Multiple sequence alignment - TraesCS6A01G250900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G250900 chr6A 100.000 2895 0 0 1 2895 465230624 465233518 0.000000e+00 5347.0
1 TraesCS6A01G250900 chr6A 85.992 257 36 0 1293 1549 465389786 465390042 2.840000e-70 276.0
2 TraesCS6A01G250900 chr6D 91.445 2256 121 29 1 2235 326539098 326541302 0.000000e+00 3031.0
3 TraesCS6A01G250900 chr6D 94.813 347 14 3 2552 2895 11770935 11770590 3.280000e-149 538.0
4 TraesCS6A01G250900 chr6D 93.860 342 18 2 2554 2895 38190889 38190551 1.990000e-141 512.0
5 TraesCS6A01G250900 chr6D 91.545 343 27 2 2554 2895 29755203 29754862 3.380000e-129 472.0
6 TraesCS6A01G250900 chr6B 91.374 1681 89 24 417 2072 495807584 495805935 0.000000e+00 2250.0
7 TraesCS6A01G250900 chr6B 91.084 415 23 8 1 408 495808117 495807710 1.520000e-152 549.0
8 TraesCS6A01G250900 chr5A 95.627 343 13 2 2554 2895 560612123 560612464 1.520000e-152 549.0
9 TraesCS6A01G250900 chr5A 94.169 343 16 3 2554 2895 293507932 293507593 1.190000e-143 520.0
10 TraesCS6A01G250900 chr5A 100.000 35 0 0 2071 2105 290393163 290393197 6.700000e-07 65.8
11 TraesCS6A01G250900 chr4A 95.322 342 15 1 2554 2895 594001930 594001590 2.540000e-150 542.0
12 TraesCS6A01G250900 chr4A 94.444 342 16 3 2554 2895 620980754 620981092 9.190000e-145 523.0
13 TraesCS6A01G250900 chr4A 97.436 39 1 0 2071 2109 575026714 575026752 1.860000e-07 67.6
14 TraesCS6A01G250900 chr7A 93.878 343 17 4 2554 2895 90456879 90456540 5.530000e-142 514.0
15 TraesCS6A01G250900 chr7A 100.000 36 0 0 2071 2106 475966726 475966761 1.860000e-07 67.6
16 TraesCS6A01G250900 chr1D 92.593 351 19 6 2546 2895 98843790 98844134 5.570000e-137 497.0
17 TraesCS6A01G250900 chr1D 85.393 267 33 4 1289 1551 309088092 309088356 3.680000e-69 272.0
18 TraesCS6A01G250900 chr2D 89.961 259 26 0 1294 1552 527293783 527293525 4.620000e-88 335.0
19 TraesCS6A01G250900 chr2B 89.575 259 27 0 1294 1552 624355484 624355226 2.150000e-86 329.0
20 TraesCS6A01G250900 chr2B 97.436 39 1 0 2071 2109 187160278 187160316 1.860000e-07 67.6
21 TraesCS6A01G250900 chr2A 89.575 259 27 0 1294 1552 672292457 672292199 2.150000e-86 329.0
22 TraesCS6A01G250900 chr2A 100.000 33 0 0 2070 2102 28133163 28133195 8.660000e-06 62.1
23 TraesCS6A01G250900 chr1B 86.142 267 31 4 1289 1551 418821467 418821731 1.700000e-72 283.0
24 TraesCS6A01G250900 chr1A 85.393 267 33 4 1289 1551 388849400 388849664 3.680000e-69 272.0
25 TraesCS6A01G250900 chr3A 100.000 37 0 0 2073 2109 679923305 679923341 5.180000e-08 69.4
26 TraesCS6A01G250900 chr5B 84.722 72 3 7 2044 2108 550912948 550913018 6.700000e-07 65.8
27 TraesCS6A01G250900 chr3D 97.368 38 1 0 2076 2113 13143761 13143724 6.700000e-07 65.8
28 TraesCS6A01G250900 chr7D 93.023 43 3 0 2064 2106 393116354 393116396 2.410000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G250900 chr6A 465230624 465233518 2894 False 5347.0 5347 100.000 1 2895 1 chr6A.!!$F1 2894
1 TraesCS6A01G250900 chr6D 326539098 326541302 2204 False 3031.0 3031 91.445 1 2235 1 chr6D.!!$F1 2234
2 TraesCS6A01G250900 chr6B 495805935 495808117 2182 True 1399.5 2250 91.229 1 2072 2 chr6B.!!$R1 2071

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
101 102 0.463654 ATTGGTCGTGTGTGTGCTGT 60.464 50.0 0.00 0.0 0.0 4.40 F
747 895 1.017177 GCATTTGGACGGTCGCTGTA 61.017 55.0 1.43 0.0 0.0 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1121 1275 0.179029 ACCCTTGGAAACGTCCTGTG 60.179 55.0 0.0 0.0 45.22 3.66 R
2490 2658 0.034756 CCGTGGTGGTCATCTCAACA 59.965 55.0 0.0 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 3.003689 CCAGCAGTATTATTTTGGAGCCG 59.996 47.826 0.00 0.00 0.00 5.52
101 102 0.463654 ATTGGTCGTGTGTGTGCTGT 60.464 50.000 0.00 0.00 0.00 4.40
121 122 4.880759 TGTTGCATTTTCCATGACGAAAT 58.119 34.783 0.00 0.00 32.00 2.17
126 127 5.105837 TGCATTTTCCATGACGAAATCATCA 60.106 36.000 0.00 0.00 45.52 3.07
129 130 7.811236 GCATTTTCCATGACGAAATCATCATAT 59.189 33.333 0.00 0.00 45.52 1.78
132 133 7.601073 TTCCATGACGAAATCATCATATAGC 57.399 36.000 0.00 0.00 45.52 2.97
133 134 6.700352 TCCATGACGAAATCATCATATAGCA 58.300 36.000 0.00 0.00 45.52 3.49
134 135 7.333323 TCCATGACGAAATCATCATATAGCAT 58.667 34.615 0.00 0.00 45.52 3.79
136 137 9.101655 CCATGACGAAATCATCATATAGCATTA 57.898 33.333 0.00 0.00 45.52 1.90
172 179 1.584380 CTGCTCAGCAACTTGAGGCC 61.584 60.000 0.00 0.00 43.80 5.19
203 210 4.860022 TGTATCAGATCTGTCAGTCAGGA 58.140 43.478 21.92 0.00 43.76 3.86
298 306 3.692791 AAGCGAAGACTTTGTGGAAAC 57.307 42.857 4.35 0.00 0.00 2.78
332 344 2.669569 CACCACCGTTCCTGGCTG 60.670 66.667 0.00 0.00 31.13 4.85
350 362 1.600916 GTTGCTTCCGGGTCTTGCT 60.601 57.895 0.00 0.00 0.00 3.91
351 363 1.302511 TTGCTTCCGGGTCTTGCTC 60.303 57.895 0.00 0.00 0.00 4.26
352 364 2.050836 TTGCTTCCGGGTCTTGCTCA 62.051 55.000 0.00 0.00 0.00 4.26
353 365 2.035442 GCTTCCGGGTCTTGCTCAC 61.035 63.158 0.00 0.00 0.00 3.51
354 366 1.376037 CTTCCGGGTCTTGCTCACC 60.376 63.158 0.00 0.00 0.00 4.02
355 367 2.111999 CTTCCGGGTCTTGCTCACCA 62.112 60.000 0.00 0.00 35.35 4.17
356 368 2.046892 CCGGGTCTTGCTCACCAG 60.047 66.667 0.00 0.00 35.35 4.00
474 603 1.607251 CGGAACAGTAACCACCACCTC 60.607 57.143 0.00 0.00 0.00 3.85
495 624 1.477558 CCTGCAGGAAGGTGTTGAACT 60.478 52.381 29.88 0.00 37.39 3.01
581 711 1.399089 GTGTAGTCCTCGTCTCTGAGC 59.601 57.143 0.00 0.00 34.56 4.26
583 713 1.399089 GTAGTCCTCGTCTCTGAGCAC 59.601 57.143 0.00 0.00 34.56 4.40
596 726 3.293901 GAGCACGACAGCTGCCTCT 62.294 63.158 15.27 3.87 46.75 3.69
622 752 3.550992 CGCGTGGCCGTGTGTATC 61.551 66.667 0.00 0.00 39.68 2.24
688 818 1.102978 GTTTGGCCGGACTGCATATT 58.897 50.000 9.82 0.00 0.00 1.28
689 819 2.294074 GTTTGGCCGGACTGCATATTA 58.706 47.619 9.82 0.00 0.00 0.98
690 820 2.884639 GTTTGGCCGGACTGCATATTAT 59.115 45.455 9.82 0.00 0.00 1.28
723 853 1.707427 ACTGGAGTTCTGAATTGGCCT 59.293 47.619 3.32 0.00 0.00 5.19
747 895 1.017177 GCATTTGGACGGTCGCTGTA 61.017 55.000 1.43 0.00 0.00 2.74
769 917 8.400184 TGTATGGTTATGTCTACTATAGCGTT 57.600 34.615 0.00 0.00 0.00 4.84
770 918 9.506018 TGTATGGTTATGTCTACTATAGCGTTA 57.494 33.333 0.00 0.00 0.00 3.18
845 993 2.941013 GCTGCAGAATTTCGCGCG 60.941 61.111 26.76 26.76 0.00 6.86
876 1024 3.604875 TTCCGGAGATCCTAACAACAC 57.395 47.619 3.34 0.00 0.00 3.32
912 1060 2.192664 TTTTTAGCTCCGCATGGTGA 57.807 45.000 0.00 0.00 36.30 4.02
932 1080 7.608153 TGGTGACGATATCTTTTGTTTAGAGA 58.392 34.615 0.34 0.00 0.00 3.10
958 1106 6.937436 AAATAAAACGTAGGCCTCCATAAG 57.063 37.500 9.68 0.00 0.00 1.73
959 1107 5.881923 ATAAAACGTAGGCCTCCATAAGA 57.118 39.130 9.68 0.00 0.00 2.10
1034 1188 2.165437 GTCTGGTGCTTGTAGAGAGGAG 59.835 54.545 0.00 0.00 0.00 3.69
1095 1249 2.512056 CTCCTCTTCCTCCTCCTACTCA 59.488 54.545 0.00 0.00 0.00 3.41
1121 1275 2.410469 GGCTGTCATCAATGGCGC 59.590 61.111 0.00 0.00 34.48 6.53
1131 1285 2.281484 AATGGCGCACAGGACGTT 60.281 55.556 10.83 0.00 0.00 3.99
1138 1292 1.841663 CGCACAGGACGTTTCCAAGG 61.842 60.000 0.00 0.00 45.72 3.61
1755 1909 4.883300 GAGTACGACGGCGGCGAG 62.883 72.222 43.97 30.05 43.17 5.03
1807 1961 3.775654 AGTGCTGGACCTAGCCGC 61.776 66.667 11.80 6.51 43.02 6.53
1894 2048 8.138712 ACACTAGCGTTTCATTTTTCCAATTAA 58.861 29.630 0.00 0.00 0.00 1.40
1988 2142 2.696255 CGTTTTGTTCACGGTGTGTAC 58.304 47.619 8.17 6.02 35.05 2.90
2009 2163 6.537301 TGTACTGTATCCCGAAATGTGAAATC 59.463 38.462 0.00 0.00 0.00 2.17
2012 2166 5.257262 TGTATCCCGAAATGTGAAATCCAA 58.743 37.500 0.00 0.00 0.00 3.53
2016 2170 3.258123 CCCGAAATGTGAAATCCAAACCT 59.742 43.478 0.00 0.00 0.00 3.50
2069 2223 7.019656 ACGAAATACCCCCTCTAAACTTTTA 57.980 36.000 0.00 0.00 0.00 1.52
2074 2228 9.916360 AAATACCCCCTCTAAACTTTTATAGTG 57.084 33.333 0.00 0.00 37.12 2.74
2075 2229 8.865244 ATACCCCCTCTAAACTTTTATAGTGA 57.135 34.615 0.00 0.00 37.12 3.41
2076 2230 6.955364 ACCCCCTCTAAACTTTTATAGTGAC 58.045 40.000 0.00 0.00 37.12 3.67
2077 2231 6.069789 ACCCCCTCTAAACTTTTATAGTGACC 60.070 42.308 0.00 0.00 37.12 4.02
2079 2233 7.346436 CCCCCTCTAAACTTTTATAGTGACCTA 59.654 40.741 0.00 0.00 37.12 3.08
2108 2262 9.892130 ACATCTTATAAAAGTTTACAGAGGGAG 57.108 33.333 9.55 0.00 34.13 4.30
2109 2263 8.831550 CATCTTATAAAAGTTTACAGAGGGAGC 58.168 37.037 0.00 0.00 34.13 4.70
2118 2272 4.737855 TTACAGAGGGAGCACAATCTAC 57.262 45.455 0.00 0.00 0.00 2.59
2119 2273 2.826488 ACAGAGGGAGCACAATCTACT 58.174 47.619 0.00 0.00 0.00 2.57
2122 2276 2.769095 AGAGGGAGCACAATCTACTTCC 59.231 50.000 0.00 0.00 0.00 3.46
2130 2284 3.735514 GCACAATCTACTTCCTCGGTCTC 60.736 52.174 0.00 0.00 0.00 3.36
2134 2288 2.630158 TCTACTTCCTCGGTCTCGAAG 58.370 52.381 0.00 0.00 45.47 3.79
