>input_sequence_66037
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-----------------------------AGCCTTGAGCCTTGTCTGGTG----CTTGTAGAGAGGAGTAGAGCCATGGA
GTCTGACACGATCCATGCACCCGCCACCTCCTCTTCCTCCTCCTACTCATCCGACTCGGCTGTCATCAATGGCGCACAGG
ACGTTTCCAAGGGTGAGCCCAAGCATCTGAAGCGCAAGAGACAGACCGCCACCTCTCCTGCTGCTCCAGCCACCGGCAGC
CAAGAGGCGGAGTCTGCCGACGGCGCCTCCCGGGGTGAGGAGAGCAGCAGCTGCGCCGCCGCCGCGGACGAGCGCACGGC
CGGAAGGCACCCGTCGTACCGCGGCGTGCGGCGCCGGAGCTGGGGCAAGTGGGTGTCGGAGATCCGAGAGCCGCGCAAGA
AGTCGCGCATCTGGCTCGGCACCTTCCCGACCGCGGAGATGGCCGCGCGCGCGCACGACGTCGCCGCGGTCGCCATCAAG
GGCCACCGCGCGCACCTCAACTTCCCGCACCTCGCCGACGCGCTCCCACGCCCGGCGTCCACCTCCCCCGCCGACATCCA
GGCCGCGGCCGCCCTGGCCGCCGCCCAATGCGAGCCTCCCTCCTCCGTCGCCGAGACCACGGAGACGCCGACGACGTCGA
CCGAGACATCGGCCGCGAGCTCCGGTACGGCCGGCTGCGGCGAGGAGAACGCTCTGTTCGACCTGCCCGACCTTCTGCTG
GACCTGAGGGACGGCCTCTGGTGCTCGCCTACCTGGGCGACGGCCGCCGACGAGTACGACGGCGGCGAGGCCGCGCTGCA
TGAGCCGCTGCTGTGGGTGGAGCAGTGCTGGACCTAGCCGCTCCGTTGTGACGCGCGGGCCATGCCTGGCCAGAAGAGAA
CACCCGTAGACATGGGCATGTACACTAGCGTTTCATTTTTCCAATTAA--------------------------------
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>chr6A_1_TraesCS6A01G250900
GTTGGCCTATTGCCTACTCTGTCGTGTACCAGCAGTATTATTTTGGAGCCGAGACCTTGATATTTCAGACTTGGTTGGGT
GAATTGGTCGTGTGTGTGCTGTTGCATTTTCCATGACGAAATCATCATATAGCATTA------TTATTTAATCTTTGTGC
TGCTCAGCAACTTGAGGCCTTCCTATTTGTATCAGATCTGTCAGTCAGGATCGTTGTATGACTGGAACGTGTTAATGGAA
TTTAC-TCTTGTTAATGGCTCGATGGCATCTGGGCACCAATAGTAAAGCGAAGACTTTGTGGAAACTGCCAGGCGCAGGA
CGCACCACCGTTCCT----GGCTGTTGCTTCCGGGTCTTGCTCACCAGTCACCACGGCCGGTGCGGCATTGCCGTTCGCA
TATCGTTGTTCCCGAAATCCTTGAGTT-----------------------------------------------------
----------------------------------------------------------------GTACCGGCAAGCAGCT
CAGTCCCGCGCAAGTGGGCACACGGAACAGTAACCACCACCTCCCTGCAGGAAGGTGTTGAACTAAGCAGCCCGATTGAT
TGAAGGAGTCTTGCTCTCGATGAC-ATCTACTTAACGGCTAGTTGTTGAGGTGTAGTCCTCGTCTCTGAGCACGACAGCT
GCCTCTTCCAAACTCGCGTGGCCGTGTGTATCTTATGTTGTAAAATAAAACAACAACAACTAGAAGAAGAAAATTATCGT
TTGGCCGGACTGCATATTATGCTTCCTATACAACTGGAGTTCTGAATTGGCCTGGTG------------------GCATT
TGGACGGTCGCTGTATGGTTATGTCTACTATAGCGTTATACCAATGCAAGCCATCCATGTGTTGGTGGTCTCACCAGCTT
GCAAATATCTAACTGGCTGCAGAATTTCGCGCGGATTTGTTAATTCCGGAGATCCTAACAACACCATCAGCTTTATTTCT
TTTTTAGCTCCGCATGGTGACGATATCTTTTGTTTAGAGAAAAAATAAAACGTAGGCCTCCATAAGA-AATCCACTATTT
ATAGTCGCGCG-CACCACCTTCCCTCCCCAGCCTTGAGCCTTGTCTGGTG----CTTGTAGAGAGGAGTAGAGCCATGGA
GTCTGACACGATCCATGCACCCGCCACCTCCTCTTCCTCCTCCTACTCATCCGACTCGGCTGTCATCAATGGCGCACAGG
ACGTTTCCAAGGGTGAGCCCAAGCATCTGAAGCGCAAGAGACAGACCGCCACCTCTCCTGCTGCTCCAGCCACCGGCAGC
