Multiple sequence alignment - TraesCS6A01G067900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G067900 chr6A 100.000 2240 0 0 1 2240 36398208 36400447 0.000000e+00 4137
1 TraesCS6A01G067900 chr6A 83.404 235 30 6 1677 1905 30139317 30139548 2.250000e-50 209
2 TraesCS6A01G067900 chr6B 87.078 1509 123 31 217 1683 67503883 67505361 0.000000e+00 1640
3 TraesCS6A01G067900 chr6B 86.662 1507 133 29 217 1683 68640337 68638859 0.000000e+00 1607
4 TraesCS6A01G067900 chr6B 92.273 220 14 2 1 218 68640600 68640382 2.160000e-80 309
5 TraesCS6A01G067900 chr6B 91.892 222 14 2 1 218 67503617 67503838 7.770000e-80 307
6 TraesCS6A01G067900 chr6D 84.176 910 72 28 1 889 31826796 31827654 0.000000e+00 817
7 TraesCS6A01G067900 chr6D 90.562 498 39 4 891 1380 31827684 31828181 0.000000e+00 652
8 TraesCS6A01G067900 chr6D 81.967 122 18 4 2001 2120 413375236 413375117 1.420000e-17 100
9 TraesCS6A01G067900 chr2A 90.644 481 39 4 1684 2159 14716182 14715703 3.140000e-178 634
10 TraesCS6A01G067900 chr2A 84.211 228 29 4 1684 1905 711660558 711660784 4.850000e-52 215
11 TraesCS6A01G067900 chr3B 85.909 220 24 4 1690 1905 79279866 79279650 6.220000e-56 228
12 TraesCS6A01G067900 chr5A 84.322 236 29 5 1676 1905 78469484 78469717 8.050000e-55 224
13 TraesCS6A01G067900 chr2D 84.956 226 29 2 1684 1905 73226210 73226434 8.050000e-55 224
14 TraesCS6A01G067900 chr7A 85.202 223 24 4 1690 1905 689317565 689317785 1.040000e-53 220
15 TraesCS6A01G067900 chr5D 84.649 228 27 4 1684 1905 432158285 432158510 1.040000e-53 220
16 TraesCS6A01G067900 chr4D 84.211 228 30 4 1683 1905 472214484 472214710 1.350000e-52 217


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G067900 chr6A 36398208 36400447 2239 False 4137.0 4137 100.0000 1 2240 1 chr6A.!!$F2 2239
1 TraesCS6A01G067900 chr6B 67503617 67505361 1744 False 973.5 1640 89.4850 1 1683 2 chr6B.!!$F1 1682
2 TraesCS6A01G067900 chr6B 68638859 68640600 1741 True 958.0 1607 89.4675 1 1683 2 chr6B.!!$R1 1682
3 TraesCS6A01G067900 chr6D 31826796 31828181 1385 False 734.5 817 87.3690 1 1380 2 chr6D.!!$F1 1379

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
958 1077 0.178953 ATCACAAAGCTGTTGGCCCT 60.179 50.0 0.0 0.0 43.05 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1872 1998 0.026544 GAGAGTAGCGGACGAACGAG 59.973 60.0 7.62 0.0 35.47 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 9.035607 GTATAGTCACAAATAAGACATCACTGG 57.964 37.037 0.00 0.00 37.23 4.00
100 107 1.351017 CAAACTCTTGTCCCAGCCCTA 59.649 52.381 0.00 0.00 0.00 3.53
108 115 1.007842 TGTCCCAGCCCTATCACACTA 59.992 52.381 0.00 0.00 0.00 2.74
182 190 3.997021 AGAAACTCGAGTGCCATAACAAG 59.003 43.478 20.85 0.00 0.00 3.16
228 282 3.007182 AGCAAATCCCTTGACCACATTTG 59.993 43.478 0.00 0.00 37.17 2.32
233 287 7.385267 CAAATCCCTTGACCACATTTGAATTA 58.615 34.615 0.00 0.00 37.17 1.40
302 358 7.009907 CACAATACAGACATAGACACTCACATG 59.990 40.741 0.00 0.00 0.00 3.21
358 416 0.603707 CACATCACTGGCACTTCGGT 60.604 55.000 0.00 0.00 0.00 4.69
373 431 2.779755 TCGGTGCATAGGTGTCAAAT 57.220 45.000 0.00 0.00 0.00 2.32
388 446 5.418840 GGTGTCAAATATGTGGTTTGATCCT 59.581 40.000 4.81 0.00 44.56 3.24
428 490 2.288666 CATCCTAACCATCCAACCACG 58.711 52.381 0.00 0.00 0.00 4.94
475 537 1.529226 TGCGTGGGATTACAAACTGG 58.471 50.000 0.00 0.00 0.00 4.00
481 544 4.979815 CGTGGGATTACAAACTGGAAAAAC 59.020 41.667 0.00 0.00 0.00 2.43
485 548 6.098982 TGGGATTACAAACTGGAAAAACATGT 59.901 34.615 0.00 0.00 0.00 3.21
537 601 7.932335 GCTCGCTAGCCTAATAAATCTAGATA 58.068 38.462 9.66 0.00 43.40 1.98
552 616 7.419711 AATCTAGATAGAGGGAAAACAACGA 57.580 36.000 5.46 0.00 35.50 3.85
568 632 4.341487 ACAACGATCCGATCCTATATCCA 58.659 43.478 2.69 0.00 0.00 3.41
569 633 4.956700 ACAACGATCCGATCCTATATCCAT 59.043 41.667 2.69 0.00 0.00 3.41
570 634 5.067936 ACAACGATCCGATCCTATATCCATC 59.932 44.000 2.69 0.00 0.00 3.51
571 635 5.055265 ACGATCCGATCCTATATCCATCT 57.945 43.478 2.69 0.00 0.00 2.90
572 636 5.450453 ACGATCCGATCCTATATCCATCTT 58.550 41.667 2.69 0.00 0.00 2.40
573 637 6.602278 ACGATCCGATCCTATATCCATCTTA 58.398 40.000 2.69 0.00 0.00 2.10
574 638 7.061054 ACGATCCGATCCTATATCCATCTTAA 58.939 38.462 2.69 0.00 0.00 1.85
575 639 7.560262 ACGATCCGATCCTATATCCATCTTAAA 59.440 37.037 2.69 0.00 0.00 1.52
576 640 8.079203 CGATCCGATCCTATATCCATCTTAAAG 58.921 40.741 2.69 0.00 0.00 1.85
577 641 9.137459 GATCCGATCCTATATCCATCTTAAAGA 57.863 37.037 0.00 0.00 0.00 2.52
578 642 8.895141 TCCGATCCTATATCCATCTTAAAGAA 57.105 34.615 0.00 0.00 0.00 2.52
579 643 9.494055 TCCGATCCTATATCCATCTTAAAGAAT 57.506 33.333 0.00 0.00 0.00 2.40
605 669 7.870509 TCTTTATCCATGAGGTTTCATCTTG 57.129 36.000 0.00 0.00 42.12 3.02
606 670 7.632861 TCTTTATCCATGAGGTTTCATCTTGA 58.367 34.615 0.00 0.00 42.12 3.02
607 671 8.277197 TCTTTATCCATGAGGTTTCATCTTGAT 58.723 33.333 0.00 0.00 42.12 2.57
608 672 7.812690 TTATCCATGAGGTTTCATCTTGATG 57.187 36.000 4.35 4.35 42.12 3.07
609 673 5.440207 TCCATGAGGTTTCATCTTGATGA 57.560 39.130 9.02 9.02 42.12 2.92
736 811 5.131977 TCCTAATTAGCATCAGCCACCTTTA 59.868 40.000 6.99 0.00 43.56 1.85
795 872 7.520614 GCCTGTCTTAAAAATCATCCTTATCCG 60.521 40.741 0.00 0.00 0.00 4.18
796 873 7.041098 CCTGTCTTAAAAATCATCCTTATCCGG 60.041 40.741 0.00 0.00 0.00 5.14
797 874 7.570132 TGTCTTAAAAATCATCCTTATCCGGA 58.430 34.615 6.61 6.61 37.50 5.14
799 876 9.067986 GTCTTAAAAATCATCCTTATCCGGAAT 57.932 33.333 9.01 0.00 36.49 3.01
800 877 9.284968 TCTTAAAAATCATCCTTATCCGGAATC 57.715 33.333 9.01 0.00 36.49 2.52
802 879 9.586732 TTAAAAATCATCCTTATCCGGAATCAT 57.413 29.630 9.01 0.00 36.49 2.45
804 881 8.482852 AAAATCATCCTTATCCGGAATCATTT 57.517 30.769 9.01 0.00 36.49 2.32
805 882 7.458409 AATCATCCTTATCCGGAATCATTTG 57.542 36.000 9.01 3.16 36.49 2.32
806 883 5.316167 TCATCCTTATCCGGAATCATTTGG 58.684 41.667 9.01 4.44 36.49 3.28
807 884 5.073008 TCATCCTTATCCGGAATCATTTGGA 59.927 40.000 9.01 10.03 36.49 3.53
840 923 9.567776 TGATTTGACCACGATTTTATATGGTAT 57.432 29.630 0.00 0.00 45.55 2.73
873 956 5.829924 TGCTCTAATTGAATTCCTTCCATCC 59.170 40.000 2.27 0.00 0.00 3.51
875 958 6.492772 GCTCTAATTGAATTCCTTCCATCCAT 59.507 38.462 2.27 0.00 0.00 3.41
885 985 3.458118 TCCTTCCATCCATGTTATTCGGT 59.542 43.478 0.00 0.00 0.00 4.69
906 1017 5.047802 CGGTAAACGGCTATAAATAGGAGGA 60.048 44.000 0.00 0.00 39.42 3.71
908 1019 6.648310 GGTAAACGGCTATAAATAGGAGGAAC 59.352 42.308 0.00 0.00 0.00 3.62
923 1039 3.456277 GGAGGAACCAAGACATCCATACT 59.544 47.826 0.00 0.00 37.02 2.12
948 1067 0.368227 CGTCTCTCGCATCACAAAGC 59.632 55.000 0.00 0.00 0.00 3.51
958 1077 0.178953 ATCACAAAGCTGTTGGCCCT 60.179 50.000 0.00 0.00 43.05 5.19
969 1088 0.537371 GTTGGCCCTGTAGCACAAGT 60.537 55.000 0.00 0.00 0.00 3.16
975 1094 2.289444 GCCCTGTAGCACAAGTGAGTTA 60.289 50.000 4.04 0.00 0.00 2.24
1089 1210 2.425592 CAGGTGTTGCCGACTCCA 59.574 61.111 5.99 0.00 43.00 3.86
1107 1228 1.274167 CCATGCTGCAACCTCAAATGT 59.726 47.619 6.36 0.00 0.00 2.71