2150 2304 3.822996 TCGAAGTCTCAAACACTCGATC 58.177 45.455 0.00 0.00 38.68 3.69
2154 2308 5.800438 CGAAGTCTCAAACACTCGATCAATA 59.200 40.000 0.00 0.00 37.56 1.90
2158 2319 9.653287 AAGTCTCAAACACTCGATCAATAATAA 57.347 29.630 0.00 0.00 0.00 1.40
2191 2352 8.877864 ATGTTCAAGAAAGGTATATTTCCACA 57.122 30.769 0.00 0.00 39.53 4.17
2192 2353 8.106247 TGTTCAAGAAAGGTATATTTCCACAC 57.894 34.615 0.00 0.00 39.53 3.82
2194 2355 7.921786 TCAAGAAAGGTATATTTCCACACTG 57.078 36.000 0.00 0.00 39.53 3.66
2195 2356 7.458397 TCAAGAAAGGTATATTTCCACACTGT 58.542 34.615 0.00 0.00 39.53 3.55
2235 2403 4.468095 AACAACTGAACTACACATTCGC 57.532 40.909 0.00 0.00 0.00 4.70
2236 2404 2.806244 ACAACTGAACTACACATTCGCC 59.194 45.455 0.00 0.00 0.00 5.54
2237 2405 2.805671 CAACTGAACTACACATTCGCCA 59.194 45.455 0.00 0.00 0.00 5.69
2238 2406 2.688507 ACTGAACTACACATTCGCCAG 58.311 47.619 0.00 0.00 0.00 4.85
2239 2407 1.394917 CTGAACTACACATTCGCCAGC 59.605 52.381 0.00 0.00 0.00 4.85
2240 2408 1.270571 TGAACTACACATTCGCCAGCA 60.271 47.619 0.00 0.00 0.00 4.41
2241 2409 1.128692 GAACTACACATTCGCCAGCAC 59.871 52.381 0.00 0.00 0.00 4.40
2242 2410 0.034756 ACTACACATTCGCCAGCACA 59.965 50.000 0.00 0.00 0.00 4.57
2243 2411 1.155889 CTACACATTCGCCAGCACAA 58.844 50.000 0.00 0.00 0.00 3.33
2244 2412 1.739466 CTACACATTCGCCAGCACAAT 59.261 47.619 0.00 0.00 0.00 2.71
2245 2413 0.523072 ACACATTCGCCAGCACAATC 59.477 50.000 0.00 0.00 0.00 2.67
2246 2414 0.522626 CACATTCGCCAGCACAATCA 59.477 50.000 0.00 0.00 0.00 2.57
2247 2415 0.523072 ACATTCGCCAGCACAATCAC 59.477 50.000 0.00 0.00 0.00 3.06
2248 2416 0.179156 CATTCGCCAGCACAATCACC 60.179 55.000 0.00 0.00 0.00 4.02
2249 2417 0.322816 ATTCGCCAGCACAATCACCT 60.323 50.000 0.00 0.00 0.00 4.00
2250 2418 0.323302 TTCGCCAGCACAATCACCTA 59.677 50.000 0.00 0.00 0.00 3.08
2251 2419 0.541392 TCGCCAGCACAATCACCTAT 59.459 50.000 0.00 0.00 0.00 2.57
2252 2420 0.940126 CGCCAGCACAATCACCTATC 59.060 55.000 0.00 0.00 0.00 2.08
2253 2421 1.743431 CGCCAGCACAATCACCTATCA 60.743 52.381 0.00 0.00 0.00 2.15
2254 2422 2.368439 GCCAGCACAATCACCTATCAA 58.632 47.619 0.00 0.00 0.00 2.57
2255 2423 2.954318 GCCAGCACAATCACCTATCAAT 59.046 45.455 0.00 0.00 0.00 2.57
2256 2424 3.382546 GCCAGCACAATCACCTATCAATT 59.617 43.478 0.00 0.00 0.00 2.32
2257 2425 4.498682 GCCAGCACAATCACCTATCAATTC 60.499 45.833 0.00 0.00 0.00 2.17
2258 2426 4.260907 CCAGCACAATCACCTATCAATTCG 60.261 45.833 0.00 0.00 0.00 3.34
2259 2427 4.571984 CAGCACAATCACCTATCAATTCGA 59.428 41.667 0.00 0.00 0.00 3.71
2260 2428 4.813161 AGCACAATCACCTATCAATTCGAG 59.187 41.667 0.00 0.00 0.00 4.04
2261 2429 4.024556 GCACAATCACCTATCAATTCGAGG 60.025 45.833 0.00 0.00 36.36 4.63
2262 2430 5.118990 CACAATCACCTATCAATTCGAGGT 58.881 41.667 0.00 0.00 44.65 3.85
2263 2431 5.586243 CACAATCACCTATCAATTCGAGGTT 59.414 40.000 0.56 0.00 41.80 3.50
2264 2432 6.761242 CACAATCACCTATCAATTCGAGGTTA 59.239 38.462 0.56 0.00 41.80 2.85
2265 2433 6.761714 ACAATCACCTATCAATTCGAGGTTAC 59.238 38.462 0.56 0.00 41.80 2.50
2266 2434 4.928601 TCACCTATCAATTCGAGGTTACG 58.071 43.478 0.56 0.00 41.80 3.18
2267 2435 4.641541 TCACCTATCAATTCGAGGTTACGA 59.358 41.667 0.00 0.00 41.80 3.43
2274 2442 2.806608 TTCGAGGTTACGAAAGCAGT 57.193 45.000 0.00 0.00 46.66 4.40
2275 2443 2.060326 TCGAGGTTACGAAAGCAGTG 57.940 50.000 0.00 0.00 39.34 3.66
2276 2444 1.610038 TCGAGGTTACGAAAGCAGTGA 59.390 47.619 0.00 0.00 39.34 3.41
2277 2445 2.034939 TCGAGGTTACGAAAGCAGTGAA 59.965 45.455 0.00 0.00 39.34 3.18
2278 2446 2.408704 CGAGGTTACGAAAGCAGTGAAG 59.591 50.000 0.00 0.00 35.49 3.02
2279 2447 2.143925 AGGTTACGAAAGCAGTGAAGC 58.856 47.619 0.00 0.00 35.49 3.86
2280 2448 1.197036 GGTTACGAAAGCAGTGAAGCC 59.803 52.381 0.00 0.00 33.20 4.35
2281 2449 1.197036 GTTACGAAAGCAGTGAAGCCC 59.803 52.381 0.00 0.00 34.23 5.19
2282 2450 0.321298 TACGAAAGCAGTGAAGCCCC 60.321 55.000 0.00 0.00 34.23 5.80
2283 2451 2.335712 CGAAAGCAGTGAAGCCCCC 61.336 63.158 0.00 0.00 34.23 5.40
2284 2452 1.075659 GAAAGCAGTGAAGCCCCCT 59.924 57.895 0.00 0.00 34.23 4.79
2285 2453 0.962855 GAAAGCAGTGAAGCCCCCTC 60.963 60.000 0.00 0.00 34.23 4.30
2286 2454 1.430369 AAAGCAGTGAAGCCCCCTCT 61.430 55.000 0.00 0.00 34.23 3.69
2287 2455 1.846712 AAGCAGTGAAGCCCCCTCTC 61.847 60.000 0.00 0.00 34.23 3.20
2288 2456 2.596851 GCAGTGAAGCCCCCTCTCA 61.597 63.158 0.00 0.00 0.00 3.27
2289 2457 1.919600 GCAGTGAAGCCCCCTCTCAT 61.920 60.000 0.00 0.00 0.00 2.90
2290 2458 0.622665 CAGTGAAGCCCCCTCTCATT 59.377 55.000 0.00 0.00 0.00 2.57
2291 2459 0.622665 AGTGAAGCCCCCTCTCATTG 59.377 55.000 0.00 0.00 0.00 2.82
2292 2460 0.620556 GTGAAGCCCCCTCTCATTGA 59.379 55.000 0.00 0.00 0.00 2.57
2293 2461 0.914644 TGAAGCCCCCTCTCATTGAG 59.085 55.000 7.38 7.38 42.30 3.02
2294 2462 1.207791 GAAGCCCCCTCTCATTGAGA 58.792 55.000 15.39 15.39 45.39 3.27
2304 2472 3.920231 TCTCATTGAGAGGGTTGGATG 57.080 47.619 12.38 0.00 44.81 3.51
2305 2473 3.184628 TCTCATTGAGAGGGTTGGATGT 58.815 45.455 12.38 0.00 44.81 3.06
2306 2474 3.198635 TCTCATTGAGAGGGTTGGATGTC 59.801 47.826 12.38 0.00 44.81 3.06
2307 2475 2.093500 TCATTGAGAGGGTTGGATGTCG 60.093 50.000 0.00 0.00 0.00 4.35
2308 2476 1.639722 TTGAGAGGGTTGGATGTCGA 58.360 50.000 0.00 0.00 0.00 4.20
2309 2477 1.186200 TGAGAGGGTTGGATGTCGAG 58.814 55.000 0.00 0.00 0.00 4.04
2310 2478 0.179097 GAGAGGGTTGGATGTCGAGC 60.179 60.000 0.00 0.00 0.00 5.03
2311 2479 0.904865 AGAGGGTTGGATGTCGAGCA 60.905 55.000 0.00 0.00 0.00 4.26
2312 2480 0.460987 GAGGGTTGGATGTCGAGCAG 60.461 60.000 0.00 0.00 0.00 4.24
2313 2481 1.194781 AGGGTTGGATGTCGAGCAGT 61.195 55.000 0.00 0.00 0.00 4.40
2314 2482 1.021390 GGGTTGGATGTCGAGCAGTG 61.021 60.000 0.00 0.00 0.00 3.66
2315 2483 1.021390 GGTTGGATGTCGAGCAGTGG 61.021 60.000 0.00 0.00 0.00 4.00
2316 2484 1.375908 TTGGATGTCGAGCAGTGGC 60.376 57.895 0.00 0.00 41.61 5.01
2317 2485 2.512515 GGATGTCGAGCAGTGGCC 60.513 66.667 0.00 0.00 42.56 5.36
2318 2486 2.512515 GATGTCGAGCAGTGGCCC 60.513 66.667 0.00 0.00 42.56 5.80
2319 2487 3.005539 ATGTCGAGCAGTGGCCCT 61.006 61.111 0.00 0.00 42.56 5.19
2320 2488 3.320879 ATGTCGAGCAGTGGCCCTG 62.321 63.158 14.87 14.87 44.53 4.45
2321 2489 4.767255 GTCGAGCAGTGGCCCTGG 62.767 72.222 19.15 3.33 41.81 4.45
2324 2492 3.971702 GAGCAGTGGCCCTGGGTT 61.972 66.667 15.56 0.00 41.81 4.11
2325 2493 4.290622 AGCAGTGGCCCTGGGTTG 62.291 66.667 15.56 9.17 41.81 3.77
2327 2495 3.902112 CAGTGGCCCTGGGTTGGT 61.902 66.667 15.56 0.00 37.54 3.67
2328 2496 3.902112 AGTGGCCCTGGGTTGGTG 61.902 66.667 15.56 0.00 0.00 4.17
2329 2497 3.897122 GTGGCCCTGGGTTGGTGA 61.897 66.667 15.56 0.00 0.00 4.02
2330 2498 2.863484 TGGCCCTGGGTTGGTGAT 60.863 61.111 15.56 0.00 0.00 3.06
2331 2499 2.362889 GGCCCTGGGTTGGTGATG 60.363 66.667 15.56 0.00 0.00 3.07
2332 2500 2.440599 GCCCTGGGTTGGTGATGT 59.559 61.111 15.56 0.00 0.00 3.06
2333 2501 1.228862 GCCCTGGGTTGGTGATGTT 60.229 57.895 15.56 0.00 0.00 2.71
2334 2502 0.831711 GCCCTGGGTTGGTGATGTTT 60.832 55.000 15.56 0.00 0.00 2.83
2335 2503 1.715785 CCCTGGGTTGGTGATGTTTT 58.284 50.000 3.97 0.00 0.00 2.43
2336 2504 1.344114 CCCTGGGTTGGTGATGTTTTG 59.656 52.381 3.97 0.00 0.00 2.44
2337 2505 2.038659 CCTGGGTTGGTGATGTTTTGT 58.961 47.619 0.00 0.00 0.00 2.83
2338 2506 2.224018 CCTGGGTTGGTGATGTTTTGTG 60.224 50.000 0.00 0.00 0.00 3.33
2339 2507 2.430332 CTGGGTTGGTGATGTTTTGTGT 59.570 45.455 0.00 0.00 0.00 3.72
2340 2508 2.167281 TGGGTTGGTGATGTTTTGTGTG 59.833 45.455 0.00 0.00 0.00 3.82
2341 2509 2.428890 GGGTTGGTGATGTTTTGTGTGA 59.571 45.455 0.00 0.00 0.00 3.58
2342 2510 3.443976 GGTTGGTGATGTTTTGTGTGAC 58.556 45.455 0.00 0.00 0.00 3.67
2343 2511 3.105203 GTTGGTGATGTTTTGTGTGACG 58.895 45.455 0.00 0.00 0.00 4.35
2344 2512 2.633488 TGGTGATGTTTTGTGTGACGA 58.367 42.857 0.00 0.00 0.00 4.20
2345 2513 2.611751 TGGTGATGTTTTGTGTGACGAG 59.388 45.455 0.00 0.00 0.00 4.18
2346 2514 2.032030 GGTGATGTTTTGTGTGACGAGG 60.032 50.000 0.00 0.00 0.00 4.63
2347 2515 1.601903 TGATGTTTTGTGTGACGAGGC 59.398 47.619 0.00 0.00 0.00 4.70
2348 2516 0.586319 ATGTTTTGTGTGACGAGGCG 59.414 50.000 0.00 0.00 0.00 5.52
2349 2517 1.278637 GTTTTGTGTGACGAGGCGG 59.721 57.895 0.00 0.00 0.00 6.13
2350 2518 2.539338 TTTTGTGTGACGAGGCGGC 61.539 57.895 0.00 0.00 34.27 6.53
2387 2555 3.104843 GCAGGTAGCAACTCTATGAGG 57.895 52.381 0.00 0.00 44.79 3.86
2388 2556 2.804933 GCAGGTAGCAACTCTATGAGGC 60.805 54.545 0.00 0.00 44.79 4.70
2389 2557 2.043227 AGGTAGCAACTCTATGAGGCC 58.957 52.381 0.00 0.00 33.35 5.19
2390 2558 1.269831 GGTAGCAACTCTATGAGGCCG 60.270 57.143 0.00 0.00 33.35 6.13
2391 2559 1.040646 TAGCAACTCTATGAGGCCGG 58.959 55.000 0.00 0.00 33.35 6.13
2392 2560 1.889573 GCAACTCTATGAGGCCGGC 60.890 63.158 21.18 21.18 33.35 6.13