CAAGAGGCGGAGTCTGCCGACGGCGCCTCCCGGGGTGAGGAGAGCAGCAGCTGCGCCGCCGCCGCGGACGAGCGCACGGC
CGGAAGGCACCCGTCGTACCGCGGCGTGCGGCGCCGGAGCTGGGGCAAGTGGGTGTCGGAGATCCGAGAGCCGCGCAAGA
AGTCGCGCATCTGGCTCGGCACCTTCCCGACCGCGGAGATGGCCGCGCGCGCGCACGACGTCGCCGCGGTCGCCATCAAG
GGCCACCGCGCGCACCTCAACTTCCCGCACCTCGCCGACGCGCTCCCACGCCCGGCGTCCACCTCCCCCGCCGACATCCA
GGCCGCGGCCGCCCTGGCCGCCGCCCAATGCGAGCCTCCCTCCTCCGTCGCCGAGACCACGGAGACGCCGACGACGTCGA
CCGAGACATCGGCCGCGAGCTCCGGTACGGCCGGCTGCGGCGAGGAGAACGCTCTGTTCGACCTGCCCGACCTTCTGCTG
GACCTGAGGGACGGCCTCTGGTGCTCGCCTACCTGGGCGACGGCCGCCGACGAGTACGACGGCGGCGAGGCCGCGCTGCA
TGAGCCGCTGCTGTGGGTGGAGCAGTGCTGGACCTAGCCGCTCCGTTGTGACGCGCGGGCCATGCCTGGCCAGAAGAGAA
CACCCGTAGACATGGGCATGTACACTAGCGTTTCATTTTTCCAATTAATTTGCGCTTTTGCTTCGCGCCATGCCAGGCCT
GTCATCTTGGGGTGGCAAGTCGTTTTAGCTAGACATTTCACCGTTTTGTTCACGGTGTGTACTGTATCCCGAAATGTGAA
ATCCAAACCTCTCAAAAAAGAAAAGAAGTGAAGGAAATACGAAATACCCCCTCTAAACTTTTATAGTGACCTAAAACATC
TTATAAAAGTTTACAGAGGGAGCACAATCTACTTCCTCGGTCTCGAAGTCTCAAACACTCGATCAATA-------ATAAT
GTCCTTATGTTCAAGAAAGGTATATTTCCACACTGT-------AATCCTTCCTTTGGTTTTAACAACTGAACTACACATT
CGCCAGCACAATCACCTATCAATTCGAGGTTACGAAAGCAGTGAAGCCCCCTCTCATTGAGAGGGTTGGATGTCGAGCAG
TGGCCCTGGGTTGGTGATGTTTTGTGTGACGAGGCGGCGGCCTTGGGAACCATTGCAGGTAGCAACTCTATGAGGCCGGC
GGTGTCTTGACAATGGCTTGCTTGACAAATCATTTGCTGCTAGTGCGGTGGGGTTCTCGGCTCGGTTGATGCGCCTTGGA
GGGGTGGTCAGACTATATGTTGAGATGACCACCACGGATGTGTTGGTGAGACGGTCAGGGTCTGTAGGGCGTCTTCCTTG
GGGAAATACCCAATGGTTCCTGGGTACATATGTATCTTATATGGAGAATTTTTTTAATGATTAAACAAAAAGTCAAAATA
GTTAAGAAACTATTTTTAGAGTAAACTTGACTTACTTGCGCACTAGTATATGAATTTTCACAAAAAAAGAAACTACGTTG
ACTTCACAGCGAAAAAGACAAAAAATATTTGCTATTATAGGTCACTGTTCATGCTTTTTTGACTGAAAATTTGTCTTTTT
TGAAAAGAAGTCAAAGAGGAATTTTATTTTGTTGGAACTTTTCTTACTAGTACAATGGAAGGTCAAGTTTTTTTTCAAAA
ATATTTTTAGAAATTTTTGACT
>chr6D_1
GTTGGCCTATTGCCTACTCTGTCGTGTACCAGCAGTATTATTTTGGAGCCCAGA-CTTGATATTTCAGACTTGGTTGGGT
GAATTGGTCGTGTGTGTGCTGGTGCATTTTCCATTATTG-----------------------TTTATTTAATCTTTGTAC
CGCTCAGCAACTTGAGGCATTCCTATTTGTATCAGATCTGTCAGTCAGGGTCGTTGTATGACTGGAACGTGTTAATGGAA
CTTAC-TCTTGTTAATGGCTCGATGGCATCTCGGCACCAATAGTAAAGCGAAGACTTTGAGGAAATTGCCAGGCGCACGA
CGCACCACCGTTCCTCACGGGCTCTTGCTTCCGGGTCTTGC-------TCACCACGGCCGGTGCGGCATTGCCGTTCGAA
TATCGTTGTTCCCGAAATCCTTGAGTT-----------------------------------------------------
----------------------------------------------------------------GTACCGGCAAGCAGCT
CAGTCCCGCGCAAGTGGGCACACGAAACAGTAACCACCACCTTCCTGCAGGAAGGTGTAGAACCAAGCAGCCCGATTGAT
TGAAGGAGTCTTGCTCTCGATGAC-ATCTACTTAACAGCTAGTTGTTGAGGTGTAGTCCTCGTCTCTGAGGAGGACGGCT