1115 1236 2.158971 GCAACCTCAAATGTTGTGGGTT 60.159 45.455 12.35 12.15 41.16 4.11
1116 1237 3.681313 GCAACCTCAAATGTTGTGGGTTT 60.681 43.478 12.35 0.00 41.16 3.27
1168 1289 1.603236 GCCCATTTCGCCATTGTCCA 61.603 55.000 0.00 0.00 0.00 4.02
1170 1291 1.176527 CCATTTCGCCATTGTCCACT 58.823 50.000 0.00 0.00 0.00 4.00
1173 1294 0.537143 TTTCGCCATTGTCCACTGCT 60.537 50.000 0.00 0.00 0.00 4.24
1324 1449 1.512926 CACCTAGCAAGTTTCGCTGT 58.487 50.000 0.00 0.00 40.73 4.40
1325 1450 1.195448 CACCTAGCAAGTTTCGCTGTG 59.805 52.381 0.00 0.00 40.73 3.66
1326 1451 1.202651 ACCTAGCAAGTTTCGCTGTGT 60.203 47.619 0.00 0.00 40.73 3.72
1327 1452 1.195448 CCTAGCAAGTTTCGCTGTGTG 59.805 52.381 0.00 0.00 40.73 3.82
1329 1454 1.094785 AGCAAGTTTCGCTGTGTGTT 58.905 45.000 0.00 0.00 38.60 3.32
1331 1456 1.859998 GCAAGTTTCGCTGTGTGTTCC 60.860 52.381 0.00 0.00 0.00 3.62
1332 1457 0.655733 AAGTTTCGCTGTGTGTTCCG 59.344 50.000 0.00 0.00 0.00 4.30
1333 1458 1.368850 GTTTCGCTGTGTGTTCCGC 60.369 57.895 0.00 0.00 0.00 5.54
1373 1498 6.923199 ATTCCTGATTTGTTCTGTTCCATT 57.077 33.333 0.00 0.00 0.00 3.16
1380 1505 7.326454 TGATTTGTTCTGTTCCATTGAAACAA 58.674 30.769 0.00 0.00 30.79 2.83
1385 1510 7.776107 TGTTCTGTTCCATTGAAACAACAATA 58.224 30.769 0.00 0.00 38.25 1.90
1424 1549 4.037858 GCAGTAGCATTCCAAATTCTGG 57.962 45.455 0.00 1.49 43.35 3.86
1458 1583 5.574055 GTGTCTGCAATGATAAACCATGTTG 59.426 40.000 0.00 0.00 0.00 3.33
1461 1586 3.197265 GCAATGATAAACCATGTTGGGC 58.803 45.455 0.00 0.00 43.37 5.36
1513 1638 5.940470 AGAACAGAACACATAATCCTCCAAC 59.060 40.000 0.00 0.00 0.00 3.77
1528 1653 3.334691 CTCCAACTAAATCTGCCGAACA 58.665 45.455 0.00 0.00 0.00 3.18
1561 1686 2.744760 AGCTGCTCTAGTCTGGATCAA 58.255 47.619 0.00 0.00 0.00 2.57
1584 1709 0.177604 CTCATCTCGGCTGCCTTCTT 59.822 55.000 17.92 0.00 0.00 2.52
1629 1755 8.793592 GTTTCCTAAAAGGAGTCATACATGTTT 58.206 33.333 2.30 0.00 46.73 2.83
1642 1768 6.828785 GTCATACATGTTTCCTTTAGGTGGAT 59.171 38.462 2.30 0.00 36.34 3.41
1666 1792 1.846007 TTCATGGCCGGTTTAGCAAT 58.154 45.000 1.90 0.00 0.00 3.56
1684 1810 5.964887 GCAATTGCGCCTATTAAAAATGA 57.035 34.783 15.87 0.00 0.00 2.57
1685 1811 5.966335 GCAATTGCGCCTATTAAAAATGAG 58.034 37.500 15.87 0.00 0.00 2.90
1686 1812 5.748152 GCAATTGCGCCTATTAAAAATGAGA 59.252 36.000 15.87 0.00 0.00 3.27
1687 1813 6.421801 GCAATTGCGCCTATTAAAAATGAGAT 59.578 34.615 15.87 0.00 0.00 2.75
1688 1814 7.594758 GCAATTGCGCCTATTAAAAATGAGATA 59.405 33.333 15.87 0.00 0.00 1.98
1689 1815 9.630098 CAATTGCGCCTATTAAAAATGAGATAT 57.370 29.630 4.18 0.00 0.00 1.63
1719 1845 8.857098 ACGGTACATCATACTATTCAATAGTGT 58.143 33.333 18.85 10.41 45.24 3.55
1736 1862 9.429109 TCAATAGTGTGGGTAGTATTTAGATGA 57.571 33.333 0.00 0.00 0.00 2.92
1739 1865 9.830186 ATAGTGTGGGTAGTATTTAGATGATCT 57.170 33.333 0.00 0.00 0.00 2.75
1741 1867 9.656323 AGTGTGGGTAGTATTTAGATGATCTAA 57.344 33.333 10.70 10.70 37.20 2.10
1742 1868 9.694137 GTGTGGGTAGTATTTAGATGATCTAAC 57.306 37.037 14.09 4.71 38.56 2.34
1743 1869 8.573885 TGTGGGTAGTATTTAGATGATCTAACG 58.426 37.037 14.09 0.00 38.56 3.18
1744 1870 8.027771 GTGGGTAGTATTTAGATGATCTAACGG 58.972 40.741 14.09 0.00 38.56 4.44
1745 1871 7.727186 TGGGTAGTATTTAGATGATCTAACGGT 59.273 37.037 14.09 6.75 38.56 4.83
1746 1872 8.583296 GGGTAGTATTTAGATGATCTAACGGTT 58.417 37.037 14.09 0.00 38.56 4.44
1753 1879 8.657074 TTTAGATGATCTAACGGTTAACATGG 57.343 34.615 14.09 0.00 38.56 3.66
1754 1880 6.479972 AGATGATCTAACGGTTAACATGGA 57.520 37.500 8.10 1.16 0.00 3.41
1755 1881 7.067496 AGATGATCTAACGGTTAACATGGAT 57.933 36.000 8.10 5.97 0.00 3.41
1756 1882 7.155328 AGATGATCTAACGGTTAACATGGATC 58.845 38.462 17.26 17.26 0.00 3.36
1757 1883 5.286438 TGATCTAACGGTTAACATGGATCG 58.714 41.667 18.11 10.73 33.33 3.69
1758 1884 4.049546 TCTAACGGTTAACATGGATCGG 57.950 45.455 8.10 0.00 0.00 4.18
1759 1885 2.773993 AACGGTTAACATGGATCGGT 57.226 45.000 8.10 0.00 0.00 4.69
1760 1886 3.891422 AACGGTTAACATGGATCGGTA 57.109 42.857 8.10 0.00 0.00 4.02
1761 1887 3.891422 ACGGTTAACATGGATCGGTAA 57.109 42.857 8.10 0.00 0.00 2.85
1762 1888 4.205065 ACGGTTAACATGGATCGGTAAA 57.795 40.909 8.10 0.00 0.00 2.01
1763 1889 4.577875 ACGGTTAACATGGATCGGTAAAA 58.422 39.130 8.10 0.00 0.00 1.52
1764 1890 5.187687 ACGGTTAACATGGATCGGTAAAAT 58.812 37.500 8.10 0.00 0.00 1.82
1765 1891 5.648960 ACGGTTAACATGGATCGGTAAAATT 59.351 36.000 8.10 0.00 0.00 1.82
1766 1892 6.151480 ACGGTTAACATGGATCGGTAAAATTT 59.849 34.615 8.10 0.00 0.00 1.82
1767 1893 7.336427 ACGGTTAACATGGATCGGTAAAATTTA 59.664 33.333 8.10 0.00 0.00 1.40
1768 1894 8.182881 CGGTTAACATGGATCGGTAAAATTTAA 58.817 33.333 8.10 0.00 0.00 1.52
1769 1895 9.857957 GGTTAACATGGATCGGTAAAATTTAAA 57.142 29.630 8.10 0.00 0.00 1.52
1773 1899 8.575649 ACATGGATCGGTAAAATTTAAACTCT 57.424 30.769 0.00 0.00 0.00 3.24
1774 1900 9.675464 ACATGGATCGGTAAAATTTAAACTCTA 57.325 29.630 0.00 0.00 0.00 2.43
1776 1902 8.726870 TGGATCGGTAAAATTTAAACTCTAGG 57.273 34.615 0.00 0.00 0.00 3.02
1777 1903 8.542080 TGGATCGGTAAAATTTAAACTCTAGGA 58.458 33.333 0.00 0.00 0.00 2.94
1778 1904 9.557061 GGATCGGTAAAATTTAAACTCTAGGAT 57.443 33.333 0.00 0.00 0.00 3.24
1839 1965 9.910267 TTCTCAATTTAATCCTGATTGATCTCA 57.090 29.630 2.66 0.00 38.63 3.27
1840 1966 9.334947 TCTCAATTTAATCCTGATTGATCTCAC 57.665 33.333 2.66 0.00 38.63 3.51
1841 1967 9.117183 CTCAATTTAATCCTGATTGATCTCACA 57.883 33.333 2.66 0.00 38.63 3.58
1842 1968 9.465199 TCAATTTAATCCTGATTGATCTCACAA 57.535 29.630 2.66 0.00 35.51 3.33
1843 1969 9.731819 CAATTTAATCCTGATTGATCTCACAAG 57.268 33.333 2.66 0.00 33.67 3.16
1844 1970 9.471702 AATTTAATCCTGATTGATCTCACAAGT 57.528 29.630 2.66 0.00 33.22 3.16
1845 1971 8.868522 TTTAATCCTGATTGATCTCACAAGTT 57.131 30.769 2.66 0.00 33.22 2.66
1846 1972 9.958180 TTTAATCCTGATTGATCTCACAAGTTA 57.042 29.630 2.66 0.00 33.22 2.24
1847 1973 9.958180 TTAATCCTGATTGATCTCACAAGTTAA 57.042 29.630 2.66 0.00 33.22 2.01
1848 1974 7.856145 ATCCTGATTGATCTCACAAGTTAAC 57.144 36.000 0.00 0.00 33.22 2.01
1849 1975 7.009179 TCCTGATTGATCTCACAAGTTAACT 57.991 36.000 1.12 1.12 33.22 2.24
1850 1976 8.134202 TCCTGATTGATCTCACAAGTTAACTA 57.866 34.615 8.92 0.00 33.22 2.24
1851 1977 8.593679 TCCTGATTGATCTCACAAGTTAACTAA 58.406 33.333 8.92 0.00 33.22 2.24
1852 1978 9.388506 CCTGATTGATCTCACAAGTTAACTAAT 57.611 33.333 8.92 1.38 33.22 1.73
1858 1984 9.809096 TGATCTCACAAGTTAACTAATCTCATC 57.191 33.333 8.92 7.81 0.00 2.92
1859 1985 9.255304 GATCTCACAAGTTAACTAATCTCATCC 57.745 37.037 8.92 0.00 0.00 3.51
1860 1986 7.556844 TCTCACAAGTTAACTAATCTCATCCC 58.443 38.462 8.92 0.00 0.00 3.85
1861 1987 7.180229 TCTCACAAGTTAACTAATCTCATCCCA 59.820 37.037 8.92 0.00 0.00 4.37
1862 1988 7.861629 TCACAAGTTAACTAATCTCATCCCAT 58.138 34.615 8.92 0.00 0.00 4.00
1863 1989 7.987458 TCACAAGTTAACTAATCTCATCCCATC 59.013 37.037 8.92 0.00 0.00 3.51
1864 1990 7.227512 CACAAGTTAACTAATCTCATCCCATCC 59.772 40.741 8.92 0.00 0.00 3.51
1865 1991 7.092444 ACAAGTTAACTAATCTCATCCCATCCA 60.092 37.037 8.92 0.00 0.00 3.41