2393 2561 1.592669 CAACTCTATGAGGCCGGCG 60.593 63.158 22.54 5.20 33.35 6.46
2394 2562 2.797278 AACTCTATGAGGCCGGCGG 61.797 63.158 24.35 24.35 33.35 6.13
2395 2563 3.227276 CTCTATGAGGCCGGCGGT 61.227 66.667 28.82 10.59 0.00 5.68
2396 2564 3.506059 CTCTATGAGGCCGGCGGTG 62.506 68.421 28.82 7.25 0.00 4.94
2397 2565 3.849951 CTATGAGGCCGGCGGTGT 61.850 66.667 28.82 15.31 0.00 4.16
2398 2566 3.792053 CTATGAGGCCGGCGGTGTC 62.792 68.421 28.82 23.21 0.00 3.67
2404 2572 4.980805 GCCGGCGGTGTCTTGACA 62.981 66.667 28.82 0.00 0.00 3.58
2405 2573 2.280524 CCGGCGGTGTCTTGACAA 60.281 61.111 19.97 0.00 0.00 3.18
2406 2574 1.671054 CCGGCGGTGTCTTGACAAT 60.671 57.895 19.97 0.00 0.00 2.71
2407 2575 1.497278 CGGCGGTGTCTTGACAATG 59.503 57.895 4.93 2.56 0.00 2.82
2408 2576 1.875963 GGCGGTGTCTTGACAATGG 59.124 57.895 4.93 0.00 0.00 3.16
2409 2577 1.210155 GCGGTGTCTTGACAATGGC 59.790 57.895 4.93 5.76 0.00 4.40
2410 2578 1.237285 GCGGTGTCTTGACAATGGCT 61.237 55.000 4.93 0.00 0.00 4.75
2411 2579 1.238439 CGGTGTCTTGACAATGGCTT 58.762 50.000 4.93 0.00 0.00 4.35
2412 2580 1.069022 CGGTGTCTTGACAATGGCTTG 60.069 52.381 4.93 0.00 38.39 4.01
2413 2581 1.336240 GGTGTCTTGACAATGGCTTGC 60.336 52.381 4.93 0.00 35.69 4.01
2414 2582 1.610522 GTGTCTTGACAATGGCTTGCT 59.389 47.619 4.93 0.00 35.69 3.91
2415 2583 2.035066 GTGTCTTGACAATGGCTTGCTT 59.965 45.455 4.93 0.00 35.69 3.91
2416 2584 2.034939 TGTCTTGACAATGGCTTGCTTG 59.965 45.455 0.44 0.00 35.69 4.01
2417 2585 2.294233 GTCTTGACAATGGCTTGCTTGA 59.706 45.455 0.00 0.00 35.69 3.02
2418 2586 2.294233 TCTTGACAATGGCTTGCTTGAC 59.706 45.455 0.00 0.00 35.69 3.18
2419 2587 1.689984 TGACAATGGCTTGCTTGACA 58.310 45.000 0.00 0.21 35.69 3.58
2420 2588 2.030371 TGACAATGGCTTGCTTGACAA 58.970 42.857 0.00 0.00 35.69 3.18
2421 2589 2.429971 TGACAATGGCTTGCTTGACAAA 59.570 40.909 0.00 0.00 37.96 2.83
2422 2590 3.069872 TGACAATGGCTTGCTTGACAAAT 59.930 39.130 0.00 0.00 37.96 2.32
2423 2591 3.656559 ACAATGGCTTGCTTGACAAATC 58.343 40.909 2.36 0.00 37.96 2.17
2424 2592 3.069872 ACAATGGCTTGCTTGACAAATCA 59.930 39.130 2.36 0.00 37.96 2.57
2425 2593 4.250464 CAATGGCTTGCTTGACAAATCAT 58.750 39.130 0.00 0.00 37.96 2.45
2426 2594 4.546829 ATGGCTTGCTTGACAAATCATT 57.453 36.364 0.00 0.00 37.96 2.57
2427 2595 4.339872 TGGCTTGCTTGACAAATCATTT 57.660 36.364 0.00 0.00 37.96 2.32
2428 2596 4.059511 TGGCTTGCTTGACAAATCATTTG 58.940 39.130 8.67 8.67 45.95 2.32
2429 2597 3.120442 GGCTTGCTTGACAAATCATTTGC 60.120 43.478 10.21 4.06 44.39 3.68
2430 2598 3.744426 GCTTGCTTGACAAATCATTTGCT 59.256 39.130 10.21 0.00 44.39 3.91
2431 2599 4.377022 GCTTGCTTGACAAATCATTTGCTG 60.377 41.667 10.21 0.00 44.39 4.41
2432 2600 3.061322 TGCTTGACAAATCATTTGCTGC 58.939 40.909 10.21 9.53 44.39 5.25
2433 2601 3.243941 TGCTTGACAAATCATTTGCTGCT 60.244 39.130 10.21 0.00 44.39 4.24
2434 2602 4.022155 TGCTTGACAAATCATTTGCTGCTA 60.022 37.500 10.21 0.00 44.39 3.49
2435 2603 4.561606 GCTTGACAAATCATTTGCTGCTAG 59.438 41.667 10.21 7.46 44.39 3.42
2436 2604 5.706916 CTTGACAAATCATTTGCTGCTAGT 58.293 37.500 10.21 0.00 44.39 2.57
2437 2605 5.050644 TGACAAATCATTTGCTGCTAGTG 57.949 39.130 10.21 0.10 44.39 2.74
2438 2606 3.841643 ACAAATCATTTGCTGCTAGTGC 58.158 40.909 10.21 3.44 44.39 4.40
2439 2607 2.838386 AATCATTTGCTGCTAGTGCG 57.162 45.000 0.00 0.00 43.34 5.34
2441 2609 0.321564 TCATTTGCTGCTAGTGCGGT 60.322 50.000 0.00 0.00 46.77 5.68
2442 2610 0.179181 CATTTGCTGCTAGTGCGGTG 60.179 55.000 0.00 0.00 46.77 4.94
2443 2611 1.308069 ATTTGCTGCTAGTGCGGTGG 61.308 55.000 0.00 0.00 46.77 4.61
2444 2612 3.899981 TTGCTGCTAGTGCGGTGGG 62.900 63.158 0.00 0.00 46.77 4.61
2446 2614 3.706373 CTGCTAGTGCGGTGGGGT 61.706 66.667 0.00 0.00 43.34 4.95
2447 2615 3.246112 TGCTAGTGCGGTGGGGTT 61.246 61.111 0.00 0.00 43.34 4.11
2448 2616 2.436115 GCTAGTGCGGTGGGGTTC 60.436 66.667 0.00 0.00 0.00 3.62
2449 2617 2.955881 GCTAGTGCGGTGGGGTTCT 61.956 63.158 0.00 0.00 0.00 3.01
2450 2618 1.218316 CTAGTGCGGTGGGGTTCTC 59.782 63.158 0.00 0.00 0.00 2.87
2451 2619 2.558554 CTAGTGCGGTGGGGTTCTCG 62.559 65.000 0.00 0.00 0.00 4.04
2455 2623 4.452733 CGGTGGGGTTCTCGGCTC 62.453 72.222 0.00 0.00 0.00 4.70
2456 2624 4.452733 GGTGGGGTTCTCGGCTCG 62.453 72.222 0.00 0.00 0.00 5.03
2457 2625 4.452733 GTGGGGTTCTCGGCTCGG 62.453 72.222 0.00 0.00 0.00 4.63
2459 2627 3.703127 GGGGTTCTCGGCTCGGTT 61.703 66.667 0.00 0.00 0.00 4.44
2460 2628 2.434359 GGGTTCTCGGCTCGGTTG 60.434 66.667 0.00 0.00 0.00 3.77
2461 2629 2.654877 GGTTCTCGGCTCGGTTGA 59.345 61.111 0.00 0.00 0.00 3.18
2462 2630 1.218316 GGTTCTCGGCTCGGTTGAT 59.782 57.895 0.00 0.00 0.00 2.57
2463 2631 1.084370 GGTTCTCGGCTCGGTTGATG 61.084 60.000 0.00 0.00 0.00 3.07
2464 2632 1.447838 TTCTCGGCTCGGTTGATGC 60.448 57.895 0.00 0.00 0.00 3.91
2465 2633 3.257561 CTCGGCTCGGTTGATGCG 61.258 66.667 0.00 0.00 0.00 4.73
2469 2637 3.127533 GCTCGGTTGATGCGCCTT 61.128 61.111 4.18 0.00 0.00 4.35
2470 2638 2.787249 CTCGGTTGATGCGCCTTG 59.213 61.111 4.18 0.00 0.00 3.61
2471 2639 2.745884 TCGGTTGATGCGCCTTGG 60.746 61.111 4.18 0.00 0.00 3.61
2472 2640 2.745884 CGGTTGATGCGCCTTGGA 60.746 61.111 4.18 0.00 0.00 3.53
2473 2641 2.753966 CGGTTGATGCGCCTTGGAG 61.754 63.158 4.18 0.00 0.00 3.86
2474 2642 2.409870 GGTTGATGCGCCTTGGAGG 61.410 63.158 4.18 0.00 38.80 4.30
2475 2643 2.045045 TTGATGCGCCTTGGAGGG 60.045 61.111 4.18 0.00 35.37 4.30
2481 2649 4.410400 CGCCTTGGAGGGGTGGTC 62.410 72.222 3.10 0.00 42.78 4.02
2482 2650 3.256960 GCCTTGGAGGGGTGGTCA 61.257 66.667 0.00 0.00 35.37 4.02
2483 2651 3.081554 CCTTGGAGGGGTGGTCAG 58.918 66.667 0.00 0.00 0.00 3.51
2484 2652 1.538876 CCTTGGAGGGGTGGTCAGA 60.539 63.158 0.00 0.00 0.00 3.27
2485 2653 1.679898 CTTGGAGGGGTGGTCAGAC 59.320 63.158 0.00 0.00 0.00 3.51
2486 2654 0.838122 CTTGGAGGGGTGGTCAGACT 60.838 60.000 0.00 0.00 0.00 3.24
2487 2655 0.490017 TTGGAGGGGTGGTCAGACTA 59.510 55.000 0.00 0.00 0.00 2.59
2488 2656 0.716591 TGGAGGGGTGGTCAGACTAT 59.283 55.000 0.00 0.00 0.00 2.12
2489 2657 1.934480 TGGAGGGGTGGTCAGACTATA 59.066 52.381 0.00 0.00 0.00 1.31
2490 2658 2.522705 TGGAGGGGTGGTCAGACTATAT 59.477 50.000 0.00 0.00 0.00 0.86
2491 2659 2.900546 GGAGGGGTGGTCAGACTATATG 59.099 54.545 0.00 0.00 0.00 1.78
2492 2660 3.577919 GAGGGGTGGTCAGACTATATGT 58.422 50.000 0.00 0.00 0.00 2.29
2493 2661 3.967987 GAGGGGTGGTCAGACTATATGTT 59.032 47.826 0.00 0.00 0.00 2.71
2494 2662 3.711704 AGGGGTGGTCAGACTATATGTTG 59.288 47.826 0.00 0.00 0.00 3.33
2495 2663 3.709653 GGGGTGGTCAGACTATATGTTGA 59.290 47.826 0.00 0.00 0.00 3.18
2496 2664 4.202264 GGGGTGGTCAGACTATATGTTGAG 60.202 50.000 0.00 0.00 0.00 3.02
2497 2665 4.649674 GGGTGGTCAGACTATATGTTGAGA 59.350 45.833 0.00 0.00 0.00 3.27
2498 2666 5.305644 GGGTGGTCAGACTATATGTTGAGAT 59.694 44.000 0.00 0.00 0.00 2.75
2499 2667 6.219473 GGTGGTCAGACTATATGTTGAGATG 58.781 44.000 0.00 0.00 0.00 2.90
2500 2668 6.040955 GGTGGTCAGACTATATGTTGAGATGA 59.959 42.308 0.00 0.00 0.00 2.92
2501 2669 6.920758 GTGGTCAGACTATATGTTGAGATGAC 59.079 42.308 0.00 0.00 34.78 3.06
2502 2670 6.040955 TGGTCAGACTATATGTTGAGATGACC 59.959 42.308 12.43 12.43 44.45 4.02
2503 2671 6.040955 GGTCAGACTATATGTTGAGATGACCA 59.959 42.308 14.02 0.00 44.08 4.02
2504 2672 6.920758 GTCAGACTATATGTTGAGATGACCAC 59.079 42.308 0.00 0.00 32.07 4.16
2505 2673 6.040955 TCAGACTATATGTTGAGATGACCACC 59.959 42.308 0.00 0.00 0.00 4.61
2506 2674 5.899547 AGACTATATGTTGAGATGACCACCA 59.100 40.000 0.00 0.00 0.00 4.17
2507 2675 5.918608 ACTATATGTTGAGATGACCACCAC 58.081 41.667 0.00 0.00 0.00 4.16
2508 2676 2.099141 ATGTTGAGATGACCACCACG 57.901 50.000 0.00 0.00 0.00 4.94
2509 2677 0.034756 TGTTGAGATGACCACCACGG 59.965 55.000 0.00 0.00 42.50 4.94
2510 2678 0.320374 GTTGAGATGACCACCACGGA 59.680 55.000 0.00 0.00 38.63 4.69
2511 2679 1.066143 GTTGAGATGACCACCACGGAT 60.066 52.381 0.00 0.00 38.63 4.18
2512 2680 0.536724 TGAGATGACCACCACGGATG 59.463 55.000 0.00 0.00 38.63 3.51
2513 2681 0.537188 GAGATGACCACCACGGATGT 59.463 55.000 0.00 0.00 38.63 3.06
2514 2682 0.250234 AGATGACCACCACGGATGTG 59.750 55.000 0.00 0.00 46.00 3.21
2515 2683 0.036388 GATGACCACCACGGATGTGT 60.036 55.000 0.00 0.00 44.92 3.72
2516 2684 0.400213 ATGACCACCACGGATGTGTT 59.600 50.000 0.00 0.00 44.92 3.32
2517 2685 0.533978 TGACCACCACGGATGTGTTG 60.534 55.000 0.00 0.00 44.92 3.33
2519 2687 4.473643 CACCACGGATGTGTTGGT 57.526 55.556 0.00 0.00 44.92 3.67
2520 2688 1.948508 CACCACGGATGTGTTGGTG 59.051 57.895 5.63 5.63 44.92 4.17
2521 2689 0.533978 CACCACGGATGTGTTGGTGA 60.534 55.000 13.63 0.00 44.92 4.02
2522 2690 0.250295 ACCACGGATGTGTTGGTGAG 60.250 55.000 0.00 0.00 44.92 3.51
