGCAACGACCCCCGCTCTCT
CCTCCTGCACGTTAGGCAACTGACCTCCGTTTCGCCGGCGCCACTCGCTGCCGGATCCTCGGTATAAAAGGCCACTGCCA
CCATCGGTAGATCTCACACCAACACCACTACACTACACACTAGTGCCCTTACTGATCCTTCTCCGGTGCACGCCAATGGC
CAGCGTCGTCGTCCTCGCTGCTGCTGCT---TGCTGCTGCATTCTCCTAGCGGCCTCGGTATCGCCGGCTTCGTCAGAGC
CCGCGGTGTACAGCGTCGGCGACGGGAGGGGGTGGACGGTGCCGGCCGGCAACGGCACCGAGACGTACAACCACTGGGCC
AAGAAGAACCGCTTCCAAGTCGGCGACGTCCTGGGTA---AGCAGTTACCGCCGCATCCAGATCGAACCC----------
--CATAACGCTCTTCTTGATCATTGCAAAGCATTCATTCCTGGTTGATTAGTTTGGTGCGCG-------------TCTCA
CTTTGACTTCTTGATTCATGGCGGCCGGCCGGCGTGCAGATTTCAAGTACGCGGCCAAGGACTCGGTGCTGCTGGTGAAC
CACGACGACTACAAGATGTGCAGCACGGTGACCCCCCTGACCCGGTTCGCGGACGGCGACACCAAGTTCAAGTTCGACCG
GACGGGCTTCTTCTTCTTCGTCAGCGGCGTGCCGGGACACTGCGAGGCGGGCCAGCGGATGATCGCCAGCGTCATCGGGC
ACTCCACGCTGGCCGCCGCTCCGGCCAAACCGCCCTCCGTCGG---CGTCGTCGGCGGCCACGCGCCCGGCCCCAGCCCC
AGCCCCAGCCG------GGCAGTCTCGGCCCCGGAGTCCCCGTCGTACGGGTCCAGTTCTGGCGGATCCACCTCGACGAC
CGGTTTCGGACCCAGCCCGTCGACCGAGCCCAGTGGCGCGTCCAGGCGGGCGCTCTCCACTGTCGTTGGGCTTGTCGCCG
GTGTCGTCGCCATGATCGCGTTGGCGTGATCTTACTTGGAACTTGGAAGAGGTTATTAATGTGGGCTATCGATCGTTAGG
TCTGTTTCATCGATGTAGGGTTTAATGTTAGTCTTGAGATCTATAGGTAATGGTAGAGAGGAACATCC------------
----------------------GTTATGGAGTCTTAGGTGAATTACTCA-----GGCGAGACCTTGGTGTCATGTAATCC
ATTCGATCCAGTCAAATAAAATGGA--TAAATTTCGCCTTGTGTTGTCGATGTTCGTTTACCATCGCCGTTTTCCTGTCG
ATCAGCAGCAATCGGTAGGAGGTCTTCTCACGGTGCATTTTGCCAATCGGTAGGAGGT--CTGTTGAGCTAGTTGCCCAC
AAATTCGGTGTGGTCT-ACTGCTTCCAAGAAGTCAGAGTATTCCAGCATTTCCACTATTCTCGTGATGA-----------
-CTTGTAGGGGTGGTAGTTGCTCTTAGAATGTTTTGTGTTAGTTATTTTGTTCCATG-----------------------
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>SNPs
------------------------------------S----------------------------S--------------
-------------------------------S-S-----------------------------S----------------
------S------------------------------------S------------------------------------
--------------------------------------------------------------------S-----------
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---S----------------------------------------------------------------------------
--------S--------------------------------------------S--S-----------------------
----------------S---------S-----------------------------------------------------
--------------------------SS-------SS-------------SS--S---S-S-------S-----------
S---S---S-----------SS--S-----------SS--S-S--S---------------S------------------
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-------------------------------------------------S------------------------------
------S-------------------------------------------S-----------------------------
-------S--------------------SSS-----------------S------------------------S---S--
---S--------------------S-------------------------------------------------------
-------------------------------------SSS----------------------------------------
----------------------S--------S--SS-S----S--S---S-S-SSSSSS-SSSSSSSSSSSSSSS-----
----------------------------------S---------------------------------------------
----------------------------------------------------------------S---------------
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-----------------------------------S-------SSS----------------------------------
-------S--S---------------------------------------------------------------------
------------------------------------------------------------------S------------S
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----------------------------------S--------------------------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-----S----------------------------------------------------
----------------------------------------S-SSSS--------S------S------------------
-S--------S-----------------------------------------------SS--------------S----S
---------------S----------------------------------------------------S-----------
---------------------------------------------------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_534
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----------------------------------GCTTCTTCTTCGCGCTCTTG--------------------------
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>reverse_1395
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----------------------------------CGCAGATTTCAAGTACGCGG--------------------------
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>forward_537
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-------------------------------------TCTTCTTCGCGCTCTTGGAG-----------------------
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>reverse_2220
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-----------------------------------------------------------TCTGTCGAGCTAGTCACCCA-
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