GCCTCCTCCAAACTCGCGTGGCCGTGTGTATGTTGTGTTGTAAAATAAAACAACAACAA---GAAGAAGAAAATTATCAT
TTGGCCGGACTGCATAT---GCTTCTTATACAACTGGAGTTCTGAATTGGCCCGGTG------------------GTATT
TGGACGGTCGCTGTTTGGTTATGTCTAGTATAGCGTC--ACCAATGCAAGCCATCCATGTGTTGGTGGTCTCACCAGCTT
GCAAATATCTAACTGGCTGCAGAATTTCGCGCCGATTTGTTAATTCCGGAGATCCTAACAACAACATCAGCTTTATTTAT
TTTTTAGCTCCGCATGGTGGCGATATCTTTTGTTTAGGG-AAAAATAAAACGTAGGCTTCCACTAACCAATCCACTATTT
ATAGTCGCGCCACACCACCTTCTTTCCCCAGCCTTGAGCCTTGTCTGGTG----CTTGTAGAGAGGACTAGAGCCATGGA
GTCTGACGCGACCCATGCACCCGCCACCTCCTCTTCCTCCTCCTACTCTTCCGACTCAGCCGTCATCAATGGCGTACAGG
ACGTGTCCAAGAGTGAGCCCAAGCATCTGAAGCGCAAGAGACAGACCGCCACCTCTCCTGTTGCTCCAGCCACCGGCAGC
CAAGAGACGGAGGGTGCCGACGGCGCCGCCCGGGCCGAGGAGAGCAGCAGCTGC---GCCGCCGGGGAGGAGCGCACGGC
CGGAAGGCACCCGTCGTACCGCGGCGTGCGTCGCCGGAGCTGGGGCAAGTGGGTGTCGGAGATCCGAGAGCCGCGCAAGA
AGTCGCGCATCTGGCTCGGCACCTTCCCGACCGCGGAGATGGCCGCGCGCGCGCACGACGTGGCCGCGGTCGCCATCAAG
GGCCGCCGCGCGCACCTCAACTTCCCGCACCTCGCCGACGCGCTCCCACGTCCGGCCTCCACTTCCCCCGCCGACATCCA
GGCCGCGGCCGCCCTGGCCGCTGCCCAATGCGAGCCTTCCTCCTCCGTCGCCGAGACCACGGAGACGCCGACGACATCGA
CGGAGACATCGGCCGCAAGCTCCGGTACGGCCGTTAGCGGCGAGGAGAACGCTCTGTTCGACCTGCCCGACCTTCTGCTC
GACCTGAGGGACGGCCTCTGGTGCTCGCGTACCTGGGCGACGGCCGCCGACGACTACGACGGCGGCGAAGCCGCGCTGCA
CGAGCCGCTCCTGTGGGTGGAGCAGTGCTGGACCTAGCCGTTCCGTTCCGACGCGTGGGCCATGCCTGGCCAGAAGAGAA
CACCCGTAGACATGGGCATGTA--CTAGCGTTTCATTTTTCCAATTACTTTGCGCTTTTGCTTCGCGCCATGCCAGGCCT
GCCATCTTGGGGTGGCAAGTCGTTCTAGCTAGACGTTTCACCGTTTTCTTCACGGTGTGTGTTGTATCCCGAAATGTGAA
ATACAGACCCCTCAAAAAGGGAG--AAAAAAAGGAAATATGAAATAACCCCTCTAAACTTTATAAGACGTTTTAGGTTAC
TACTCCAAGGGAGT---------ACAATCTATATCTTCGGTCTTGAAATCTCAAACACTCGATTAATCATGAACGATATT
GTCCTTTTGTTCAGCAAAGGTATATTTGATATTTCCACACTGCAATCCTTCCTTTGGTTTTAACAACTGAACTACACATT
CG------------------------------------------------------------------------------
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>chr6B_1
GTTGGCCTATTGCCTACTGTGTCGTGTACTAGCAGTATTATTTTGGAGCCCAGACTTTGATATTTCAGACTTGGTTGGGT
GAGTTGGTCGTGTGTGTGCTGGTGCATTTTCCATGACGAAACCATCGTAGCATTATTATTCATTTATTTAATCTTTGTGC
TGCTCAGCAACTTGAGGCATTCCTATTTGTATCAGATCTGTCAGTCAGGGTCGTTTTTTGACTGGAACGTGTTAATGGAA
TTTTATTCTTGTTAATGGCTCGATGGCATCTCGGCACCAATAGTAAAGCGAGGACTTTGTGGAAATTGCCAGGCGCACGA
CGCGCCACCGTTC----CGGGCTCTTGCTTCCGGGTCTTGC-------TTACCAAGGCCGGTGCGGCATTGCCGTTCGCA
TATCGTTGTTCCCGAAATCGTACTCCCTCCGTTCCGAATTAGTTGTCTTGGATTTGTCTAGATACGGATGTATCTAGACT
CATTTTAGTGCTAGATACCTCCGTATCTAGACAAATCTAAGACAAGTAATTCAGAACGGAGGGAGTACCAGCAAGCAGCT
CAGTCCCACGCAAGTGGGCACACGAAACAGTAACCACCACCTTCCTACAGGAAGGTGTTGAACCAAGCAGCCCGATTGAT