2523 2691 0.034756 CCACGGATGTGTTGGTGAGA 59.965 55.000 0.00 0.00 44.92 3.27
2524 2692 1.148310 CACGGATGTGTTGGTGAGAC 58.852 55.000 0.00 0.00 41.34 3.36
2525 2693 0.319555 ACGGATGTGTTGGTGAGACG 60.320 55.000 0.00 0.00 0.00 4.18
2526 2694 1.014044 CGGATGTGTTGGTGAGACGG 61.014 60.000 0.00 0.00 0.00 4.79
2527 2695 0.034896 GGATGTGTTGGTGAGACGGT 59.965 55.000 0.00 0.00 0.00 4.83
2528 2696 1.429463 GATGTGTTGGTGAGACGGTC 58.571 55.000 0.00 0.00 0.00 4.79
2529 2697 0.756294 ATGTGTTGGTGAGACGGTCA 59.244 50.000 11.27 0.00 0.00 4.02
2530 2698 0.104120 TGTGTTGGTGAGACGGTCAG 59.896 55.000 11.27 0.00 35.13 3.51
2531 2699 0.600255 GTGTTGGTGAGACGGTCAGG 60.600 60.000 11.27 0.00 35.13 3.86
2532 2700 1.004918 GTTGGTGAGACGGTCAGGG 60.005 63.158 11.27 0.00 35.13 4.45
2533 2701 1.458777 TTGGTGAGACGGTCAGGGT 60.459 57.895 11.27 0.00 35.13 4.34
2534 2702 1.469335 TTGGTGAGACGGTCAGGGTC 61.469 60.000 11.27 0.00 35.13 4.46
2535 2703 1.606889 GGTGAGACGGTCAGGGTCT 60.607 63.158 11.27 0.00 46.91 3.85
2536 2704 1.587054 GTGAGACGGTCAGGGTCTG 59.413 63.158 11.27 0.00 44.41 3.51
2537 2705 1.153061 TGAGACGGTCAGGGTCTGT 59.847 57.895 11.27 0.00 44.41 3.41
2538 2706 0.402887 TGAGACGGTCAGGGTCTGTA 59.597 55.000 11.27 0.00 44.41 2.74
2539 2707 1.096416 GAGACGGTCAGGGTCTGTAG 58.904 60.000 11.27 0.00 44.41 2.74
2540 2708 0.323542 AGACGGTCAGGGTCTGTAGG 60.324 60.000 11.27 0.00 42.87 3.18
2541 2709 1.305046 ACGGTCAGGGTCTGTAGGG 60.305 63.158 0.00 0.00 32.61 3.53
2542 2710 2.722201 CGGTCAGGGTCTGTAGGGC 61.722 68.421 0.00 0.00 32.61 5.19
2543 2711 2.722201 GGTCAGGGTCTGTAGGGCG 61.722 68.421 0.00 0.00 32.61 6.13
2544 2712 1.982938 GTCAGGGTCTGTAGGGCGT 60.983 63.158 0.00 0.00 32.61 5.68
2545 2713 1.681327 TCAGGGTCTGTAGGGCGTC 60.681 63.158 0.00 0.00 32.61 5.19
2546 2714 1.682684 CAGGGTCTGTAGGGCGTCT 60.683 63.158 0.00 0.00 0.00 4.18
2547 2715 1.078710 AGGGTCTGTAGGGCGTCTT 59.921 57.895 0.00 0.00 0.00 3.01
2548 2716 0.971447 AGGGTCTGTAGGGCGTCTTC 60.971 60.000 0.00 0.00 0.00 2.87
2549 2717 1.516423 GGTCTGTAGGGCGTCTTCC 59.484 63.158 0.00 0.00 0.00 3.46
2550 2718 0.971447 GGTCTGTAGGGCGTCTTCCT 60.971 60.000 0.00 0.00 38.36 3.36
2551 2719 0.896226 GTCTGTAGGGCGTCTTCCTT 59.104 55.000 0.00 0.00 35.92 3.36
2552 2720 0.895530 TCTGTAGGGCGTCTTCCTTG 59.104 55.000 0.00 0.00 35.92 3.61
2553 2721 0.108138 CTGTAGGGCGTCTTCCTTGG 60.108 60.000 0.00 0.00 35.92 3.61
2554 2722 1.221021 GTAGGGCGTCTTCCTTGGG 59.779 63.158 0.00 0.00 35.92 4.12
2555 2723 1.993391 TAGGGCGTCTTCCTTGGGG 60.993 63.158 0.00 0.00 35.92 4.96
2556 2724 2.465010 TAGGGCGTCTTCCTTGGGGA 62.465 60.000 0.00 0.00 40.36 4.81
2575 2743 3.031013 GGAAATACCCAATGGTTCCTGG 58.969 50.000 10.99 0.00 44.75 4.45
2579 2747 3.588742 CCCAATGGTTCCTGGGTAC 57.411 57.895 0.00 0.00 46.37 3.34
2580 2748 0.701731 CCCAATGGTTCCTGGGTACA 59.298 55.000 0.00 0.00 46.37 2.90
2581 2749 1.287739 CCCAATGGTTCCTGGGTACAT 59.712 52.381 0.00 0.00 46.37 2.29
2582 2750 2.512056 CCCAATGGTTCCTGGGTACATA 59.488 50.000 0.00 0.00 46.37 2.29
2583 2751 3.140144 CCCAATGGTTCCTGGGTACATAT 59.860 47.826 0.00 0.00 46.37 1.78
2584 2752 4.144297 CCAATGGTTCCTGGGTACATATG 58.856 47.826 0.00 0.00 0.00 1.78
2585 2753 4.386312 CCAATGGTTCCTGGGTACATATGT 60.386 45.833 13.93 13.93 0.00 2.29
2586 2754 5.163141 CCAATGGTTCCTGGGTACATATGTA 60.163 44.000 11.62 11.62 0.00 2.29
2587 2755 6.467194 CCAATGGTTCCTGGGTACATATGTAT 60.467 42.308 18.27 0.00 32.54 2.29
2588 2756 5.818678 TGGTTCCTGGGTACATATGTATC 57.181 43.478 18.27 17.37 32.54 2.24
2589 2757 5.473273 TGGTTCCTGGGTACATATGTATCT 58.527 41.667 22.37 0.00 32.39 1.98
2590 2758 5.908831 TGGTTCCTGGGTACATATGTATCTT 59.091 40.000 22.37 0.00 32.39 2.40
2591 2759 7.077095 TGGTTCCTGGGTACATATGTATCTTA 58.923 38.462 22.37 12.77 32.39 2.10
2592 2760 7.737607 TGGTTCCTGGGTACATATGTATCTTAT 59.262 37.037 22.37 0.00 32.39 1.73
2593 2761 9.263446 GGTTCCTGGGTACATATGTATCTTATA 57.737 37.037 22.37 8.70 32.39 0.98
2596 2764 9.434275 TCCTGGGTACATATGTATCTTATATGG 57.566 37.037 22.37 15.35 40.92 2.74
2597 2765 9.434275 CCTGGGTACATATGTATCTTATATGGA 57.566 37.037 22.37 0.00 40.92 3.41
2672 2840 7.633361 TTAGAGTAAACTTGACTTACTTGCG 57.367 36.000 0.00 0.00 39.22 4.85
2673 2841 4.448060 AGAGTAAACTTGACTTACTTGCGC 59.552 41.667 0.00 0.00 39.22 6.09
2674 2842 4.124238 AGTAAACTTGACTTACTTGCGCA 58.876 39.130 5.66 5.66 36.42 6.09
2675 2843 3.334272 AAACTTGACTTACTTGCGCAC 57.666 42.857 11.12 0.00 0.00 5.34
2676 2844 2.240493 ACTTGACTTACTTGCGCACT 57.760 45.000 11.12 0.00 0.00 4.40
2677 2845 3.380479 ACTTGACTTACTTGCGCACTA 57.620 42.857 11.12 0.00 0.00 2.74
2678 2846 3.318017 ACTTGACTTACTTGCGCACTAG 58.682 45.455 11.12 8.97 0.00 2.57
2679 2847 3.243771 ACTTGACTTACTTGCGCACTAGT 60.244 43.478 18.09 18.09 35.90 2.57
2680 2848 4.022589 ACTTGACTTACTTGCGCACTAGTA 60.023 41.667 11.12 14.33 33.72 1.82
2681 2849 4.713824 TGACTTACTTGCGCACTAGTAT 57.286 40.909 19.70 8.54 34.71 2.12
2682 2850 5.823209 TGACTTACTTGCGCACTAGTATA 57.177 39.130 19.70 11.39 34.71 1.47
2683 2851 6.387041 TGACTTACTTGCGCACTAGTATAT 57.613 37.500 19.70 12.35 34.71 0.86
2684 2852 6.206498 TGACTTACTTGCGCACTAGTATATG 58.794 40.000 19.70 15.27 34.71 1.78
2685 2853 6.038936 TGACTTACTTGCGCACTAGTATATGA 59.961 38.462 19.70 6.91 34.71 2.15
2686 2854 6.802608 ACTTACTTGCGCACTAGTATATGAA 58.197 36.000 19.70 8.11 34.71 2.57
2687 2855 7.434492 ACTTACTTGCGCACTAGTATATGAAT 58.566 34.615 19.70 0.00 34.71 2.57
2688 2856 7.926555 ACTTACTTGCGCACTAGTATATGAATT 59.073 33.333 19.70 1.85 34.71 2.17
2689 2857 8.657074 TTACTTGCGCACTAGTATATGAATTT 57.343 30.769 19.70 0.00 34.71 1.82
2690 2858 7.553881 ACTTGCGCACTAGTATATGAATTTT 57.446 32.000 11.12 0.00 29.61 1.82
2691 2859 7.630924 ACTTGCGCACTAGTATATGAATTTTC 58.369 34.615 11.12 0.00 29.61 2.29
2692 2860 7.279981 ACTTGCGCACTAGTATATGAATTTTCA 59.720 33.333 11.12 0.00 34.30 2.69
2693 2861 6.943981 TGCGCACTAGTATATGAATTTTCAC 58.056 36.000 5.66 0.00 40.49 3.18
2694 2862 6.536941 TGCGCACTAGTATATGAATTTTCACA 59.463 34.615 5.66 0.00 40.49 3.58
2695 2863 7.065204 TGCGCACTAGTATATGAATTTTCACAA 59.935 33.333 5.66 0.00 40.49 3.33
2696 2864 7.908082 GCGCACTAGTATATGAATTTTCACAAA 59.092 33.333 0.30 0.00 40.49 2.83
2697 2865 9.767684 CGCACTAGTATATGAATTTTCACAAAA 57.232 29.630 0.00 0.00 40.49 2.44
2720 2888 6.730960 AAAAGAAACTACGTTGACTTCACA 57.269 33.333 3.44 0.00 0.00 3.58
2721 2889 5.968387 AAGAAACTACGTTGACTTCACAG 57.032 39.130 3.44 0.00 0.00 3.66
2722 2890 3.802685 AGAAACTACGTTGACTTCACAGC 59.197 43.478 3.44 0.00 0.00 4.40
2723 2891 1.767289 ACTACGTTGACTTCACAGCG 58.233 50.000 3.44 0.00 46.51 5.18
2724 2892 1.335810 ACTACGTTGACTTCACAGCGA 59.664 47.619 3.44 0.00 44.63 4.93
2725 2893 2.223641 ACTACGTTGACTTCACAGCGAA 60.224 45.455 3.44 0.00 44.63 4.70
2726 2894 1.647346 ACGTTGACTTCACAGCGAAA 58.353 45.000 11.22 0.00 44.63 3.46
2727 2895 2.004017 ACGTTGACTTCACAGCGAAAA 58.996 42.857 11.22 0.00 44.63 2.29
2728 2896 2.417239 ACGTTGACTTCACAGCGAAAAA 59.583 40.909 11.22 0.00 44.63 1.94
2729 2897 3.029074 CGTTGACTTCACAGCGAAAAAG 58.971 45.455 0.00 0.00 44.63 2.27
2730 2898 3.242284 CGTTGACTTCACAGCGAAAAAGA 60.242 43.478 0.00 0.00 44.63 2.52
2731 2899 3.944422 TGACTTCACAGCGAAAAAGAC 57.056 42.857 0.00 0.00 31.71 3.01
2732 2900 3.266636 TGACTTCACAGCGAAAAAGACA 58.733 40.909 0.00 0.00 31.71 3.41
2733 2901 3.687212 TGACTTCACAGCGAAAAAGACAA 59.313 39.130 0.00 0.00 31.71 3.18
2734 2902 4.155099 TGACTTCACAGCGAAAAAGACAAA 59.845 37.500 0.00 0.00 31.71 2.83
2735 2903 5.054390 ACTTCACAGCGAAAAAGACAAAA 57.946 34.783 0.00 0.00 31.71 2.44
2736 2904 5.465935 ACTTCACAGCGAAAAAGACAAAAA 58.534 33.333 0.00 0.00 31.71 1.94
2765 2933 8.437360 TTTGCTATTATAGGTCACTGTTCATG 57.563 34.615 1.12 0.00 0.00 3.07
2766 2934 5.991606 TGCTATTATAGGTCACTGTTCATGC 59.008 40.000 1.12 0.00 0.00 4.06
2767 2935 6.183361 TGCTATTATAGGTCACTGTTCATGCT 60.183 38.462 1.12 0.00 0.00 3.79
2768 2936 6.708054 GCTATTATAGGTCACTGTTCATGCTT 59.292 38.462 1.12 0.00 0.00 3.91
2769 2937 7.227512 GCTATTATAGGTCACTGTTCATGCTTT 59.772 37.037 1.12 0.00 0.00 3.51
2770 2938 7.944729 ATTATAGGTCACTGTTCATGCTTTT 57.055 32.000 0.00 0.00 0.00 2.27
2771 2939 7.759489 TTATAGGTCACTGTTCATGCTTTTT 57.241 32.000 0.00 0.00 0.00 1.94
2815 2983 9.942850 TTTTTGAAAAGAAGTCAAAGAGGAATT 57.057 25.926 0.47 0.00 43.76 2.17
2816 2984 9.942850 TTTTGAAAAGAAGTCAAAGAGGAATTT 57.057 25.926 0.47 0.00 43.76 1.82
2817 2985 9.942850 TTTGAAAAGAAGTCAAAGAGGAATTTT 57.057 25.926 0.00 0.00 39.46 1.82
2827 2995 9.546428 AGTCAAAGAGGAATTTTATTTTGTTGG 57.454 29.630 0.00 0.00 0.00 3.77
2828 2996 9.541143 GTCAAAGAGGAATTTTATTTTGTTGGA 57.459 29.630 0.00 0.00 0.00 3.53