1866 1992 6.831976 AGTTAACTAATCTCATCCCATCCAC 58.168 40.000 6.26 0.00 0.00 4.02
1867 1993 6.386927 AGTTAACTAATCTCATCCCATCCACA 59.613 38.462 6.26 0.00 0.00 4.17
1868 1994 4.696479 ACTAATCTCATCCCATCCACAC 57.304 45.455 0.00 0.00 0.00 3.82
1869 1995 3.392616 ACTAATCTCATCCCATCCACACC 59.607 47.826 0.00 0.00 0.00 4.16
1870 1996 0.761187 ATCTCATCCCATCCACACCG 59.239 55.000 0.00 0.00 0.00 4.94
1871 1997 0.617535 TCTCATCCCATCCACACCGT 60.618 55.000 0.00 0.00 0.00 4.83
1872 1998 0.179073 CTCATCCCATCCACACCGTC 60.179 60.000 0.00 0.00 0.00 4.79
1873 1999 0.617535 TCATCCCATCCACACCGTCT 60.618 55.000 0.00 0.00 0.00 4.18
1874 2000 0.179073 CATCCCATCCACACCGTCTC 60.179 60.000 0.00 0.00 0.00 3.36
1875 2001 1.676678 ATCCCATCCACACCGTCTCG 61.677 60.000 0.00 0.00 0.00 4.04
1876 2002 2.646175 CCCATCCACACCGTCTCGT 61.646 63.158 0.00 0.00 0.00 4.18
1877 2003 1.292223 CCATCCACACCGTCTCGTT 59.708 57.895 0.00 0.00 0.00 3.85
1878 2004 0.736325 CCATCCACACCGTCTCGTTC 60.736 60.000 0.00 0.00 0.00 3.95
1879 2005 1.071019 CATCCACACCGTCTCGTTCG 61.071 60.000 0.00 0.00 0.00 3.95
1880 2006 1.521450 ATCCACACCGTCTCGTTCGT 61.521 55.000 0.00 0.00 0.00 3.85
1881 2007 1.728426 CCACACCGTCTCGTTCGTC 60.728 63.158 0.00 0.00 0.00 4.20
1882 2008 1.728426 CACACCGTCTCGTTCGTCC 60.728 63.158 0.00 0.00 0.00 4.79
1883 2009 2.501222 CACCGTCTCGTTCGTCCG 60.501 66.667 0.00 0.00 0.00 4.79
1884 2010 4.395583 ACCGTCTCGTTCGTCCGC 62.396 66.667 0.00 0.00 0.00 5.54
1885 2011 4.099170 CCGTCTCGTTCGTCCGCT 62.099 66.667 0.00 0.00 0.00 5.52
1886 2012 2.743752 CCGTCTCGTTCGTCCGCTA 61.744 63.158 0.00 0.00 0.00 4.26
1887 2013 1.579626 CGTCTCGTTCGTCCGCTAC 60.580 63.158 0.00 0.00 0.00 3.58
1888 2014 1.792941 GTCTCGTTCGTCCGCTACT 59.207 57.895 0.00 0.00 0.00 2.57
1889 2015 0.247616 GTCTCGTTCGTCCGCTACTC 60.248 60.000 0.00 0.00 0.00 2.59
1890 2016 0.390866 TCTCGTTCGTCCGCTACTCT 60.391 55.000 0.00 0.00 0.00 3.24
1891 2017 0.026544 CTCGTTCGTCCGCTACTCTC 59.973 60.000 0.00 0.00 0.00 3.20
1892 2018 1.296722 CGTTCGTCCGCTACTCTCG 60.297 63.158 0.00 0.00 0.00 4.04
1893 2019 1.690283 CGTTCGTCCGCTACTCTCGA 61.690 60.000 0.00 0.00 0.00 4.04
1894 2020 0.656785 GTTCGTCCGCTACTCTCGAT 59.343 55.000 0.00 0.00 0.00 3.59
1895 2021 0.656259 TTCGTCCGCTACTCTCGATG 59.344 55.000 0.00 0.00 0.00 3.84
1896 2022 1.369448 CGTCCGCTACTCTCGATGC 60.369 63.158 0.00 0.00 0.00 3.91
1897 2023 1.008309 GTCCGCTACTCTCGATGCC 60.008 63.158 0.00 0.00 0.00 4.40
1898 2024 1.453197 TCCGCTACTCTCGATGCCA 60.453 57.895 0.00 0.00 0.00 4.92
1899 2025 1.299468 CCGCTACTCTCGATGCCAC 60.299 63.158 0.00 0.00 0.00 5.01
1900 2026 1.655654 CGCTACTCTCGATGCCACG 60.656 63.158 0.00 0.00 0.00 4.94
1901 2027 1.946650 GCTACTCTCGATGCCACGC 60.947 63.158 0.00 0.00 0.00 5.34
1902 2028 1.299468 CTACTCTCGATGCCACGCC 60.299 63.158 0.00 0.00 0.00 5.68
1903 2029 2.990674 CTACTCTCGATGCCACGCCG 62.991 65.000 0.00 0.00 0.00 6.46
1906 2032 4.569023 CTCGATGCCACGCCGCTA 62.569 66.667 0.00 0.00 0.00 4.26
1907 2033 4.865761 TCGATGCCACGCCGCTAC 62.866 66.667 0.00 0.00 0.00 3.58
1908 2034 4.873129 CGATGCCACGCCGCTACT 62.873 66.667 0.00 0.00 0.00 2.57
1909 2035 3.264897 GATGCCACGCCGCTACTG 61.265 66.667 0.00 0.00 0.00 2.74
1916 2042 4.148825 CGCCGCTACTGCTCCCTT 62.149 66.667 0.00 0.00 36.97 3.95
1917 2043 2.512515 GCCGCTACTGCTCCCTTG 60.513 66.667 0.00 0.00 36.97 3.61
1918 2044 2.187946 CCGCTACTGCTCCCTTGG 59.812 66.667 0.00 0.00 36.97 3.61
1919 2045 2.187946 CGCTACTGCTCCCTTGGG 59.812 66.667 0.00 0.00 36.97 4.12
1920 2046 2.124529 GCTACTGCTCCCTTGGGC 60.125 66.667 0.00 0.00 36.03 5.36
1921 2047 2.674220 GCTACTGCTCCCTTGGGCT 61.674 63.158 0.00 0.00 36.03 5.19
1922 2048 1.222936 CTACTGCTCCCTTGGGCTG 59.777 63.158 0.00 0.00 0.00 4.85
1923 2049 2.883267 CTACTGCTCCCTTGGGCTGC 62.883 65.000 13.67 13.67 0.00 5.25
1941 2067 4.697756 CGGAGTGGCTTTGCGGGA 62.698 66.667 0.00 0.00 0.00 5.14
1942 2068 2.747855 GGAGTGGCTTTGCGGGAG 60.748 66.667 0.00 0.00 0.00 4.30
1943 2069 2.347490 GAGTGGCTTTGCGGGAGA 59.653 61.111 0.00 0.00 0.00 3.71
1944 2070 1.302511 GAGTGGCTTTGCGGGAGAA 60.303 57.895 0.00 0.00 0.00 2.87
1945 2071 0.678048 GAGTGGCTTTGCGGGAGAAT 60.678 55.000 0.00 0.00 0.00 2.40
1946 2072 0.678048 AGTGGCTTTGCGGGAGAATC 60.678 55.000 0.00 0.00 0.00 2.52
1947 2073 0.960364 GTGGCTTTGCGGGAGAATCA 60.960 55.000 0.00 0.00 36.25 2.57
1948 2074 0.960364 TGGCTTTGCGGGAGAATCAC 60.960 55.000 0.00 0.00 36.25 3.06
1949 2075 1.657751 GGCTTTGCGGGAGAATCACC 61.658 60.000 0.00 0.00 32.04 4.02
1950 2076 0.960364 GCTTTGCGGGAGAATCACCA 60.960 55.000 0.00 0.00 32.04 4.17
1951 2077 1.755179 CTTTGCGGGAGAATCACCAT 58.245 50.000 0.00 0.00 32.04 3.55
1952 2078 1.402968 CTTTGCGGGAGAATCACCATG 59.597 52.381 0.00 0.00 32.04 3.66
1953 2079 0.394216 TTGCGGGAGAATCACCATGG 60.394 55.000 11.19 11.19 32.04 3.66
1954 2080 2.189499 GCGGGAGAATCACCATGGC 61.189 63.158 13.04 0.00 32.04 4.40
1955 2081 1.889105 CGGGAGAATCACCATGGCG 60.889 63.158 13.04 1.26 32.04 5.69
1956 2082 1.526887 GGGAGAATCACCATGGCGA 59.473 57.895 13.04 8.67 36.25 5.54
1957 2083 0.815615 GGGAGAATCACCATGGCGAC 60.816 60.000 13.04 0.00 36.25 5.19
1958 2084 1.154205 GGAGAATCACCATGGCGACG 61.154 60.000 13.04 0.00 36.25 5.12
1959 2085 0.179111 GAGAATCACCATGGCGACGA 60.179 55.000 13.04 3.76 33.17 4.20
1960 2086 0.179100 AGAATCACCATGGCGACGAG 60.179 55.000 13.04 0.00 0.00 4.18
1961 2087 1.153369 AATCACCATGGCGACGAGG 60.153 57.895 13.04 0.00 0.00 4.63
1962 2088 1.899437 AATCACCATGGCGACGAGGT 61.899 55.000 13.04 0.00 40.31 3.85
1963 2089 2.298158 ATCACCATGGCGACGAGGTC 62.298 60.000 13.04 0.00 37.94 3.85
1964 2090 2.994995 ACCATGGCGACGAGGTCA 60.995 61.111 13.04 0.00 35.44 4.02
1965 2091 2.359169 ACCATGGCGACGAGGTCAT 61.359 57.895 13.04 0.00 35.44 3.06
1966 2092 1.884464 CCATGGCGACGAGGTCATG 60.884 63.158 14.96 14.96 46.85 3.07
1967 2093 2.202932 ATGGCGACGAGGTCATGC 60.203 61.111 0.00 0.00 29.48 4.06
1968 2094 3.740128 ATGGCGACGAGGTCATGCC 62.740 63.158 0.00 7.47 38.77 4.40
1978 2104 4.101790 GTCATGCCGGCGTGGTTG 62.102 66.667 40.57 23.53 41.21 3.77
1979 2105 4.321966 TCATGCCGGCGTGGTTGA 62.322 61.111 40.57 23.87 41.21 3.18
1980 2106 3.361158 CATGCCGGCGTGGTTGAA 61.361 61.111 36.30 11.28 41.21 2.69
1981 2107 2.596046 ATGCCGGCGTGGTTGAAA 60.596 55.556 23.19 0.00 41.21 2.69
1982 2108 2.914908 ATGCCGGCGTGGTTGAAAC 61.915 57.895 23.19 0.00 41.21 2.78
1983 2109 4.676586 GCCGGCGTGGTTGAAACG 62.677 66.667 12.58 0.00 43.81 3.60
1989 2115 3.142796 CGTGGTTGAAACGCAAGAC 57.857 52.632 0.00 0.00 37.12 3.01
2000 2126 3.730761 GCAAGACGCTGCCCTGTG 61.731 66.667 0.00 0.00 36.25 3.66
2001 2127 3.730761 CAAGACGCTGCCCTGTGC 61.731 66.667 0.00 0.00 41.77 4.57
2002 2128 3.946201 AAGACGCTGCCCTGTGCT 61.946 61.111 0.00 0.00 42.00 4.40
2003 2129 3.890936 AAGACGCTGCCCTGTGCTC 62.891 63.158 0.00 0.00 42.00 4.26
2004 2130 4.687215 GACGCTGCCCTGTGCTCA 62.687 66.667 0.00 0.00 42.00 4.26
2005 2131 4.996434 ACGCTGCCCTGTGCTCAC 62.996 66.667 0.00 0.00 42.00 3.51
2006 2132 4.994471 CGCTGCCCTGTGCTCACA 62.994 66.667 2.48 2.48 42.00 3.58
