Multiple sequence alignment - TraesCS6A01G095000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G095000 chr6A 100.000 3407 0 0 1 3407 61668564 61671970 0.000000e+00 6292.0
1 TraesCS6A01G095000 chr6D 91.693 1264 52 18 969 2210 53607939 53606707 0.000000e+00 1703.0
2 TraesCS6A01G095000 chr6D 82.004 489 67 16 2210 2691 53606670 53606196 2.460000e-106 396.0
3 TraesCS6A01G095000 chr6D 92.537 201 15 0 3201 3401 53605353 53605153 4.300000e-74 289.0
4 TraesCS6A01G095000 chr6D 91.597 119 9 1 3034 3152 53605486 53605369 2.720000e-36 163.0
5 TraesCS6A01G095000 chr6B 87.215 1533 119 34 532 2028 117862413 117863904 0.000000e+00 1674.0
6 TraesCS6A01G095000 chr5B 83.770 191 20 9 2834 3017 570381318 570381132 1.630000e-38 171.0
7 TraesCS6A01G095000 chr3B 82.979 188 28 4 2833 3018 655842550 655842365 2.100000e-37 167.0
8 TraesCS6A01G095000 chr5D 82.199 191 28 5 2302 2487 421543873 421543684 3.520000e-35 159.0
9 TraesCS6A01G095000 chr5D 86.207 145 18 2 2876 3018 455601584 455601440 4.550000e-34 156.0
10 TraesCS6A01G095000 chr5D 86.111 144 18 2 2876 3017 454831926 454831783 1.640000e-33 154.0
11 TraesCS6A01G095000 chr2D 86.395 147 16 4 2873 3017 400302562 400302706 1.270000e-34 158.0
12 TraesCS6A01G095000 chr4D 84.828 145 20 2 2876 3018 505386325 505386469 9.850000e-31 145.0
13 TraesCS6A01G095000 chr4D 82.979 94 11 3 2369 2457 459300672 459300765 2.820000e-11 80.5
14 TraesCS6A01G095000 chr2B 80.513 195 28 8 2823 3010 671750434 671750243 1.270000e-29 141.0
15 TraesCS6A01G095000 chr5A 86.154 130 17 1 2890 3018 572159518 572159389 4.580000e-29 139.0
16 TraesCS6A01G095000 chr5A 86.614 127 14 3 2894 3018 546664615 546664490 1.650000e-28 137.0
17 TraesCS6A01G095000 chr5A 80.357 112 19 3 2348 2457 535145368 535145258 7.840000e-12 82.4
18 TraesCS6A01G095000 chr4A 79.091 220 32 8 2318 2528 552458930 552458716 4.580000e-29 139.0
19 TraesCS6A01G095000 chr7D 83.571 140 22 1 2879 3017 4906439 4906578 2.760000e-26 130.0
20 TraesCS6A01G095000 chr1B 84.416 77 9 2 2318 2393 61055085 61055011 4.720000e-09 73.1
21 TraesCS6A01G095000 chr7B 88.679 53 6 0 255 307 504485597 504485545 7.890000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G095000 chr6A 61668564 61671970 3406 False 6292.00 6292 100.00000 1 3407 1 chr6A.!!$F1 3406
1 TraesCS6A01G095000 chr6D 53605153 53607939 2786 True 637.75 1703 89.45775 969 3401 4 chr6D.!!$R1 2432
2 TraesCS6A01G095000 chr6B 117862413 117863904 1491 False 1674.00 1674 87.21500 532 2028 1 chr6B.!!$F1 1496

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
955 981 0.030504 CACTTGCATGCCGTCAACAA 59.969 50.0 16.68 0.0 0.0 2.83 F
2044 2096 0.103937 GATCTTCGTCAGGGGAGCTG 59.896 60.0 0.00 0.0 0.0 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2203 2261 0.178068 ATCGACGCCAGGCAAAGTAT 59.822 50.0 13.3 0.0 0.0 2.12 R
3377 3846 0.605319 TCACACGGGGTTTCATGCTC 60.605 55.0 0.0 0.0 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
32 33 2.959071 GAGCTGCTCGACGATGGC 60.959 66.667 14.68 0.00 0.00 4.40
33 34 3.423162 GAGCTGCTCGACGATGGCT 62.423 63.158 14.68 15.64 0.00 4.75
34 35 3.260483 GCTGCTCGACGATGGCTG 61.260 66.667 10.04 10.22 0.00 4.85
35 36 2.491621 CTGCTCGACGATGGCTGA 59.508 61.111 10.04 0.00 0.00 4.26
36 37 1.588403 CTGCTCGACGATGGCTGAG 60.588 63.158 10.04 0.00 0.00 3.35
37 38 2.959071 GCTCGACGATGGCTGAGC 60.959 66.667 0.00 0.00 45.95 4.26
47 48 4.593864 GGCTGAGCCCGATCGACC 62.594 72.222 18.66 6.78 44.06 4.79
48 49 4.933064 GCTGAGCCCGATCGACCG 62.933 72.222 18.66 4.49 0.00 4.79
56 57 4.266070 CGATCGACCGGCGGATGT 62.266 66.667 35.78 10.92 41.33 3.06
57 58 2.658593 GATCGACCGGCGGATGTG 60.659 66.667 35.78 18.29 41.33 3.21
58 59 4.221422 ATCGACCGGCGGATGTGG 62.221 66.667 35.78 12.22 41.33 4.17
60 61 4.752879 CGACCGGCGGATGTGGTT 62.753 66.667 35.78 8.07 35.75 3.67
61 62 3.124921 GACCGGCGGATGTGGTTG 61.125 66.667 35.78 2.05 35.75 3.77
85 86 3.980989 CGGTCGGTTGACGGGTGA 61.981 66.667 0.00 0.00 46.49 4.02
86 87 2.660802 GGTCGGTTGACGGGTGAT 59.339 61.111 0.00 0.00 46.49 3.06
87 88 1.892338 GGTCGGTTGACGGGTGATA 59.108 57.895 0.00 0.00 46.49 2.15
88 89 0.179119 GGTCGGTTGACGGGTGATAG 60.179 60.000 0.00 0.00 46.49 2.08
89 90 0.179119 GTCGGTTGACGGGTGATAGG 60.179 60.000 0.00 0.00 44.45 2.57
90 91 1.520787 CGGTTGACGGGTGATAGGC 60.521 63.158 0.00 0.00 39.42 3.93
91 92 1.600107 GGTTGACGGGTGATAGGCA 59.400 57.895 0.00 0.00 0.00 4.75
92 93 0.035820 GGTTGACGGGTGATAGGCAA 60.036 55.000 0.00 0.00 32.15 4.52
93 94 1.612199 GGTTGACGGGTGATAGGCAAA 60.612 52.381 0.00 0.00 37.09 3.68
94 95 1.467342 GTTGACGGGTGATAGGCAAAC 59.533 52.381 0.00 0.00 37.09 2.93
95 96 0.390603 TGACGGGTGATAGGCAAACG 60.391 55.000 0.00 0.00 35.01 3.60
96 97 1.702491 GACGGGTGATAGGCAAACGC 61.702 60.000 0.00 0.00 32.94 4.84
116 117 0.671251 CGAGAGGAGCAGGACATACC 59.329 60.000 0.00 0.00 39.35 2.73
117 118 0.671251 GAGAGGAGCAGGACATACCG 59.329 60.000 0.00 0.00 44.74 4.02
118 119 1.068250 GAGGAGCAGGACATACCGC 59.932 63.158 0.00 0.00 44.74 5.68
119 120 2.109181 GGAGCAGGACATACCGCC 59.891 66.667 0.00 0.00 44.74 6.13
120 121 2.731571 GGAGCAGGACATACCGCCA 61.732 63.158 0.00 0.00 44.74 5.69
121 122 1.227380 GAGCAGGACATACCGCCAG 60.227 63.158 0.00 0.00 44.74 4.85
122 123 2.203070 GCAGGACATACCGCCAGG 60.203 66.667 0.00 0.00 44.74 4.45
123 124 2.203070 CAGGACATACCGCCAGGC 60.203 66.667 0.00 0.00 44.74 4.85
142 143 3.660621 GCGCAGAGCTTTTGAGGT 58.339 55.556 0.30 0.00 44.04 3.85
143 144 1.208614 GCGCAGAGCTTTTGAGGTG 59.791 57.895 0.30 0.00 44.04 4.00
144 145 1.871772 CGCAGAGCTTTTGAGGTGG 59.128 57.895 3.58 0.00 0.00 4.61
145 146 0.603707 CGCAGAGCTTTTGAGGTGGA 60.604 55.000 3.58 0.00 0.00 4.02
146 147 1.831580 GCAGAGCTTTTGAGGTGGAT 58.168 50.000 3.58 0.00 0.00 3.41
147 148 1.471684 GCAGAGCTTTTGAGGTGGATG 59.528 52.381 3.58 0.00 0.00 3.51
148 149 1.471684 CAGAGCTTTTGAGGTGGATGC 59.528 52.381 0.00 0.00 0.00 3.91
149 150 0.449388 GAGCTTTTGAGGTGGATGCG 59.551 55.000 0.00 0.00 0.00 4.73
150 151 1.153958 GCTTTTGAGGTGGATGCGC 60.154 57.895 0.00 0.00 0.00 6.09
151 152 1.135315 CTTTTGAGGTGGATGCGCG 59.865 57.895 0.00 0.00 0.00 6.86
152 153 2.257286 CTTTTGAGGTGGATGCGCGG 62.257 60.000 8.83 0.00 0.00 6.46
153 154 3.545124 TTTGAGGTGGATGCGCGGT 62.545 57.895 8.83 0.00 0.00 5.68
154 155 3.545124 TTGAGGTGGATGCGCGGTT 62.545 57.895 8.83 0.00 0.00 4.44
155 156 3.195698 GAGGTGGATGCGCGGTTC 61.196 66.667 8.83 0.00 0.00 3.62
156 157 3.950794 GAGGTGGATGCGCGGTTCA 62.951 63.158 8.83 0.00 0.00 3.18
157 158 3.499737 GGTGGATGCGCGGTTCAG 61.500 66.667 8.83 0.00 0.00 3.02
158 159 2.742372 GTGGATGCGCGGTTCAGT 60.742 61.111 8.83 0.00 0.00 3.41
159 160 2.434185 TGGATGCGCGGTTCAGTC 60.434 61.111 8.83 0.00 0.00 3.51
160 161 3.554692 GGATGCGCGGTTCAGTCG 61.555 66.667 8.83 0.00 0.00 4.18
161 162 2.809601 GATGCGCGGTTCAGTCGT 60.810 61.111 8.83 0.00 0.00 4.34
162 163 2.789203 GATGCGCGGTTCAGTCGTC 61.789 63.158 8.83 0.00 0.00 4.20
165 166 3.164011 CGCGGTTCAGTCGTCGAC 61.164 66.667 17.70 17.70 32.30 4.20
166 167 2.050714 GCGGTTCAGTCGTCGACA 60.051 61.111 26.17 4.68 34.60 4.35
167 168 1.659335 GCGGTTCAGTCGTCGACAA 60.659 57.895 26.17 10.81 34.60 3.18
168 169 1.210545 GCGGTTCAGTCGTCGACAAA 61.211 55.000 26.17 16.78 34.60 2.83
169 170 1.415374 CGGTTCAGTCGTCGACAAAT 58.585 50.000 26.17 3.91 34.60 2.32
170 171 1.385743 CGGTTCAGTCGTCGACAAATC 59.614 52.381 26.17 18.01 34.60 2.17
171 172 2.400399 GGTTCAGTCGTCGACAAATCA 58.600 47.619 26.17 3.66 34.60 2.57
172 173 2.798283 GGTTCAGTCGTCGACAAATCAA 59.202 45.455 26.17 8.85 34.60 2.57
173 174 3.120991 GGTTCAGTCGTCGACAAATCAAG 60.121 47.826 26.17 7.74 34.60 3.02
174 175 2.058798 TCAGTCGTCGACAAATCAAGC 58.941 47.619 26.17 0.00 34.60 4.01
175 176 1.126846 CAGTCGTCGACAAATCAAGCC 59.873 52.381 26.17 0.00 34.60 4.35
176 177 1.144969 GTCGTCGACAAATCAAGCCA 58.855 50.000 20.28 0.00 32.09 4.75
177 178 1.529438 GTCGTCGACAAATCAAGCCAA 59.471 47.619 20.28 0.00 32.09 4.52
178 179 2.032377 GTCGTCGACAAATCAAGCCAAA 60.032 45.455 20.28 0.00 32.09 3.28
179 180 2.614520 TCGTCGACAAATCAAGCCAAAA 59.385 40.909 17.16 0.00 0.00 2.44
180 181 3.252215 TCGTCGACAAATCAAGCCAAAAT 59.748 39.130 17.16 0.00 0.00 1.82
181 182 3.361644 CGTCGACAAATCAAGCCAAAATG 59.638 43.478 17.16 0.00 0.00 2.32
182 183 3.121778 GTCGACAAATCAAGCCAAAATGC 59.878 43.478 11.55 0.00 0.00 3.56
183 184 2.090967 CGACAAATCAAGCCAAAATGCG 59.909 45.455 0.00 0.00 36.02 4.73
184 185 3.316283 GACAAATCAAGCCAAAATGCGA 58.684 40.909 0.00 0.00 36.02 5.10
185 186 3.928375 GACAAATCAAGCCAAAATGCGAT 59.072 39.130 0.00 0.00 36.02 4.58
186 187 3.680937 ACAAATCAAGCCAAAATGCGATG 59.319 39.130 0.00 0.00 36.02 3.84
187 188 2.589798 ATCAAGCCAAAATGCGATGG 57.410 45.000 0.00 0.00 39.80 3.51
210 211 3.961414 GGGCCGGGGTGAGTTGAA 61.961 66.667 2.18 0.00 0.00 2.69
211 212 2.355115 GGCCGGGGTGAGTTGAAT 59.645 61.111 2.18 0.00 0.00 2.57
212 213 1.749258 GGCCGGGGTGAGTTGAATC 60.749 63.158 2.18 0.00 0.00 2.52
213 214 1.749258 GCCGGGGTGAGTTGAATCC 60.749 63.158 2.18 0.00 0.00 3.01
214 215 1.449601 CCGGGGTGAGTTGAATCCG 60.450 63.158 0.00 0.00 37.50 4.18
215 216 1.449601 CGGGGTGAGTTGAATCCGG 60.450 63.158 0.00 0.00 34.54 5.14
216 217 1.749258 GGGGTGAGTTGAATCCGGC 60.749 63.158 0.00 0.00 0.00 6.13
217 218 2.106683 GGGTGAGTTGAATCCGGCG 61.107 63.158 0.00 0.00 0.00 6.46
218 219 1.375523 GGTGAGTTGAATCCGGCGT 60.376 57.895 6.01 0.00 0.00 5.68
219 220 1.359459 GGTGAGTTGAATCCGGCGTC 61.359 60.000 6.01 0.00 0.00 5.19
220 221 1.445410 TGAGTTGAATCCGGCGTCG 60.445 57.895 0.29 0.29 0.00 5.12
241 242 4.996113 GCGACGGGCATAAATGTG 57.004 55.556 0.00 0.00 42.87 3.21
242 243 2.094904 GCGACGGGCATAAATGTGT 58.905 52.632 0.00 0.00 42.87 3.72
243 244 0.450184 GCGACGGGCATAAATGTGTT 59.550 50.000 0.00 0.00 42.87 3.32
244 245 1.793714 GCGACGGGCATAAATGTGTTG 60.794 52.381 0.00 0.00 42.87 3.33
245 246 1.735018 CGACGGGCATAAATGTGTTGA 59.265 47.619 0.00 0.00 0.00 3.18
246 247 2.354510 CGACGGGCATAAATGTGTTGAT 59.645 45.455 0.00 0.00 0.00 2.57
247 248 3.181501 CGACGGGCATAAATGTGTTGATT 60.182 43.478 0.00 0.00 0.00 2.57
248 249 4.674101 CGACGGGCATAAATGTGTTGATTT 60.674 41.667 0.00 0.00 0.00 2.17
249 250 5.146010 ACGGGCATAAATGTGTTGATTTT 57.854 34.783 0.00 0.00 0.00 1.82
250 251 6.274157 ACGGGCATAAATGTGTTGATTTTA 57.726 33.333 0.00 0.00 0.00 1.52
251 252 6.692486 ACGGGCATAAATGTGTTGATTTTAA 58.308 32.000 0.00 0.00 0.00 1.52
252 253 7.327214 ACGGGCATAAATGTGTTGATTTTAAT 58.673 30.769 0.00 0.00 0.00 1.40
253 254 8.470805 ACGGGCATAAATGTGTTGATTTTAATA 58.529 29.630 0.00 0.00 0.00 0.98
254 255 9.474920 CGGGCATAAATGTGTTGATTTTAATAT 57.525 29.630 0.00 0.00 0.00 1.28
283 284 7.672983 AATAGTGGATTATGTCAAATAGCGG 57.327 36.000 0.00 0.00 0.00 5.52
284 285 3.815401 AGTGGATTATGTCAAATAGCGGC 59.185 43.478 0.00 0.00 0.00 6.53
285 286 2.805671 TGGATTATGTCAAATAGCGGCG 59.194 45.455 0.51 0.51 0.00 6.46
286 287 2.159627 GGATTATGTCAAATAGCGGCGG 59.840 50.000 9.78 0.00 0.00 6.13