2846 3014 9.669887 TTTGTTGGAACTTTTCTTACTAGTACA 57.330 29.630 0.91 0.00 0.00 2.90
2847 3015 9.669887 TTGTTGGAACTTTTCTTACTAGTACAA 57.330 29.630 0.91 0.00 0.00 2.41
2848 3016 9.841295 TGTTGGAACTTTTCTTACTAGTACAAT 57.159 29.630 0.91 0.00 0.00 2.71
2850 3018 8.842358 TGGAACTTTTCTTACTAGTACAATGG 57.158 34.615 0.91 0.00 0.00 3.16
2851 3019 8.653191 TGGAACTTTTCTTACTAGTACAATGGA 58.347 33.333 0.91 0.00 0.00 3.41
2852 3020 9.498176 GGAACTTTTCTTACTAGTACAATGGAA 57.502 33.333 0.91 0.59 0.00 3.53
2854 3022 9.503399 AACTTTTCTTACTAGTACAATGGAAGG 57.497 33.333 0.91 0.00 0.00 3.46
2855 3023 8.657712 ACTTTTCTTACTAGTACAATGGAAGGT 58.342 33.333 0.91 0.00 0.00 3.50
2856 3024 9.152595 CTTTTCTTACTAGTACAATGGAAGGTC 57.847 37.037 0.91 0.00 0.00 3.85
2857 3025 7.786046 TTCTTACTAGTACAATGGAAGGTCA 57.214 36.000 0.91 0.00 0.00 4.02
2858 3026 7.786046 TCTTACTAGTACAATGGAAGGTCAA 57.214 36.000 0.91 0.00 0.00 3.18
2859 3027 7.837863 TCTTACTAGTACAATGGAAGGTCAAG 58.162 38.462 0.91 0.00 0.00 3.02
2860 3028 7.453752 TCTTACTAGTACAATGGAAGGTCAAGT 59.546 37.037 0.91 0.00 0.00 3.16
2861 3029 6.435292 ACTAGTACAATGGAAGGTCAAGTT 57.565 37.500 0.00 0.00 0.00 2.66
2862 3030 6.838382 ACTAGTACAATGGAAGGTCAAGTTT 58.162 36.000 0.00 0.00 0.00 2.66
2863 3031 7.287810 ACTAGTACAATGGAAGGTCAAGTTTT 58.712 34.615 0.00 0.00 0.00 2.43
2864 3032 7.778382 ACTAGTACAATGGAAGGTCAAGTTTTT 59.222 33.333 0.00 0.00 0.00 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
50 51 6.410540 ACCAAGTCTGAAATATCAAGGTCTC 58.589 40.000 0.00 0.00 34.49 3.36
101 102 5.131594 TGATTTCGTCATGGAAAATGCAA 57.868 34.783 0.00 0.00 39.19 4.08
130 131 9.252962 GCAGCACAAAGATTAAATAATAATGCT 57.747 29.630 0.00 0.00 0.00 3.79
131 132 9.252962 AGCAGCACAAAGATTAAATAATAATGC 57.747 29.630 0.00 0.00 0.00 3.56
172 179 8.420222 ACTGACAGATCTGATACAAATAGGAAG 58.580 37.037 29.27 12.37 0.00 3.46
203 210 3.250744 CACGTTCCAGTCATACAACGAT 58.749 45.455 9.81 0.00 43.39 3.73
264 272 2.032680 TCGCTTTACTATTGGTGCCC 57.967 50.000 0.00 0.00 0.00 5.36
310 318 4.309950 AGGAACGGTGGTGCGTCC 62.310 66.667 0.00 0.00 0.00 4.79
332 344 1.578206 GAGCAAGACCCGGAAGCAAC 61.578 60.000 0.73 0.00 0.00 4.17
350 362 3.936203 GGCCGTGGTGACTGGTGA 61.936 66.667 0.00 0.00 0.00 4.02
456 585 1.271217 GGGAGGTGGTGGTTACTGTTC 60.271 57.143 0.00 0.00 0.00 3.18
474 603 0.178992 TTCAACACCTTCCTGCAGGG 60.179 55.000 32.23 18.81 38.42 4.45
495 624 2.708216 TCAATCAATCGGGCTGCTTA 57.292 45.000 0.00 0.00 0.00 3.09
581 711 1.739562 GGAAGAGGCAGCTGTCGTG 60.740 63.158 16.64 0.00 0.00 4.35
583 713 0.603707 TTTGGAAGAGGCAGCTGTCG 60.604 55.000 16.64 0.00 0.00 4.35
596 726 2.975799 GGCCACGCGAGTTTGGAA 60.976 61.111 15.93 0.00 46.40 3.53
650 780 7.910683 GGCCAAACGATAATTTTCTTCTTCTAG 59.089 37.037 0.00 0.00 0.00 2.43
651 781 7.413657 CGGCCAAACGATAATTTTCTTCTTCTA 60.414 37.037 2.24 0.00 35.47 2.10
652 782 6.621613 GGCCAAACGATAATTTTCTTCTTCT 58.378 36.000 0.00 0.00 0.00 2.85
669 799 1.102978 AATATGCAGTCCGGCCAAAC 58.897 50.000 2.24 0.00 0.00 2.93
688 818 6.611642 AGAACTCCAGTTGTATAGGAAGCATA 59.388 38.462 0.00 0.00 38.56 3.14
689 819 5.426833 AGAACTCCAGTTGTATAGGAAGCAT 59.573 40.000 0.00 0.00 38.56 3.79
690 820 4.777896 AGAACTCCAGTTGTATAGGAAGCA 59.222 41.667 0.00 0.00 38.56 3.91
696 826 6.037610 GCCAATTCAGAACTCCAGTTGTATAG 59.962 42.308 0.00 0.00 38.56 1.31
723 853 1.602323 GACCGTCCAAATGCCACCA 60.602 57.895 0.00 0.00 0.00 4.17
769 917 3.591695 TGGATGGCTTGCATTGGTATA 57.408 42.857 0.00 0.00 0.00 1.47
770 918 2.457813 TGGATGGCTTGCATTGGTAT 57.542 45.000 0.00 0.00 0.00 2.73
845 993 5.377478 AGGATCTCCGGAATTAACAAATCC 58.623 41.667 5.23 7.94 42.08 3.01
955 1103 7.327761 GCGCGACTATAAATAGTGGATTTCTTA 59.672 37.037 12.10 0.00 43.27 2.10
956 1104 6.145696 GCGCGACTATAAATAGTGGATTTCTT 59.854 38.462 12.10 0.00 43.27 2.52
958 1106 5.442909 CGCGCGACTATAAATAGTGGATTTC 60.443 44.000 28.94 0.00 43.27 2.17
959 1107 4.384846 CGCGCGACTATAAATAGTGGATTT 59.615 41.667 28.94 0.00 43.27 2.17
1034 1188 2.103373 TGTCAGACTCCATGGCTCTAC 58.897 52.381 6.96 8.76 0.00 2.59
1121 1275 0.179029 ACCCTTGGAAACGTCCTGTG 60.179 55.000 0.00 0.00 45.22 3.66
1138 1292 0.322816 TTCAGATGCTTGGGCTCACC 60.323 55.000 0.00 0.00 39.59 4.02
1234 1388 4.779733 GCTCTCCTCACCCCGGGA 62.780 72.222 26.32 0.00 0.00 5.14
1776 1930 2.670934 CACTGCTCCACCCACAGC 60.671 66.667 0.00 0.00 34.72 4.40
1869 2023 8.514136 TTAATTGGAAAAATGAAACGCTAGTG 57.486 30.769 0.59 0.59 0.00 2.74
1870 2024 9.705290 AATTAATTGGAAAAATGAAACGCTAGT 57.295 25.926 0.00 0.00 0.00 2.57
1987 2141 4.881850 GGATTTCACATTTCGGGATACAGT 59.118 41.667 0.00 0.00 39.74 3.55
1988 2142 4.881273 TGGATTTCACATTTCGGGATACAG 59.119 41.667 0.00 0.00 39.74 2.74
2025 2179 8.446599 TTTCGTATTTCCTTCACTTCTTTTCT 57.553 30.769 0.00 0.00 0.00 2.52
2029 2183 7.336176 GGGTATTTCGTATTTCCTTCACTTCTT 59.664 37.037 0.00 0.00 0.00 2.52
2030 2184 6.822170 GGGTATTTCGTATTTCCTTCACTTCT 59.178 38.462 0.00 0.00 0.00 2.85
2031 2185 6.037940 GGGGTATTTCGTATTTCCTTCACTTC 59.962 42.308 0.00 0.00 0.00 3.01
2034 2188 4.577693 GGGGGTATTTCGTATTTCCTTCAC 59.422 45.833 0.00 0.00 0.00 3.18
2035 2189 4.475747 AGGGGGTATTTCGTATTTCCTTCA 59.524 41.667 0.00 0.00 0.00 3.02
2036 2190 5.045012 AGGGGGTATTTCGTATTTCCTTC 57.955 43.478 0.00 0.00 0.00 3.46
2046 2200 9.269453 CTATAAAAGTTTAGAGGGGGTATTTCG 57.731 37.037 0.00 0.00 30.45 3.46
2082 2236 9.892130 CTCCCTCTGTAAACTTTTATAAGATGT 57.108 33.333 0.00 0.00 35.30 3.06
2083 2237 8.831550 GCTCCCTCTGTAAACTTTTATAAGATG 58.168 37.037 0.00 0.00 35.30 2.90
2084 2238 8.548877 TGCTCCCTCTGTAAACTTTTATAAGAT 58.451 33.333 0.00 0.00 35.30 2.40
2085 2239 7.822822 GTGCTCCCTCTGTAAACTTTTATAAGA 59.177 37.037 0.00 0.00 35.30 2.10
2088 2242 7.011499 TGTGCTCCCTCTGTAAACTTTTATA 57.989 36.000 0.00 0.00 0.00 0.98
2089 2243 5.876357 TGTGCTCCCTCTGTAAACTTTTAT 58.124 37.500 0.00 0.00 0.00 1.40
2091 2245 4.164843 TGTGCTCCCTCTGTAAACTTTT 57.835 40.909 0.00 0.00 0.00 2.27
2092 2246 3.857157 TGTGCTCCCTCTGTAAACTTT 57.143 42.857 0.00 0.00 0.00 2.66
2096 2250 4.777896 AGTAGATTGTGCTCCCTCTGTAAA 59.222 41.667 0.00 0.00 0.00 2.01
2097 2251 4.353777 AGTAGATTGTGCTCCCTCTGTAA 58.646 43.478 0.00 0.00 0.00 2.41
2098 2252 3.982516 AGTAGATTGTGCTCCCTCTGTA 58.017 45.455 0.00 0.00 0.00 2.74
2099 2253 2.826488 AGTAGATTGTGCTCCCTCTGT 58.174 47.619 0.00 0.00 0.00 3.41
2100 2254 3.431486 GGAAGTAGATTGTGCTCCCTCTG 60.431 52.174 0.00 0.00 0.00 3.35
2101 2255 2.769095 GGAAGTAGATTGTGCTCCCTCT 59.231 50.000 0.00 0.00 0.00 3.69
2102 2256 2.769095 AGGAAGTAGATTGTGCTCCCTC 59.231 50.000 0.00 0.00 0.00 4.30
2103 2257 2.769095 GAGGAAGTAGATTGTGCTCCCT 59.231 50.000 0.00 0.00 0.00 4.20
2104 2258 2.482142 CGAGGAAGTAGATTGTGCTCCC 60.482 54.545 0.00 0.00 0.00 4.30
2105 2259 2.482142 CCGAGGAAGTAGATTGTGCTCC 60.482 54.545 0.00 0.00 0.00 4.70
2106 2260 2.166664 ACCGAGGAAGTAGATTGTGCTC 59.833 50.000 0.00 0.00 0.00 4.26
2107 2261 2.166664 GACCGAGGAAGTAGATTGTGCT 59.833 50.000 0.00 0.00 0.00 4.40
2108 2262 2.166664 AGACCGAGGAAGTAGATTGTGC 59.833 50.000 0.00 0.00 0.00 4.57
2109 2263 3.487711 CGAGACCGAGGAAGTAGATTGTG 60.488 52.174 0.00 0.00 38.22 3.33
2118 2272 1.399089 GAGACTTCGAGACCGAGGAAG 59.601 57.143 4.05 0.00 46.39 3.46
2119 2273 1.271217 TGAGACTTCGAGACCGAGGAA 60.271 52.381 4.05 0.00 46.39 3.36
2122 2276 2.031069 TGTTTGAGACTTCGAGACCGAG 60.031 50.000 0.00 0.00 46.39 4.63
2130 2284 3.565516 TGATCGAGTGTTTGAGACTTCG 58.434 45.455 0.00 0.00 37.38 3.79
2134 2288 9.855361 CATTATTATTGATCGAGTGTTTGAGAC 57.145 33.333 0.00 0.00 0.00 3.36
2154 2308 9.533831 ACCTTTCTTGAACATAAGGACATTATT 57.466 29.630 6.72 0.00 39.60 1.40
2166 2327 8.739972 GTGTGGAAATATACCTTTCTTGAACAT 58.260 33.333 0.00 0.00 35.81 2.71
2173 2334 9.614792 GATTACAGTGTGGAAATATACCTTTCT 57.385 33.333 5.88 0.00 35.81 2.52
2174 2335 8.837389 GGATTACAGTGTGGAAATATACCTTTC 58.163 37.037 5.88 0.00 34.95 2.62
2187 2348 3.758554 CCAAAGGAAGGATTACAGTGTGG 59.241 47.826 5.88 0.00 0.00 4.17
2188 2349 4.398319 ACCAAAGGAAGGATTACAGTGTG 58.602 43.478 5.88 0.00 0.00 3.82
2189 2350 4.724279 ACCAAAGGAAGGATTACAGTGT 57.276 40.909 0.00 0.00 0.00 3.55
2190 2351 6.405278 AAAACCAAAGGAAGGATTACAGTG 57.595 37.500 0.00 0.00 0.00 3.66
2191 2352 7.562088 TGTTAAAACCAAAGGAAGGATTACAGT 59.438 33.333 0.00 0.00 0.00 3.55
2192 2353 7.947282 TGTTAAAACCAAAGGAAGGATTACAG 58.053 34.615 0.00 0.00 0.00 2.74
2194 2355 8.418662 AGTTGTTAAAACCAAAGGAAGGATTAC 58.581 33.333 0.00 0.00 0.00 1.89
2195 2356 8.417884 CAGTTGTTAAAACCAAAGGAAGGATTA 58.582 33.333 0.00 0.00 0.00 1.75
2235 2403 4.260907 CGAATTGATAGGTGATTGTGCTGG 60.261 45.833 0.00 0.00 0.00 4.85
2236 2404 4.571984 TCGAATTGATAGGTGATTGTGCTG 59.428 41.667 0.00 0.00 0.00 4.41