2007 2133 2.360852 GCTGCCCTGTGCTCACAT 60.361 61.111 2.90 0.00 41.01 3.21
2008 2134 2.697761 GCTGCCCTGTGCTCACATG 61.698 63.158 2.90 0.93 41.01 3.21
2009 2135 2.674033 TGCCCTGTGCTCACATGC 60.674 61.111 14.08 14.08 41.01 4.06
2010 2136 3.446570 GCCCTGTGCTCACATGCC 61.447 66.667 2.90 0.00 41.01 4.40
2011 2137 2.034532 CCCTGTGCTCACATGCCA 59.965 61.111 2.90 0.00 41.01 4.92
2012 2138 2.044555 CCCTGTGCTCACATGCCAG 61.045 63.158 2.90 0.00 41.01 4.85
2013 2139 2.044555 CCTGTGCTCACATGCCAGG 61.045 63.158 2.90 0.00 41.38 4.45
2014 2140 1.002990 CTGTGCTCACATGCCAGGA 60.003 57.895 2.90 0.00 41.01 3.86
2015 2141 1.002990 TGTGCTCACATGCCAGGAG 60.003 57.895 0.00 0.00 36.21 3.69
2042 2168 2.513204 CCTCATGTGCGGAGGCTG 60.513 66.667 0.00 0.00 44.95 4.85
2043 2169 2.513204 CTCATGTGCGGAGGCTGG 60.513 66.667 0.00 0.00 40.82 4.85
2044 2170 3.320879 CTCATGTGCGGAGGCTGGT 62.321 63.158 0.00 0.00 40.82 4.00
2045 2171 2.821366 CATGTGCGGAGGCTGGTC 60.821 66.667 0.00 0.00 40.82 4.02
2046 2172 4.457496 ATGTGCGGAGGCTGGTCG 62.457 66.667 0.00 0.00 40.82 4.79
2051 2177 3.382832 CGGAGGCTGGTCGTCCTT 61.383 66.667 0.00 0.00 45.27 3.36
2052 2178 2.266055 GGAGGCTGGTCGTCCTTG 59.734 66.667 0.00 0.00 44.33 3.61
2053 2179 2.283529 GGAGGCTGGTCGTCCTTGA 61.284 63.158 0.00 0.00 44.33 3.02
2054 2180 1.216710 GAGGCTGGTCGTCCTTGAG 59.783 63.158 0.00 0.00 31.71 3.02
2055 2181 2.232298 GAGGCTGGTCGTCCTTGAGG 62.232 65.000 0.00 0.00 31.71 3.86
2056 2182 2.584391 GGCTGGTCGTCCTTGAGGT 61.584 63.158 0.00 0.00 36.34 3.85
2057 2183 1.374758 GCTGGTCGTCCTTGAGGTG 60.375 63.158 0.00 0.00 36.34 4.00
2058 2184 1.374758 CTGGTCGTCCTTGAGGTGC 60.375 63.158 0.00 0.00 36.34 5.01
2059 2185 1.821061 CTGGTCGTCCTTGAGGTGCT 61.821 60.000 0.00 0.00 36.34 4.40
2060 2186 1.079750 GGTCGTCCTTGAGGTGCTC 60.080 63.158 0.00 0.00 36.34 4.26
2061 2187 1.444553 GTCGTCCTTGAGGTGCTCG 60.445 63.158 0.00 0.00 36.34 5.03
2062 2188 2.811317 CGTCCTTGAGGTGCTCGC 60.811 66.667 0.00 0.00 36.34 5.03
2063 2189 2.343758 GTCCTTGAGGTGCTCGCA 59.656 61.111 0.00 0.00 36.34 5.10
2064 2190 1.739562 GTCCTTGAGGTGCTCGCAG 60.740 63.158 0.00 0.00 36.34 5.18
2065 2191 2.435586 CCTTGAGGTGCTCGCAGG 60.436 66.667 0.00 0.00 32.35 4.85
2066 2192 3.123620 CTTGAGGTGCTCGCAGGC 61.124 66.667 0.00 0.00 32.35 4.85
2067 2193 4.704833 TTGAGGTGCTCGCAGGCC 62.705 66.667 0.00 0.00 32.35 5.19
2083 2209 4.489771 CCAGGGGCATCGGACACC 62.490 72.222 0.00 0.00 0.00 4.16
2084 2210 3.402681 CAGGGGCATCGGACACCT 61.403 66.667 0.00 0.00 0.00 4.00
2085 2211 3.083997 AGGGGCATCGGACACCTC 61.084 66.667 0.00 0.00 0.00 3.85
2086 2212 4.176752 GGGGCATCGGACACCTCC 62.177 72.222 0.00 0.00 0.00 4.30
2087 2213 3.083997 GGGCATCGGACACCTCCT 61.084 66.667 0.00 0.00 33.79 3.69
2088 2214 2.187946 GGCATCGGACACCTCCTG 59.812 66.667 0.00 0.00 33.79 3.86
2089 2215 2.660064 GGCATCGGACACCTCCTGT 61.660 63.158 0.00 0.00 33.79 4.00
2100 2226 4.900154 CTCCTGTCGAGGTTGCTC 57.100 61.111 0.00 0.00 40.76 4.26
2102 2228 1.867919 CTCCTGTCGAGGTTGCTCGT 61.868 60.000 0.00 0.00 45.91 4.18
2103 2229 1.006102 CCTGTCGAGGTTGCTCGTT 60.006 57.895 0.00 0.00 45.91 3.85
2104 2230 1.284982 CCTGTCGAGGTTGCTCGTTG 61.285 60.000 0.00 0.00 45.91 4.10
2105 2231 0.597637 CTGTCGAGGTTGCTCGTTGT 60.598 55.000 0.00 0.00 45.91 3.32
2106 2232 0.596600 TGTCGAGGTTGCTCGTTGTC 60.597 55.000 0.00 0.00 45.91 3.18
2107 2233 1.006571 TCGAGGTTGCTCGTTGTCC 60.007 57.895 0.00 0.00 45.91 4.02
2108 2234 2.027625 CGAGGTTGCTCGTTGTCCC 61.028 63.158 0.00 0.00 41.43 4.46
2109 2235 2.027625 GAGGTTGCTCGTTGTCCCG 61.028 63.158 0.00 0.00 0.00 5.14
2110 2236 3.047877 GGTTGCTCGTTGTCCCGG 61.048 66.667 0.00 0.00 0.00 5.73
2111 2237 2.029964 GTTGCTCGTTGTCCCGGA 59.970 61.111 0.73 0.00 0.00 5.14
2112 2238 2.027625 GTTGCTCGTTGTCCCGGAG 61.028 63.158 0.73 0.00 0.00 4.63
2133 2259 4.740922 TCCGGCGTGGACTAGTTA 57.259 55.556 6.01 0.00 43.74 2.24
2134 2260 2.959967 TCCGGCGTGGACTAGTTAA 58.040 52.632 6.01 0.00 43.74 2.01
2135 2261 1.255882 TCCGGCGTGGACTAGTTAAA 58.744 50.000 6.01 0.00 43.74 1.52
2136 2262 1.203052 TCCGGCGTGGACTAGTTAAAG 59.797 52.381 6.01 0.00 43.74 1.85
2137 2263 1.636988 CGGCGTGGACTAGTTAAAGG 58.363 55.000 0.00 0.00 0.00 3.11
2138 2264 1.203052 CGGCGTGGACTAGTTAAAGGA 59.797 52.381 0.00 0.00 0.00 3.36
2139 2265 2.734492 CGGCGTGGACTAGTTAAAGGAG 60.734 54.545 0.00 0.00 0.00 3.69
2140 2266 2.269172 GCGTGGACTAGTTAAAGGAGC 58.731 52.381 0.00 0.00 0.00 4.70
2141 2267 2.353406 GCGTGGACTAGTTAAAGGAGCA 60.353 50.000 0.00 0.00 0.00 4.26
2142 2268 3.512680 CGTGGACTAGTTAAAGGAGCAG 58.487 50.000 0.00 0.00 0.00 4.24
2143 2269 3.192844 CGTGGACTAGTTAAAGGAGCAGA 59.807 47.826 0.00 0.00 0.00 4.26
2144 2270 4.675671 CGTGGACTAGTTAAAGGAGCAGAG 60.676 50.000 0.00 0.00 0.00 3.35
2145 2271 3.769844 TGGACTAGTTAAAGGAGCAGAGG 59.230 47.826 0.00 0.00 0.00 3.69
2146 2272 3.770388 GGACTAGTTAAAGGAGCAGAGGT 59.230 47.826 0.00 0.00 0.00 3.85
2147 2273 4.382147 GGACTAGTTAAAGGAGCAGAGGTG 60.382 50.000 0.00 0.00 0.00 4.00
2148 2274 4.161102 ACTAGTTAAAGGAGCAGAGGTGT 58.839 43.478 0.00 0.00 0.00 4.16
2149 2275 3.409026 AGTTAAAGGAGCAGAGGTGTG 57.591 47.619 0.00 0.00 0.00 3.82
2150 2276 2.972713 AGTTAAAGGAGCAGAGGTGTGA 59.027 45.455 0.00 0.00 0.00 3.58
2151 2277 3.067833 GTTAAAGGAGCAGAGGTGTGAC 58.932 50.000 0.00 0.00 0.00 3.67
2152 2278 0.034059 AAAGGAGCAGAGGTGTGACG 59.966 55.000 0.00 0.00 0.00 4.35
2153 2279 0.827925 AAGGAGCAGAGGTGTGACGA 60.828 55.000 0.00 0.00 0.00 4.20
2154 2280 1.214062 GGAGCAGAGGTGTGACGAG 59.786 63.158 0.00 0.00 0.00 4.18
2155 2281 1.214062 GAGCAGAGGTGTGACGAGG 59.786 63.158 0.00 0.00 0.00 4.63
2156 2282 1.228583 AGCAGAGGTGTGACGAGGA 60.229 57.895 0.00 0.00 0.00 3.71
2157 2283 1.214062 GCAGAGGTGTGACGAGGAG 59.786 63.158 0.00 0.00 0.00 3.69
2158 2284 1.244697 GCAGAGGTGTGACGAGGAGA 61.245 60.000 0.00 0.00 0.00 3.71
2159 2285 0.523966 CAGAGGTGTGACGAGGAGAC 59.476 60.000 0.00 0.00 0.00 3.36
2160 2286 0.609681 AGAGGTGTGACGAGGAGACC 60.610 60.000 0.00 0.00 0.00 3.85
2161 2287 1.924320 GAGGTGTGACGAGGAGACCG 61.924 65.000 0.00 0.00 0.00 4.79
2162 2288 2.567049 GTGTGACGAGGAGACCGG 59.433 66.667 0.00 0.00 0.00 5.28
2163 2289 3.371063 TGTGACGAGGAGACCGGC 61.371 66.667 0.00 0.00 35.21 6.13
2164 2290 4.477975 GTGACGAGGAGACCGGCG 62.478 72.222 0.00 0.00 38.00 6.46
2166 2292 3.745803 GACGAGGAGACCGGCGTT 61.746 66.667 6.01 0.00 38.87 4.84
2167 2293 3.966026 GACGAGGAGACCGGCGTTG 62.966 68.421 6.01 0.00 38.87 4.10
2168 2294 4.796231 CGAGGAGACCGGCGTTGG 62.796 72.222 6.01 0.00 0.00 3.77
2169 2295 3.379445 GAGGAGACCGGCGTTGGA 61.379 66.667 6.01 0.00 0.00 3.53
2170 2296 3.358076 GAGGAGACCGGCGTTGGAG 62.358 68.421 6.01 0.00 0.00 3.86
2171 2297 4.452733 GGAGACCGGCGTTGGAGG 62.453 72.222 6.01 0.00 0.00 4.30
2172 2298 3.379445 GAGACCGGCGTTGGAGGA 61.379 66.667 6.01 0.00 0.00 3.71
2173 2299 3.358076 GAGACCGGCGTTGGAGGAG 62.358 68.421 6.01 0.00 0.00 3.69
2174 2300 3.379445 GACCGGCGTTGGAGGAGA 61.379 66.667 6.01 0.00 0.00 3.71