287 288 2.605837 TTATGTCAAATAGCGGCGGA 57.394 45.000 9.78 0.00 0.00 5.54
288 289 1.860676 TATGTCAAATAGCGGCGGAC 58.139 50.000 9.78 6.91 0.00 4.79
289 290 0.178068 ATGTCAAATAGCGGCGGACT 59.822 50.000 9.78 0.00 0.00 3.85
290 291 0.036765 TGTCAAATAGCGGCGGACTT 60.037 50.000 9.78 0.00 0.00 3.01
291 292 1.084289 GTCAAATAGCGGCGGACTTT 58.916 50.000 9.78 0.00 0.00 2.66
292 293 1.062148 GTCAAATAGCGGCGGACTTTC 59.938 52.381 9.78 0.00 0.00 2.62
293 294 1.083489 CAAATAGCGGCGGACTTTCA 58.917 50.000 9.78 0.00 0.00 2.69
294 295 1.466950 CAAATAGCGGCGGACTTTCAA 59.533 47.619 9.78 0.00 0.00 2.69
295 296 1.816074 AATAGCGGCGGACTTTCAAA 58.184 45.000 9.78 0.00 0.00 2.69
296 297 2.038387 ATAGCGGCGGACTTTCAAAT 57.962 45.000 9.78 0.00 0.00 2.32
297 298 1.365699 TAGCGGCGGACTTTCAAATC 58.634 50.000 9.78 0.00 0.00 2.17
298 299 0.605319 AGCGGCGGACTTTCAAATCA 60.605 50.000 9.78 0.00 0.00 2.57
299 300 0.179189 GCGGCGGACTTTCAAATCAG 60.179 55.000 9.78 0.00 0.00 2.90
300 301 0.179189 CGGCGGACTTTCAAATCAGC 60.179 55.000 0.00 0.00 35.57 4.26
301 302 1.168714 GGCGGACTTTCAAATCAGCT 58.831 50.000 0.00 0.00 36.44 4.24
302 303 2.356135 GGCGGACTTTCAAATCAGCTA 58.644 47.619 0.00 0.00 36.44 3.32
303 304 2.945668 GGCGGACTTTCAAATCAGCTAT 59.054 45.455 0.00 0.00 36.44 2.97
304 305 4.127171 GGCGGACTTTCAAATCAGCTATA 58.873 43.478 0.00 0.00 36.44 1.31
305 306 4.212214 GGCGGACTTTCAAATCAGCTATAG 59.788 45.833 0.00 0.00 36.44 1.31
306 307 4.319118 GCGGACTTTCAAATCAGCTATAGC 60.319 45.833 17.33 17.33 42.49 2.97
307 308 4.811024 CGGACTTTCAAATCAGCTATAGCA 59.189 41.667 26.07 7.38 45.16 3.49
308 309 5.294306 CGGACTTTCAAATCAGCTATAGCAA 59.706 40.000 26.07 14.21 45.16 3.91
309 310 6.183360 CGGACTTTCAAATCAGCTATAGCAAA 60.183 38.462 26.07 13.85 45.16 3.68
310 311 7.192232 GGACTTTCAAATCAGCTATAGCAAAG 58.808 38.462 26.07 23.06 45.16 2.77
311 312 7.148171 GGACTTTCAAATCAGCTATAGCAAAGT 60.148 37.037 25.27 25.27 45.16 2.66
312 313 8.115490 ACTTTCAAATCAGCTATAGCAAAGTT 57.885 30.769 26.07 15.32 45.16 2.66
313 314 9.231297 ACTTTCAAATCAGCTATAGCAAAGTTA 57.769 29.630 26.07 5.46 45.16 2.24
324 325 5.757850 ATAGCAAAGTTATAGCAGGCAAC 57.242 39.130 0.00 0.00 0.00 4.17
325 326 2.420022 AGCAAAGTTATAGCAGGCAACG 59.580 45.455 0.00 0.00 46.39 4.10
326 327 2.418628 GCAAAGTTATAGCAGGCAACGA 59.581 45.455 0.00 0.00 46.39 3.85
327 328 3.065371 GCAAAGTTATAGCAGGCAACGAT 59.935 43.478 0.00 0.00 46.39 3.73
328 329 4.591202 CAAAGTTATAGCAGGCAACGATG 58.409 43.478 0.00 0.00 46.39 3.84
329 330 2.838736 AGTTATAGCAGGCAACGATGG 58.161 47.619 0.00 0.00 46.39 3.51
338 339 3.389741 GCAACGATGGCAAGAAGTG 57.610 52.632 0.00 0.00 0.00 3.16
339 340 0.874390 GCAACGATGGCAAGAAGTGA 59.126 50.000 0.00 0.00 0.00 3.41
340 341 1.470098 GCAACGATGGCAAGAAGTGAT 59.530 47.619 0.00 0.00 0.00 3.06
341 342 2.476854 GCAACGATGGCAAGAAGTGATC 60.477 50.000 0.00 0.00 0.00 2.92
342 343 1.645034 ACGATGGCAAGAAGTGATCG 58.355 50.000 0.00 0.00 41.29 3.69
343 344 0.933097 CGATGGCAAGAAGTGATCGG 59.067 55.000 0.00 0.00 33.82 4.18
344 345 1.471501 CGATGGCAAGAAGTGATCGGA 60.472 52.381 0.00 0.00 33.82 4.55
345 346 2.804572 CGATGGCAAGAAGTGATCGGAT 60.805 50.000 0.00 0.00 33.82 4.18
346 347 2.315925 TGGCAAGAAGTGATCGGATC 57.684 50.000 11.07 11.07 0.00 3.36
347 348 1.212616 GGCAAGAAGTGATCGGATCG 58.787 55.000 12.99 0.00 0.00 3.69
348 349 1.202417 GGCAAGAAGTGATCGGATCGA 60.202 52.381 12.99 0.00 41.13 3.59
349 350 2.540515 GCAAGAAGTGATCGGATCGAA 58.459 47.619 12.99 0.00 39.99 3.71
350 351 2.537625 GCAAGAAGTGATCGGATCGAAG 59.462 50.000 12.99 0.94 39.99 3.79
351 352 3.775202 CAAGAAGTGATCGGATCGAAGT 58.225 45.455 12.99 0.00 39.99 3.01
352 353 3.428746 AGAAGTGATCGGATCGAAGTG 57.571 47.619 12.99 0.00 39.99 3.16
353 354 2.099921 AGAAGTGATCGGATCGAAGTGG 59.900 50.000 12.99 0.00 39.99 4.00
354 355 0.747255 AGTGATCGGATCGAAGTGGG 59.253 55.000 12.99 0.00 39.99 4.61
355 356 0.249489 GTGATCGGATCGAAGTGGGG 60.249 60.000 12.99 0.00 39.99 4.96
356 357 0.396556 TGATCGGATCGAAGTGGGGA 60.397 55.000 12.99 0.00 39.99 4.81
357 358 0.315568 GATCGGATCGAAGTGGGGAG 59.684 60.000 1.62 0.00 39.99 4.30
358 359 1.115930 ATCGGATCGAAGTGGGGAGG 61.116 60.000 0.00 0.00 39.99 4.30
359 360 1.756950 CGGATCGAAGTGGGGAGGA 60.757 63.158 0.00 0.00 0.00 3.71
360 361 1.739338 CGGATCGAAGTGGGGAGGAG 61.739 65.000 0.00 0.00 0.00 3.69
361 362 1.443828 GATCGAAGTGGGGAGGAGC 59.556 63.158 0.00 0.00 0.00 4.70
362 363 2.356818 GATCGAAGTGGGGAGGAGCG 62.357 65.000 0.00 0.00 0.00 5.03
363 364 4.821589 CGAAGTGGGGAGGAGCGC 62.822 72.222 0.00 0.00 0.00 5.92
364 365 4.821589 GAAGTGGGGAGGAGCGCG 62.822 72.222 0.00 0.00 0.00 6.86
380 381 3.998672 CGGTGGGTGCTACGTGGT 61.999 66.667 0.00 0.00 0.00 4.16
381 382 2.358247 GGTGGGTGCTACGTGGTG 60.358 66.667 0.00 0.00 0.00 4.17
382 383 2.424302 GTGGGTGCTACGTGGTGT 59.576 61.111 0.00 0.00 0.00 4.16
383 384 1.666872 GTGGGTGCTACGTGGTGTC 60.667 63.158 0.00 0.00 0.00 3.67
384 385 2.431942 GGGTGCTACGTGGTGTCG 60.432 66.667 0.00 0.00 0.00 4.35
385 386 2.431942 GGTGCTACGTGGTGTCGG 60.432 66.667 0.00 0.00 34.94 4.79
386 387 3.110178 GTGCTACGTGGTGTCGGC 61.110 66.667 0.00 0.00 34.94 5.54
387 388 4.710695 TGCTACGTGGTGTCGGCG 62.711 66.667 0.00 0.00 33.76 6.46
389 390 4.789075 CTACGTGGTGTCGGCGGG 62.789 72.222 7.21 0.00 34.94 6.13
405 406 4.388499 GGACGTGTGGTGGCCGAT 62.388 66.667 0.00 0.00 0.00 4.18
406 407 3.118454 GACGTGTGGTGGCCGATG 61.118 66.667 0.00 0.00 0.00 3.84
407 408 3.583276 GACGTGTGGTGGCCGATGA 62.583 63.158 0.00 0.00 0.00 2.92
408 409 2.815211 CGTGTGGTGGCCGATGAG 60.815 66.667 0.00 0.00 0.00 2.90
409 410 2.662596 GTGTGGTGGCCGATGAGA 59.337 61.111 0.00 0.00 0.00 3.27
410 411 1.741770 GTGTGGTGGCCGATGAGAC 60.742 63.158 0.00 0.00 0.00 3.36
411 412 2.213513 TGTGGTGGCCGATGAGACA 61.214 57.895 0.00 0.00 0.00 3.41
412 413 1.003839 GTGGTGGCCGATGAGACAA 60.004 57.895 0.00 0.00 0.00 3.18
413 414 1.021390 GTGGTGGCCGATGAGACAAG 61.021 60.000 0.00 0.00 0.00 3.16
414 415 1.296715 GGTGGCCGATGAGACAAGT 59.703 57.895 0.00 0.00 0.00 3.16
415 416 0.535335 GGTGGCCGATGAGACAAGTA 59.465 55.000 0.00 0.00 0.00 2.24
416 417 1.139058 GGTGGCCGATGAGACAAGTAT 59.861 52.381 0.00 0.00 0.00 2.12
417 418 2.364324 GGTGGCCGATGAGACAAGTATA 59.636 50.000 0.00 0.00 0.00 1.47
418 419 3.006967 GGTGGCCGATGAGACAAGTATAT 59.993 47.826 0.00 0.00 0.00 0.86
419 420 4.503296 GGTGGCCGATGAGACAAGTATATT 60.503 45.833 0.00 0.00 0.00 1.28
420 421 4.686554 GTGGCCGATGAGACAAGTATATTC 59.313 45.833 0.00 0.00 0.00 1.75
421 422 4.246458 GGCCGATGAGACAAGTATATTCC 58.754 47.826 0.00 0.00 0.00 3.01
422 423 4.262463 GGCCGATGAGACAAGTATATTCCA 60.262 45.833 0.00 0.00 0.00 3.53
423 424 5.297547 GCCGATGAGACAAGTATATTCCAA 58.702 41.667 0.00 0.00 0.00 3.53
424 425 5.758296 GCCGATGAGACAAGTATATTCCAAA 59.242 40.000 0.00 0.00 0.00 3.28
425 426 6.073548 GCCGATGAGACAAGTATATTCCAAAG 60.074 42.308 0.00 0.00 0.00 2.77
426 427 6.986817 CCGATGAGACAAGTATATTCCAAAGT 59.013 38.462 0.00 0.00 0.00 2.66
427 428 7.169982 CCGATGAGACAAGTATATTCCAAAGTC 59.830 40.741 0.00 0.00 0.00 3.01
428 429 7.096436 CGATGAGACAAGTATATTCCAAAGTCG 60.096 40.741 0.00 0.00 0.00 4.18
429 430 6.338146 TGAGACAAGTATATTCCAAAGTCGG 58.662 40.000 0.00 0.00 0.00 4.79
430 431 6.070995 TGAGACAAGTATATTCCAAAGTCGGT 60.071 38.462 0.00 0.00 0.00 4.69
431 432 6.106673 AGACAAGTATATTCCAAAGTCGGTG 58.893 40.000 0.00 0.00 0.00 4.94
432 433 4.634443 ACAAGTATATTCCAAAGTCGGTGC 59.366 41.667 0.00 0.00 0.00 5.01
433 434 4.481368 AGTATATTCCAAAGTCGGTGCA 57.519 40.909 0.00 0.00 0.00 4.57
434 435 4.442706 AGTATATTCCAAAGTCGGTGCAG 58.557 43.478 0.00 0.00 0.00 4.41
435 436 1.448985 TATTCCAAAGTCGGTGCAGC 58.551 50.000 5.64 5.64 0.00 5.25
436 437 0.250901 ATTCCAAAGTCGGTGCAGCT 60.251 50.000 14.92 0.00 0.00 4.24
437 438 1.165907 TTCCAAAGTCGGTGCAGCTG 61.166 55.000 14.92 10.11 0.00 4.24
438 439 1.893808 CCAAAGTCGGTGCAGCTGT 60.894 57.895 16.64 0.00 0.00 4.40
439 440 1.280746 CAAAGTCGGTGCAGCTGTG 59.719 57.895 16.64 3.33 0.00 3.66
440 441 1.893808 AAAGTCGGTGCAGCTGTGG 60.894 57.895 16.64 2.37 0.00 4.17
441 442 2.608970 AAAGTCGGTGCAGCTGTGGT 62.609 55.000 16.64 0.00 0.00 4.16
442 443 2.996168 AAGTCGGTGCAGCTGTGGTC 62.996 60.000 16.64 0.00 0.00 4.02
443 444 3.233980 TCGGTGCAGCTGTGGTCT 61.234 61.111 16.64 0.00 0.00 3.85
444 445 1.906333 TCGGTGCAGCTGTGGTCTA 60.906 57.895 16.64 0.00 0.00 2.59
445 446 1.005037 CGGTGCAGCTGTGGTCTAA 60.005 57.895 16.64 0.00 0.00 2.10
446 447 0.391661 CGGTGCAGCTGTGGTCTAAT 60.392 55.000 16.64 0.00 0.00 1.73
447 448 1.134818 CGGTGCAGCTGTGGTCTAATA 60.135 52.381 16.64 0.00 0.00 0.98
448 449 2.280628 GGTGCAGCTGTGGTCTAATAC 58.719 52.381 16.64 0.00 0.00 1.89
467 468 2.335933 ACCGATAAGGGATTGGGTAGG 58.664 52.381 0.00 0.00 46.96 3.18
468 469 2.090380 ACCGATAAGGGATTGGGTAGGA 60.090 50.000 0.00 0.00 46.96 2.94
469 470 2.976882 CCGATAAGGGATTGGGTAGGAA 59.023 50.000 0.00 0.00 35.57 3.36
470 471 3.244457 CCGATAAGGGATTGGGTAGGAAC 60.244 52.174 0.00 0.00 35.57 3.62
471 472 3.554337 CGATAAGGGATTGGGTAGGAACG 60.554 52.174 0.00 0.00 0.00 3.95
472 473 0.916809 AAGGGATTGGGTAGGAACGG 59.083 55.000 0.00 0.00 0.00 4.44
473 474 1.153025 GGGATTGGGTAGGAACGGC 60.153 63.158 0.00 0.00 0.00 5.68
474 475 1.632965 GGGATTGGGTAGGAACGGCT 61.633 60.000 0.00 0.00 0.00 5.52
475 476 0.255033 GGATTGGGTAGGAACGGCTT 59.745 55.000 0.00 0.00 0.00 4.35
476 477 1.487558 GGATTGGGTAGGAACGGCTTA 59.512 52.381 0.00 0.00 0.00 3.09
477 478 2.484947 GGATTGGGTAGGAACGGCTTAG 60.485 54.545 0.00 0.00 0.00 2.18
478 479 1.941377 TTGGGTAGGAACGGCTTAGA 58.059 50.000 0.00 0.00 0.00 2.10
479 480 1.941377 TGGGTAGGAACGGCTTAGAA 58.059 50.000 0.00 0.00 0.00 2.10
480 481 1.829222 TGGGTAGGAACGGCTTAGAAG 59.171 52.381 0.00 0.00 0.00 2.85
481 482 1.829849 GGGTAGGAACGGCTTAGAAGT 59.170 52.381 0.00 0.00 0.00 3.01
482 483 2.418334 GGGTAGGAACGGCTTAGAAGTG 60.418 54.545 0.00 0.00 0.00 3.16
483 484 2.269172 GTAGGAACGGCTTAGAAGTGC 58.731 52.381 0.00 0.00 0.00 4.40
484 485 0.685097 AGGAACGGCTTAGAAGTGCA 59.315 50.000 0.00 0.00 0.00 4.57
485 486 1.071699 AGGAACGGCTTAGAAGTGCAA 59.928 47.619 0.00 0.00 0.00 4.08
486 487 1.877443 GGAACGGCTTAGAAGTGCAAA 59.123 47.619 0.00 0.00 0.00 3.68
487 488 2.292292 GGAACGGCTTAGAAGTGCAAAA 59.708 45.455 0.00 0.00 0.00 2.44
488 489 3.297472 GAACGGCTTAGAAGTGCAAAAC 58.703 45.455 0.00 0.00 0.00 2.43
489 490 2.572290 ACGGCTTAGAAGTGCAAAACT 58.428 42.857 0.00 0.00 42.60 2.66
490 491 2.290641 ACGGCTTAGAAGTGCAAAACTG 59.709 45.455 0.00 0.00 39.81 3.16
491 492 2.548057 CGGCTTAGAAGTGCAAAACTGA 59.452 45.455 0.00 0.00 39.81 3.41
492 493 3.003275 CGGCTTAGAAGTGCAAAACTGAA 59.997 43.478 0.00 0.00 39.81 3.02
493 494 4.290969 GGCTTAGAAGTGCAAAACTGAAC 58.709 43.478 0.00 0.00 39.81 3.18
494 495 4.036852 GGCTTAGAAGTGCAAAACTGAACT 59.963 41.667 0.00 0.00 39.81 3.01
495 496 5.450550 GGCTTAGAAGTGCAAAACTGAACTT 60.451 40.000 0.00 0.00 40.21 2.66
496 497 6.036470 GCTTAGAAGTGCAAAACTGAACTTT 58.964 36.000 0.12 0.00 37.77 2.66