2237 2405 4.769688 TCGAATTGATAGGTGATTGTGCT 58.230 39.130 0.00 0.00 0.00 4.40
2238 2406 4.024556 CCTCGAATTGATAGGTGATTGTGC 60.025 45.833 0.00 0.00 0.00 4.57
2239 2407 5.118990 ACCTCGAATTGATAGGTGATTGTG 58.881 41.667 2.86 0.00 42.08 3.33
2240 2408 5.359194 ACCTCGAATTGATAGGTGATTGT 57.641 39.130 2.86 0.00 42.08 2.71
2241 2409 6.074302 CGTAACCTCGAATTGATAGGTGATTG 60.074 42.308 4.22 0.00 42.86 2.67
2242 2410 5.983720 CGTAACCTCGAATTGATAGGTGATT 59.016 40.000 4.22 0.00 42.86 2.57
2243 2411 5.301045 TCGTAACCTCGAATTGATAGGTGAT 59.699 40.000 4.22 0.00 42.86 3.06
2244 2412 4.641541 TCGTAACCTCGAATTGATAGGTGA 59.358 41.667 4.22 0.00 42.86 4.02
2245 2413 4.928601 TCGTAACCTCGAATTGATAGGTG 58.071 43.478 4.22 0.00 42.86 4.00
2246 2414 5.587388 TTCGTAACCTCGAATTGATAGGT 57.413 39.130 0.00 0.00 45.62 3.08
2247 2415 5.050972 GCTTTCGTAACCTCGAATTGATAGG 60.051 44.000 2.57 0.00 46.55 2.57
2248 2416 5.518847 TGCTTTCGTAACCTCGAATTGATAG 59.481 40.000 2.57 0.00 46.55 2.08
2249 2417 5.412640 TGCTTTCGTAACCTCGAATTGATA 58.587 37.500 2.57 0.00 46.55 2.15
2250 2418 4.250464 TGCTTTCGTAACCTCGAATTGAT 58.750 39.130 2.57 0.00 46.55 2.57
2251 2419 3.655486 TGCTTTCGTAACCTCGAATTGA 58.345 40.909 2.57 0.00 46.55 2.57
2252 2420 3.432252 ACTGCTTTCGTAACCTCGAATTG 59.568 43.478 2.57 1.51 46.55 2.32
2253 2421 3.432252 CACTGCTTTCGTAACCTCGAATT 59.568 43.478 2.57 0.00 46.55 2.17
2254 2422 2.993899 CACTGCTTTCGTAACCTCGAAT 59.006 45.455 2.57 0.00 46.55 3.34
2255 2423 2.034939 TCACTGCTTTCGTAACCTCGAA 59.965 45.455 0.00 0.00 45.87 3.71
2256 2424 1.610038 TCACTGCTTTCGTAACCTCGA 59.390 47.619 0.00 0.00 38.08 4.04
2257 2425 2.060326 TCACTGCTTTCGTAACCTCG 57.940 50.000 0.00 0.00 0.00 4.63
2258 2426 2.157863 GCTTCACTGCTTTCGTAACCTC 59.842 50.000 0.00 0.00 0.00 3.85
2259 2427 2.143925 GCTTCACTGCTTTCGTAACCT 58.856 47.619 0.00 0.00 0.00 3.50
2260 2428 1.197036 GGCTTCACTGCTTTCGTAACC 59.803 52.381 0.00 0.00 0.00 2.85
2261 2429 1.197036 GGGCTTCACTGCTTTCGTAAC 59.803 52.381 0.00 0.00 0.00 2.50
2262 2430 1.519408 GGGCTTCACTGCTTTCGTAA 58.481 50.000 0.00 0.00 0.00 3.18
2263 2431 0.321298 GGGGCTTCACTGCTTTCGTA 60.321 55.000 0.00 0.00 0.00 3.43
2264 2432 1.600916 GGGGCTTCACTGCTTTCGT 60.601 57.895 0.00 0.00 0.00 3.85
2265 2433 2.335712 GGGGGCTTCACTGCTTTCG 61.336 63.158 0.00 0.00 0.00 3.46
2266 2434 0.962855 GAGGGGGCTTCACTGCTTTC 60.963 60.000 0.00 0.00 0.00 2.62
2267 2435 1.075659 GAGGGGGCTTCACTGCTTT 59.924 57.895 0.00 0.00 0.00 3.51
2268 2436 1.846712 GAGAGGGGGCTTCACTGCTT 61.847 60.000 0.00 0.00 0.00 3.91
2269 2437 2.204059 AGAGGGGGCTTCACTGCT 60.204 61.111 0.00 0.00 0.00 4.24
2270 2438 1.919600 ATGAGAGGGGGCTTCACTGC 61.920 60.000 0.00 0.00 0.00 4.40
2271 2439 0.622665 AATGAGAGGGGGCTTCACTG 59.377 55.000 0.00 0.00 0.00 3.66
2272 2440 0.622665 CAATGAGAGGGGGCTTCACT 59.377 55.000 0.00 0.00 0.00 3.41
2273 2441 0.620556 TCAATGAGAGGGGGCTTCAC 59.379 55.000 0.00 0.00 0.00 3.18
2274 2442 0.914644 CTCAATGAGAGGGGGCTTCA 59.085 55.000 3.77 0.00 40.84 3.02
2275 2443 1.207791 TCTCAATGAGAGGGGGCTTC 58.792 55.000 9.18 0.00 44.81 3.86
2276 2444 3.424640 TCTCAATGAGAGGGGGCTT 57.575 52.632 9.18 0.00 44.81 4.35
2284 2452 3.184628 ACATCCAACCCTCTCAATGAGA 58.815 45.455 12.87 12.87 45.39 3.27
2285 2453 3.539604 GACATCCAACCCTCTCAATGAG 58.460 50.000 3.38 3.38 42.30 2.90
2286 2454 2.093500 CGACATCCAACCCTCTCAATGA 60.093 50.000 0.00 0.00 0.00 2.57
2287 2455 2.093500 TCGACATCCAACCCTCTCAATG 60.093 50.000 0.00 0.00 0.00 2.82
2288 2456 2.169352 CTCGACATCCAACCCTCTCAAT 59.831 50.000 0.00 0.00 0.00 2.57
2289 2457 1.550524 CTCGACATCCAACCCTCTCAA 59.449 52.381 0.00 0.00 0.00 3.02
2290 2458 1.186200 CTCGACATCCAACCCTCTCA 58.814 55.000 0.00 0.00 0.00 3.27
2291 2459 0.179097 GCTCGACATCCAACCCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
2292 2460 0.904865 TGCTCGACATCCAACCCTCT 60.905 55.000 0.00 0.00 0.00 3.69
2293 2461 0.460987 CTGCTCGACATCCAACCCTC 60.461 60.000 0.00 0.00 0.00 4.30
2294 2462 1.194781 ACTGCTCGACATCCAACCCT 61.195 55.000 0.00 0.00 0.00 4.34
2295 2463 1.021390 CACTGCTCGACATCCAACCC 61.021 60.000 0.00 0.00 0.00 4.11
2296 2464 1.021390 CCACTGCTCGACATCCAACC 61.021 60.000 0.00 0.00 0.00 3.77
2297 2465 1.639298 GCCACTGCTCGACATCCAAC 61.639 60.000 0.00 0.00 33.53 3.77
2298 2466 1.375908 GCCACTGCTCGACATCCAA 60.376 57.895 0.00 0.00 33.53 3.53
2299 2467 2.265739 GCCACTGCTCGACATCCA 59.734 61.111 0.00 0.00 33.53 3.41
2300 2468 2.512515 GGCCACTGCTCGACATCC 60.513 66.667 0.00 0.00 37.74 3.51
2301 2469 2.512515 GGGCCACTGCTCGACATC 60.513 66.667 4.39 0.00 37.74 3.06
2302 2470 3.005539 AGGGCCACTGCTCGACAT 61.006 61.111 6.18 0.00 45.20 3.06
2303 2471 4.007644 CAGGGCCACTGCTCGACA 62.008 66.667 6.18 0.00 45.20 4.35
2304 2472 4.767255 CCAGGGCCACTGCTCGAC 62.767 72.222 6.18 0.00 45.20 4.20
2307 2475 3.971702 AACCCAGGGCCACTGCTC 61.972 66.667 4.91 0.00 46.14 4.26
2308 2476 4.290622 CAACCCAGGGCCACTGCT 62.291 66.667 4.91 0.00 46.14 4.24
2311 2479 3.902112 CACCAACCCAGGGCCACT 61.902 66.667 4.91 0.00 0.00 4.00
2312 2480 3.224007 ATCACCAACCCAGGGCCAC 62.224 63.158 4.91 0.00 0.00 5.01
2313 2481 2.863484 ATCACCAACCCAGGGCCA 60.863 61.111 4.91 0.00 0.00 5.36
2314 2482 2.362889 CATCACCAACCCAGGGCC 60.363 66.667 4.91 0.00 0.00 5.80
2315 2483 0.831711 AAACATCACCAACCCAGGGC 60.832 55.000 4.91 0.00 0.00 5.19
2316 2484 1.344114 CAAAACATCACCAACCCAGGG 59.656 52.381 2.85 2.85 0.00 4.45
2317 2485 2.038659 ACAAAACATCACCAACCCAGG 58.961 47.619 0.00 0.00 0.00 4.45
2318 2486 2.430332 ACACAAAACATCACCAACCCAG 59.570 45.455 0.00 0.00 0.00 4.45
2319 2487 2.167281 CACACAAAACATCACCAACCCA 59.833 45.455 0.00 0.00 0.00 4.51
2320 2488 2.428890 TCACACAAAACATCACCAACCC 59.571 45.455 0.00 0.00 0.00 4.11
2321 2489 3.443976 GTCACACAAAACATCACCAACC 58.556 45.455 0.00 0.00 0.00 3.77
2322 2490 3.105203 CGTCACACAAAACATCACCAAC 58.895 45.455 0.00 0.00 0.00 3.77
2323 2491 3.010420 TCGTCACACAAAACATCACCAA 58.990 40.909 0.00 0.00 0.00 3.67
2324 2492 2.611751 CTCGTCACACAAAACATCACCA 59.388 45.455 0.00 0.00 0.00 4.17
2325 2493 2.032030 CCTCGTCACACAAAACATCACC 60.032 50.000 0.00 0.00 0.00 4.02
2326 2494 2.602217 GCCTCGTCACACAAAACATCAC 60.602 50.000 0.00 0.00 0.00 3.06
2327 2495 1.601903 GCCTCGTCACACAAAACATCA 59.398 47.619 0.00 0.00 0.00 3.07
2328 2496 1.398451 CGCCTCGTCACACAAAACATC 60.398 52.381 0.00 0.00 0.00 3.06
2329 2497 0.586319 CGCCTCGTCACACAAAACAT 59.414 50.000 0.00 0.00 0.00 2.71
2330 2498 1.433053 CCGCCTCGTCACACAAAACA 61.433 55.000 0.00 0.00 0.00 2.83
2331 2499 1.278637 CCGCCTCGTCACACAAAAC 59.721 57.895 0.00 0.00 0.00 2.43
2332 2500 2.539338 GCCGCCTCGTCACACAAAA 61.539 57.895 0.00 0.00 0.00 2.44
2333 2501 2.970324 GCCGCCTCGTCACACAAA 60.970 61.111 0.00 0.00 0.00 2.83
2348 2516 4.759205 ATGGTTCCCAAGGCCGCC 62.759 66.667 0.00 0.00 36.95 6.13
2349 2517 2.679996 AATGGTTCCCAAGGCCGC 60.680 61.111 0.00 0.00 36.95 6.53
2350 2518 3.005540 GCAATGGTTCCCAAGGCCG 62.006 63.158 0.00 0.00 36.95 6.13
2351 2519 1.891722 CTGCAATGGTTCCCAAGGCC 61.892 60.000 0.00 0.00 36.95 5.19
2352 2520 1.593265 CTGCAATGGTTCCCAAGGC 59.407 57.895 0.00 3.40 36.95 4.35
2353 2521 0.542702 ACCTGCAATGGTTCCCAAGG 60.543 55.000 0.00 0.00 36.95 3.61
2354 2522 2.094675 CTACCTGCAATGGTTCCCAAG 58.905 52.381 2.55 0.00 41.22 3.61
2355 2523 1.890573 GCTACCTGCAATGGTTCCCAA 60.891 52.381 2.55 0.00 41.22 4.12
2356 2524 0.323360 GCTACCTGCAATGGTTCCCA 60.323 55.000 2.55 0.00 41.22 4.37
2357 2525 2.493547 GCTACCTGCAATGGTTCCC 58.506 57.895 2.55 0.00 41.22 3.97
2367 2535 2.804933 GCCTCATAGAGTTGCTACCTGC 60.805 54.545 0.00 0.00 43.25 4.85
2368 2536 2.224161 GGCCTCATAGAGTTGCTACCTG 60.224 54.545 0.00 0.00 0.00 4.00
2369 2537 2.043227 GGCCTCATAGAGTTGCTACCT 58.957 52.381 0.00 0.00 0.00 3.08
2370 2538 1.269831 CGGCCTCATAGAGTTGCTACC 60.270 57.143 0.00 0.00 0.00 3.18
2371 2539 1.269831 CCGGCCTCATAGAGTTGCTAC 60.270 57.143 0.00 0.00 0.00 3.58
2372 2540 1.040646 CCGGCCTCATAGAGTTGCTA 58.959 55.000 0.00 0.00 0.00 3.49
2373 2541 1.826024 CCGGCCTCATAGAGTTGCT 59.174 57.895 0.00 0.00 0.00 3.91
2374 2542 1.889573 GCCGGCCTCATAGAGTTGC 60.890 63.158 18.11 0.00 0.00 4.17
2375 2543 1.592669 CGCCGGCCTCATAGAGTTG 60.593 63.158 23.46 0.00 0.00 3.16
2376 2544 2.797278 CCGCCGGCCTCATAGAGTT 61.797 63.158 23.46 0.00 0.00 3.01
2377 2545 3.227276 CCGCCGGCCTCATAGAGT 61.227 66.667 23.46 0.00 0.00 3.24
2378 2546 3.227276 ACCGCCGGCCTCATAGAG 61.227 66.667 23.46 3.38 0.00 2.43
2379 2547 3.536917 CACCGCCGGCCTCATAGA 61.537 66.667 23.46 0.00 0.00 1.98
2380 2548 3.792053 GACACCGCCGGCCTCATAG 62.792 68.421 23.46 5.12 0.00 2.23
2381 2549 3.845259 GACACCGCCGGCCTCATA 61.845 66.667 23.46 0.00 0.00 2.15