2175 2301 2.920912 ACCGGCGTTGGAGGAGAA 60.921 61.111 6.01 0.00 0.00 2.87
2176 2302 2.434359 CCGGCGTTGGAGGAGAAC 60.434 66.667 6.01 0.00 0.00 3.01
2177 2303 2.434359 CGGCGTTGGAGGAGAACC 60.434 66.667 0.00 0.00 0.00 3.62
2190 2316 4.482952 AGGAGAACCTAATTTACCCACG 57.517 45.455 0.00 0.00 45.83 4.94
2191 2317 3.842436 AGGAGAACCTAATTTACCCACGT 59.158 43.478 0.00 0.00 45.83 4.49
2192 2318 4.287845 AGGAGAACCTAATTTACCCACGTT 59.712 41.667 0.00 0.00 45.83 3.99
2193 2319 4.633126 GGAGAACCTAATTTACCCACGTTC 59.367 45.833 0.00 0.00 0.00 3.95
2194 2320 4.582869 AGAACCTAATTTACCCACGTTCC 58.417 43.478 0.00 0.00 30.80 3.62
2195 2321 3.354948 ACCTAATTTACCCACGTTCCC 57.645 47.619 0.00 0.00 0.00 3.97
2196 2322 2.643801 ACCTAATTTACCCACGTTCCCA 59.356 45.455 0.00 0.00 0.00 4.37
2197 2323 3.267551 ACCTAATTTACCCACGTTCCCAT 59.732 43.478 0.00 0.00 0.00 4.00
2198 2324 3.881089 CCTAATTTACCCACGTTCCCATC 59.119 47.826 0.00 0.00 0.00 3.51
2199 2325 3.732048 AATTTACCCACGTTCCCATCT 57.268 42.857 0.00 0.00 0.00 2.90
2200 2326 3.732048 ATTTACCCACGTTCCCATCTT 57.268 42.857 0.00 0.00 0.00 2.40
2201 2327 2.773993 TTACCCACGTTCCCATCTTC 57.226 50.000 0.00 0.00 0.00 2.87
2202 2328 0.533491 TACCCACGTTCCCATCTTCG 59.467 55.000 0.00 0.00 0.00 3.79
2203 2329 1.189524 ACCCACGTTCCCATCTTCGA 61.190 55.000 0.00 0.00 0.00 3.71
2204 2330 0.178068 CCCACGTTCCCATCTTCGAT 59.822 55.000 0.00 0.00 0.00 3.59
2205 2331 1.571919 CCACGTTCCCATCTTCGATC 58.428 55.000 0.00 0.00 0.00 3.69
2206 2332 1.571919 CACGTTCCCATCTTCGATCC 58.428 55.000 0.00 0.00 0.00 3.36
2207 2333 0.464452 ACGTTCCCATCTTCGATCCC 59.536 55.000 0.00 0.00 0.00 3.85
2208 2334 0.464036 CGTTCCCATCTTCGATCCCA 59.536 55.000 0.00 0.00 0.00 4.37
2209 2335 1.806623 CGTTCCCATCTTCGATCCCAC 60.807 57.143 0.00 0.00 0.00 4.61
2210 2336 0.837272 TTCCCATCTTCGATCCCACC 59.163 55.000 0.00 0.00 0.00 4.61
2211 2337 1.054406 TCCCATCTTCGATCCCACCC 61.054 60.000 0.00 0.00 0.00 4.61
2212 2338 1.451936 CCATCTTCGATCCCACCCC 59.548 63.158 0.00 0.00 0.00 4.95
2213 2339 1.056700 CCATCTTCGATCCCACCCCT 61.057 60.000 0.00 0.00 0.00 4.79
2214 2340 0.107456 CATCTTCGATCCCACCCCTG 59.893 60.000 0.00 0.00 0.00 4.45
2215 2341 1.700042 ATCTTCGATCCCACCCCTGC 61.700 60.000 0.00 0.00 0.00 4.85
2216 2342 2.609299 TTCGATCCCACCCCTGCA 60.609 61.111 0.00 0.00 0.00 4.41
2217 2343 2.599645 CTTCGATCCCACCCCTGCAG 62.600 65.000 6.78 6.78 0.00 4.41
2218 2344 4.181010 CGATCCCACCCCTGCAGG 62.181 72.222 26.87 26.87 0.00 4.85
2219 2345 4.512914 GATCCCACCCCTGCAGGC 62.513 72.222 28.39 7.14 0.00 4.85
2231 2357 2.820479 GCAGGCTGCAGAGCTCTG 60.820 66.667 34.82 34.82 45.44 3.35
2232 2358 2.663796 CAGGCTGCAGAGCTCTGT 59.336 61.111 37.25 19.84 45.44 3.41
2233 2359 1.448189 CAGGCTGCAGAGCTCTGTC 60.448 63.158 37.25 29.70 45.44 3.51
2234 2360 2.508887 GGCTGCAGAGCTCTGTCG 60.509 66.667 37.25 29.19 45.44 4.35
2235 2361 2.261052 GCTGCAGAGCTCTGTCGT 59.739 61.111 37.25 6.07 45.45 4.34
2236 2362 1.805134 GCTGCAGAGCTCTGTCGTC 60.805 63.158 37.25 24.24 45.45 4.20
2237 2363 1.513800 CTGCAGAGCTCTGTCGTCG 60.514 63.158 37.25 20.64 45.45 5.12
2238 2364 2.878520 GCAGAGCTCTGTCGTCGC 60.879 66.667 37.25 22.67 45.45 5.19
2239 2365 2.202544 CAGAGCTCTGTCGTCGCC 60.203 66.667 31.71 0.00 39.09 5.54
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 4.024048 CAGGTTCATGTTGTGGTACTTCAC 60.024 45.833 0.00 0.00 38.09 3.18
100 107 5.431765 GTGGAACAATCAGGATAGTGTGAT 58.568 41.667 0.00 0.00 44.16 3.06
228 282 8.148999 AGTTAATCACCCGATAAGTCCTAATTC 58.851 37.037 0.00 0.00 0.00 2.17
233 287 5.952347 AAGTTAATCACCCGATAAGTCCT 57.048 39.130 0.00 0.00 0.00 3.85
282 338 6.567959 CATACATGTGAGTGTCTATGTCTGT 58.432 40.000 9.11 0.00 35.55 3.41
320 376 9.998106 GTGATGTGTGTCTTTATAGGGTTATAT 57.002 33.333 0.00 0.00 0.00 0.86
358 416 4.854173 ACCACATATTTGACACCTATGCA 58.146 39.130 0.00 0.00 0.00 3.96
359 417 5.835113 AACCACATATTTGACACCTATGC 57.165 39.130 0.00 0.00 0.00 3.14
373 431 4.078537 CACACCAAGGATCAAACCACATA 58.921 43.478 0.00 0.00 0.00 2.29
388 446 1.072648 GGTTGTACCCTAGCACACCAA 59.927 52.381 0.00 0.00 30.04 3.67
458 520 4.839668 TTTTCCAGTTTGTAATCCCACG 57.160 40.909 0.00 0.00 0.00 4.94
464 526 6.257630 GCACACATGTTTTTCCAGTTTGTAAT 59.742 34.615 0.00 0.00 0.00 1.89
475 537 2.035066 AGGCAGAGCACACATGTTTTTC 59.965 45.455 0.00 0.00 0.00 2.29
481 544 0.892358 ACCAAGGCAGAGCACACATG 60.892 55.000 0.00 0.00 0.00 3.21
485 548 1.055849 TTAGACCAAGGCAGAGCACA 58.944 50.000 0.00 0.00 0.00 4.57
537 601 1.621814 TCGGATCGTTGTTTTCCCTCT 59.378 47.619 0.00 0.00 0.00 3.69
544 608 5.245301 TGGATATAGGATCGGATCGTTGTTT 59.755 40.000 17.29 4.12 0.00 2.83
552 616 9.494055 TTCTTTAAGATGGATATAGGATCGGAT 57.506 33.333 0.00 0.00 0.00 4.18
579 643 9.565090 CAAGATGAAACCTCATGGATAAAGATA 57.435 33.333 0.00 0.00 42.60 1.98
603 667 9.547753 CATGCTCTATATCATCATCATCATCAA 57.452 33.333 0.00 0.00 0.00 2.57
604 668 8.705594 ACATGCTCTATATCATCATCATCATCA 58.294 33.333 0.00 0.00 0.00 3.07
605 669 8.983724 CACATGCTCTATATCATCATCATCATC 58.016 37.037 0.00 0.00 0.00 2.92
606 670 7.442666 GCACATGCTCTATATCATCATCATCAT 59.557 37.037 0.00 0.00 38.21 2.45
607 671 6.761714 GCACATGCTCTATATCATCATCATCA 59.238 38.462 0.00 0.00 38.21 3.07
608 672 6.074249 CGCACATGCTCTATATCATCATCATC 60.074 42.308 1.82 0.00 39.32 2.92
609 673 5.753921 CGCACATGCTCTATATCATCATCAT 59.246 40.000 1.82 0.00 39.32 2.45
677 744 8.153221 TGATGGTAAATCTTTGGTAGTAGGAA 57.847 34.615 0.00 0.00 0.00 3.36
682 749 6.969043 TCCATGATGGTAAATCTTTGGTAGT 58.031 36.000 11.87 0.00 39.03 2.73
757 832 6.493189 TTTAAGACAGGCTCCCAAATTTTT 57.507 33.333 0.00 0.00 0.00 1.94
758 833 6.493189 TTTTAAGACAGGCTCCCAAATTTT 57.507 33.333 0.00 0.00 0.00 1.82
795 872 5.954296 ATCATGATCGTCCAAATGATTCC 57.046 39.130 1.18 0.00 36.58 3.01
796 873 7.377928 GTCAAATCATGATCGTCCAAATGATTC 59.622 37.037 9.06 3.03 44.81 2.52
797 874 7.198390 GTCAAATCATGATCGTCCAAATGATT 58.802 34.615 9.06 9.68 46.54 2.57
799 876 5.066375 GGTCAAATCATGATCGTCCAAATGA 59.934 40.000 9.06 1.78 40.97 2.57
800 877 5.163632 TGGTCAAATCATGATCGTCCAAATG 60.164 40.000 9.06 0.00 42.48 2.32
802 879 4.155826 GTGGTCAAATCATGATCGTCCAAA 59.844 41.667 18.90 3.04 42.48 3.28
804 881 3.270027 GTGGTCAAATCATGATCGTCCA 58.730 45.455 9.06 13.17 42.48 4.02
805 882 2.285220 CGTGGTCAAATCATGATCGTCC 59.715 50.000 9.06 10.85 42.48 4.79
806 883 3.186909 TCGTGGTCAAATCATGATCGTC 58.813 45.455 9.06 1.54 42.48 4.20
807 884 3.245518 TCGTGGTCAAATCATGATCGT 57.754 42.857 9.06 0.00 42.48 3.73
840 923 9.023962 AGGAATTCAATTAGAGCAATAACAACA 57.976 29.630 7.93 0.00 0.00 3.33
848 931 6.322201 GGATGGAAGGAATTCAATTAGAGCAA 59.678 38.462 7.93 0.00 0.00 3.91
854 937 7.976414 AACATGGATGGAAGGAATTCAATTA 57.024 32.000 7.93 0.00 0.00 1.40
873 956 5.917541 ATAGCCGTTTACCGAATAACATG 57.082 39.130 0.00 0.00 39.56 3.21
875 958 9.195411 CTATTTATAGCCGTTTACCGAATAACA 57.805 33.333 0.00 0.00 39.56 2.41
885 985 6.327104 TGGTTCCTCCTATTTATAGCCGTTTA 59.673 38.462 0.00 0.00 37.07 2.01