497 498 6.531594 GCTTAGAAGTGCAAAACTGAACTTTT 59.468 34.615 0.12 0.00 37.77 2.27
498 499 7.700656 GCTTAGAAGTGCAAAACTGAACTTTTA 59.299 33.333 0.12 0.00 37.77 1.52
499 500 9.736023 CTTAGAAGTGCAAAACTGAACTTTTAT 57.264 29.630 0.12 0.00 37.77 1.40
501 502 8.634475 AGAAGTGCAAAACTGAACTTTTATTC 57.366 30.769 0.12 0.00 37.77 1.75
502 503 7.706607 AGAAGTGCAAAACTGAACTTTTATTCC 59.293 33.333 0.12 0.00 37.77 3.01
503 504 7.112452 AGTGCAAAACTGAACTTTTATTCCT 57.888 32.000 0.00 0.00 37.88 3.36
504 505 7.203218 AGTGCAAAACTGAACTTTTATTCCTC 58.797 34.615 0.00 0.00 37.88 3.71
505 506 6.142320 GTGCAAAACTGAACTTTTATTCCTCG 59.858 38.462 0.00 0.00 0.00 4.63
506 507 6.038825 TGCAAAACTGAACTTTTATTCCTCGA 59.961 34.615 0.00 0.00 0.00 4.04
507 508 6.915843 GCAAAACTGAACTTTTATTCCTCGAA 59.084 34.615 0.00 0.00 0.00 3.71
508 509 7.434013 GCAAAACTGAACTTTTATTCCTCGAAA 59.566 33.333 0.00 0.00 0.00 3.46
509 510 9.296400 CAAAACTGAACTTTTATTCCTCGAAAA 57.704 29.630 0.00 0.00 0.00 2.29
510 511 8.851960 AAACTGAACTTTTATTCCTCGAAAAC 57.148 30.769 0.00 0.00 0.00 2.43
511 512 7.803279 ACTGAACTTTTATTCCTCGAAAACT 57.197 32.000 0.00 0.00 0.00 2.66
512 513 7.639945 ACTGAACTTTTATTCCTCGAAAACTG 58.360 34.615 0.00 0.00 0.00 3.16
513 514 7.282450 ACTGAACTTTTATTCCTCGAAAACTGT 59.718 33.333 0.00 0.00 0.00 3.55
514 515 8.665643 TGAACTTTTATTCCTCGAAAACTGTA 57.334 30.769 0.00 0.00 0.00 2.74
515 516 9.280174 TGAACTTTTATTCCTCGAAAACTGTAT 57.720 29.630 0.00 0.00 0.00 2.29
520 521 8.726870 TTTATTCCTCGAAAACTGTATAAGGG 57.273 34.615 0.00 0.00 0.00 3.95
521 522 6.555463 ATTCCTCGAAAACTGTATAAGGGA 57.445 37.500 0.00 0.00 0.00 4.20
522 523 6.555463 TTCCTCGAAAACTGTATAAGGGAT 57.445 37.500 0.00 0.00 0.00 3.85
523 524 6.158023 TCCTCGAAAACTGTATAAGGGATC 57.842 41.667 0.00 0.00 0.00 3.36
524 525 4.982916 CCTCGAAAACTGTATAAGGGATCG 59.017 45.833 0.00 0.00 32.60 3.69
525 526 4.940463 TCGAAAACTGTATAAGGGATCGG 58.060 43.478 0.00 0.00 32.36 4.18
526 527 4.403432 TCGAAAACTGTATAAGGGATCGGT 59.597 41.667 0.00 0.00 32.36 4.69
527 528 4.743644 CGAAAACTGTATAAGGGATCGGTC 59.256 45.833 0.00 0.00 0.00 4.79
528 529 5.667466 GAAAACTGTATAAGGGATCGGTCA 58.333 41.667 0.00 0.00 0.00 4.02
529 530 4.939052 AACTGTATAAGGGATCGGTCAG 57.061 45.455 0.00 0.00 0.00 3.51
530 531 4.180377 ACTGTATAAGGGATCGGTCAGA 57.820 45.455 0.00 0.00 0.00 3.27
544 545 6.127842 GGATCGGTCAGAAGATAATAGACCTC 60.128 46.154 0.00 0.00 45.03 3.85
555 556 6.879400 AGATAATAGACCTCTTTCGTGCTTT 58.121 36.000 0.00 0.00 0.00 3.51
559 560 0.531974 ACCTCTTTCGTGCTTTCGCA 60.532 50.000 0.00 0.00 45.60 5.10
573 574 2.450619 TCGCATGCGATGAAAACGA 58.549 47.368 37.21 13.60 44.01 3.85
622 629 8.713971 TGTCCAAGGAATGCTTATCTAGAAATA 58.286 33.333 0.00 0.00 0.00 1.40
629 639 8.778358 GGAATGCTTATCTAGAAATAACACCAG 58.222 37.037 0.00 0.00 0.00 4.00
630 640 7.736447 ATGCTTATCTAGAAATAACACCAGC 57.264 36.000 0.00 0.00 0.00 4.85
632 642 7.282585 TGCTTATCTAGAAATAACACCAGCAT 58.717 34.615 0.00 0.00 0.00 3.79
646 656 0.935898 CAGCATGGACTCTCATTCGC 59.064 55.000 0.00 0.00 0.00 4.70
661 671 4.597079 TCATTCGCGGAATGCTATTTTTC 58.403 39.130 19.74 0.00 46.14 2.29
662 672 4.335315 TCATTCGCGGAATGCTATTTTTCT 59.665 37.500 19.74 0.00 46.14 2.52
664 680 2.612212 TCGCGGAATGCTATTTTTCTCC 59.388 45.455 6.13 0.00 43.27 3.71
667 683 3.489229 GCGGAATGCTATTTTTCTCCACC 60.489 47.826 0.00 0.00 41.73 4.61
669 685 4.438744 CGGAATGCTATTTTTCTCCACCAC 60.439 45.833 0.00 0.00 0.00 4.16
672 688 6.295292 GGAATGCTATTTTTCTCCACCACTTT 60.295 38.462 0.00 0.00 0.00 2.66
675 691 3.643159 ATTTTTCTCCACCACTTTCGC 57.357 42.857 0.00 0.00 0.00 4.70
686 702 2.095768 ACCACTTTCGCGAATGTCATTG 60.096 45.455 30.55 21.18 0.00 2.82
689 705 1.906966 CTTTCGCGAATGTCATTGCAC 59.093 47.619 24.05 0.00 0.00 4.57
690 706 0.871057 TTCGCGAATGTCATTGCACA 59.129 45.000 19.38 0.00 0.00 4.57
692 708 0.976963 CGCGAATGTCATTGCACAAC 59.023 50.000 0.00 0.00 0.00 3.32
696 712 3.295785 CGAATGTCATTGCACAACGAAA 58.704 40.909 1.88 0.00 34.36 3.46
710 726 2.923020 CAACGAAACTTTGCAAGCACTT 59.077 40.909 0.00 0.00 0.00 3.16
714 730 3.611986 CGAAACTTTGCAAGCACTTGAAA 59.388 39.130 14.44 7.15 42.93 2.69
716 732 5.389307 CGAAACTTTGCAAGCACTTGAAAAA 60.389 36.000 15.61 12.40 44.80 1.94
724 740 5.585445 TGCAAGCACTTGAAAAATTCAACAT 59.415 32.000 14.44 0.00 44.21 2.71
774 790 7.592439 TTTTTGAAAACCGTTTCCGTTAATT 57.408 28.000 0.00 0.00 42.20 1.40
777 793 6.809297 TGAAAACCGTTTCCGTTAATTTTC 57.191 33.333 0.00 0.00 42.20 2.29
778 794 6.562518 TGAAAACCGTTTCCGTTAATTTTCT 58.437 32.000 0.00 0.00 42.20 2.52
779 795 7.034397 TGAAAACCGTTTCCGTTAATTTTCTT 58.966 30.769 0.00 0.00 42.20 2.52
784 800 9.531942 AACCGTTTCCGTTAATTTTCTTTTTAT 57.468 25.926 0.00 0.00 0.00 1.40
791 807 9.405587 TCCGTTAATTTTCTTTTTATTGCTCAG 57.594 29.630 0.00 0.00 0.00 3.35
792 808 8.647226 CCGTTAATTTTCTTTTTATTGCTCAGG 58.353 33.333 0.00 0.00 0.00 3.86
793 809 8.162245 CGTTAATTTTCTTTTTATTGCTCAGGC 58.838 33.333 0.00 0.00 39.26 4.85
803 820 3.200593 GCTCAGGCAGGTGCATCG 61.201 66.667 4.01 0.00 44.36 3.84
804 821 2.580815 CTCAGGCAGGTGCATCGA 59.419 61.111 4.01 0.00 44.36 3.59
830 847 2.732412 TGAGCAGAAGAGGACTTTCG 57.268 50.000 0.00 0.00 36.39 3.46
831 848 1.337260 TGAGCAGAAGAGGACTTTCGC 60.337 52.381 0.00 0.00 36.39 4.70
840 857 0.685097 AGGACTTTCGCCAGCTACAA 59.315 50.000 0.00 0.00 0.00 2.41
841 858 0.796927 GGACTTTCGCCAGCTACAAC 59.203 55.000 0.00 0.00 0.00 3.32
842 859 0.438830 GACTTTCGCCAGCTACAACG 59.561 55.000 0.00 0.00 0.00 4.10
853 879 1.683917 AGCTACAACGCCCAGATAGAG 59.316 52.381 0.00 0.00 0.00 2.43
858 884 1.690219 AACGCCCAGATAGAGCCCAG 61.690 60.000 0.00 0.00 0.00 4.45
911 937 0.608856 ATGATCAAGGCACGCCAACA 60.609 50.000 11.35 3.31 38.92 3.33
915 941 0.958382 TCAAGGCACGCCAACATACC 60.958 55.000 11.35 0.00 38.92 2.73
916 942 1.677633 AAGGCACGCCAACATACCC 60.678 57.895 11.35 0.00 38.92 3.69
918 944 2.406616 GGCACGCCAACATACCCAG 61.407 63.158 2.36 0.00 35.81 4.45
919 945 2.406616 GCACGCCAACATACCCAGG 61.407 63.158 0.00 0.00 0.00 4.45
922 948 3.603365 GCCAACATACCCAGGCAC 58.397 61.111 0.00 0.00 46.26 5.01
926 952 1.453155 CAACATACCCAGGCACACTC 58.547 55.000 0.00 0.00 0.00 3.51
929 955 1.229820 ATACCCAGGCACACTCCCA 60.230 57.895 0.00 0.00 0.00 4.37
952 978 2.644418 GCACTTGCATGCCGTCAA 59.356 55.556 16.68 1.11 39.86 3.18
953 979 1.730547 GCACTTGCATGCCGTCAAC 60.731 57.895 16.68 0.96 39.86 3.18
954 980 1.653667 CACTTGCATGCCGTCAACA 59.346 52.632 16.68 0.00 0.00 3.33
955 981 0.030504 CACTTGCATGCCGTCAACAA 59.969 50.000 16.68 0.00 0.00 2.83
956 982 0.743688 ACTTGCATGCCGTCAACAAA 59.256 45.000 16.68 0.00 0.00 2.83
957 983 1.340889 ACTTGCATGCCGTCAACAAAT 59.659 42.857 16.68 0.00 0.00 2.32
958 984 1.722464 CTTGCATGCCGTCAACAAATG 59.278 47.619 16.68 0.00 0.00 2.32
959 985 0.957362 TGCATGCCGTCAACAAATGA 59.043 45.000 16.68 0.00 35.05 2.57
960 986 1.545136 TGCATGCCGTCAACAAATGAT 59.455 42.857 16.68 0.00 40.97 2.45
961 987 2.751806 TGCATGCCGTCAACAAATGATA 59.248 40.909 16.68 0.00 40.97 2.15
962 988 3.192212 TGCATGCCGTCAACAAATGATAA 59.808 39.130 16.68 0.00 40.97 1.75
964 990 4.442073 GCATGCCGTCAACAAATGATAATC 59.558 41.667 6.36 0.00 40.97 1.75
967 993 4.096231 TGCCGTCAACAAATGATAATCCTG 59.904 41.667 0.00 0.00 40.97 3.86
1066 1092 1.882623 TGACCATCGATCCATCTCTCG 59.117 52.381 0.00 0.00 36.25 4.04
1072 1098 4.438608 CCATCGATCCATCTCTCGAGATTC 60.439 50.000 17.03 5.71 45.31 2.52
1090 1116 1.649321 TCCAGAGACTCCACTGCAAT 58.351 50.000 0.00 0.00 33.40 3.56
1106 1143 1.396653 CAATCCAGCTCCCCATTGAC 58.603 55.000 0.00 0.00 0.00 3.18
1109 1146 2.124570 CAGCTCCCCATTGACCCG 60.125 66.667 0.00 0.00 0.00 5.28
1114 1151 1.972660 CTCCCCATTGACCCGTCTCC 61.973 65.000 0.00 0.00 0.00 3.71
1116 1153 1.995626 CCCATTGACCCGTCTCCCT 60.996 63.158 0.00 0.00 0.00 4.20
1369 1406 1.061131 CGTCTTCAATGTAAGCGCAGG 59.939 52.381 11.47 0.00 0.00 4.85
1370 1407 2.076863 GTCTTCAATGTAAGCGCAGGT 58.923 47.619 11.47 0.00 44.60 4.00
1424 1461 1.299541 CCGTGCAACTGAACTCAAGT 58.700 50.000 0.00 0.00 31.75 3.16
1425 1462 1.670811 CCGTGCAACTGAACTCAAGTT 59.329 47.619 0.00 0.00 36.12 2.66
1427 1464 3.498397 CCGTGCAACTGAACTCAAGTTAT 59.502 43.478 0.00 0.00 34.19 1.89
1433 1473 6.204688 TGCAACTGAACTCAAGTTATTACTGG 59.795 38.462 0.00 0.00 38.56 4.00
1521 1570 1.300931 GTCGTCTGCTGCCAGTTCA 60.301 57.895 0.00 0.00 40.09 3.18
1545 1594 2.184322 CCATGGTGGTCCTCGACG 59.816 66.667 2.57 0.00 32.65 5.12
1995 2047 1.217882 CGTGCCGTTGAAGAAGAAGT 58.782 50.000 0.00 0.00 0.00 3.01
1996 2048 1.597663 CGTGCCGTTGAAGAAGAAGTT 59.402 47.619 0.00 0.00 0.00 2.66
1997 2049 2.599848 CGTGCCGTTGAAGAAGAAGTTG 60.600 50.000 0.00 0.00 0.00 3.16
2038 2090 1.759445 AGGACATGATCTTCGTCAGGG 59.241 52.381 0.00 0.00 34.41 4.45
2039 2091 1.202580 GGACATGATCTTCGTCAGGGG 60.203 57.143 0.00 0.00 34.41 4.79
2040 2092 1.757118 GACATGATCTTCGTCAGGGGA 59.243 52.381 0.00 0.00 34.41 4.81
2041 2093 1.759445 ACATGATCTTCGTCAGGGGAG 59.241 52.381 0.00 0.00 34.41 4.30
2042 2094 0.755686 ATGATCTTCGTCAGGGGAGC 59.244 55.000 0.00 0.00 0.00 4.70
2043 2095 0.324738 TGATCTTCGTCAGGGGAGCT 60.325 55.000 0.00 0.00 0.00 4.09
2044 2096 0.103937 GATCTTCGTCAGGGGAGCTG 59.896 60.000 0.00 0.00 0.00 4.24
2045 2097 1.965754 ATCTTCGTCAGGGGAGCTGC 61.966 60.000 0.00 0.00 0.00 5.25
2046 2098 3.997064 CTTCGTCAGGGGAGCTGCG 62.997 68.421 0.00 0.00 0.00 5.18
2080 2132 1.222115 GGAGCGTGAGTCAACCACAC 61.222 60.000 0.00 0.00 34.36 3.82
2090 2142 1.064003 TCAACCACACCACTAGGCAT 58.936 50.000 0.00 0.00 39.06 4.40
2104 2156 2.584835 AGGCATGCACCTTTTCAGTA 57.415 45.000 21.36 0.00 36.28 2.74
2107 2159 1.466360 GCATGCACCTTTTCAGTAGCG 60.466 52.381 14.21 0.00 0.00 4.26
2120 2172 2.359214 TCAGTAGCGAGGATCATGTCAC 59.641 50.000 0.00 0.00 33.17 3.67
2121 2173 1.683917 AGTAGCGAGGATCATGTCACC 59.316 52.381 0.00 0.00 33.17 4.02
2122 2174 1.409064 GTAGCGAGGATCATGTCACCA 59.591 52.381 0.00 0.00 33.17 4.17
2123 2175 0.904649 AGCGAGGATCATGTCACCAA 59.095 50.000 0.00 0.00 33.17 3.67
2124 2176 1.009829 GCGAGGATCATGTCACCAAC 58.990 55.000 0.00 0.00 33.17 3.77
2125 2177 1.406069 GCGAGGATCATGTCACCAACT 60.406 52.381 0.00 0.00 33.17 3.16
2126 2178 2.544685 CGAGGATCATGTCACCAACTC 58.455 52.381 0.00 0.00 33.17 3.01
2127 2179 2.094026 CGAGGATCATGTCACCAACTCA 60.094 50.000 0.00 0.00 33.17 3.41
2128 2180 3.265791 GAGGATCATGTCACCAACTCAC 58.734 50.000 0.00 0.00 33.17 3.51
2129 2181 2.026822 AGGATCATGTCACCAACTCACC 60.027 50.000 0.00 0.00 0.00 4.02
2140 2192 2.439507 ACCAACTCACCATGTCAAGTCT 59.560 45.455 0.00 0.00 0.00 3.24
2153 2205 1.948834 TCAAGTCTGTCAACGTCCGTA 59.051 47.619 0.00 0.00 0.00 4.02
2162 2214 5.585844 TCTGTCAACGTCCGTATGATAGTAA 59.414 40.000 18.22 7.03 34.89 2.24
2163 2215 5.813717 TGTCAACGTCCGTATGATAGTAAG 58.186 41.667 0.00 0.00 0.00 2.34
2164 2216 5.210715 GTCAACGTCCGTATGATAGTAAGG 58.789 45.833 0.00 0.00 0.00 2.69
2176 2234 3.958147 TGATAGTAAGGGCTCGTGAATCA 59.042 43.478 0.00 0.00 0.00 2.57