2387 2555 4.980805 TGTCAAGACACCGCCGGC 62.981 66.667 19.07 19.07 36.21 6.13
2388 2556 1.671054 ATTGTCAAGACACCGCCGG 60.671 57.895 0.00 0.00 41.67 6.13
2389 2557 1.497278 CATTGTCAAGACACCGCCG 59.503 57.895 1.73 0.00 41.67 6.46
2390 2558 1.875963 CCATTGTCAAGACACCGCC 59.124 57.895 1.73 0.00 41.67 6.13
2391 2559 1.210155 GCCATTGTCAAGACACCGC 59.790 57.895 1.73 1.42 41.67 5.68
2392 2560 1.069022 CAAGCCATTGTCAAGACACCG 60.069 52.381 1.73 0.00 41.67 4.94
2393 2561 1.336240 GCAAGCCATTGTCAAGACACC 60.336 52.381 1.73 0.00 41.67 4.16
2394 2562 1.610522 AGCAAGCCATTGTCAAGACAC 59.389 47.619 1.73 0.00 41.67 3.67
2395 2563 1.985473 AGCAAGCCATTGTCAAGACA 58.015 45.000 0.00 0.00 38.76 3.41
2396 2564 2.294233 TCAAGCAAGCCATTGTCAAGAC 59.706 45.455 0.00 0.00 38.76 3.01
2397 2565 2.294233 GTCAAGCAAGCCATTGTCAAGA 59.706 45.455 0.00 0.00 38.76 3.02
2398 2566 2.034939 TGTCAAGCAAGCCATTGTCAAG 59.965 45.455 0.00 0.00 38.76 3.02
2399 2567 2.030371 TGTCAAGCAAGCCATTGTCAA 58.970 42.857 0.00 0.00 38.76 3.18
2400 2568 1.689984 TGTCAAGCAAGCCATTGTCA 58.310 45.000 0.00 0.00 38.76 3.58
2401 2569 2.798976 TTGTCAAGCAAGCCATTGTC 57.201 45.000 0.00 0.00 38.76 3.18
2402 2570 3.069872 TGATTTGTCAAGCAAGCCATTGT 59.930 39.130 0.00 0.00 38.47 2.71
2403 2571 3.655486 TGATTTGTCAAGCAAGCCATTG 58.345 40.909 0.00 0.00 38.47 2.82
2404 2572 4.546829 ATGATTTGTCAAGCAAGCCATT 57.453 36.364 0.00 0.00 38.47 3.16
2405 2573 4.546829 AATGATTTGTCAAGCAAGCCAT 57.453 36.364 0.00 0.00 38.47 4.40
2406 2574 4.059511 CAAATGATTTGTCAAGCAAGCCA 58.940 39.130 9.67 0.00 38.47 4.75
2407 2575 3.120442 GCAAATGATTTGTCAAGCAAGCC 60.120 43.478 18.12 0.00 42.56 4.35
2408 2576 3.744426 AGCAAATGATTTGTCAAGCAAGC 59.256 39.130 18.12 1.88 42.56 4.01
2409 2577 4.377022 GCAGCAAATGATTTGTCAAGCAAG 60.377 41.667 18.12 3.35 42.56 4.01
2410 2578 3.495377 GCAGCAAATGATTTGTCAAGCAA 59.505 39.130 18.12 0.00 42.56 3.91
2411 2579 3.061322 GCAGCAAATGATTTGTCAAGCA 58.939 40.909 18.12 0.00 42.56 3.91
2412 2580 3.323243 AGCAGCAAATGATTTGTCAAGC 58.677 40.909 18.12 15.59 42.56 4.01
2413 2581 5.571741 CACTAGCAGCAAATGATTTGTCAAG 59.428 40.000 18.12 11.33 42.56 3.02
2414 2582 5.463286 CACTAGCAGCAAATGATTTGTCAA 58.537 37.500 18.12 1.28 42.56 3.18
2415 2583 4.616604 GCACTAGCAGCAAATGATTTGTCA 60.617 41.667 18.12 0.66 40.75 3.58
2416 2584 3.855950 GCACTAGCAGCAAATGATTTGTC 59.144 43.478 18.12 10.98 40.75 3.18
2417 2585 3.671433 CGCACTAGCAGCAAATGATTTGT 60.671 43.478 18.12 3.88 40.95 2.83
2418 2586 2.850060 CGCACTAGCAGCAAATGATTTG 59.150 45.455 13.32 13.32 42.27 2.32
2419 2587 2.159338 CCGCACTAGCAGCAAATGATTT 60.159 45.455 8.31 0.00 42.27 2.17
2420 2588 1.402968 CCGCACTAGCAGCAAATGATT 59.597 47.619 8.31 0.00 42.27 2.57
2421 2589 1.019673 CCGCACTAGCAGCAAATGAT 58.980 50.000 8.31 0.00 42.27 2.45
2422 2590 0.321564 ACCGCACTAGCAGCAAATGA 60.322 50.000 8.31 0.00 42.27 2.57
2423 2591 0.179181 CACCGCACTAGCAGCAAATG 60.179 55.000 8.31 0.00 42.27 2.32
2424 2592 1.308069 CCACCGCACTAGCAGCAAAT 61.308 55.000 8.31 0.00 42.27 2.32
2425 2593 1.965930 CCACCGCACTAGCAGCAAA 60.966 57.895 8.31 0.00 42.27 3.68
2426 2594 2.358615 CCACCGCACTAGCAGCAA 60.359 61.111 8.31 0.00 42.27 3.91
2427 2595 4.393155 CCCACCGCACTAGCAGCA 62.393 66.667 8.31 0.00 42.27 4.41
2429 2597 3.254024 AACCCCACCGCACTAGCAG 62.254 63.158 0.00 0.00 42.27 4.24
2430 2598 3.246112 AACCCCACCGCACTAGCA 61.246 61.111 0.00 0.00 42.27 3.49
2431 2599 2.436115 GAACCCCACCGCACTAGC 60.436 66.667 0.00 0.00 37.42 3.42
2432 2600 1.218316 GAGAACCCCACCGCACTAG 59.782 63.158 0.00 0.00 0.00 2.57
2433 2601 2.642254 CGAGAACCCCACCGCACTA 61.642 63.158 0.00 0.00 0.00 2.74
2434 2602 4.003788 CGAGAACCCCACCGCACT 62.004 66.667 0.00 0.00 0.00 4.40
2438 2606 4.452733 GAGCCGAGAACCCCACCG 62.453 72.222 0.00 0.00 0.00 4.94
2439 2607 4.452733 CGAGCCGAGAACCCCACC 62.453 72.222 0.00 0.00 0.00 4.61
2440 2608 4.452733 CCGAGCCGAGAACCCCAC 62.453 72.222 0.00 0.00 0.00 4.61
2442 2610 3.703127 AACCGAGCCGAGAACCCC 61.703 66.667 0.00 0.00 0.00 4.95
2443 2611 2.240162 ATCAACCGAGCCGAGAACCC 62.240 60.000 0.00 0.00 0.00 4.11
2444 2612 1.084370 CATCAACCGAGCCGAGAACC 61.084 60.000 0.00 0.00 0.00 3.62
2445 2613 1.696832 GCATCAACCGAGCCGAGAAC 61.697 60.000 0.00 0.00 0.00 3.01
2446 2614 1.447838 GCATCAACCGAGCCGAGAA 60.448 57.895 0.00 0.00 0.00 2.87
2447 2615 2.184322 GCATCAACCGAGCCGAGA 59.816 61.111 0.00 0.00 0.00 4.04
2448 2616 3.257561 CGCATCAACCGAGCCGAG 61.258 66.667 0.00 0.00 0.00 4.63
2452 2620 3.127533 AAGGCGCATCAACCGAGC 61.128 61.111 10.83 0.00 0.00 5.03
2453 2621 2.753966 CCAAGGCGCATCAACCGAG 61.754 63.158 10.83 0.00 0.00 4.63
2454 2622 2.745884 CCAAGGCGCATCAACCGA 60.746 61.111 10.83 0.00 0.00 4.69
2455 2623 2.745884 TCCAAGGCGCATCAACCG 60.746 61.111 10.83 0.00 0.00 4.44
2456 2624 2.409870 CCTCCAAGGCGCATCAACC 61.410 63.158 10.83 0.00 0.00 3.77
2457 2625 2.409870 CCCTCCAAGGCGCATCAAC 61.410 63.158 10.83 0.00 32.73 3.18
2458 2626 2.045045 CCCTCCAAGGCGCATCAA 60.045 61.111 10.83 0.00 32.73 2.57
2459 2627 4.113815 CCCCTCCAAGGCGCATCA 62.114 66.667 10.83 0.00 32.73 3.07
2460 2628 4.115199 ACCCCTCCAAGGCGCATC 62.115 66.667 10.83 0.00 32.73 3.91
2461 2629 4.431131 CACCCCTCCAAGGCGCAT 62.431 66.667 10.83 0.00 32.73 4.73
2464 2632 4.410400 GACCACCCCTCCAAGGCG 62.410 72.222 0.00 0.00 32.73 5.52
2465 2633 3.256960 TGACCACCCCTCCAAGGC 61.257 66.667 0.00 0.00 32.73 4.35
2466 2634 1.538876 TCTGACCACCCCTCCAAGG 60.539 63.158 0.00 0.00 34.30 3.61
2467 2635 0.838122 AGTCTGACCACCCCTCCAAG 60.838 60.000 3.76 0.00 0.00 3.61
2468 2636 0.490017 TAGTCTGACCACCCCTCCAA 59.510 55.000 3.76 0.00 0.00 3.53
2469 2637 0.716591 ATAGTCTGACCACCCCTCCA 59.283 55.000 3.76 0.00 0.00 3.86
2470 2638 2.769602 TATAGTCTGACCACCCCTCC 57.230 55.000 3.76 0.00 0.00 4.30
2471 2639 3.577919 ACATATAGTCTGACCACCCCTC 58.422 50.000 3.76 0.00 0.00 4.30
2472 2640 3.708236 ACATATAGTCTGACCACCCCT 57.292 47.619 3.76 0.00 0.00 4.79
2473 2641 3.709653 TCAACATATAGTCTGACCACCCC 59.290 47.826 3.76 0.00 0.00 4.95
2474 2642 4.649674 TCTCAACATATAGTCTGACCACCC 59.350 45.833 3.76 0.00 0.00 4.61
2475 2643 5.854010 TCTCAACATATAGTCTGACCACC 57.146 43.478 3.76 0.00 0.00 4.61
2476 2644 6.920758 GTCATCTCAACATATAGTCTGACCAC 59.079 42.308 3.76 0.00 0.00 4.16
2477 2645 6.040955 GGTCATCTCAACATATAGTCTGACCA 59.959 42.308 11.84 0.00 41.30 4.02
2478 2646 6.040955 TGGTCATCTCAACATATAGTCTGACC 59.959 42.308 3.76 10.21 41.61 4.02
2479 2647 6.920758 GTGGTCATCTCAACATATAGTCTGAC 59.079 42.308 0.00 0.00 0.00 3.51
2480 2648 6.040955 GGTGGTCATCTCAACATATAGTCTGA 59.959 42.308 0.00 0.00 0.00 3.27
2481 2649 6.183360 TGGTGGTCATCTCAACATATAGTCTG 60.183 42.308 0.00 0.00 0.00 3.51
2482 2650 5.899547 TGGTGGTCATCTCAACATATAGTCT 59.100 40.000 0.00 0.00 0.00 3.24
2483 2651 5.986135 GTGGTGGTCATCTCAACATATAGTC 59.014 44.000 0.00 0.00 34.10 2.59
2484 2652 5.451937 CGTGGTGGTCATCTCAACATATAGT 60.452 44.000 0.00 0.00 34.10 2.12
2485 2653 4.984785 CGTGGTGGTCATCTCAACATATAG 59.015 45.833 0.00 0.00 34.10 1.31
2486 2654 4.202212 CCGTGGTGGTCATCTCAACATATA 60.202 45.833 0.00 0.00 34.10 0.86
2487 2655 3.432186 CCGTGGTGGTCATCTCAACATAT 60.432 47.826 0.00 0.00 34.10 1.78
2488 2656 2.093711 CCGTGGTGGTCATCTCAACATA 60.094 50.000 0.00 0.00 34.10 2.29
2489 2657 1.339055 CCGTGGTGGTCATCTCAACAT 60.339 52.381 0.00 0.00 34.10 2.71
2490 2658 0.034756 CCGTGGTGGTCATCTCAACA 59.965 55.000 0.00 0.00 0.00 3.33
2491 2659 0.320374 TCCGTGGTGGTCATCTCAAC 59.680 55.000 0.00 0.00 39.52 3.18
2492 2660 1.066215 CATCCGTGGTGGTCATCTCAA 60.066 52.381 0.00 0.00 39.52 3.02
2493 2661 0.536724 CATCCGTGGTGGTCATCTCA 59.463 55.000 0.00 0.00 39.52 3.27
2494 2662 0.537188 ACATCCGTGGTGGTCATCTC 59.463 55.000 0.00 0.00 39.52 2.75
2495 2663 0.250234 CACATCCGTGGTGGTCATCT 59.750 55.000 0.00 0.00 39.64 2.90
2496 2664 1.610624 AACACATCCGTGGTGGTCATC 60.611 52.381 0.00 0.00 43.11 2.92
2497 2665 0.400213 AACACATCCGTGGTGGTCAT 59.600 50.000 0.00 0.00 43.11 3.06
2498 2666 1.833606 AACACATCCGTGGTGGTCA 59.166 52.632 0.00 0.00 43.11 4.02
2499 2667 4.792087 AACACATCCGTGGTGGTC 57.208 55.556 0.00 0.00 43.11 4.02
2503 2671 0.250295 CTCACCAACACATCCGTGGT 60.250 55.000 0.00 0.00 46.78 4.16
2506 2674 0.319555 CGTCTCACCAACACATCCGT 60.320 55.000 0.00 0.00 0.00 4.69
2507 2675 1.014044 CCGTCTCACCAACACATCCG 61.014 60.000 0.00 0.00 0.00 4.18
2508 2676 0.034896 ACCGTCTCACCAACACATCC 59.965 55.000 0.00 0.00 0.00 3.51
2509 2677 1.270094 TGACCGTCTCACCAACACATC 60.270 52.381 0.00 0.00 0.00 3.06
2510 2678 0.756294 TGACCGTCTCACCAACACAT 59.244 50.000 0.00 0.00 0.00 3.21
2511 2679 0.104120 CTGACCGTCTCACCAACACA 59.896 55.000 0.00 0.00 0.00 3.72
2512 2680 0.600255 CCTGACCGTCTCACCAACAC 60.600 60.000 0.00 0.00 0.00 3.32