906 1017 5.394224 CGAGTGTAGTATGGATGTCTTGGTT 60.394 44.000 0.00 0.00 0.00 3.67
908 1019 4.098044 ACGAGTGTAGTATGGATGTCTTGG 59.902 45.833 0.00 0.00 0.00 3.61
923 1039 1.397343 GTGATGCGAGAGACGAGTGTA 59.603 52.381 0.00 0.00 45.77 2.90
948 1067 0.537143 TTGTGCTACAGGGCCAACAG 60.537 55.000 6.18 0.00 0.00 3.16
958 1077 4.394439 TGTGTAACTCACTTGTGCTACA 57.606 40.909 0.00 1.99 46.27 2.74
969 1088 2.357637 GCAGCTGGTTTTGTGTAACTCA 59.642 45.455 17.12 0.00 38.04 3.41
975 1094 1.134729 CCTTTGCAGCTGGTTTTGTGT 60.135 47.619 17.12 0.00 0.00 3.72
1089 1210 3.034721 CAACATTTGAGGTTGCAGCAT 57.965 42.857 2.05 0.00 39.16 3.79
1107 1228 0.031857 CGCAGCAATCAAACCCACAA 59.968 50.000 0.00 0.00 0.00 3.33
1209 1333 1.435515 GAAAACCTTGCGTGGCACA 59.564 52.632 19.09 0.00 38.71 4.57
1215 1339 2.596338 CCGGGGAAAACCTTGCGT 60.596 61.111 0.00 0.00 40.03 5.24
1224 1348 0.906775 ATCGCTAGTTTCCGGGGAAA 59.093 50.000 8.77 8.77 41.22 3.13
1279 1403 2.744787 GCACACTTGCTATGGAATCG 57.255 50.000 0.00 0.00 46.17 3.34
1303 1427 0.035458 AGCGAAACTTGCTAGGTGCT 59.965 50.000 0.00 0.00 41.87 4.40
1313 1437 0.655733 CGGAACACACAGCGAAACTT 59.344 50.000 0.00 0.00 0.00 2.66
1324 1449 5.637006 AGCTAAAAATAATGCGGAACACA 57.363 34.783 0.00 0.00 0.00 3.72
1325 1450 5.861787 ACAAGCTAAAAATAATGCGGAACAC 59.138 36.000 0.00 0.00 0.00 3.32
1326 1451 6.019779 ACAAGCTAAAAATAATGCGGAACA 57.980 33.333 0.00 0.00 0.00 3.18
1327 1452 8.628882 AATACAAGCTAAAAATAATGCGGAAC 57.371 30.769 0.00 0.00 0.00 3.62
1329 1454 7.284489 AGGAATACAAGCTAAAAATAATGCGGA 59.716 33.333 0.00 0.00 0.00 5.54
1331 1456 8.128582 TCAGGAATACAAGCTAAAAATAATGCG 58.871 33.333 0.00 0.00 0.00 4.73
1332 1457 9.971922 ATCAGGAATACAAGCTAAAAATAATGC 57.028 29.630 0.00 0.00 0.00 3.56
1385 1510 8.597167 TGCTACTGCAGGATATAAACTCATATT 58.403 33.333 19.93 0.00 45.31 1.28
1389 1514 5.869649 TGCTACTGCAGGATATAAACTCA 57.130 39.130 19.93 0.00 45.31 3.41
1424 1549 6.857777 ATCATTGCAGACACTTTATAGCTC 57.142 37.500 0.00 0.00 0.00 4.09
1438 1563 4.435425 CCCAACATGGTTTATCATTGCAG 58.565 43.478 0.00 0.00 35.17 4.41
1458 1583 5.351189 GGATGTTTGAATTATTTGTGTGCCC 59.649 40.000 0.00 0.00 0.00 5.36
1461 1586 8.815141 TGAAGGATGTTTGAATTATTTGTGTG 57.185 30.769 0.00 0.00 0.00 3.82
1513 1638 5.739752 TGATTCATGTTCGGCAGATTTAG 57.260 39.130 0.00 0.00 0.00 1.85
1561 1686 2.515071 GGCAGCCGAGATGAGGGAT 61.515 63.158 0.00 0.00 0.00 3.85
1614 1739 6.316390 CACCTAAAGGAAACATGTATGACTCC 59.684 42.308 0.00 0.80 38.94 3.85
1629 1755 6.323739 GCCATGAATTTTATCCACCTAAAGGA 59.676 38.462 2.23 0.00 39.97 3.36
1642 1768 3.764434 TGCTAAACCGGCCATGAATTTTA 59.236 39.130 0.00 0.00 0.00 1.52
1693 1819 8.857098 ACACTATTGAATAGTATGATGTACCGT 58.143 33.333 16.73 4.97 43.93 4.83
1694 1820 9.129209 CACACTATTGAATAGTATGATGTACCG 57.871 37.037 16.47 4.55 41.60 4.02
1695 1821 9.424319 CCACACTATTGAATAGTATGATGTACC 57.576 37.037 21.60 0.00 41.60 3.34
1696 1822 9.424319 CCCACACTATTGAATAGTATGATGTAC 57.576 37.037 21.60 0.00 41.60 2.90
1697 1823 9.154632 ACCCACACTATTGAATAGTATGATGTA 57.845 33.333 21.60 0.00 41.60 2.29
1698 1824 8.034313 ACCCACACTATTGAATAGTATGATGT 57.966 34.615 21.60 15.63 41.60 3.06
1699 1825 9.645059 CTACCCACACTATTGAATAGTATGATG 57.355 37.037 21.60 15.11 41.60 3.07
1700 1826 9.381038 ACTACCCACACTATTGAATAGTATGAT 57.619 33.333 21.60 13.11 41.60 2.45
1701 1827 8.777578 ACTACCCACACTATTGAATAGTATGA 57.222 34.615 21.60 4.66 41.60 2.15
1710 1836 9.429109 TCATCTAAATACTACCCACACTATTGA 57.571 33.333 0.00 0.00 0.00 2.57
1713 1839 9.830186 AGATCATCTAAATACTACCCACACTAT 57.170 33.333 0.00 0.00 0.00 2.12
1715 1841 9.656323 TTAGATCATCTAAATACTACCCACACT 57.344 33.333 4.50 0.00 36.14 3.55
1716 1842 9.694137 GTTAGATCATCTAAATACTACCCACAC 57.306 37.037 8.78 0.00 40.30 3.82
1717 1843 8.573885 CGTTAGATCATCTAAATACTACCCACA 58.426 37.037 8.78 0.00 40.30 4.17
1718 1844 8.027771 CCGTTAGATCATCTAAATACTACCCAC 58.972 40.741 8.78 0.00 40.30 4.61
1719 1845 7.727186 ACCGTTAGATCATCTAAATACTACCCA 59.273 37.037 8.78 0.00 40.30 4.51
1720 1846 8.120140 ACCGTTAGATCATCTAAATACTACCC 57.880 38.462 8.78 0.00 40.30 3.69
1727 1853 9.273016 CCATGTTAACCGTTAGATCATCTAAAT 57.727 33.333 8.78 0.00 40.30 1.40
1728 1854 8.479689 TCCATGTTAACCGTTAGATCATCTAAA 58.520 33.333 8.78 0.00 40.30 1.85
1729 1855 8.014070 TCCATGTTAACCGTTAGATCATCTAA 57.986 34.615 2.70 2.70 36.68 2.10
1730 1856 7.591421 TCCATGTTAACCGTTAGATCATCTA 57.409 36.000 2.48 0.00 0.00 1.98
1731 1857 6.479972 TCCATGTTAACCGTTAGATCATCT 57.520 37.500 2.48 0.00 0.00 2.90
1732 1858 6.089551 CGATCCATGTTAACCGTTAGATCATC 59.910 42.308 2.48 4.11 31.38 2.92
1733 1859 5.926542 CGATCCATGTTAACCGTTAGATCAT 59.073 40.000 2.48 8.17 31.38 2.45
1734 1860 5.286438 CGATCCATGTTAACCGTTAGATCA 58.714 41.667 2.48 6.75 31.38 2.92
1735 1861 4.684703 CCGATCCATGTTAACCGTTAGATC 59.315 45.833 2.48 7.04 0.00 2.75
1736 1862 4.100498 ACCGATCCATGTTAACCGTTAGAT 59.900 41.667 2.48 0.00 0.00 1.98
1737 1863 3.448301 ACCGATCCATGTTAACCGTTAGA 59.552 43.478 2.48 0.00 0.00 2.10
1738 1864 3.788937 ACCGATCCATGTTAACCGTTAG 58.211 45.455 2.48 0.00 0.00 2.34
1739 1865 3.891422 ACCGATCCATGTTAACCGTTA 57.109 42.857 2.48 0.00 0.00 3.18
1740 1866 2.773993 ACCGATCCATGTTAACCGTT 57.226 45.000 2.48 0.00 0.00 4.44
1741 1867 3.891422 TTACCGATCCATGTTAACCGT 57.109 42.857 2.48 0.00 0.00 4.83
1742 1868 5.744666 ATTTTACCGATCCATGTTAACCG 57.255 39.130 2.48 0.00 0.00 4.44
1743 1869 9.857957 TTTAAATTTTACCGATCCATGTTAACC 57.142 29.630 2.48 0.00 0.00 2.85
1747 1873 9.020731 AGAGTTTAAATTTTACCGATCCATGTT 57.979 29.630 0.00 0.00 0.00 2.71
1748 1874 8.575649 AGAGTTTAAATTTTACCGATCCATGT 57.424 30.769 0.00 0.00 0.00 3.21
1750 1876 9.338622 CCTAGAGTTTAAATTTTACCGATCCAT 57.661 33.333 0.00 0.00 0.00 3.41
1751 1877 8.542080 TCCTAGAGTTTAAATTTTACCGATCCA 58.458 33.333 0.00 0.00 0.00 3.41
1752 1878 8.953368 TCCTAGAGTTTAAATTTTACCGATCC 57.047 34.615 0.00 0.00 0.00 3.36
1813 1939 9.910267 TGAGATCAATCAGGATTAAATTGAGAA 57.090 29.630 0.00 0.00 41.32 2.87
1814 1940 9.334947 GTGAGATCAATCAGGATTAAATTGAGA 57.665 33.333 0.00 0.00 41.32 3.27
1815 1941 9.117183 TGTGAGATCAATCAGGATTAAATTGAG 57.883 33.333 0.00 0.00 41.32 3.02
1816 1942 9.465199 TTGTGAGATCAATCAGGATTAAATTGA 57.535 29.630 0.00 2.79 41.99 2.57
1817 1943 9.731819 CTTGTGAGATCAATCAGGATTAAATTG 57.268 33.333 0.00 0.00 0.00 2.32
1818 1944 9.471702 ACTTGTGAGATCAATCAGGATTAAATT 57.528 29.630 0.00 0.00 0.00 1.82
1819 1945 9.471702 AACTTGTGAGATCAATCAGGATTAAAT 57.528 29.630 0.00 0.00 0.00 1.40
1820 1946 8.868522 AACTTGTGAGATCAATCAGGATTAAA 57.131 30.769 0.00 0.00 0.00 1.52
1821 1947 9.958180 TTAACTTGTGAGATCAATCAGGATTAA 57.042 29.630 0.00 0.00 0.00 1.40
1822 1948 9.383519 GTTAACTTGTGAGATCAATCAGGATTA 57.616 33.333 0.00 0.00 0.00 1.75
1823 1949 8.105829 AGTTAACTTGTGAGATCAATCAGGATT 58.894 33.333 1.12 0.00 0.00 3.01
1824 1950 7.628234 AGTTAACTTGTGAGATCAATCAGGAT 58.372 34.615 1.12 0.00 0.00 3.24
1825 1951 7.009179 AGTTAACTTGTGAGATCAATCAGGA 57.991 36.000 1.12 0.00 0.00 3.86