2180 2238 3.389329 AGTAAGGGCTCGTGAATCATGAT 59.611 43.478 5.53 1.18 0.00 2.45
2203 2261 1.939255 GGACCGGTTTGTAACAACGAA 59.061 47.619 9.42 0.00 0.00 3.85
2237 2332 1.226491 CGATCCCGACCGTGTGTAC 60.226 63.158 0.00 0.00 38.22 2.90
2240 2335 1.745087 GATCCCGACCGTGTGTACTAA 59.255 52.381 0.00 0.00 0.00 2.24
2241 2336 1.614996 TCCCGACCGTGTGTACTAAA 58.385 50.000 0.00 0.00 0.00 1.85
2243 2338 2.562298 TCCCGACCGTGTGTACTAAAAT 59.438 45.455 0.00 0.00 0.00 1.82
2245 2340 4.402155 TCCCGACCGTGTGTACTAAAATAT 59.598 41.667 0.00 0.00 0.00 1.28
2246 2341 4.505191 CCCGACCGTGTGTACTAAAATATG 59.495 45.833 0.00 0.00 0.00 1.78
2247 2342 5.104374 CCGACCGTGTGTACTAAAATATGT 58.896 41.667 0.00 0.00 0.00 2.29
2248 2343 5.577945 CCGACCGTGTGTACTAAAATATGTT 59.422 40.000 0.00 0.00 0.00 2.71
2249 2344 6.091169 CCGACCGTGTGTACTAAAATATGTTT 59.909 38.462 0.00 0.00 0.00 2.83
2250 2345 6.951530 CGACCGTGTGTACTAAAATATGTTTG 59.048 38.462 0.00 0.00 0.00 2.93
2272 2367 5.257262 TGTTATGGCAGCCAATTAGTGTTA 58.743 37.500 20.84 0.00 36.95 2.41
2275 2370 7.558081 TGTTATGGCAGCCAATTAGTGTTAATA 59.442 33.333 20.84 5.38 36.95 0.98
2277 2372 6.202516 TGGCAGCCAATTAGTGTTAATAAC 57.797 37.500 13.33 0.00 0.00 1.89
2278 2373 5.163703 TGGCAGCCAATTAGTGTTAATAACG 60.164 40.000 13.33 0.00 0.00 3.18
2279 2374 5.065474 GGCAGCCAATTAGTGTTAATAACGA 59.935 40.000 6.55 0.00 0.00 3.85
2280 2375 6.403855 GGCAGCCAATTAGTGTTAATAACGAA 60.404 38.462 6.55 0.00 0.00 3.85
2281 2376 7.024768 GCAGCCAATTAGTGTTAATAACGAAA 58.975 34.615 0.00 0.00 0.00 3.46
2283 2378 9.567848 CAGCCAATTAGTGTTAATAACGAAATT 57.432 29.630 0.00 2.43 0.00 1.82
2284 2379 9.783256 AGCCAATTAGTGTTAATAACGAAATTC 57.217 29.630 0.00 0.00 0.00 2.17
2297 2392 8.434870 AATAACGAAATTCAGAAATTGACGTG 57.565 30.769 0.00 0.00 42.32 4.49
2298 2393 5.666969 ACGAAATTCAGAAATTGACGTGA 57.333 34.783 0.00 0.00 41.97 4.35
2300 2395 5.082059 CGAAATTCAGAAATTGACGTGAGG 58.918 41.667 0.00 0.00 35.27 3.86
2313 2411 1.226603 GTGAGGATCCCGAACGACG 60.227 63.158 8.55 0.00 42.18 5.12
2327 2425 0.107214 ACGACGGGATTTGCCATGAT 60.107 50.000 0.00 0.00 38.95 2.45
2337 2435 5.221224 GGGATTTGCCATGATAAATCGAACA 60.221 40.000 19.40 0.00 41.77 3.18
2375 2473 7.621428 ATTTAGTTGATGTGAGGATGACAAG 57.379 36.000 0.00 0.00 34.53 3.16
2439 2537 7.893124 ATTGAAGAGGAATTGACATGCTTAT 57.107 32.000 0.00 0.00 0.00 1.73
2448 2546 9.193806 AGGAATTGACATGCTTATCAACTAAAT 57.806 29.630 0.00 0.00 37.64 1.40
2452 2550 8.464770 TTGACATGCTTATCAACTAAATTTGC 57.535 30.769 0.00 0.00 29.89 3.68
2461 2559 4.023291 TCAACTAAATTTGCCATCCCTCC 58.977 43.478 0.00 0.00 0.00 4.30
2462 2560 4.026052 CAACTAAATTTGCCATCCCTCCT 58.974 43.478 0.00 0.00 0.00 3.69
2463 2561 3.635591 ACTAAATTTGCCATCCCTCCTG 58.364 45.455 0.00 0.00 0.00 3.86
2522 2620 4.460948 GGTAAATCCCAGACGTACAAGA 57.539 45.455 0.00 0.00 0.00 3.02
2532 2630 2.098770 AGACGTACAAGACTTATCGGCC 59.901 50.000 0.00 0.00 0.00 6.13
2534 2632 2.494870 ACGTACAAGACTTATCGGCCTT 59.505 45.455 0.00 0.00 0.00 4.35
2538 2636 4.222124 ACAAGACTTATCGGCCTTCAAT 57.778 40.909 0.00 0.00 0.00 2.57
2543 2641 7.339466 ACAAGACTTATCGGCCTTCAATATTTT 59.661 33.333 0.00 0.00 0.00 1.82
2573 2671 9.153721 AGTGTTCATTATGCATAAATTTGGTTG 57.846 29.630 22.37 14.04 0.00 3.77
2574 2672 7.904461 GTGTTCATTATGCATAAATTTGGTTGC 59.096 33.333 22.37 12.85 35.67 4.17
2576 2674 6.647229 TCATTATGCATAAATTTGGTTGCCA 58.353 32.000 22.37 0.00 34.20 4.92
2577 2675 7.281098 TCATTATGCATAAATTTGGTTGCCAT 58.719 30.769 22.37 0.00 34.20 4.40
2578 2676 7.441760 TCATTATGCATAAATTTGGTTGCCATC 59.558 33.333 22.37 0.00 34.20 3.51
2579 2677 4.822685 TGCATAAATTTGGTTGCCATCT 57.177 36.364 15.57 0.00 34.20 2.90
2634 2732 6.363357 GCTATTCTTTGTGGTCAAATGACAAC 59.637 38.462 13.10 13.10 46.62 3.32
2636 2734 4.019858 TCTTTGTGGTCAAATGACAACCA 58.980 39.130 16.45 4.89 46.03 3.67
2649 2747 0.615850 ACAACCAAGGAGCTCTAGCC 59.384 55.000 14.64 0.00 43.38 3.93
2691 2789 6.718454 TTGTCAACCAACATTTTCTGTTTG 57.282 33.333 0.00 0.00 45.98 2.93
2693 2791 4.033932 GTCAACCAACATTTTCTGTTTGCC 59.966 41.667 0.00 0.00 45.98 4.52
2694 2792 3.902881 ACCAACATTTTCTGTTTGCCA 57.097 38.095 0.00 0.00 45.98 4.92
2695 2793 3.530535 ACCAACATTTTCTGTTTGCCAC 58.469 40.909 0.00 0.00 45.98 5.01
2696 2794 2.539274 CCAACATTTTCTGTTTGCCACG 59.461 45.455 0.00 0.00 45.98 4.94
2698 2796 1.068434 ACATTTTCTGTTTGCCACGGG 59.932 47.619 0.00 0.00 32.90 5.28
2784 2934 1.540363 GCTCCTCGAGTGTCCAAACAA 60.540 52.381 12.31 0.00 37.08 2.83
2800 2951 7.819415 TGTCCAAACAACACAATTTTTACATGA 59.181 29.630 0.00 0.00 30.70 3.07
2804 2955 9.649024 CAAACAACACAATTTTTACATGAATCC 57.351 29.630 0.00 0.00 0.00 3.01
2863 3026 8.627487 TTAATTCACTGTTCATCAAACACAAC 57.373 30.769 0.00 0.00 42.95 3.32
2867 3030 7.566760 TCACTGTTCATCAAACACAACTTAT 57.433 32.000 0.00 0.00 42.95 1.73
2885 3049 1.305219 ATGTGGCGATCAAACCGGTG 61.305 55.000 8.52 0.00 0.00 4.94
2889 3053 1.231958 GGCGATCAAACCGGTGAACA 61.232 55.000 8.52 0.00 0.00 3.18
2894 3058 3.666902 CGATCAAACCGGTGAACATGTTC 60.667 47.826 28.10 28.10 39.91 3.18
2920 3084 8.068892 AGAATCTAGTTCTGGACGAAACTTAT 57.931 34.615 6.74 0.00 45.38 1.73
2922 3086 7.648039 ATCTAGTTCTGGACGAAACTTATCT 57.352 36.000 0.00 0.00 32.41 1.98
2930 3095 7.218614 TCTGGACGAAACTTATCTGGTTTAAA 58.781 34.615 0.00 0.00 37.07 1.52
2955 3120 4.715534 TGAAGGACCAAATGTCTACCAA 57.284 40.909 0.00 0.00 43.89 3.67
2979 3144 2.258109 ACCTTGAGGGACCAAGTCTAC 58.742 52.381 1.54 0.00 41.34 2.59
2988 3153 3.146847 GGACCAAGTCTACACTTTTGGG 58.853 50.000 7.00 0.00 41.24 4.12
2995 3160 5.899631 AGTCTACACTTTTGGGGAACTTA 57.100 39.130 0.00 0.00 0.00 2.24
2997 3162 6.296803 AGTCTACACTTTTGGGGAACTTAAG 58.703 40.000 0.00 0.00 0.00 1.85
2999 3164 2.963101 ACACTTTTGGGGAACTTAAGGC 59.037 45.455 7.53 0.00 0.00 4.35
3000 3165 2.962421 CACTTTTGGGGAACTTAAGGCA 59.038 45.455 7.53 0.00 0.00 4.75
3001 3166 2.963101 ACTTTTGGGGAACTTAAGGCAC 59.037 45.455 7.53 0.00 0.00 5.01
3012 3177 5.924254 GGAACTTAAGGCACCAAAAACATAC 59.076 40.000 7.53 0.00 0.00 2.39
3018 3183 4.956085 AGGCACCAAAAACATACTTTTCC 58.044 39.130 0.00 0.00 0.00 3.13
3020 3185 4.443598 GGCACCAAAAACATACTTTTCCCA 60.444 41.667 0.00 0.00 0.00 4.37
3073 3542 7.912778 AGCCTGAAGATTCTAGTTATCTCTT 57.087 36.000 9.52 3.72 31.28 2.85
3080 3549 5.841783 AGATTCTAGTTATCTCTTGGGACCC 59.158 44.000 2.45 2.45 0.00 4.46
3093 3562 6.964086 TCTCTTGGGACCCCTTATATAATACC 59.036 42.308 8.45 0.00 36.94 2.73
3098 3567 7.992295 TGGGACCCCTTATATAATACCTTTTC 58.008 38.462 8.45 0.00 36.94 2.29
3128 3597 5.762179 TCCAGGCCATAGATAATACCTTG 57.238 43.478 5.01 0.00 0.00 3.61
3134 3603 5.013183 GGCCATAGATAATACCTTGTCCACT 59.987 44.000 0.00 0.00 0.00 4.00
3137 3606 6.931281 CCATAGATAATACCTTGTCCACTGTG 59.069 42.308 0.00 0.00 0.00 3.66
3139 3608 4.783227 AGATAATACCTTGTCCACTGTGGT 59.217 41.667 25.15 8.55 39.03 4.16
3152 3621 3.213506 CACTGTGGTGTCCAAAAGATGA 58.786 45.455 0.00 0.00 38.54 2.92
3153 3622 3.822735 CACTGTGGTGTCCAAAAGATGAT 59.177 43.478 0.00 0.00 38.54 2.45
3154 3623 4.074970 ACTGTGGTGTCCAAAAGATGATC 58.925 43.478 6.71 0.00 34.18 2.92
3155 3624 4.074259 CTGTGGTGTCCAAAAGATGATCA 58.926 43.478 0.00 0.00 34.18 2.92
3156 3625 4.665451 TGTGGTGTCCAAAAGATGATCAT 58.335 39.130 8.25 8.25 34.18 2.45
3157 3626 4.460034 TGTGGTGTCCAAAAGATGATCATG 59.540 41.667 14.30 0.00 34.18 3.07
3159 3628 4.945543 TGGTGTCCAAAAGATGATCATGAG 59.054 41.667 14.30 0.00 0.00 2.90
3161 3630 5.188434 GTGTCCAAAAGATGATCATGAGGA 58.812 41.667 14.30 9.64 0.00 3.71
3162 3631 5.649395 GTGTCCAAAAGATGATCATGAGGAA 59.351 40.000 14.30 2.27 0.00 3.36
3164 3633 6.720748 TGTCCAAAAGATGATCATGAGGAAAA 59.279 34.615 14.30 2.79 0.00 2.29
3166 3635 8.906867 GTCCAAAAGATGATCATGAGGAAAATA 58.093 33.333 14.30 0.00 0.00 1.40
3167 3636 8.906867 TCCAAAAGATGATCATGAGGAAAATAC 58.093 33.333 14.30 0.00 0.00 1.89
3168 3637 8.910944 CCAAAAGATGATCATGAGGAAAATACT 58.089 33.333 14.30 0.00 0.00 2.12
3172 3641 7.938715 AGATGATCATGAGGAAAATACTTTGC 58.061 34.615 14.30 0.00 33.30 3.68
3173 3642 7.778853 AGATGATCATGAGGAAAATACTTTGCT 59.221 33.333 14.30 0.00 45.01 3.91
3174 3643 7.707624 TGATCATGAGGAAAATACTTTGCTT 57.292 32.000 0.09 0.00 42.67 3.91
3175 3644 8.125978 TGATCATGAGGAAAATACTTTGCTTT 57.874 30.769 0.09 0.00 42.67 3.51
3176 3645 8.587608 TGATCATGAGGAAAATACTTTGCTTTT 58.412 29.630 0.09 0.00 42.67 2.27
3177 3646 8.767478 ATCATGAGGAAAATACTTTGCTTTTG 57.233 30.769 0.09 0.00 42.67 2.44
3178 3647 7.950512 TCATGAGGAAAATACTTTGCTTTTGA 58.049 30.769 0.00 0.00 42.67 2.69
3179 3648 7.867403 TCATGAGGAAAATACTTTGCTTTTGAC 59.133 33.333 0.00 0.00 42.67 3.18
3180 3649 7.106439 TGAGGAAAATACTTTGCTTTTGACA 57.894 32.000 0.00 0.00 42.67 3.58
3181 3650 7.551585 TGAGGAAAATACTTTGCTTTTGACAA 58.448 30.769 0.00 0.00 42.67 3.18
3182 3651 8.037758 TGAGGAAAATACTTTGCTTTTGACAAA 58.962 29.630 0.00 0.00 42.67 2.83
3183 3652 8.196802 AGGAAAATACTTTGCTTTTGACAAAC 57.803 30.769 0.00 0.00 39.98 2.93
3184 3653 7.279981 AGGAAAATACTTTGCTTTTGACAAACC 59.720 33.333 0.00 0.00 39.98 3.27
3185 3654 6.582437 AAATACTTTGCTTTTGACAAACCG 57.418 33.333 0.00 0.00 33.62 4.44
3186 3655 3.859411 ACTTTGCTTTTGACAAACCGA 57.141 38.095 0.00 0.00 33.62 4.69
3187 3656 3.507786 ACTTTGCTTTTGACAAACCGAC 58.492 40.909 0.00 0.00 33.62 4.79
3188 3657 3.057174 ACTTTGCTTTTGACAAACCGACA 60.057 39.130 0.00 0.00 33.62 4.35
3189 3658 2.553079 TGCTTTTGACAAACCGACAC 57.447 45.000 0.00 0.00 0.00 3.67
3190 3659 1.813178 TGCTTTTGACAAACCGACACA 59.187 42.857 0.00 0.00 0.00 3.72
3191 3660 2.425312 TGCTTTTGACAAACCGACACAT 59.575 40.909 0.00 0.00 0.00 3.21
3192 3661 3.628032 TGCTTTTGACAAACCGACACATA 59.372 39.130 0.00 0.00 0.00 2.29
3193 3662 3.972502 GCTTTTGACAAACCGACACATAC 59.027 43.478 0.00 0.00 0.00 2.39
3194 3663 3.863396 TTTGACAAACCGACACATACG 57.137 42.857 0.00 0.00 0.00 3.06
3195 3664 2.512485 TGACAAACCGACACATACGT 57.488 45.000 0.00 0.00 0.00 3.57
3196 3665 3.639716 TGACAAACCGACACATACGTA 57.360 42.857 0.00 0.00 0.00 3.57
3197 3666 3.974912 TGACAAACCGACACATACGTAA 58.025 40.909 0.00 0.00 0.00 3.18
3198 3667 4.558178 TGACAAACCGACACATACGTAAT 58.442 39.130 0.00 0.00 0.00 1.89
3199 3668 5.707931 TGACAAACCGACACATACGTAATA 58.292 37.500 0.00 0.00 0.00 0.98
3231 3700 0.176910 GAGCCTCCAAGCCTGTCTAC 59.823 60.000 0.00 0.00 0.00 2.59
3244 3713 3.127030 GCCTGTCTACCCAAAATTTCTCG 59.873 47.826 0.00 0.00 0.00 4.04
3245 3714 4.575885 CCTGTCTACCCAAAATTTCTCGA 58.424 43.478 0.00 0.00 0.00 4.04
3255 3724 7.722363 ACCCAAAATTTCTCGATTAAACAGTT 58.278 30.769 0.00 0.00 0.00 3.16
3265 3734 7.602753 TCTCGATTAAACAGTTCAAGATCTCA 58.397 34.615 0.00 0.00 0.00 3.27
3281 3750 4.702131 AGATCTCAAAAACCAATTCCTCGG 59.298 41.667 0.00 0.00 0.00 4.63
3291 3760 2.228822 CCAATTCCTCGGTGACCTTTTG 59.771 50.000 0.00 0.00 0.00 2.44
3328 3797 4.210331 ACTCAAGACAGCCAATGAACTTT 58.790 39.130 0.00 0.00 31.01 2.66
3331 3800 6.150140 ACTCAAGACAGCCAATGAACTTTATC 59.850 38.462 0.00 0.00 31.01 1.75