2513 2681 1.745890 CCTGACCGTCTCACCAACA 59.254 57.895 0.00 0.00 0.00 3.33
2514 2682 1.004918 CCCTGACCGTCTCACCAAC 60.005 63.158 0.00 0.00 0.00 3.77
2515 2683 1.458777 ACCCTGACCGTCTCACCAA 60.459 57.895 0.00 0.00 0.00 3.67
2516 2684 1.906824 GACCCTGACCGTCTCACCA 60.907 63.158 0.00 0.00 0.00 4.17
2517 2685 1.606889 AGACCCTGACCGTCTCACC 60.607 63.158 0.00 0.00 35.68 4.02
2518 2686 1.179814 ACAGACCCTGACCGTCTCAC 61.180 60.000 0.00 0.00 38.54 3.51
2519 2687 0.402887 TACAGACCCTGACCGTCTCA 59.597 55.000 0.00 0.00 38.54 3.27
2520 2688 1.096416 CTACAGACCCTGACCGTCTC 58.904 60.000 0.00 0.00 38.54 3.36
2521 2689 0.323542 CCTACAGACCCTGACCGTCT 60.324 60.000 0.00 0.00 41.29 4.18
2522 2690 1.321074 CCCTACAGACCCTGACCGTC 61.321 65.000 0.45 0.00 35.18 4.79
2523 2691 1.305046 CCCTACAGACCCTGACCGT 60.305 63.158 0.45 0.00 35.18 4.83
2524 2692 2.722201 GCCCTACAGACCCTGACCG 61.722 68.421 0.45 0.00 35.18 4.79
2525 2693 2.722201 CGCCCTACAGACCCTGACC 61.722 68.421 0.45 0.00 35.18 4.02
2526 2694 1.946475 GACGCCCTACAGACCCTGAC 61.946 65.000 0.45 0.00 35.18 3.51
2527 2695 1.681327 GACGCCCTACAGACCCTGA 60.681 63.158 0.45 0.00 35.18 3.86
2528 2696 1.258445 AAGACGCCCTACAGACCCTG 61.258 60.000 0.00 0.00 37.52 4.45
2529 2697 0.971447 GAAGACGCCCTACAGACCCT 60.971 60.000 0.00 0.00 0.00 4.34
2530 2698 1.516423 GAAGACGCCCTACAGACCC 59.484 63.158 0.00 0.00 0.00 4.46
2531 2699 0.971447 AGGAAGACGCCCTACAGACC 60.971 60.000 0.00 0.00 30.92 3.85
2532 2700 0.896226 AAGGAAGACGCCCTACAGAC 59.104 55.000 0.00 0.00 32.77 3.51
2533 2701 0.895530 CAAGGAAGACGCCCTACAGA 59.104 55.000 0.00 0.00 32.77 3.41
2534 2702 0.108138 CCAAGGAAGACGCCCTACAG 60.108 60.000 0.00 0.00 32.77 2.74
2535 2703 1.550130 CCCAAGGAAGACGCCCTACA 61.550 60.000 0.00 0.00 32.77 2.74
2536 2704 1.221021 CCCAAGGAAGACGCCCTAC 59.779 63.158 0.00 0.00 32.77 3.18
2537 2705 1.993391 CCCCAAGGAAGACGCCCTA 60.993 63.158 0.00 0.00 32.77 3.53
2538 2706 3.330720 CCCCAAGGAAGACGCCCT 61.331 66.667 0.00 0.00 35.03 5.19
2539 2707 3.327404 TCCCCAAGGAAGACGCCC 61.327 66.667 0.00 0.00 40.08 6.13
2562 2730 2.826674 ATGTACCCAGGAACCATTGG 57.173 50.000 0.00 0.00 0.00 3.16
2563 2731 4.792068 ACATATGTACCCAGGAACCATTG 58.208 43.478 6.56 0.00 0.00 2.82
2564 2732 6.562608 AGATACATATGTACCCAGGAACCATT 59.437 38.462 17.69 0.00 32.72 3.16
2565 2733 6.091555 AGATACATATGTACCCAGGAACCAT 58.908 40.000 17.69 0.00 32.72 3.55
2566 2734 5.473273 AGATACATATGTACCCAGGAACCA 58.527 41.667 17.69 0.00 32.72 3.67
2567 2735 6.435292 AAGATACATATGTACCCAGGAACC 57.565 41.667 17.69 0.31 32.72 3.62
2570 2738 9.434275 CCATATAAGATACATATGTACCCAGGA 57.566 37.037 17.69 3.63 35.47 3.86
2571 2739 9.434275 TCCATATAAGATACATATGTACCCAGG 57.566 37.037 17.69 11.29 35.47 4.45
2646 2814 8.545420 CGCAAGTAAGTCAAGTTTACTCTAAAA 58.455 33.333 0.00 0.00 39.71 1.52
2647 2815 7.306983 GCGCAAGTAAGTCAAGTTTACTCTAAA 60.307 37.037 0.30 0.00 39.71 1.85
2648 2816 6.145048 GCGCAAGTAAGTCAAGTTTACTCTAA 59.855 38.462 0.30 0.00 39.71 2.10
2649 2817 5.632347 GCGCAAGTAAGTCAAGTTTACTCTA 59.368 40.000 0.30 0.00 39.71 2.43
2650 2818 4.448060 GCGCAAGTAAGTCAAGTTTACTCT 59.552 41.667 0.30 0.00 39.71 3.24
2651 2819 4.210537 TGCGCAAGTAAGTCAAGTTTACTC 59.789 41.667 8.16 0.00 39.71 2.59
2652 2820 4.025145 GTGCGCAAGTAAGTCAAGTTTACT 60.025 41.667 14.00 0.00 41.75 2.24
2653 2821 4.025145 AGTGCGCAAGTAAGTCAAGTTTAC 60.025 41.667 14.00 0.00 41.68 2.01
2654 2822 4.124238 AGTGCGCAAGTAAGTCAAGTTTA 58.876 39.130 14.00 0.00 41.68 2.01
2655 2823 2.943033 AGTGCGCAAGTAAGTCAAGTTT 59.057 40.909 14.00 0.00 41.68 2.66
2656 2824 2.561569 AGTGCGCAAGTAAGTCAAGTT 58.438 42.857 14.00 0.00 41.68 2.66
2657 2825 2.240493 AGTGCGCAAGTAAGTCAAGT 57.760 45.000 14.00 0.00 41.68 3.16
2658 2826 3.318017 ACTAGTGCGCAAGTAAGTCAAG 58.682 45.455 14.00 1.66 41.68 3.02
2659 2827 3.380479 ACTAGTGCGCAAGTAAGTCAA 57.620 42.857 14.00 0.00 41.68 3.18
2660 2828 4.713824 ATACTAGTGCGCAAGTAAGTCA 57.286 40.909 22.10 5.27 41.68 3.41
2661 2829 6.436261 TCATATACTAGTGCGCAAGTAAGTC 58.564 40.000 22.10 5.00 41.68 3.01
2662 2830 6.387041 TCATATACTAGTGCGCAAGTAAGT 57.613 37.500 22.10 19.00 41.68 2.24
2663 2831 7.875316 ATTCATATACTAGTGCGCAAGTAAG 57.125 36.000 22.10 15.76 41.68 2.34
2664 2832 8.657074 AAATTCATATACTAGTGCGCAAGTAA 57.343 30.769 22.10 13.54 41.68 2.24
2665 2833 8.657074 AAAATTCATATACTAGTGCGCAAGTA 57.343 30.769 20.91 20.91 41.68 2.24
2666 2834 7.279981 TGAAAATTCATATACTAGTGCGCAAGT 59.720 33.333 14.00 16.58 33.38 3.16
2667 2835 7.584123 GTGAAAATTCATATACTAGTGCGCAAG 59.416 37.037 14.00 10.16 39.73 4.01
2668 2836 7.065204 TGTGAAAATTCATATACTAGTGCGCAA 59.935 33.333 14.00 0.00 39.73 4.85
2669 2837 6.536941 TGTGAAAATTCATATACTAGTGCGCA 59.463 34.615 5.66 5.66 39.73 6.09
2670 2838 6.943981 TGTGAAAATTCATATACTAGTGCGC 58.056 36.000 5.39 0.00 39.73 6.09
2671 2839 9.767684 TTTTGTGAAAATTCATATACTAGTGCG 57.232 29.630 5.39 0.00 39.73 5.34
2701 2869 6.960320 TTCGCTGTGAAGTCAACGTAGTTTC 61.960 44.000 0.00 0.00 39.64 2.78
2702 2870 5.206474 TTCGCTGTGAAGTCAACGTAGTTT 61.206 41.667 0.00 0.00 39.64 2.66
2703 2871 3.735820 TTCGCTGTGAAGTCAACGTAGTT 60.736 43.478 0.00 0.00 41.40 2.24
2704 2872 2.223641 TTCGCTGTGAAGTCAACGTAGT 60.224 45.455 0.00 0.00 34.97 2.73
2705 2873 2.046283 TCGCTGTGAAGTCAACGTAG 57.954 50.000 0.00 0.00 0.00 3.51
2706 2874 2.495409 TTCGCTGTGAAGTCAACGTA 57.505 45.000 0.00 0.00 31.44 3.57
2707 2875 1.647346 TTTCGCTGTGAAGTCAACGT 58.353 45.000 3.65 0.00 37.99 3.99
2708 2876 2.730183 TTTTCGCTGTGAAGTCAACG 57.270 45.000 3.65 0.00 37.99 4.10
2709 2877 4.029043 GTCTTTTTCGCTGTGAAGTCAAC 58.971 43.478 3.65 0.00 37.99 3.18
2710 2878 3.687212 TGTCTTTTTCGCTGTGAAGTCAA 59.313 39.130 3.65 0.00 37.99 3.18
2711 2879 3.266636 TGTCTTTTTCGCTGTGAAGTCA 58.733 40.909 3.65 0.00 37.99 3.41
2712 2880 3.944422 TGTCTTTTTCGCTGTGAAGTC 57.056 42.857 3.65 0.00 37.99 3.01
2713 2881 4.695217 TTTGTCTTTTTCGCTGTGAAGT 57.305 36.364 3.65 0.00 37.99 3.01
2739 2907 9.060347 CATGAACAGTGACCTATAATAGCAAAT 57.940 33.333 0.00 0.00 0.00 2.32
2740 2908 7.012327 GCATGAACAGTGACCTATAATAGCAAA 59.988 37.037 0.00 0.00 0.00 3.68
2741 2909 6.483307 GCATGAACAGTGACCTATAATAGCAA 59.517 38.462 0.00 0.00 0.00 3.91
2742 2910 5.991606 GCATGAACAGTGACCTATAATAGCA 59.008 40.000 0.00 0.00 0.00 3.49
2743 2911 6.226787 AGCATGAACAGTGACCTATAATAGC 58.773 40.000 0.00 0.00 0.00 2.97
2744 2912 8.668510 AAAGCATGAACAGTGACCTATAATAG 57.331 34.615 0.00 0.00 0.00 1.73
2745 2913 9.461312 AAAAAGCATGAACAGTGACCTATAATA 57.539 29.630 0.00 0.00 0.00 0.98
2746 2914 7.944729 AAAAGCATGAACAGTGACCTATAAT 57.055 32.000 0.00 0.00 0.00 1.28
2747 2915 7.759489 AAAAAGCATGAACAGTGACCTATAA 57.241 32.000 0.00 0.00 0.00 0.98
2789 2957 9.942850 AATTCCTCTTTGACTTCTTTTCAAAAA 57.057 25.926 0.00 0.00 41.32 1.94
2790 2958 9.942850 AAATTCCTCTTTGACTTCTTTTCAAAA 57.057 25.926 0.00 0.00 41.32 2.44
2791 2959 9.942850 AAAATTCCTCTTTGACTTCTTTTCAAA 57.057 25.926 0.00 0.00 39.99 2.69
2801 2969 9.546428 CCAACAAAATAAAATTCCTCTTTGACT 57.454 29.630 8.96 0.00 0.00 3.41
2802 2970 9.541143 TCCAACAAAATAAAATTCCTCTTTGAC 57.459 29.630 8.96 0.00 0.00 3.18
2820 2988 9.669887 TGTACTAGTAAGAAAAGTTCCAACAAA 57.330 29.630 3.61 0.00 0.00 2.83
2821 2989 9.669887 TTGTACTAGTAAGAAAAGTTCCAACAA 57.330 29.630 3.61 0.00 0.00 2.83
2822 2990 9.841295 ATTGTACTAGTAAGAAAAGTTCCAACA 57.159 29.630 3.61 0.00 0.00 3.33
2824 2992 9.280174 CCATTGTACTAGTAAGAAAAGTTCCAA 57.720 33.333 3.61 1.24 0.00 3.53
2825 2993 8.653191 TCCATTGTACTAGTAAGAAAAGTTCCA 58.347 33.333 3.61 0.00 0.00 3.53
2826 2994 9.498176 TTCCATTGTACTAGTAAGAAAAGTTCC 57.502 33.333 3.61 0.00 0.00 3.62
2828 2996 9.503399 CCTTCCATTGTACTAGTAAGAAAAGTT 57.497 33.333 3.61 0.00 0.00 2.66
2829 2997 8.657712 ACCTTCCATTGTACTAGTAAGAAAAGT 58.342 33.333 3.61 2.14 0.00 2.66
2830 2998 9.152595 GACCTTCCATTGTACTAGTAAGAAAAG 57.847 37.037 3.61 4.51 0.00 2.27
2831 2999 8.653191 TGACCTTCCATTGTACTAGTAAGAAAA 58.347 33.333 3.61 0.00 0.00 2.29
2832 3000 8.197592 TGACCTTCCATTGTACTAGTAAGAAA 57.802 34.615 3.61 0.45 0.00 2.52
2833 3001 7.786046 TGACCTTCCATTGTACTAGTAAGAA 57.214 36.000 3.61 1.15 0.00 2.52
2834 3002 7.453752 ACTTGACCTTCCATTGTACTAGTAAGA 59.546 37.037 3.61 0.00 0.00 2.10
2835 3003 7.612677 ACTTGACCTTCCATTGTACTAGTAAG 58.387 38.462 3.61 0.00 0.00 2.34
2836 3004 7.549147 ACTTGACCTTCCATTGTACTAGTAA 57.451 36.000 3.61 0.00 0.00 2.24
2837 3005 7.549147 AACTTGACCTTCCATTGTACTAGTA 57.451 36.000 0.00 0.00 0.00 1.82
2838 3006 6.435292 AACTTGACCTTCCATTGTACTAGT 57.565 37.500 0.00 0.00 0.00 2.57
2839 3007 7.745620 AAAACTTGACCTTCCATTGTACTAG 57.254 36.000 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.