TGAAGGAGTCTTGCTCCCAGTGACAATCTACTTAACGGCTAGTTGTTGAGGTGTAGTCCTCGTCTCTGAGGAGGACAGCT
GCCTCCTCCAAACTCGCGTGGCCGTGTGTATGTTATGTCGTAAAATAAAACAACAGC------AAGAAGAAAATTATCAT
TTGGCCGGACTGCATAT---GCTTCTTATACAACTGGAGTTCTGAGTTAGGTAATACGAGTAGAAGTAATTGGTAGCATT
TGGACGGTCGCTGGTTGGTTATGTCTACTATAGCGT--TACCAATGCAAGCCATCCATGTGTTGGTGGTCTCACCAGCTT
GCAAATATCTAACTGGCCGCAGAATTTCGCGCAGATTTGTTAATTCGGGAGATCCTAACAACAACATCAGCTTTATTTCT
TTTTTAGCTCCGCATGGTGGCGATATCTTTTGTTTAGAG--AAAATAAAACGTAGGCTTCCACTAACAGATCCACTATTT
ATAGTCGCGCG-CACCACCTTCCCTCCCCAGCCTGGAGCCTTGTCTGGTGCTCCCTTGTAGAGAGGACTAGAGCCATGGA
GTCTGACACGATCCATGCACCCGCCACCTCCTCTTCCTCCTCCTACTCCTCCGATTCGACTGCCATCAATGGCGTACACG
ACGTGTCCAAGAGTGAGCCCAAGCATCTGAAGCGCAAGAGACAAACCGCCACTTCTCCTGCTGCTCCTGGCACCGGCAGC
CAAGAGGCGGAG---------------GCCCGGGCCGAGGAGAGCAGCAGCTGCACCGCCGCCGCGGACGAGCGCACGGC
CGGAAGGCACCCGTCGTACCGCGGCGTGCGTCGCCGGAGCTGGGGCAAGTGGGTGTCGGAGATCCGAGAGCCGCGCAAGA
AGTCGCGCATCTGGCTCGGCACCTTCCCGACCGCGGAGATGGCCGCGCGCGCGCACGACGTGGCCGCGGTCGCCATCAAG
GGCCGCCGCGCGCACCTCAACTTCCCGCACCTCGCCGACGCGCTCCCCCGTCCGGCGTCCACCTCCCCGGCCGACATCCA
GGCCGCGGCCGCCTCGGCCGCCGCCCAATGCGAGTCTTCTTCCTCCGTCGCCGAGACAACAGAGACGCCGACGACATCGA
CCGAGACATCGGCCGCAAGCTCCGGTACGGCCGGCAGCGTCGAGGAGAACGCTCTGTTCGACCTGCCCGACCTTCTGCTG
GACCTGAGGGACGGCCTCTGGTGCTCGCCTACCTGGGCGACGGCTGCCGACGACTACGACGGCGGCGAAGCCGCGCTGCA
CGAGCCGCTCCTGTGGGTGGAGCAGTGCTGGACCTAGCCGTTCCGTTGTGACGCGCGGGCCATGCCTGGCCAGAAGAGAA
CACCCGTAGTCATGGGCATGCA--CTAGCATTTCATTTTTCCAATTACTTTGCGCGTTTGTTTCGCGTCATGCCAGGCCT
GTCATCTTGGGGTGGCAAGTCGTTTTAGCTAGACATTTCACCGTTTTGTTCACGGTGTGTGTTGTATCCCGAGATGTGAA
ATACAGACCCCTCAAAAAGGGAGGAAAAAAAAGCAAATATGAAATACCCTCTCTAAACTTTTCTA---------------
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>SNPs
--------------------------------------------------S-----------------------------
---------------------S-------------------S----S--SSSSSS-S-----------------------
------------------S------------------------------S------------------------------
-------------------------------S---------------------------------S-----------S--
-----------------------S-----------------SSSSSSS--------------------------------
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------------------------S-----------------S--------------------S----------------
----------------------------------------------------------------------S-S-------
-----S-------------------------S---------------------------SSS----------------S-
-----------------SSS-----S--------------------------S---------------------------
--------------S---------------------SS------------------------------------------