3340 3809 6.494835 AGCCAATGAACTTTATCAGGTCTTTT 59.505 34.615 0.00 0.00 40.39 2.27
3353 3822 3.507622 CAGGTCTTTTTCATCTCCCAACC 59.492 47.826 0.00 0.00 0.00 3.77
3394 3863 0.038166 ATGAGCATGAAACCCCGTGT 59.962 50.000 0.00 0.00 0.00 4.49
3401 3870 3.057174 GCATGAAACCCCGTGTGAAATTA 60.057 43.478 0.00 0.00 0.00 1.40
3402 3871 4.481463 CATGAAACCCCGTGTGAAATTAC 58.519 43.478 0.00 0.00 0.00 1.89
3403 3872 2.885894 TGAAACCCCGTGTGAAATTACC 59.114 45.455 0.00 0.00 0.00 2.85
3404 3873 1.913778 AACCCCGTGTGAAATTACCC 58.086 50.000 0.00 0.00 0.00 3.69
3405 3874 0.772384 ACCCCGTGTGAAATTACCCA 59.228 50.000 0.00 0.00 0.00 4.51
3406 3875 1.170442 CCCCGTGTGAAATTACCCAC 58.830 55.000 0.00 0.00 0.00 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 2.959071 GCCATCGTCGAGCAGCTC 60.959 66.667 12.94 12.94 0.00 4.09
16 17 3.456365 AGCCATCGTCGAGCAGCT 61.456 61.111 9.84 9.84 0.00 4.24
17 18 3.260483 CAGCCATCGTCGAGCAGC 61.260 66.667 8.91 7.40 0.00 5.25
18 19 1.588403 CTCAGCCATCGTCGAGCAG 60.588 63.158 8.91 1.49 0.00 4.24
19 20 2.491621 CTCAGCCATCGTCGAGCA 59.508 61.111 8.91 0.00 0.00 4.26
20 21 2.959071 GCTCAGCCATCGTCGAGC 60.959 66.667 0.00 0.00 43.60 5.03
31 32 4.933064 CGGTCGATCGGGCTCAGC 62.933 72.222 16.41 3.99 0.00 4.26
32 33 4.271816 CCGGTCGATCGGGCTCAG 62.272 72.222 29.63 1.81 45.78 3.35
39 40 4.266070 ACATCCGCCGGTCGATCG 62.266 66.667 12.09 12.09 41.67 3.69
40 41 2.658593 CACATCCGCCGGTCGATC 60.659 66.667 17.96 0.00 41.67 3.69
41 42 4.221422 CCACATCCGCCGGTCGAT 62.221 66.667 17.96 9.39 41.67 3.59
43 44 4.752879 AACCACATCCGCCGGTCG 62.753 66.667 1.63 7.37 38.08 4.79
44 45 3.124921 CAACCACATCCGCCGGTC 61.125 66.667 1.63 0.00 30.91 4.79
68 69 1.936436 TATCACCCGTCAACCGACCG 61.936 60.000 0.00 0.00 39.11 4.79
69 70 0.179119 CTATCACCCGTCAACCGACC 60.179 60.000 0.00 0.00 39.11 4.79
70 71 0.179119 CCTATCACCCGTCAACCGAC 60.179 60.000 0.00 0.00 39.56 4.79
71 72 1.952102 GCCTATCACCCGTCAACCGA 61.952 60.000 0.00 0.00 39.56 4.69
72 73 1.520787 GCCTATCACCCGTCAACCG 60.521 63.158 0.00 0.00 0.00 4.44
73 74 0.035820 TTGCCTATCACCCGTCAACC 60.036 55.000 0.00 0.00 0.00 3.77
74 75 1.467342 GTTTGCCTATCACCCGTCAAC 59.533 52.381 0.00 0.00 0.00 3.18
75 76 1.816074 GTTTGCCTATCACCCGTCAA 58.184 50.000 0.00 0.00 0.00 3.18
76 77 0.390603 CGTTTGCCTATCACCCGTCA 60.391 55.000 0.00 0.00 0.00 4.35
77 78 1.702491 GCGTTTGCCTATCACCCGTC 61.702 60.000 0.00 0.00 33.98 4.79
78 79 1.743995 GCGTTTGCCTATCACCCGT 60.744 57.895 0.00 0.00 33.98 5.28
79 80 3.098555 GCGTTTGCCTATCACCCG 58.901 61.111 0.00 0.00 33.98 5.28
89 90 3.491652 GCTCCTCTCGGCGTTTGC 61.492 66.667 6.85 0.56 41.71 3.68
90 91 2.048222 TGCTCCTCTCGGCGTTTG 60.048 61.111 6.85 0.00 0.00 2.93
91 92 2.262915 CTGCTCCTCTCGGCGTTT 59.737 61.111 6.85 0.00 0.00 3.60
92 93 3.764466 CCTGCTCCTCTCGGCGTT 61.764 66.667 6.85 0.00 0.00 4.84
93 94 4.742649 TCCTGCTCCTCTCGGCGT 62.743 66.667 6.85 0.00 0.00 5.68
94 95 4.200283 GTCCTGCTCCTCTCGGCG 62.200 72.222 0.00 0.00 0.00 6.46
95 96 1.109920 TATGTCCTGCTCCTCTCGGC 61.110 60.000 0.00 0.00 0.00 5.54
96 97 0.671251 GTATGTCCTGCTCCTCTCGG 59.329 60.000 0.00 0.00 0.00 4.63
97 98 0.671251 GGTATGTCCTGCTCCTCTCG 59.329 60.000 0.00 0.00 0.00 4.04
98 99 0.671251 CGGTATGTCCTGCTCCTCTC 59.329 60.000 0.00 0.00 0.00 3.20
99 100 1.395826 GCGGTATGTCCTGCTCCTCT 61.396 60.000 0.00 0.00 34.60 3.69
100 101 1.068250 GCGGTATGTCCTGCTCCTC 59.932 63.158 0.00 0.00 34.60 3.71
101 102 2.435693 GGCGGTATGTCCTGCTCCT 61.436 63.158 0.00 0.00 36.50 3.69
102 103 2.109181 GGCGGTATGTCCTGCTCC 59.891 66.667 0.00 0.00 36.50 4.70
103 104 1.227380 CTGGCGGTATGTCCTGCTC 60.227 63.158 0.00 0.00 36.50 4.26
104 105 2.735772 CCTGGCGGTATGTCCTGCT 61.736 63.158 0.00 0.00 36.50 4.24
105 106 2.203070 CCTGGCGGTATGTCCTGC 60.203 66.667 0.00 0.00 35.89 4.85
106 107 2.203070 GCCTGGCGGTATGTCCTG 60.203 66.667 1.35 0.00 0.00 3.86
121 122 4.766088 CAAAAGCTCTGCGCCGCC 62.766 66.667 6.63 0.00 40.39 6.13
122 123 3.657835 CTCAAAAGCTCTGCGCCGC 62.658 63.158 4.18 0.00 40.39 6.53
123 124 2.477845 CTCAAAAGCTCTGCGCCG 59.522 61.111 4.18 0.00 40.39 6.46
124 125 1.968540 ACCTCAAAAGCTCTGCGCC 60.969 57.895 4.18 0.00 40.39 6.53
125 126 1.208614 CACCTCAAAAGCTCTGCGC 59.791 57.895 0.00 0.00 39.57 6.09
126 127 0.603707 TCCACCTCAAAAGCTCTGCG 60.604 55.000 0.00 0.00 0.00 5.18
127 128 1.471684 CATCCACCTCAAAAGCTCTGC 59.528 52.381 0.00 0.00 0.00 4.26
128 129 1.471684 GCATCCACCTCAAAAGCTCTG 59.528 52.381 0.00 0.00 0.00 3.35
129 130 1.831580 GCATCCACCTCAAAAGCTCT 58.168 50.000 0.00 0.00 0.00 4.09
130 131 0.449388 CGCATCCACCTCAAAAGCTC 59.551 55.000 0.00 0.00 0.00 4.09
131 132 1.589716 GCGCATCCACCTCAAAAGCT 61.590 55.000 0.30 0.00 0.00 3.74
132 133 1.153958 GCGCATCCACCTCAAAAGC 60.154 57.895 0.30 0.00 0.00 3.51
133 134 1.135315 CGCGCATCCACCTCAAAAG 59.865 57.895 8.75 0.00 0.00 2.27
134 135 2.331893 CCGCGCATCCACCTCAAAA 61.332 57.895 8.75 0.00 0.00 2.44
135 136 2.745884 CCGCGCATCCACCTCAAA 60.746 61.111 8.75 0.00 0.00 2.69
136 137 3.545124 AACCGCGCATCCACCTCAA 62.545 57.895 8.75 0.00 0.00 3.02
137 138 3.950794 GAACCGCGCATCCACCTCA 62.951 63.158 8.75 0.00 0.00 3.86
138 139 3.195698 GAACCGCGCATCCACCTC 61.196 66.667 8.75 0.00 0.00 3.85
139 140 3.958147 CTGAACCGCGCATCCACCT 62.958 63.158 8.75 0.00 0.00 4.00
140 141 3.499737 CTGAACCGCGCATCCACC 61.500 66.667 8.75 0.00 0.00 4.61
141 142 2.740714 GACTGAACCGCGCATCCAC 61.741 63.158 8.75 0.00 0.00 4.02
142 143 2.434185 GACTGAACCGCGCATCCA 60.434 61.111 8.75 0.00 0.00 3.41
143 144 3.554692 CGACTGAACCGCGCATCC 61.555 66.667 8.75 0.00 0.00 3.51
144 145 2.789203 GACGACTGAACCGCGCATC 61.789 63.158 8.75 2.66 0.00 3.91
145 146 2.809601 GACGACTGAACCGCGCAT 60.810 61.111 8.75 0.00 0.00 4.73
148 149 3.164011 GTCGACGACTGAACCGCG 61.164 66.667 20.52 0.00 0.00 6.46
149 150 1.210545 TTTGTCGACGACTGAACCGC 61.211 55.000 26.86 0.20 33.15 5.68
150 151 1.385743 GATTTGTCGACGACTGAACCG 59.614 52.381 26.86 0.00 33.15 4.44
151 152 2.400399 TGATTTGTCGACGACTGAACC 58.600 47.619 26.86 14.22 33.15 3.62
152 153 3.661936 GCTTGATTTGTCGACGACTGAAC 60.662 47.826 26.86 16.27 33.15 3.18
153 154 2.475111 GCTTGATTTGTCGACGACTGAA 59.525 45.455 26.86 20.80 33.15 3.02
154 155 2.058798 GCTTGATTTGTCGACGACTGA 58.941 47.619 26.86 16.22 33.15 3.41
155 156 1.126846 GGCTTGATTTGTCGACGACTG 59.873 52.381 26.86 10.38 33.15 3.51
156 157 1.270094 TGGCTTGATTTGTCGACGACT 60.270 47.619 26.86 8.73 33.15 4.18
157 158 1.144969 TGGCTTGATTTGTCGACGAC 58.855 50.000 20.97 20.97 0.00 4.34
158 159 1.872388 TTGGCTTGATTTGTCGACGA 58.128 45.000 11.62 6.16 0.00 4.20
159 160 2.679355 TTTGGCTTGATTTGTCGACG 57.321 45.000 11.62 0.00 0.00 5.12
160 161 3.121778 GCATTTTGGCTTGATTTGTCGAC 59.878 43.478 9.11 9.11 0.00 4.20
161 162 3.316283 GCATTTTGGCTTGATTTGTCGA 58.684 40.909 0.00 0.00 0.00 4.20
162 163 2.090967 CGCATTTTGGCTTGATTTGTCG 59.909 45.455 0.00 0.00 0.00 4.35
163 164 3.316283 TCGCATTTTGGCTTGATTTGTC 58.684 40.909 0.00 0.00 0.00 3.18
164 165 3.383620 TCGCATTTTGGCTTGATTTGT 57.616 38.095 0.00 0.00 0.00 2.83
165 166 3.062909 CCATCGCATTTTGGCTTGATTTG 59.937 43.478 0.00 0.00 0.00 2.32
166 167 3.264104 CCATCGCATTTTGGCTTGATTT 58.736 40.909 0.00 0.00 0.00 2.17
167 168 2.896168 CCATCGCATTTTGGCTTGATT 58.104 42.857 0.00 0.00 0.00 2.57
168 169 2.589798 CCATCGCATTTTGGCTTGAT 57.410 45.000 0.00 0.00 0.00 2.57
193 194 3.282374 ATTCAACTCACCCCGGCCC 62.282 63.158 0.00 0.00 0.00 5.80
194 195 1.749258 GATTCAACTCACCCCGGCC 60.749 63.158 0.00 0.00 0.00 6.13
195 196 1.749258 GGATTCAACTCACCCCGGC 60.749 63.158 0.00 0.00 0.00 6.13
196 197 1.449601 CGGATTCAACTCACCCCGG 60.450 63.158 0.00 0.00 33.94 5.73
197 198 1.449601 CCGGATTCAACTCACCCCG 60.450 63.158 0.00 0.00 36.98 5.73
198 199 1.749258 GCCGGATTCAACTCACCCC 60.749 63.158 5.05 0.00 0.00 4.95
199 200 2.106683 CGCCGGATTCAACTCACCC 61.107 63.158 5.05 0.00 0.00 4.61
200 201 1.359459 GACGCCGGATTCAACTCACC 61.359 60.000 5.05 0.00 0.00 4.02
201 202 1.683790 CGACGCCGGATTCAACTCAC 61.684 60.000 5.05 0.00 0.00 3.51
202 203 1.445410 CGACGCCGGATTCAACTCA 60.445 57.895 5.05 0.00 0.00 3.41
203 204 3.384927 CGACGCCGGATTCAACTC 58.615 61.111 5.05 0.00 0.00 3.01
218 219 1.665264 TTTATGCCCGTCGCTACCGA 61.665 55.000 0.00 0.00 42.01 4.69
219 220 0.599204 ATTTATGCCCGTCGCTACCG 60.599 55.000 0.00 0.00 38.78 4.02
220 221 0.865769 CATTTATGCCCGTCGCTACC 59.134 55.000 0.00 0.00 38.78 3.18
221 222 1.260561 CACATTTATGCCCGTCGCTAC 59.739 52.381 0.00 0.00 38.78 3.58
222 223 1.134640 ACACATTTATGCCCGTCGCTA 60.135 47.619 0.00 0.00 38.78 4.26
223 224 0.392461 ACACATTTATGCCCGTCGCT 60.392 50.000 0.00 0.00 38.78 4.93
224 225 0.450184 AACACATTTATGCCCGTCGC 59.550 50.000 0.00 0.00 38.31 5.19
225 226 1.735018 TCAACACATTTATGCCCGTCG 59.265 47.619 0.00 0.00 0.00 5.12
226 227 4.370364 AATCAACACATTTATGCCCGTC 57.630 40.909 0.00 0.00 0.00 4.79
227 228 4.799564 AAATCAACACATTTATGCCCGT 57.200 36.364 0.00 0.00 0.00 5.28
228 229 7.769272 ATTAAAATCAACACATTTATGCCCG 57.231 32.000 0.00 0.00 0.00 6.13
257 258 9.214957 CCGCTATTTGACATAATCCACTATTTA 57.785 33.333 0.00 0.00 0.00 1.40
258 259 7.308589 GCCGCTATTTGACATAATCCACTATTT 60.309 37.037 0.00 0.00 0.00 1.40
259 260 6.149474 GCCGCTATTTGACATAATCCACTATT 59.851 38.462 0.00 0.00 0.00 1.73
260 261 5.643777 GCCGCTATTTGACATAATCCACTAT 59.356 40.000 0.00 0.00 0.00 2.12
261 262 4.994852 GCCGCTATTTGACATAATCCACTA 59.005 41.667 0.00 0.00 0.00 2.74
262 263 3.815401 GCCGCTATTTGACATAATCCACT 59.185 43.478 0.00 0.00 0.00 4.00
263 264 3.363970 CGCCGCTATTTGACATAATCCAC 60.364 47.826 0.00 0.00 0.00 4.02
264 265 2.805671 CGCCGCTATTTGACATAATCCA 59.194 45.455 0.00 0.00 0.00 3.41
265 266 2.159627 CCGCCGCTATTTGACATAATCC 59.840 50.000 0.00 0.00 0.00 3.01
266 267 3.064207 TCCGCCGCTATTTGACATAATC 58.936 45.455 0.00 0.00 0.00 1.75
267 268 2.806244 GTCCGCCGCTATTTGACATAAT 59.194 45.455 0.00 0.00 0.00 1.28
268 269 2.159014 AGTCCGCCGCTATTTGACATAA 60.159 45.455 0.00 0.00 0.00 1.90
269 270 1.411246 AGTCCGCCGCTATTTGACATA 59.589 47.619 0.00 0.00 0.00 2.29
270 271 0.178068 AGTCCGCCGCTATTTGACAT 59.822 50.000 0.00 0.00 0.00 3.06
271 272 0.036765 AAGTCCGCCGCTATTTGACA 60.037 50.000 0.00 0.00 0.00 3.58
272 273 1.062148 GAAAGTCCGCCGCTATTTGAC 59.938 52.381 0.00 0.00 0.00 3.18
273 274 1.338294 TGAAAGTCCGCCGCTATTTGA 60.338 47.619 0.00 0.00 0.00 2.69
274 275 1.083489 TGAAAGTCCGCCGCTATTTG 58.917 50.000 0.00 0.00 0.00 2.32
275 276 1.816074 TTGAAAGTCCGCCGCTATTT 58.184 45.000 0.00 0.00 0.00 1.40
276 277 1.816074 TTTGAAAGTCCGCCGCTATT 58.184 45.000 0.00 0.00 0.00 1.73
277 278 1.940613 GATTTGAAAGTCCGCCGCTAT 59.059 47.619 0.00 0.00 0.00 2.97
278 279 1.338294 TGATTTGAAAGTCCGCCGCTA 60.338 47.619 0.00 0.00 0.00 4.26
279 280 0.605319 TGATTTGAAAGTCCGCCGCT 60.605 50.000 0.00 0.00 0.00 5.52
280 281 0.179189 CTGATTTGAAAGTCCGCCGC 60.179 55.000 0.00 0.00 0.00 6.53
281 282 0.179189 GCTGATTTGAAAGTCCGCCG 60.179 55.000 0.00 0.00 0.00 6.46