1826 1952 8.777865 TTAGTTAACTTGTGAGATCAATCAGG 57.222 34.615 14.49 0.00 0.00 3.86
1832 1958 9.809096 GATGAGATTAGTTAACTTGTGAGATCA 57.191 33.333 14.49 9.61 0.00 2.92
1833 1959 9.255304 GGATGAGATTAGTTAACTTGTGAGATC 57.745 37.037 14.49 9.08 0.00 2.75
1834 1960 8.207545 GGGATGAGATTAGTTAACTTGTGAGAT 58.792 37.037 14.49 0.26 0.00 2.75
1835 1961 7.180229 TGGGATGAGATTAGTTAACTTGTGAGA 59.820 37.037 14.49 0.00 0.00 3.27
1836 1962 7.331026 TGGGATGAGATTAGTTAACTTGTGAG 58.669 38.462 14.49 0.00 0.00 3.51
1837 1963 7.252612 TGGGATGAGATTAGTTAACTTGTGA 57.747 36.000 14.49 0.00 0.00 3.58
1838 1964 7.227512 GGATGGGATGAGATTAGTTAACTTGTG 59.772 40.741 14.49 0.00 0.00 3.33
1839 1965 7.092444 TGGATGGGATGAGATTAGTTAACTTGT 60.092 37.037 14.49 2.64 0.00 3.16
1840 1966 7.227512 GTGGATGGGATGAGATTAGTTAACTTG 59.772 40.741 14.49 0.00 0.00 3.16
1841 1967 7.092444 TGTGGATGGGATGAGATTAGTTAACTT 60.092 37.037 14.49 0.00 0.00 2.66
1842 1968 6.386927 TGTGGATGGGATGAGATTAGTTAACT 59.613 38.462 13.68 13.68 0.00 2.24
1843 1969 6.483640 GTGTGGATGGGATGAGATTAGTTAAC 59.516 42.308 0.00 0.00 0.00 2.01
1844 1970 6.409234 GGTGTGGATGGGATGAGATTAGTTAA 60.409 42.308 0.00 0.00 0.00 2.01
1845 1971 5.071788 GGTGTGGATGGGATGAGATTAGTTA 59.928 44.000 0.00 0.00 0.00 2.24
1846 1972 4.141390 GGTGTGGATGGGATGAGATTAGTT 60.141 45.833 0.00 0.00 0.00 2.24
1847 1973 3.392616 GGTGTGGATGGGATGAGATTAGT 59.607 47.826 0.00 0.00 0.00 2.24
1848 1974 3.555795 CGGTGTGGATGGGATGAGATTAG 60.556 52.174 0.00 0.00 0.00 1.73
1849 1975 2.368548 CGGTGTGGATGGGATGAGATTA 59.631 50.000 0.00 0.00 0.00 1.75
1850 1976 1.141657 CGGTGTGGATGGGATGAGATT 59.858 52.381 0.00 0.00 0.00 2.40
1851 1977 0.761187 CGGTGTGGATGGGATGAGAT 59.239 55.000 0.00 0.00 0.00 2.75
1852 1978 0.617535 ACGGTGTGGATGGGATGAGA 60.618 55.000 0.00 0.00 0.00 3.27
1853 1979 0.179073 GACGGTGTGGATGGGATGAG 60.179 60.000 0.00 0.00 0.00 2.90
1854 1980 0.617535 AGACGGTGTGGATGGGATGA 60.618 55.000 0.00 0.00 0.00 2.92
1855 1981 0.179073 GAGACGGTGTGGATGGGATG 60.179 60.000 0.00 0.00 0.00 3.51
1856 1982 1.676678 CGAGACGGTGTGGATGGGAT 61.677 60.000 0.00 0.00 0.00 3.85
1857 1983 2.348104 CGAGACGGTGTGGATGGGA 61.348 63.158 0.00 0.00 0.00 4.37
1858 1984 2.167398 AACGAGACGGTGTGGATGGG 62.167 60.000 0.00 0.00 0.00 4.00
1859 1985 0.736325 GAACGAGACGGTGTGGATGG 60.736 60.000 0.00 0.00 0.00 3.51
1860 1986 1.071019 CGAACGAGACGGTGTGGATG 61.071 60.000 0.00 0.00 0.00 3.51
1861 1987 1.211969 CGAACGAGACGGTGTGGAT 59.788 57.895 0.00 0.00 0.00 3.41
1862 1988 2.121564 GACGAACGAGACGGTGTGGA 62.122 60.000 0.14 0.00 34.93 4.02
1863 1989 1.728426 GACGAACGAGACGGTGTGG 60.728 63.158 0.14 0.00 34.93 4.17
1864 1990 1.728426 GGACGAACGAGACGGTGTG 60.728 63.158 0.14 0.00 34.93 3.82
1865 1991 2.641559 GGACGAACGAGACGGTGT 59.358 61.111 0.14 0.00 34.93 4.16
1866 1992 2.501222 CGGACGAACGAGACGGTG 60.501 66.667 0.14 0.00 35.47 4.94
1867 1993 4.395583 GCGGACGAACGAGACGGT 62.396 66.667 7.62 0.00 35.47 4.83
1868 1994 2.743752 TAGCGGACGAACGAGACGG 61.744 63.158 7.62 0.00 35.47 4.79
1869 1995 1.579626 GTAGCGGACGAACGAGACG 60.580 63.158 7.62 3.76 35.47 4.18
1870 1996 0.247616 GAGTAGCGGACGAACGAGAC 60.248 60.000 7.62 4.46 35.47 3.36
1871 1997 0.390866 AGAGTAGCGGACGAACGAGA 60.391 55.000 7.62 0.00 35.47 4.04
1872 1998 0.026544 GAGAGTAGCGGACGAACGAG 59.973 60.000 7.62 0.00 35.47 4.18
1873 1999 1.690283 CGAGAGTAGCGGACGAACGA 61.690 60.000 7.62 0.00 35.47 3.85
1874 2000 1.296722 CGAGAGTAGCGGACGAACG 60.297 63.158 0.00 0.00 0.00 3.95
1875 2001 0.656785 ATCGAGAGTAGCGGACGAAC 59.343 55.000 0.00 0.00 36.62 3.95
1876 2002 0.656259 CATCGAGAGTAGCGGACGAA 59.344 55.000 0.00 0.00 36.62 3.85
1877 2003 1.773054 GCATCGAGAGTAGCGGACGA 61.773 60.000 0.00 0.00 37.39 4.20
1878 2004 1.369448 GCATCGAGAGTAGCGGACG 60.369 63.158 0.00 0.00 0.00 4.79
1879 2005 1.008309 GGCATCGAGAGTAGCGGAC 60.008 63.158 0.00 0.00 33.93 4.79
1880 2006 1.453197 TGGCATCGAGAGTAGCGGA 60.453 57.895 0.00 0.00 33.93 5.54
1881 2007 1.299468 GTGGCATCGAGAGTAGCGG 60.299 63.158 0.00 0.00 33.93 5.52
1882 2008 1.655654 CGTGGCATCGAGAGTAGCG 60.656 63.158 0.00 0.00 33.93 4.26
1883 2009 1.946650 GCGTGGCATCGAGAGTAGC 60.947 63.158 12.46 0.00 0.00 3.58
1884 2010 1.299468 GGCGTGGCATCGAGAGTAG 60.299 63.158 12.46 0.00 0.00 2.57
1885 2011 2.805546 GGCGTGGCATCGAGAGTA 59.194 61.111 12.46 0.00 0.00 2.59
1886 2012 4.498520 CGGCGTGGCATCGAGAGT 62.499 66.667 12.46 0.00 0.00 3.24
1889 2015 4.569023 TAGCGGCGTGGCATCGAG 62.569 66.667 9.37 7.15 34.64 4.04
1890 2016 4.865761 GTAGCGGCGTGGCATCGA 62.866 66.667 9.37 0.00 34.64 3.59
1891 2017 4.873129 AGTAGCGGCGTGGCATCG 62.873 66.667 9.37 0.00 34.64 3.84
1892 2018 3.264897 CAGTAGCGGCGTGGCATC 61.265 66.667 9.37 0.00 34.64 3.91
1903 2029 2.124529 GCCCAAGGGAGCAGTAGC 60.125 66.667 9.92 0.00 37.50 3.58
1904 2030 1.222936 CAGCCCAAGGGAGCAGTAG 59.777 63.158 9.92 0.00 37.50 2.57
1905 2031 2.971598 GCAGCCCAAGGGAGCAGTA 61.972 63.158 9.92 0.00 37.63 2.74
1906 2032 4.357279 GCAGCCCAAGGGAGCAGT 62.357 66.667 9.92 0.00 37.63 4.40
1924 2050 4.697756 TCCCGCAAAGCCACTCCG 62.698 66.667 0.00 0.00 0.00 4.63
1925 2051 2.747855 CTCCCGCAAAGCCACTCC 60.748 66.667 0.00 0.00 0.00 3.85
1926 2052 0.678048 ATTCTCCCGCAAAGCCACTC 60.678 55.000 0.00 0.00 0.00 3.51
1927 2053 0.678048 GATTCTCCCGCAAAGCCACT 60.678 55.000 0.00 0.00 0.00 4.00
1928 2054 0.960364 TGATTCTCCCGCAAAGCCAC 60.960 55.000 0.00 0.00 0.00 5.01
1929 2055 0.960364 GTGATTCTCCCGCAAAGCCA 60.960 55.000 0.00 0.00 0.00 4.75
1930 2056 1.657751 GGTGATTCTCCCGCAAAGCC 61.658 60.000 0.00 0.00 0.00 4.35
1931 2057 0.960364 TGGTGATTCTCCCGCAAAGC 60.960 55.000 2.43 0.00 0.00 3.51
1932 2058 1.402968 CATGGTGATTCTCCCGCAAAG 59.597 52.381 2.43 0.00 0.00 2.77
1933 2059 1.462616 CATGGTGATTCTCCCGCAAA 58.537 50.000 2.43 0.00 0.00 3.68
1934 2060 0.394216 CCATGGTGATTCTCCCGCAA 60.394 55.000 2.57 0.00 0.00 4.85
1935 2061 1.224315 CCATGGTGATTCTCCCGCA 59.776 57.895 2.57 0.00 0.00 5.69
1936 2062 2.189499 GCCATGGTGATTCTCCCGC 61.189 63.158 14.67 0.00 0.00 6.13
1937 2063 1.889105 CGCCATGGTGATTCTCCCG 60.889 63.158 21.19 3.65 0.00 5.14
1938 2064 0.815615 GTCGCCATGGTGATTCTCCC 60.816 60.000 29.82 12.96 36.98 4.30
1939 2065 1.154205 CGTCGCCATGGTGATTCTCC 61.154 60.000 29.82 15.90 36.98 3.71
1940 2066 0.179111 TCGTCGCCATGGTGATTCTC 60.179 55.000 29.82 16.26 36.98 2.87
1941 2067 0.179100 CTCGTCGCCATGGTGATTCT 60.179 55.000 29.82 0.00 36.98 2.40
1942 2068 1.154205 CCTCGTCGCCATGGTGATTC 61.154 60.000 29.82 17.32 36.98 2.52
1943 2069 1.153369 CCTCGTCGCCATGGTGATT 60.153 57.895 29.82 0.00 36.98 2.57
1944 2070 2.298158 GACCTCGTCGCCATGGTGAT 62.298 60.000 29.82 14.51 36.98 3.06
1945 2071 2.994995 ACCTCGTCGCCATGGTGA 60.995 61.111 24.20 24.20 0.00 4.02
1946 2072 2.509336 GACCTCGTCGCCATGGTG 60.509 66.667 19.75 19.75 32.30 4.17
1947 2073 2.359169 ATGACCTCGTCGCCATGGT 61.359 57.895 14.67 0.00 34.95 3.55
1948 2074 1.884464 CATGACCTCGTCGCCATGG 60.884 63.158 7.63 7.63 34.95 3.66
1949 2075 2.528743 GCATGACCTCGTCGCCATG 61.529 63.158 0.00 0.00 39.35 3.66