--------------------------------S------------------------------S----------------
-------------------S-------------------S-----------------S----SS-SS-------------
-------------------------------------------------------------------S------------
------------------------------------------------S-------------------------S-----
----S------S--------------------------------------------------------------------
------------SS-------------S------SS------------------S-------------------------
------------------------------S-------------------------------------------------
-------------------------------------------------------------S------------------
----S---------------------------------------------S-----------------------------
-------------------------------------S-------------------------------------S----
----------------S------------------S--------------------------------------------
-----------------------------------------------------S--------------S-----------
S--------S------------------------------S---------------------------------------
----------------------SS-----------------------S--------------------------------
------------------------------------------------------------SS------------------
--S--S---S--------S-S-SSS--SSS---------S----------------------S---SSSSS-S-SSSSS-
-SS-SS---SSSSSSSSSSSSSS--------SS--S-------S---S---------------S---S----------S-
------S------SS------------SSSSSS-SS--------------------------------------------
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS
>forward_102
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--ATTGGTCGTGTGTGTGCTGT----------------------------------------------------------
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>reverse_1275
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--------------------------------------------------------------------------CACAGG
ACGTTTCCAAGGGT------------------------------------------------------------------
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>forward_895
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---------------------------------------------------------------------------GCATT
TGGACGGTCGCTGTA-----------------------------------------------------------------
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>reverse_2658
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-----------------TGTTGAGATGACCACCACGG-------------------------------------------
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