282 283 1.168714 AGCTGATTTGAAAGTCCGCC 58.831 50.000 0.00 0.00 0.00 6.13
283 284 4.319118 GCTATAGCTGATTTGAAAGTCCGC 60.319 45.833 17.75 0.00 38.21 5.54
284 285 4.811024 TGCTATAGCTGATTTGAAAGTCCG 59.189 41.667 24.61 0.00 42.66 4.79
285 286 6.683974 TTGCTATAGCTGATTTGAAAGTCC 57.316 37.500 24.61 0.00 42.66 3.85
286 287 7.756558 ACTTTGCTATAGCTGATTTGAAAGTC 58.243 34.615 24.61 0.00 42.66 3.01
287 288 7.693969 ACTTTGCTATAGCTGATTTGAAAGT 57.306 32.000 24.61 23.05 42.66 2.66
291 292 8.993121 GCTATAACTTTGCTATAGCTGATTTGA 58.007 33.333 24.61 6.27 45.70 2.69
300 301 6.346919 CGTTGCCTGCTATAACTTTGCTATAG 60.347 42.308 0.00 0.00 33.99 1.31
301 302 5.465390 CGTTGCCTGCTATAACTTTGCTATA 59.535 40.000 0.00 0.00 0.00 1.31
302 303 4.273480 CGTTGCCTGCTATAACTTTGCTAT 59.727 41.667 0.00 0.00 0.00 2.97
303 304 3.621268 CGTTGCCTGCTATAACTTTGCTA 59.379 43.478 0.00 0.00 0.00 3.49
304 305 2.420022 CGTTGCCTGCTATAACTTTGCT 59.580 45.455 0.00 0.00 0.00 3.91
305 306 2.418628 TCGTTGCCTGCTATAACTTTGC 59.581 45.455 0.00 0.00 0.00 3.68
306 307 4.496341 CCATCGTTGCCTGCTATAACTTTG 60.496 45.833 0.00 0.00 0.00 2.77
307 308 3.627577 CCATCGTTGCCTGCTATAACTTT 59.372 43.478 0.00 0.00 0.00 2.66
308 309 3.206150 CCATCGTTGCCTGCTATAACTT 58.794 45.455 0.00 0.00 0.00 2.66
309 310 2.838736 CCATCGTTGCCTGCTATAACT 58.161 47.619 0.00 0.00 0.00 2.24
310 311 1.264288 GCCATCGTTGCCTGCTATAAC 59.736 52.381 0.00 0.00 0.00 1.89
311 312 1.134250 TGCCATCGTTGCCTGCTATAA 60.134 47.619 0.00 0.00 0.00 0.98
312 313 0.467804 TGCCATCGTTGCCTGCTATA 59.532 50.000 0.00 0.00 0.00 1.31
313 314 0.394216 TTGCCATCGTTGCCTGCTAT 60.394 50.000 0.00 0.00 0.00 2.97
314 315 1.002746 TTGCCATCGTTGCCTGCTA 60.003 52.632 0.00 0.00 0.00 3.49
315 316 2.282391 TTGCCATCGTTGCCTGCT 60.282 55.556 0.00 0.00 0.00 4.24
316 317 1.865788 TTCTTGCCATCGTTGCCTGC 61.866 55.000 0.00 0.00 0.00 4.85
317 318 0.169672 CTTCTTGCCATCGTTGCCTG 59.830 55.000 0.00 0.00 0.00 4.85
318 319 0.250901 ACTTCTTGCCATCGTTGCCT 60.251 50.000 0.00 0.00 0.00 4.75
319 320 0.109597 CACTTCTTGCCATCGTTGCC 60.110 55.000 0.00 0.00 0.00 4.52
320 321 0.874390 TCACTTCTTGCCATCGTTGC 59.126 50.000 0.00 0.00 0.00 4.17
321 322 2.222886 CGATCACTTCTTGCCATCGTTG 60.223 50.000 0.00 0.00 33.29 4.10
322 323 2.002586 CGATCACTTCTTGCCATCGTT 58.997 47.619 0.00 0.00 33.29 3.85
323 324 1.645034 CGATCACTTCTTGCCATCGT 58.355 50.000 0.00 0.00 33.29 3.73
324 325 0.933097 CCGATCACTTCTTGCCATCG 59.067 55.000 0.00 0.00 36.85 3.84
325 326 2.315925 TCCGATCACTTCTTGCCATC 57.684 50.000 0.00 0.00 0.00 3.51
326 327 2.804572 CGATCCGATCACTTCTTGCCAT 60.805 50.000 9.07 0.00 0.00 4.40
327 328 1.471501 CGATCCGATCACTTCTTGCCA 60.472 52.381 9.07 0.00 0.00 4.92
328 329 1.202417 TCGATCCGATCACTTCTTGCC 60.202 52.381 9.07 0.00 0.00 4.52
329 330 2.209838 TCGATCCGATCACTTCTTGC 57.790 50.000 9.07 0.00 0.00 4.01
330 331 3.549471 CACTTCGATCCGATCACTTCTTG 59.451 47.826 9.07 0.00 35.23 3.02
331 332 3.429547 CCACTTCGATCCGATCACTTCTT 60.430 47.826 9.07 0.00 35.23 2.52
332 333 2.099921 CCACTTCGATCCGATCACTTCT 59.900 50.000 9.07 0.00 35.23 2.85
333 334 2.464865 CCACTTCGATCCGATCACTTC 58.535 52.381 9.07 0.00 35.23 3.01
334 335 1.137086 CCCACTTCGATCCGATCACTT 59.863 52.381 9.07 0.00 35.23 3.16
335 336 0.747255 CCCACTTCGATCCGATCACT 59.253 55.000 9.07 0.00 35.23 3.41
336 337 0.249489 CCCCACTTCGATCCGATCAC 60.249 60.000 9.07 0.00 35.23 3.06
337 338 0.396556 TCCCCACTTCGATCCGATCA 60.397 55.000 9.07 0.00 35.23 2.92
338 339 0.315568 CTCCCCACTTCGATCCGATC 59.684 60.000 0.00 0.00 35.23 3.69
339 340 1.115930 CCTCCCCACTTCGATCCGAT 61.116 60.000 0.00 0.00 35.23 4.18
340 341 1.756950 CCTCCCCACTTCGATCCGA 60.757 63.158 0.00 0.00 0.00 4.55
341 342 1.739338 CTCCTCCCCACTTCGATCCG 61.739 65.000 0.00 0.00 0.00 4.18
342 343 2.034048 GCTCCTCCCCACTTCGATCC 62.034 65.000 0.00 0.00 0.00 3.36
343 344 1.443828 GCTCCTCCCCACTTCGATC 59.556 63.158 0.00 0.00 0.00 3.69
344 345 2.427245 CGCTCCTCCCCACTTCGAT 61.427 63.158 0.00 0.00 0.00 3.59
345 346 3.068691 CGCTCCTCCCCACTTCGA 61.069 66.667 0.00 0.00 0.00 3.71
346 347 4.821589 GCGCTCCTCCCCACTTCG 62.822 72.222 0.00 0.00 0.00 3.79
347 348 4.821589 CGCGCTCCTCCCCACTTC 62.822 72.222 5.56 0.00 0.00 3.01
363 364 3.998672 ACCACGTAGCACCCACCG 61.999 66.667 0.00 0.00 0.00 4.94
364 365 2.358247 CACCACGTAGCACCCACC 60.358 66.667 0.00 0.00 0.00 4.61
365 366 1.666872 GACACCACGTAGCACCCAC 60.667 63.158 0.00 0.00 0.00 4.61
366 367 2.738480 GACACCACGTAGCACCCA 59.262 61.111 0.00 0.00 0.00 4.51
367 368 2.431942 CGACACCACGTAGCACCC 60.432 66.667 0.00 0.00 0.00 4.61
368 369 2.431942 CCGACACCACGTAGCACC 60.432 66.667 0.00 0.00 0.00 5.01
369 370 3.110178 GCCGACACCACGTAGCAC 61.110 66.667 0.00 0.00 0.00 4.40
370 371 4.710695 CGCCGACACCACGTAGCA 62.711 66.667 0.00 0.00 0.00 3.49
372 373 4.789075 CCCGCCGACACCACGTAG 62.789 72.222 0.00 0.00 0.00 3.51
388 389 4.388499 ATCGGCCACCACACGTCC 62.388 66.667 2.24 0.00 0.00 4.79
389 390 3.118454 CATCGGCCACCACACGTC 61.118 66.667 2.24 0.00 0.00 4.34
390 391 3.589654 CTCATCGGCCACCACACGT 62.590 63.158 2.24 0.00 0.00 4.49
391 392 2.815211 CTCATCGGCCACCACACG 60.815 66.667 2.24 0.00 0.00 4.49
392 393 1.741770 GTCTCATCGGCCACCACAC 60.742 63.158 2.24 0.00 0.00 3.82
393 394 1.763546 TTGTCTCATCGGCCACCACA 61.764 55.000 2.24 0.00 0.00 4.17
394 395 1.003839 TTGTCTCATCGGCCACCAC 60.004 57.895 2.24 0.00 0.00 4.16
395 396 1.296392 CTTGTCTCATCGGCCACCA 59.704 57.895 2.24 0.00 0.00 4.17
396 397 0.535335 TACTTGTCTCATCGGCCACC 59.465 55.000 2.24 0.00 0.00 4.61
397 398 2.604046 ATACTTGTCTCATCGGCCAC 57.396 50.000 2.24 0.00 0.00 5.01
398 399 4.262463 GGAATATACTTGTCTCATCGGCCA 60.262 45.833 2.24 0.00 0.00 5.36
399 400 4.246458 GGAATATACTTGTCTCATCGGCC 58.754 47.826 0.00 0.00 0.00 6.13
400 401 4.883083 TGGAATATACTTGTCTCATCGGC 58.117 43.478 0.00 0.00 0.00 5.54
401 402 6.986817 ACTTTGGAATATACTTGTCTCATCGG 59.013 38.462 0.00 0.00 0.00 4.18
402 403 7.096436 CGACTTTGGAATATACTTGTCTCATCG 60.096 40.741 0.00 0.00 0.00 3.84
403 404 7.169982 CCGACTTTGGAATATACTTGTCTCATC 59.830 40.741 0.00 0.00 0.00 2.92
404 405 6.986817 CCGACTTTGGAATATACTTGTCTCAT 59.013 38.462 0.00 0.00 0.00 2.90
405 406 6.070995 ACCGACTTTGGAATATACTTGTCTCA 60.071 38.462 0.00 0.00 0.00 3.27
406 407 6.255887 CACCGACTTTGGAATATACTTGTCTC 59.744 42.308 0.00 0.00 0.00 3.36
407 408 6.106673 CACCGACTTTGGAATATACTTGTCT 58.893 40.000 0.00 0.00 0.00 3.41
408 409 5.220605 GCACCGACTTTGGAATATACTTGTC 60.221 44.000 0.00 0.00 0.00 3.18
409 410 4.634443 GCACCGACTTTGGAATATACTTGT 59.366 41.667 0.00 0.00 0.00 3.16
410 411 4.634004 TGCACCGACTTTGGAATATACTTG 59.366 41.667 0.00 0.00 0.00 3.16
411 412 4.839121 TGCACCGACTTTGGAATATACTT 58.161 39.130 0.00 0.00 0.00 2.24
412 413 4.442706 CTGCACCGACTTTGGAATATACT 58.557 43.478 0.00 0.00 0.00 2.12
413 414 3.002348 GCTGCACCGACTTTGGAATATAC 59.998 47.826 0.00 0.00 0.00 1.47
414 415 3.118408 AGCTGCACCGACTTTGGAATATA 60.118 43.478 1.02 0.00 0.00 0.86
415 416 2.017049 GCTGCACCGACTTTGGAATAT 58.983 47.619 0.00 0.00 0.00 1.28
416 417 1.003118 AGCTGCACCGACTTTGGAATA 59.997 47.619 1.02 0.00 0.00 1.75
417 418 0.250901 AGCTGCACCGACTTTGGAAT 60.251 50.000 1.02 0.00 0.00 3.01
418 419 1.148273 AGCTGCACCGACTTTGGAA 59.852 52.632 1.02 0.00 0.00 3.53
419 420 1.597854 CAGCTGCACCGACTTTGGA 60.598 57.895 0.00 0.00 0.00 3.53
420 421 1.893808 ACAGCTGCACCGACTTTGG 60.894 57.895 15.27 0.00 0.00 3.28
421 422 1.280746 CACAGCTGCACCGACTTTG 59.719 57.895 15.27 0.00 0.00 2.77
422 423 1.893808 CCACAGCTGCACCGACTTT 60.894 57.895 15.27 0.00 0.00 2.66
423 424 2.281070 CCACAGCTGCACCGACTT 60.281 61.111 15.27 0.00 0.00 3.01
424 425 3.521529 GACCACAGCTGCACCGACT 62.522 63.158 15.27 0.00 0.00 4.18
425 426 2.154798 TAGACCACAGCTGCACCGAC 62.155 60.000 15.27 0.77 0.00 4.79
426 427 1.468506 TTAGACCACAGCTGCACCGA 61.469 55.000 15.27 0.00 0.00 4.69
427 428 0.391661 ATTAGACCACAGCTGCACCG 60.392 55.000 15.27 0.60 0.00 4.94
428 429 2.280628 GTATTAGACCACAGCTGCACC 58.719 52.381 15.27 0.37 0.00 5.01
439 440 5.338137 CCCAATCCCTTATCGGTATTAGACC 60.338 48.000 0.00 0.00 45.91 3.85
440 441 5.247792 ACCCAATCCCTTATCGGTATTAGAC 59.752 44.000 0.00 0.00 0.00 2.59
441 442 5.408824 ACCCAATCCCTTATCGGTATTAGA 58.591 41.667 0.00 0.00 0.00 2.10
442 443 5.757099 ACCCAATCCCTTATCGGTATTAG 57.243 43.478 0.00 0.00 0.00 1.73
443 444 5.722923 CCTACCCAATCCCTTATCGGTATTA 59.277 44.000 0.00 0.00 0.00 0.98
444 445 4.534897 CCTACCCAATCCCTTATCGGTATT 59.465 45.833 0.00 0.00 0.00 1.89
445 446 4.101856 CCTACCCAATCCCTTATCGGTAT 58.898 47.826 0.00 0.00 0.00 2.73
446 447 3.142597 TCCTACCCAATCCCTTATCGGTA 59.857 47.826 0.00 0.00 0.00 4.02
447 448 2.090380 TCCTACCCAATCCCTTATCGGT 60.090 50.000 0.00 0.00 0.00 4.69
448 449 2.616524 TCCTACCCAATCCCTTATCGG 58.383 52.381 0.00 0.00 0.00 4.18
449 450 3.554337 CGTTCCTACCCAATCCCTTATCG 60.554 52.174 0.00 0.00 0.00 2.92
450 451 3.244457 CCGTTCCTACCCAATCCCTTATC 60.244 52.174 0.00 0.00 0.00 1.75
451 452 2.709397 CCGTTCCTACCCAATCCCTTAT 59.291 50.000 0.00 0.00 0.00 1.73
452 453 2.121129 CCGTTCCTACCCAATCCCTTA 58.879 52.381 0.00 0.00 0.00 2.69
453 454 0.916809 CCGTTCCTACCCAATCCCTT 59.083 55.000 0.00 0.00 0.00 3.95
454 455 1.632965 GCCGTTCCTACCCAATCCCT 61.633 60.000 0.00 0.00 0.00 4.20
455 456 1.153025 GCCGTTCCTACCCAATCCC 60.153 63.158 0.00 0.00 0.00 3.85
456 457 0.255033 AAGCCGTTCCTACCCAATCC 59.745 55.000 0.00 0.00 0.00 3.01
457 458 2.433239 TCTAAGCCGTTCCTACCCAATC 59.567 50.000 0.00 0.00 0.00 2.67
458 459 2.474112 TCTAAGCCGTTCCTACCCAAT 58.526 47.619 0.00 0.00 0.00 3.16
459 460 1.941377 TCTAAGCCGTTCCTACCCAA 58.059 50.000 0.00 0.00 0.00 4.12
460 461 1.829222 CTTCTAAGCCGTTCCTACCCA 59.171 52.381 0.00 0.00 0.00 4.51
461 462 1.829849 ACTTCTAAGCCGTTCCTACCC 59.170 52.381 0.00 0.00 0.00 3.69
462 463 2.889852 CACTTCTAAGCCGTTCCTACC 58.110 52.381 0.00 0.00 0.00 3.18
463 464 2.269172 GCACTTCTAAGCCGTTCCTAC 58.731 52.381 0.00 0.00 0.00 3.18
464 465 1.897133 TGCACTTCTAAGCCGTTCCTA 59.103 47.619 0.00 0.00 0.00 2.94
465 466 0.685097 TGCACTTCTAAGCCGTTCCT 59.315 50.000 0.00 0.00 0.00 3.36
466 467 1.519408 TTGCACTTCTAAGCCGTTCC 58.481 50.000 0.00 0.00 0.00 3.62
467 468 3.003378 AGTTTTGCACTTCTAAGCCGTTC 59.997 43.478 0.00 0.00 27.32 3.95
468 469 2.949644 AGTTTTGCACTTCTAAGCCGTT 59.050 40.909 0.00 0.00 27.32 4.44
469 470 2.290641 CAGTTTTGCACTTCTAAGCCGT 59.709 45.455 0.00 0.00 30.92 5.68
470 471 2.548057 TCAGTTTTGCACTTCTAAGCCG 59.452 45.455 0.00 0.00 30.92 5.52
471 472 4.036852 AGTTCAGTTTTGCACTTCTAAGCC 59.963 41.667 0.00 0.00 30.92 4.35
472 473 5.175090 AGTTCAGTTTTGCACTTCTAAGC 57.825 39.130 0.00 0.00 30.92 3.09
473 474 9.736023 ATAAAAGTTCAGTTTTGCACTTCTAAG 57.264 29.630 3.07 0.00 39.39 2.18
475 476 9.730420 GAATAAAAGTTCAGTTTTGCACTTCTA 57.270 29.630 3.07 0.00 39.39 2.10
476 477 7.706607 GGAATAAAAGTTCAGTTTTGCACTTCT 59.293 33.333 3.07 0.00 39.39 2.85
477 478 7.706607 AGGAATAAAAGTTCAGTTTTGCACTTC 59.293 33.333 3.07 2.14 39.39 3.01
478 479 7.555965 AGGAATAAAAGTTCAGTTTTGCACTT 58.444 30.769 3.07 0.00 41.56 3.16
479 480 7.112452 AGGAATAAAAGTTCAGTTTTGCACT 57.888 32.000 3.07 0.00 31.89 4.40
480 481 6.142320 CGAGGAATAAAAGTTCAGTTTTGCAC 59.858 38.462 3.07 0.00 31.96 4.57
481 482 6.038825 TCGAGGAATAAAAGTTCAGTTTTGCA 59.961 34.615 3.07 0.00 31.96 4.08
482 483 6.435428 TCGAGGAATAAAAGTTCAGTTTTGC 58.565 36.000 3.07 0.00 31.96 3.68
483 484 8.850454 TTTCGAGGAATAAAAGTTCAGTTTTG 57.150 30.769 3.07 0.00 31.96 2.44
484 485 9.297586 GTTTTCGAGGAATAAAAGTTCAGTTTT 57.702 29.630 0.00 0.00 34.07 2.43
485 486 8.683615 AGTTTTCGAGGAATAAAAGTTCAGTTT 58.316 29.630 0.00 0.00 0.00 2.66
486 487 8.129211 CAGTTTTCGAGGAATAAAAGTTCAGTT 58.871 33.333 0.00 0.00 0.00 3.16
487 488 7.282450 ACAGTTTTCGAGGAATAAAAGTTCAGT 59.718 33.333 0.00 0.00 0.00 3.41
488 489 7.639945 ACAGTTTTCGAGGAATAAAAGTTCAG 58.360 34.615 0.00 0.00 0.00 3.02
489 490 7.562454 ACAGTTTTCGAGGAATAAAAGTTCA 57.438 32.000 0.00 0.00 0.00 3.18
494 495 9.169592 CCCTTATACAGTTTTCGAGGAATAAAA 57.830 33.333 0.00 0.00 0.00 1.52
495 496 8.542080 TCCCTTATACAGTTTTCGAGGAATAAA 58.458 33.333 0.00 0.00 0.00 1.40
496 497 8.081517 TCCCTTATACAGTTTTCGAGGAATAA 57.918 34.615 0.00 0.00 0.00 1.40
497 498 7.664552 TCCCTTATACAGTTTTCGAGGAATA 57.335 36.000 0.00 0.00 0.00 1.75
498 499 6.555463 TCCCTTATACAGTTTTCGAGGAAT 57.445 37.500 0.00 0.00 0.00 3.01
499 500 6.555463 ATCCCTTATACAGTTTTCGAGGAA 57.445 37.500 0.00 0.00 0.00 3.36
500 501 5.221185 CGATCCCTTATACAGTTTTCGAGGA 60.221 44.000 0.00 0.00 0.00 3.71
501 502 4.982916 CGATCCCTTATACAGTTTTCGAGG 59.017 45.833 0.00 0.00 0.00 4.63
502 503 4.982916 CCGATCCCTTATACAGTTTTCGAG 59.017 45.833 0.00 0.00 0.00 4.04
503 504 4.403432 ACCGATCCCTTATACAGTTTTCGA 59.597 41.667 0.00 0.00 0.00 3.71
504 505 4.690122 ACCGATCCCTTATACAGTTTTCG 58.310 43.478 0.00 0.00 0.00 3.46
505 506 5.667466 TGACCGATCCCTTATACAGTTTTC 58.333 41.667 0.00 0.00 0.00 2.29
506 507 5.424252 TCTGACCGATCCCTTATACAGTTTT 59.576 40.000 0.00 0.00 0.00 2.43
507 508 4.960469 TCTGACCGATCCCTTATACAGTTT 59.040 41.667 0.00 0.00 0.00 2.66
508 509 4.543689 TCTGACCGATCCCTTATACAGTT 58.456 43.478 0.00 0.00 0.00 3.16
509 510 4.180377 TCTGACCGATCCCTTATACAGT 57.820 45.455 0.00 0.00 0.00 3.55
510 511 4.827835 TCTTCTGACCGATCCCTTATACAG 59.172 45.833 0.00 0.00 0.00 2.74
511 512 4.800023 TCTTCTGACCGATCCCTTATACA 58.200 43.478 0.00 0.00 0.00 2.29
512 513 5.986501 ATCTTCTGACCGATCCCTTATAC 57.013 43.478 0.00 0.00 0.00 1.47
513 514 9.409918 CTATTATCTTCTGACCGATCCCTTATA 57.590 37.037 0.00 0.00 0.00 0.98
514 515 8.116669 TCTATTATCTTCTGACCGATCCCTTAT 58.883 37.037 0.00 0.00 0.00 1.73
515 516 7.393796 GTCTATTATCTTCTGACCGATCCCTTA 59.606 40.741 0.00 0.00 0.00 2.69
516 517 6.209788 GTCTATTATCTTCTGACCGATCCCTT 59.790 42.308 0.00 0.00 0.00 3.95
517 518 5.712917 GTCTATTATCTTCTGACCGATCCCT 59.287 44.000 0.00 0.00 0.00 4.20
518 519 5.105675 GGTCTATTATCTTCTGACCGATCCC 60.106 48.000 0.00 0.00 37.93 3.85
519 520 5.956642 GGTCTATTATCTTCTGACCGATCC 58.043 45.833 0.00 0.00 37.93 3.36
524 525 7.142680 CGAAAGAGGTCTATTATCTTCTGACC 58.857 42.308 0.00 0.00 45.31 4.02
525 526 7.646130 CACGAAAGAGGTCTATTATCTTCTGAC 59.354 40.741 0.00 0.00 32.21 3.51
526 527 7.682261 GCACGAAAGAGGTCTATTATCTTCTGA 60.682 40.741 0.00 0.00 32.21 3.27
527 528 6.419413 GCACGAAAGAGGTCTATTATCTTCTG 59.581 42.308 0.00 0.00 32.21 3.02
528 529 6.322712 AGCACGAAAGAGGTCTATTATCTTCT 59.677 38.462 0.00 0.00 32.21 2.85
529 530 6.508777 AGCACGAAAGAGGTCTATTATCTTC 58.491 40.000 0.00 0.00 32.21 2.87
530 531 6.472686 AGCACGAAAGAGGTCTATTATCTT 57.527 37.500 0.00 0.00 34.81 2.40
559 560 6.656314 TTAACTATGTCGTTTTCATCGCAT 57.344 33.333 0.00 0.00 0.00 4.73
562 563 8.615585 GTGTTTTTAACTATGTCGTTTTCATCG 58.384 33.333 0.00 0.00 0.00 3.84
565 566 9.493206 GAAGTGTTTTTAACTATGTCGTTTTCA 57.507 29.630 0.00 0.00 0.00 2.69
571 572 7.586300 CACAAGGAAGTGTTTTTAACTATGTCG 59.414 37.037 0.00 0.00 34.83 4.35
603 610 8.677148 TGGTGTTATTTCTAGATAAGCATTCC 57.323 34.615 0.00 0.00 0.00 3.01
622 629 1.059098 TGAGAGTCCATGCTGGTGTT 58.941 50.000 2.68 0.00 39.03 3.32
626 636 1.579698 CGAATGAGAGTCCATGCTGG 58.420 55.000 0.00 0.00 39.43 4.85
629 639 1.493950 CCGCGAATGAGAGTCCATGC 61.494 60.000 8.23 0.00 0.00 4.06
630 640 0.103026 TCCGCGAATGAGAGTCCATG 59.897 55.000 8.23 0.00 0.00 3.66
632 642 0.824109 ATTCCGCGAATGAGAGTCCA 59.176 50.000 8.23 0.00 30.42 4.02
646 656 3.694072 TGGTGGAGAAAAATAGCATTCCG 59.306 43.478 0.00 0.00 0.00 4.30
661 671 0.443869 CATTCGCGAAAGTGGTGGAG 59.556 55.000 27.23 3.71 43.13 3.86
662 672 0.250124 ACATTCGCGAAAGTGGTGGA 60.250 50.000 26.87 0.85 43.13 4.02
664 680 0.865111 TGACATTCGCGAAAGTGGTG 59.135 50.000 31.58 23.28 43.13 4.17
667 683 1.906966 GCAATGACATTCGCGAAAGTG 59.093 47.619 31.58 24.67 44.62 3.16
669 685 1.906966 GTGCAATGACATTCGCGAAAG 59.093 47.619 27.23 24.07 0.00 2.62
672 688 0.871057 TTGTGCAATGACATTCGCGA 59.129 45.000 3.71 3.71 0.00 5.87
675 691 2.592796 TCGTTGTGCAATGACATTCG 57.407 45.000 0.00 0.00 31.88 3.34
686 702 2.977054 CTTGCAAAGTTTCGTTGTGC 57.023 45.000 0.00 0.00 39.70 4.57
696 712 5.642919 TGAATTTTTCAAGTGCTTGCAAAGT 59.357 32.000 0.00 7.73 40.87 2.66
767 783 8.162245 GCCTGAGCAATAAAAAGAAAATTAACG 58.838 33.333 0.00 0.00 39.53 3.18
804 821 7.326140 AAAGTCCTCTTCTGCTCATGAGCAT 62.326 44.000 42.08 25.64 46.77 3.79
809 826 2.928757 CGAAAGTCCTCTTCTGCTCATG 59.071 50.000 0.00 0.00 32.90 3.07
810 827 2.676463 GCGAAAGTCCTCTTCTGCTCAT 60.676 50.000 0.00 0.00 33.71 2.90
811 828 1.337260 GCGAAAGTCCTCTTCTGCTCA 60.337 52.381 0.00 0.00 33.71 4.26
815 832 1.719600 CTGGCGAAAGTCCTCTTCTG 58.280 55.000 0.00 0.00 32.90 3.02
830 847 2.876368 ATCTGGGCGTTGTAGCTGGC 62.876 60.000 0.00 0.00 37.29 4.85
831 848 0.464036 TATCTGGGCGTTGTAGCTGG 59.536 55.000 0.00 0.00 37.29 4.85
840 857 2.041922 TGGGCTCTATCTGGGCGT 60.042 61.111 0.00 0.00 0.00 5.68
841 858 2.739784 CTGGGCTCTATCTGGGCG 59.260 66.667 0.00 0.00 0.00 6.13
842 859 2.394565 CTGCTGGGCTCTATCTGGGC 62.395 65.000 0.00 0.00 0.00 5.36
873 899 8.001881 TGATCATCTAGGTTAGTCAGTTTCTC 57.998 38.462 0.00 0.00 0.00 2.87
876 902 7.560368 CCTTGATCATCTAGGTTAGTCAGTTT 58.440 38.462 6.97 0.00 35.18 2.66
879 905 5.069648 TGCCTTGATCATCTAGGTTAGTCAG 59.930 44.000 15.62 0.00 40.73 3.51
885 911 2.743183 GCGTGCCTTGATCATCTAGGTT 60.743 50.000 15.62 0.00 40.73 3.50
886 912 1.202580 GCGTGCCTTGATCATCTAGGT 60.203 52.381 15.62 0.00 40.73 3.08
894 920 1.064060 GTATGTTGGCGTGCCTTGATC 59.936 52.381 12.84 0.00 36.94 2.92
911 937 0.624500 ATGGGAGTGTGCCTGGGTAT 60.625 55.000 0.00 0.00 0.00 2.73
915 941 0.033796 AATCATGGGAGTGTGCCTGG 60.034 55.000 0.00 0.00 0.00 4.45
916 942 1.100510 CAATCATGGGAGTGTGCCTG 58.899 55.000 0.00 0.00 34.54 4.85
918 944 0.966875 TGCAATCATGGGAGTGTGCC 60.967 55.000 0.00 0.00 41.06 5.01
919 945 0.171903 GTGCAATCATGGGAGTGTGC 59.828 55.000 0.00 0.00 41.06 4.57
922 948 1.135199 GCAAGTGCAATCATGGGAGTG 60.135 52.381 0.00 0.00 41.86 3.51
951 977 3.385755 GCTGGGCAGGATTATCATTTGTT 59.614 43.478 0.00 0.00 0.00 2.83
952 978 2.961062 GCTGGGCAGGATTATCATTTGT 59.039 45.455 0.00 0.00 0.00 2.83
953 979 2.030540 CGCTGGGCAGGATTATCATTTG 60.031 50.000 0.00 0.00 0.00 2.32
954 980 2.233271 CGCTGGGCAGGATTATCATTT 58.767 47.619 0.00 0.00 0.00 2.32
955 981 1.901591 CGCTGGGCAGGATTATCATT 58.098 50.000 0.00 0.00 0.00 2.57
956 982 0.607489 GCGCTGGGCAGGATTATCAT 60.607 55.000 12.19 0.00 42.87 2.45
957 983 1.227943 GCGCTGGGCAGGATTATCA 60.228 57.895 12.19 0.00 42.87 2.15
958 984 3.660621 GCGCTGGGCAGGATTATC 58.339 61.111 12.19 0.00 42.87 1.75
967 993 1.589716 AACTTCAATCTGCGCTGGGC 61.590 55.000 14.70 10.06 43.96 5.36
1033 1059 2.203337 GGTCAGCTGGGTTGCACA 60.203 61.111 15.13 0.00 34.99 4.57
1034 1060 1.589716 GATGGTCAGCTGGGTTGCAC 61.590 60.000 15.13 2.87 34.99 4.57
1066 1092 2.159114 GCAGTGGAGTCTCTGGAATCTC 60.159 54.545 14.27 0.00 36.85 2.75
1070 1096 1.423584 TTGCAGTGGAGTCTCTGGAA 58.576 50.000 14.58 14.58 40.64 3.53
1072 1098 1.406614 GGATTGCAGTGGAGTCTCTGG 60.407 57.143 7.08 0.00 35.64 3.86
1090 1116 2.308722 GGGTCAATGGGGAGCTGGA 61.309 63.158 0.00 0.00 35.67 3.86
1116 1153 3.733960 CGCGTCGTGGAGTCTCCA 61.734 66.667 18.15 18.15 45.98 3.86
1370 1407 3.541996 AGCATCGATGAATGTGGTACA 57.458 42.857 29.20 0.00 0.00 2.90
1424 1461 3.857052 CTTCACCTGCGTCCAGTAATAA 58.143 45.455 0.00 0.00 37.38 1.40
1425 1462 2.418197 GCTTCACCTGCGTCCAGTAATA 60.418 50.000 0.00 0.00 37.38 0.98
1427 1464 0.320421 GCTTCACCTGCGTCCAGTAA 60.320 55.000 0.00 0.00 37.38 2.24
1521 1570 2.272146 GACCACCATGGCGACCAT 59.728 61.111 13.04 5.65 46.37 3.55
1676 1725 2.106332 CCGGCCGTGTCCAGTATC 59.894 66.667 26.12 0.00 0.00 2.24
1677 1726 4.157120 GCCGGCCGTGTCCAGTAT 62.157 66.667 26.12 0.00 0.00 2.12
1995 2047 1.111116 ACCGTCCGTCAGGTCTTCAA 61.111 55.000 0.00 0.00 35.50 2.69
1996 2048 1.529948 ACCGTCCGTCAGGTCTTCA 60.530 57.895 0.00 0.00 35.50 3.02
1997 2049 1.080705 CACCGTCCGTCAGGTCTTC 60.081 63.158 0.00 0.00 39.00 2.87
2080 2132 1.474077 GAAAAGGTGCATGCCTAGTGG 59.526 52.381 16.68 0.00 38.03 4.00
2090 2142 1.608025 CCTCGCTACTGAAAAGGTGCA 60.608 52.381 0.00 0.00 0.00 4.57
2104 2156 0.904649 TTGGTGACATGATCCTCGCT 59.095 50.000 0.00 0.00 42.32 4.93
2107 2159 3.265791 GTGAGTTGGTGACATGATCCTC 58.734 50.000 0.00 0.00 42.32 3.71
2120 2172 2.810274 CAGACTTGACATGGTGAGTTGG 59.190 50.000 0.00 0.00 0.00 3.77
2121 2173 3.470709 ACAGACTTGACATGGTGAGTTG 58.529 45.455 0.00 2.48 0.00 3.16
2122 2174 3.134623 TGACAGACTTGACATGGTGAGTT 59.865 43.478 0.00 0.00 0.00 3.01
2123 2175 2.700371 TGACAGACTTGACATGGTGAGT 59.300 45.455 0.00 0.00 0.00 3.41
2124 2176 3.391506 TGACAGACTTGACATGGTGAG 57.608 47.619 0.00 0.00 0.00 3.51
2125 2177 3.466836 GTTGACAGACTTGACATGGTGA 58.533 45.455 0.00 0.00 0.00 4.02
2126 2178 2.221749 CGTTGACAGACTTGACATGGTG 59.778 50.000 0.00 0.00 0.00 4.17
2127 2179 2.158957 ACGTTGACAGACTTGACATGGT 60.159 45.455 0.00 0.00 0.00 3.55
2128 2180 2.476619 GACGTTGACAGACTTGACATGG 59.523 50.000 0.00 0.00 0.00 3.66
2129 2181 2.476619 GGACGTTGACAGACTTGACATG 59.523 50.000 0.00 0.00 0.00 3.21
2140 2192 5.220912 CCTTACTATCATACGGACGTTGACA 60.221 44.000 1.57 0.00 0.00 3.58
2153 2205 4.588951 TGATTCACGAGCCCTTACTATCAT 59.411 41.667 0.00 0.00 0.00 2.45
2162 2214 1.071385 GGATCATGATTCACGAGCCCT 59.929 52.381 10.14 0.00 0.00 5.19
2163 2215 1.517242 GGATCATGATTCACGAGCCC 58.483 55.000 10.14 0.00 0.00 5.19
2164 2216 1.143305 CGGATCATGATTCACGAGCC 58.857 55.000 14.48 6.95 31.79 4.70
2203 2261 0.178068 ATCGACGCCAGGCAAAGTAT 59.822 50.000 13.30 0.00 0.00 2.12
2237 2332 7.264221 TGGCTGCCATAACAAACATATTTTAG 58.736 34.615 19.30 0.00 0.00 1.85
2240 2335 5.674052 TGGCTGCCATAACAAACATATTT 57.326 34.783 19.30 0.00 0.00 1.40
2241 2336 5.674052 TTGGCTGCCATAACAAACATATT 57.326 34.783 24.03 0.00 31.53 1.28
2243 2338 5.674052 AATTGGCTGCCATAACAAACATA 57.326 34.783 24.03 3.18 31.53 2.29
2245 2340 4.526262 ACTAATTGGCTGCCATAACAAACA 59.474 37.500 24.03 4.87 31.53 2.83
2246 2341 4.864247 CACTAATTGGCTGCCATAACAAAC 59.136 41.667 24.03 0.00 31.53 2.93
2247 2342 4.526262 ACACTAATTGGCTGCCATAACAAA 59.474 37.500 24.03 6.57 31.53 2.83
2248 2343 4.085733 ACACTAATTGGCTGCCATAACAA 58.914 39.130 24.03 7.42 31.53 2.83
2249 2344 3.696045 ACACTAATTGGCTGCCATAACA 58.304 40.909 24.03 7.86 31.53 2.41
2250 2345 4.718940 AACACTAATTGGCTGCCATAAC 57.281 40.909 24.03 0.00 31.53 1.89
2272 2367 8.286800 TCACGTCAATTTCTGAATTTCGTTATT 58.713 29.630 8.23 0.00 39.21 1.40
2275 2370 6.055231 TCACGTCAATTTCTGAATTTCGTT 57.945 33.333 8.23 0.00 39.21 3.85
2277 2372 5.082059 CCTCACGTCAATTTCTGAATTTCG 58.918 41.667 0.00 0.00 35.22 3.46
2278 2373 6.241207 TCCTCACGTCAATTTCTGAATTTC 57.759 37.500 0.00 0.00 35.22 2.17
2279 2374 6.127897 GGATCCTCACGTCAATTTCTGAATTT 60.128 38.462 3.84 0.00 35.22 1.82
2280 2375 5.355350 GGATCCTCACGTCAATTTCTGAATT 59.645 40.000 3.84 0.00 35.22 2.17
2281 2376 4.878397 GGATCCTCACGTCAATTTCTGAAT 59.122 41.667 3.84 0.00 35.22 2.57
2283 2378 3.369471 GGGATCCTCACGTCAATTTCTGA 60.369 47.826 12.58 0.00 0.00 3.27
2284 2379 2.939103 GGGATCCTCACGTCAATTTCTG 59.061 50.000 12.58 0.00 0.00 3.02
2286 2381 1.933853 CGGGATCCTCACGTCAATTTC 59.066 52.381 12.58 0.00 38.72 2.17
2288 2383 1.191535 TCGGGATCCTCACGTCAATT 58.808 50.000 12.58 0.00 44.95 2.32
2292 2387 1.226603 CGTTCGGGATCCTCACGTC 60.227 63.158 12.58 4.61 44.95 4.34
2293 2388 1.676635 TCGTTCGGGATCCTCACGT 60.677 57.895 22.10 0.00 44.95 4.49
2295 2390 1.226603 CGTCGTTCGGGATCCTCAC 60.227 63.158 12.58 5.13 35.71 3.51
2296 2391 3.193757 CGTCGTTCGGGATCCTCA 58.806 61.111 12.58 0.00 35.71 3.86
2313 2411 5.221224 TGTTCGATTTATCATGGCAAATCCC 60.221 40.000 18.98 12.01 37.71 3.85
2346 2444 8.299570 GTCATCCTCACATCAACTAAATTTGTT 58.700 33.333 0.00 0.82 0.00 2.83
2351 2449 7.170965 ACTTGTCATCCTCACATCAACTAAAT 58.829 34.615 0.00 0.00 0.00 1.40
2361 2459 5.758296 GTCAACTAAACTTGTCATCCTCACA 59.242 40.000 0.00 0.00 0.00 3.58
2362 2460 5.758296 TGTCAACTAAACTTGTCATCCTCAC 59.242 40.000 0.00 0.00 0.00 3.51
2375 2473 1.332375 TGCCGTGCTTGTCAACTAAAC 59.668 47.619 0.00 0.00 0.00 2.01
2412 2510 6.395629 AGCATGTCAATTCCTCTTCAATTTG 58.604 36.000 0.00 0.00 0.00 2.32
2416 2514 6.885918 TGATAAGCATGTCAATTCCTCTTCAA 59.114 34.615 0.00 0.00 0.00 2.69
2417 2515 6.417258 TGATAAGCATGTCAATTCCTCTTCA 58.583 36.000 0.00 0.00 0.00 3.02
2419 2517 6.888632 AGTTGATAAGCATGTCAATTCCTCTT 59.111 34.615 4.41 0.00 38.66 2.85
2421 2519 6.690194 AGTTGATAAGCATGTCAATTCCTC 57.310 37.500 4.41 0.00 38.66 3.71
2422 2520 8.579850 TTTAGTTGATAAGCATGTCAATTCCT 57.420 30.769 4.41 0.77 38.66 3.36
2423 2521 9.807649 AATTTAGTTGATAAGCATGTCAATTCC 57.192 29.630 4.41 0.00 38.66 3.01
2430 2528 6.934056 TGGCAAATTTAGTTGATAAGCATGT 58.066 32.000 0.00 0.00 0.00 3.21
2439 2537 4.023291 GGAGGGATGGCAAATTTAGTTGA 58.977 43.478 0.00 0.00 0.00 3.18
2448 2546 6.523035 TTTATATACAGGAGGGATGGCAAA 57.477 37.500 0.00 0.00 0.00 3.68
2452 2550 5.888161 GGCAATTTATATACAGGAGGGATGG 59.112 44.000 0.00 0.00 0.00 3.51
2484 2582 7.508687 GGATTTACCCATGGCAAATCTAATTT 58.491 34.615 29.95 11.02 38.28 1.82
2485 2583 7.066307 GGATTTACCCATGGCAAATCTAATT 57.934 36.000 29.95 11.53 38.28 1.40
2486 2584 6.670695 GGATTTACCCATGGCAAATCTAAT 57.329 37.500 29.95 15.13 38.28 1.73
2503 2601 5.733620 AAGTCTTGTACGTCTGGGATTTA 57.266 39.130 0.00 0.00 0.00 1.40
2511 2609 2.098770 GGCCGATAAGTCTTGTACGTCT 59.901 50.000 0.00 0.00 0.00 4.18
2512 2610 2.098770 AGGCCGATAAGTCTTGTACGTC 59.901 50.000 0.00 0.00 0.00 4.34
2513 2611 2.097825 AGGCCGATAAGTCTTGTACGT 58.902 47.619 0.00 0.00 0.00 3.57
2515 2613 4.119442 TGAAGGCCGATAAGTCTTGTAC 57.881 45.455 0.00 0.00 0.00 2.90
2517 2615 3.695830 TTGAAGGCCGATAAGTCTTGT 57.304 42.857 0.00 0.00 0.00 3.16
2519 2617 7.881775 AAAATATTGAAGGCCGATAAGTCTT 57.118 32.000 0.00 0.00 0.00 3.01
2520 2618 7.881775 AAAAATATTGAAGGCCGATAAGTCT 57.118 32.000 0.00 0.00 0.00 3.24
2553 2651 6.922247 TGGCAACCAAATTTATGCATAATG 57.078 33.333 19.51 14.39 40.51 1.90
2595 2693 9.421806 CACAAAGAATAGCCAAATAACAATGAA 57.578 29.630 0.00 0.00 0.00 2.57
2634 2732 2.496899 TTTTGGCTAGAGCTCCTTGG 57.503 50.000 10.93 0.00 41.70 3.61
2693 2791 2.034066 ACATCCAAGGTGCCCGTG 59.966 61.111 1.17 1.17 32.93 4.94
2694 2792 2.351276 GACATCCAAGGTGCCCGT 59.649 61.111 0.00 0.00 0.00 5.28
2695 2793 2.438434 GGACATCCAAGGTGCCCG 60.438 66.667 0.00 0.00 35.64 6.13
2696 2794 2.763215 TGGACATCCAAGGTGCCC 59.237 61.111 0.00 0.00 44.35 5.36
2711 2809 4.386652 CGTGCAAATTTTCTCCATCTTTGG 59.613 41.667 0.00 0.00 45.15 3.28
2712 2810 5.221880 TCGTGCAAATTTTCTCCATCTTTG 58.778 37.500 0.00 0.00 0.00 2.77
2713 2811 5.452078 TCGTGCAAATTTTCTCCATCTTT 57.548 34.783 0.00 0.00 0.00 2.52
2715 2813 3.119708 GCTCGTGCAAATTTTCTCCATCT 60.120 43.478 4.26 0.00 39.41 2.90
2716 2814 3.174375 GCTCGTGCAAATTTTCTCCATC 58.826 45.455 4.26 0.00 39.41 3.51
2717 2815 3.221964 GCTCGTGCAAATTTTCTCCAT 57.778 42.857 4.26 0.00 39.41 3.41
2757 2907 1.153667 CACTCGAGGAGCTCTTGGC 60.154 63.158 18.41 0.00 42.19 4.52
2762 2912 0.603569 TTTGGACACTCGAGGAGCTC 59.396 55.000 18.41 4.71 32.04 4.09
2784 2934 6.744112 ACACGGATTCATGTAAAAATTGTGT 58.256 32.000 9.25 9.25 33.58 3.72
2863 3026 1.330521 CCGGTTTGATCGCCACATAAG 59.669 52.381 0.00 0.00 0.00 1.73
2867 3030 1.963855 CACCGGTTTGATCGCCACA 60.964 57.895 2.97 0.00 0.00 4.17
2872 3035 1.804151 ACATGTTCACCGGTTTGATCG 59.196 47.619 2.97 0.00 0.00 3.69
2874 3037 3.218453 TGAACATGTTCACCGGTTTGAT 58.782 40.909 32.36 0.00 43.90 2.57
2902 3066 4.283722 ACCAGATAAGTTTCGTCCAGAACT 59.716 41.667 0.00 0.00 38.83 3.01
2906 3070 7.429636 TTTAAACCAGATAAGTTTCGTCCAG 57.570 36.000 0.00 0.00 38.37 3.86
2910 3074 8.895737 TCAAGTTTTAAACCAGATAAGTTTCGT 58.104 29.630 4.01 0.00 38.37 3.85
2920 3084 5.511363 TGGTCCTTCAAGTTTTAAACCAGA 58.489 37.500 4.01 0.22 32.12 3.86
2922 3086 6.607004 TTTGGTCCTTCAAGTTTTAAACCA 57.393 33.333 4.01 0.00 33.91 3.67
2955 3120 3.052869 AGACTTGGTCCCTCAAGGTTTTT 60.053 43.478 9.06 0.00 46.04 1.94
2960 3125 2.028020 GTGTAGACTTGGTCCCTCAAGG 60.028 54.545 9.06 0.00 46.04 3.61
2966 3131 3.146847 CCAAAAGTGTAGACTTGGTCCC 58.853 50.000 5.96 0.00 41.87 4.46
2969 3134 2.781174 TCCCCAAAAGTGTAGACTTGGT 59.219 45.455 5.96 0.00 41.87 3.67
2979 3144 2.962421 TGCCTTAAGTTCCCCAAAAGTG 59.038 45.455 0.97 0.00 0.00 3.16
2988 3153 4.394439 TGTTTTTGGTGCCTTAAGTTCC 57.606 40.909 0.97 1.73 0.00 3.62
2995 3160 5.364778 GGAAAAGTATGTTTTTGGTGCCTT 58.635 37.500 0.00 0.00 0.00 4.35
2997 3162 4.062293 GGGAAAAGTATGTTTTTGGTGCC 58.938 43.478 0.00 0.00 0.00 5.01
2999 3164 7.800155 AATTGGGAAAAGTATGTTTTTGGTG 57.200 32.000 0.00 0.00 0.00 4.17
3073 3542 7.802547 AGAAAAGGTATTATATAAGGGGTCCCA 59.197 37.037 10.98 0.00 38.92 4.37
3093 3562 3.424703 TGGCCTGGATTTCTGAGAAAAG 58.575 45.455 12.10 5.01 0.00 2.27
3098 3567 4.637387 ATCTATGGCCTGGATTTCTGAG 57.363 45.455 3.32 0.00 0.00 3.35
3134 3603 4.097551 TGATCATCTTTTGGACACCACA 57.902 40.909 0.00 0.00 30.78 4.17
3137 3606 4.337555 CCTCATGATCATCTTTTGGACACC 59.662 45.833 4.86 0.00 0.00 4.16
3139 3608 5.440207 TCCTCATGATCATCTTTTGGACA 57.560 39.130 4.86 0.00 0.00 4.02
3152 3621 8.587608 TCAAAAGCAAAGTATTTTCCTCATGAT 58.412 29.630 0.00 0.00 35.03 2.45
3153 3622 7.867403 GTCAAAAGCAAAGTATTTTCCTCATGA 59.133 33.333 0.00 0.00 35.03 3.07
3154 3623 7.652909 TGTCAAAAGCAAAGTATTTTCCTCATG 59.347 33.333 0.00 0.00 35.03 3.07
3155 3624 7.725251 TGTCAAAAGCAAAGTATTTTCCTCAT 58.275 30.769 0.00 0.00 35.03 2.90
3156 3625 7.106439 TGTCAAAAGCAAAGTATTTTCCTCA 57.894 32.000 0.00 0.00 35.03 3.86
3157 3626 8.328146 GTTTGTCAAAAGCAAAGTATTTTCCTC 58.672 33.333 0.00 0.00 35.03 3.71
3159 3628 7.406553 GGTTTGTCAAAAGCAAAGTATTTTCC 58.593 34.615 0.00 0.00 42.21 3.13
3161 3630 6.814146 TCGGTTTGTCAAAAGCAAAGTATTTT 59.186 30.769 0.00 0.00 42.66 1.82
3162 3631 6.254804 GTCGGTTTGTCAAAAGCAAAGTATTT 59.745 34.615 0.00 0.00 42.66 1.40
3164 3633 5.163602 TGTCGGTTTGTCAAAAGCAAAGTAT 60.164 36.000 0.00 0.00 42.66 2.12
3166 3635 3.057174 TGTCGGTTTGTCAAAAGCAAAGT 60.057 39.130 0.00 0.00 42.66 2.66
3167 3636 3.303229 GTGTCGGTTTGTCAAAAGCAAAG 59.697 43.478 0.00 0.00 42.66 2.77
3168 3637 3.246619 GTGTCGGTTTGTCAAAAGCAAA 58.753 40.909 0.00 0.00 42.66 3.68
3169 3638 2.229062 TGTGTCGGTTTGTCAAAAGCAA 59.771 40.909 0.00 0.00 42.66 3.91
3170 3639 1.813178 TGTGTCGGTTTGTCAAAAGCA 59.187 42.857 0.00 0.00 42.66 3.91
3171 3640 2.553079 TGTGTCGGTTTGTCAAAAGC 57.447 45.000 0.00 0.00 39.81 3.51
3172 3641 4.208355 CGTATGTGTCGGTTTGTCAAAAG 58.792 43.478 0.00 0.00 0.00 2.27
3173 3642 3.622163 ACGTATGTGTCGGTTTGTCAAAA 59.378 39.130 0.00 0.00 0.00 2.44
3174 3643 3.196463 ACGTATGTGTCGGTTTGTCAAA 58.804 40.909 0.00 0.00 0.00 2.69
3175 3644 2.823984 ACGTATGTGTCGGTTTGTCAA 58.176 42.857 0.00 0.00 0.00 3.18
3176 3645 2.512485 ACGTATGTGTCGGTTTGTCA 57.488 45.000 0.00 0.00 0.00 3.58
3177 3646 6.029607 TCTATTACGTATGTGTCGGTTTGTC 58.970 40.000 0.00 0.00 0.00 3.18
3178 3647 5.953183 TCTATTACGTATGTGTCGGTTTGT 58.047 37.500 0.00 0.00 0.00 2.83
3179 3648 6.874297 TTCTATTACGTATGTGTCGGTTTG 57.126 37.500 0.00 0.00 0.00 2.93
3180 3649 7.887996 TTTTCTATTACGTATGTGTCGGTTT 57.112 32.000 0.00 0.00 0.00 3.27
3181 3650 8.385111 CAATTTTCTATTACGTATGTGTCGGTT 58.615 33.333 0.00 0.00 0.00 4.44
3182 3651 7.760794 TCAATTTTCTATTACGTATGTGTCGGT 59.239 33.333 0.00 0.00 0.00 4.69
3183 3652 8.122306 TCAATTTTCTATTACGTATGTGTCGG 57.878 34.615 0.00 0.00 0.00 4.79
3192 3661 9.209175 GAGGCTCATATCAATTTTCTATTACGT 57.791 33.333 10.25 0.00 0.00 3.57
3193 3662 8.660373 GGAGGCTCATATCAATTTTCTATTACG 58.340 37.037 17.69 0.00 0.00 3.18
3194 3663 9.507329 TGGAGGCTCATATCAATTTTCTATTAC 57.493 33.333 17.69 0.00 0.00 1.89
3196 3665 9.075678 CTTGGAGGCTCATATCAATTTTCTATT 57.924 33.333 17.69 0.00 0.00 1.73
3197 3666 7.176340 GCTTGGAGGCTCATATCAATTTTCTAT 59.824 37.037 17.69 0.00 0.00 1.98
3198 3667 6.488006 GCTTGGAGGCTCATATCAATTTTCTA 59.512 38.462 17.69 0.00 0.00 2.10
3199 3668 5.301298 GCTTGGAGGCTCATATCAATTTTCT 59.699 40.000 17.69 0.00 0.00 2.52
3231 3700 7.865385 TGAACTGTTTAATCGAGAAATTTTGGG 59.135 33.333 0.00 0.00 0.00 4.12
3245 3714 9.750125 GGTTTTTGAGATCTTGAACTGTTTAAT 57.250 29.630 0.00 0.00 0.00 1.40
3255 3724 6.072508 CGAGGAATTGGTTTTTGAGATCTTGA 60.073 38.462 0.00 0.00 0.00 3.02
3265 3734 2.626266 GGTCACCGAGGAATTGGTTTTT 59.374 45.455 0.00 0.00 35.96 1.94
3281 3750 5.453567 AGATTGCTAAACCAAAAGGTCAC 57.546 39.130 0.00 0.00 0.00 3.67
3316 3785 5.904362 AAGACCTGATAAAGTTCATTGGC 57.096 39.130 0.00 0.00 0.00 4.52
3328 3797 6.180472 GTTGGGAGATGAAAAAGACCTGATA 58.820 40.000 0.00 0.00 0.00 2.15
3331 3800 3.507622 GGTTGGGAGATGAAAAAGACCTG 59.492 47.826 0.00 0.00 0.00 4.00
3340 3809 9.713684 AATAATATTTCTTGGTTGGGAGATGAA 57.286 29.630 0.00 0.00 0.00 2.57
3377 3846 0.605319 TCACACGGGGTTTCATGCTC 60.605 55.000 0.00 0.00 0.00 4.26
3382 3851 2.885894 GGTAATTTCACACGGGGTTTCA 59.114 45.455 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.