1950 2076 2.202932 GCATGACCTCGTCGCCAT 60.203 61.111 0.00 0.00 34.95 4.40
1951 2077 4.451150 GGCATGACCTCGTCGCCA 62.451 66.667 0.00 0.00 38.39 5.69
1961 2087 4.101790 CAACCACGCCGGCATGAC 62.102 66.667 26.68 0.00 39.03 3.06
1962 2088 3.834013 TTCAACCACGCCGGCATGA 62.834 57.895 26.68 17.08 39.03 3.07
1963 2089 2.913765 TTTCAACCACGCCGGCATG 61.914 57.895 28.98 23.40 39.03 4.06
1964 2090 2.596046 TTTCAACCACGCCGGCAT 60.596 55.556 28.98 8.91 39.03 4.40
1965 2091 3.587933 GTTTCAACCACGCCGGCA 61.588 61.111 28.98 0.53 39.03 5.69
1966 2092 4.676586 CGTTTCAACCACGCCGGC 62.677 66.667 19.07 19.07 39.03 6.13
1971 2097 0.653323 CGTCTTGCGTTTCAACCACG 60.653 55.000 0.00 0.00 40.75 4.94
1972 2098 0.928451 GCGTCTTGCGTTTCAACCAC 60.928 55.000 0.00 0.00 43.66 4.16
1973 2099 1.353804 GCGTCTTGCGTTTCAACCA 59.646 52.632 0.00 0.00 43.66 3.67
1974 2100 4.205584 GCGTCTTGCGTTTCAACC 57.794 55.556 0.00 0.00 43.66 3.77
1983 2109 3.730761 CACAGGGCAGCGTCTTGC 61.731 66.667 0.88 0.88 46.98 4.01
1984 2110 3.730761 GCACAGGGCAGCGTCTTG 61.731 66.667 0.00 0.00 43.97 3.02
1994 2120 2.034532 TGGCATGTGAGCACAGGG 59.965 61.111 15.81 8.61 45.48 4.45
1995 2121 2.044555 CCTGGCATGTGAGCACAGG 61.045 63.158 10.60 10.60 45.48 4.00
1996 2122 1.002990 TCCTGGCATGTGAGCACAG 60.003 57.895 9.37 3.19 45.48 3.66
1997 2123 1.002990 CTCCTGGCATGTGAGCACA 60.003 57.895 5.70 5.70 46.44 4.57
1998 2124 3.900855 CTCCTGGCATGTGAGCAC 58.099 61.111 0.00 0.00 35.83 4.40
2013 2139 1.890979 CATGAGGTGCCCGATGCTC 60.891 63.158 0.00 0.00 42.00 4.26
2014 2140 2.191375 CATGAGGTGCCCGATGCT 59.809 61.111 0.00 0.00 42.00 3.79
2015 2141 2.124570 ACATGAGGTGCCCGATGC 60.125 61.111 0.00 0.00 41.77 3.91
2016 2142 3.817787 CACATGAGGTGCCCGATG 58.182 61.111 0.00 0.00 41.36 3.84
2026 2152 2.513204 CCAGCCTCCGCACATGAG 60.513 66.667 0.00 0.00 37.52 2.90
2027 2153 3.315142 GACCAGCCTCCGCACATGA 62.315 63.158 0.00 0.00 37.52 3.07
2028 2154 2.821366 GACCAGCCTCCGCACATG 60.821 66.667 0.00 0.00 37.52 3.21
2029 2155 4.457496 CGACCAGCCTCCGCACAT 62.457 66.667 0.00 0.00 37.52 3.21
2034 2160 3.382832 AAGGACGACCAGCCTCCG 61.383 66.667 6.71 0.00 38.94 4.63
2035 2161 2.232298 CTCAAGGACGACCAGCCTCC 62.232 65.000 6.71 0.00 38.94 4.30
2036 2162 1.216710 CTCAAGGACGACCAGCCTC 59.783 63.158 6.71 0.00 38.94 4.70
2037 2163 2.286523 CCTCAAGGACGACCAGCCT 61.287 63.158 6.71 0.00 38.94 4.58
2038 2164 2.266055 CCTCAAGGACGACCAGCC 59.734 66.667 6.71 0.00 38.94 4.85
2039 2165 1.374758 CACCTCAAGGACGACCAGC 60.375 63.158 6.71 0.00 38.94 4.85
2040 2166 1.374758 GCACCTCAAGGACGACCAG 60.375 63.158 6.71 0.00 38.94 4.00
2041 2167 1.816863 GAGCACCTCAAGGACGACCA 61.817 60.000 6.71 0.00 38.94 4.02
2042 2168 1.079750 GAGCACCTCAAGGACGACC 60.080 63.158 2.30 0.00 38.94 4.79
2043 2169 1.444553 CGAGCACCTCAAGGACGAC 60.445 63.158 2.30 0.00 38.94 4.34
2044 2170 2.962569 CGAGCACCTCAAGGACGA 59.037 61.111 2.30 0.00 38.94 4.20
2045 2171 2.811317 GCGAGCACCTCAAGGACG 60.811 66.667 2.30 4.55 38.94 4.79
2046 2172 1.739562 CTGCGAGCACCTCAAGGAC 60.740 63.158 2.30 0.00 38.94 3.85
2047 2173 2.659016 CTGCGAGCACCTCAAGGA 59.341 61.111 2.30 0.00 38.94 3.36
2048 2174 2.435586 CCTGCGAGCACCTCAAGG 60.436 66.667 0.00 0.00 42.17 3.61
2049 2175 3.123620 GCCTGCGAGCACCTCAAG 61.124 66.667 0.00 0.00 0.00 3.02
2050 2176 4.704833 GGCCTGCGAGCACCTCAA 62.705 66.667 0.00 0.00 0.00 3.02
2066 2192 4.489771 GGTGTCCGATGCCCCTGG 62.490 72.222 0.00 0.00 0.00 4.45
2067 2193 3.391665 GAGGTGTCCGATGCCCCTG 62.392 68.421 0.00 0.00 0.00 4.45
2068 2194 3.083997 GAGGTGTCCGATGCCCCT 61.084 66.667 0.00 0.00 0.00 4.79
2069 2195 4.176752 GGAGGTGTCCGATGCCCC 62.177 72.222 0.00 0.00 31.37 5.80
2083 2209 4.900154 GAGCAACCTCGACAGGAG 57.100 61.111 0.00 0.00 43.65 3.69
2091 2217 2.027625 CGGGACAACGAGCAACCTC 61.028 63.158 0.00 0.00 35.47 3.85
2092 2218 2.030562 CGGGACAACGAGCAACCT 59.969 61.111 0.00 0.00 35.47 3.50
2093 2219 3.047877 CCGGGACAACGAGCAACC 61.048 66.667 0.00 0.00 35.47 3.77
2094 2220 2.027625 CTCCGGGACAACGAGCAAC 61.028 63.158 0.00 0.00 35.47 4.17
2095 2221 2.342279 CTCCGGGACAACGAGCAA 59.658 61.111 0.00 0.00 35.47 3.91
2096 2222 3.691342 CCTCCGGGACAACGAGCA 61.691 66.667 0.00 0.00 35.47 4.26
2097 2223 3.692406 ACCTCCGGGACAACGAGC 61.692 66.667 0.00 0.00 35.47 5.03
2098 2224 2.261671 CACCTCCGGGACAACGAG 59.738 66.667 0.00 0.00 35.47 4.18
2099 2225 2.522436 ACACCTCCGGGACAACGA 60.522 61.111 0.00 0.00 35.47 3.85
2100 2226 2.048503 GACACCTCCGGGACAACG 60.049 66.667 0.00 0.00 36.25 4.10
2101 2227 2.346365 GGACACCTCCGGGACAAC 59.654 66.667 0.00 0.00 36.25 3.32
2116 2242 1.203052 CTTTAACTAGTCCACGCCGGA 59.797 52.381 5.05 0.00 43.61 5.14
2117 2243 1.636988 CTTTAACTAGTCCACGCCGG 58.363 55.000 0.00 0.00 0.00 6.13
2118 2244 1.203052 TCCTTTAACTAGTCCACGCCG 59.797 52.381 0.00 0.00 0.00 6.46
2119 2245 2.889852 CTCCTTTAACTAGTCCACGCC 58.110 52.381 0.00 0.00 0.00 5.68
2120 2246 2.269172 GCTCCTTTAACTAGTCCACGC 58.731 52.381 0.00 0.00 0.00 5.34
2121 2247 3.192844 TCTGCTCCTTTAACTAGTCCACG 59.807 47.826 0.00 0.00 0.00 4.94
2122 2248 4.382147 CCTCTGCTCCTTTAACTAGTCCAC 60.382 50.000 0.00 0.00 0.00 4.02
2123 2249 3.769844 CCTCTGCTCCTTTAACTAGTCCA 59.230 47.826 0.00 0.00 0.00 4.02
2124 2250 3.770388 ACCTCTGCTCCTTTAACTAGTCC 59.230 47.826 0.00 0.00 0.00 3.85
2125 2251 4.221041 ACACCTCTGCTCCTTTAACTAGTC 59.779 45.833 0.00 0.00 0.00 2.59
2126 2252 4.021016 CACACCTCTGCTCCTTTAACTAGT 60.021 45.833 0.00 0.00 0.00 2.57
2127 2253 4.220821 TCACACCTCTGCTCCTTTAACTAG 59.779 45.833 0.00 0.00 0.00 2.57
2128 2254 4.021368 GTCACACCTCTGCTCCTTTAACTA 60.021 45.833 0.00 0.00 0.00 2.24
2129 2255 2.972713 TCACACCTCTGCTCCTTTAACT 59.027 45.455 0.00 0.00 0.00 2.24
2130 2256 3.067833 GTCACACCTCTGCTCCTTTAAC 58.932 50.000 0.00 0.00 0.00 2.01
2131 2257 2.288825 CGTCACACCTCTGCTCCTTTAA 60.289 50.000 0.00 0.00 0.00 1.52
2132 2258 1.272490 CGTCACACCTCTGCTCCTTTA 59.728 52.381 0.00 0.00 0.00 1.85
2133 2259 0.034059 CGTCACACCTCTGCTCCTTT 59.966 55.000 0.00 0.00 0.00 3.11
2134 2260 0.827925 TCGTCACACCTCTGCTCCTT 60.828 55.000 0.00 0.00 0.00 3.36
2135 2261 1.228583 TCGTCACACCTCTGCTCCT 60.229 57.895 0.00 0.00 0.00 3.69
2136 2262 1.214062 CTCGTCACACCTCTGCTCC 59.786 63.158 0.00 0.00 0.00 4.70
2137 2263 1.214062 CCTCGTCACACCTCTGCTC 59.786 63.158 0.00 0.00 0.00 4.26
2138 2264 1.228583 TCCTCGTCACACCTCTGCT 60.229 57.895 0.00 0.00 0.00 4.24
2139 2265 1.214062 CTCCTCGTCACACCTCTGC 59.786 63.158 0.00 0.00 0.00 4.26
2140 2266 0.523966 GTCTCCTCGTCACACCTCTG 59.476 60.000 0.00 0.00 0.00 3.35
2141 2267 0.609681 GGTCTCCTCGTCACACCTCT 60.610 60.000 0.00 0.00 0.00 3.69
2142 2268 1.884444 GGTCTCCTCGTCACACCTC 59.116 63.158 0.00 0.00 0.00 3.85
2143 2269 1.972223 CGGTCTCCTCGTCACACCT 60.972 63.158 0.00 0.00 0.00 4.00
2144 2270 2.567049 CGGTCTCCTCGTCACACC 59.433 66.667 0.00 0.00 0.00 4.16
2145 2271 2.567049 CCGGTCTCCTCGTCACAC 59.433 66.667 0.00 0.00 0.00 3.82
2146 2272 3.371063 GCCGGTCTCCTCGTCACA 61.371 66.667 1.90 0.00 0.00 3.58
2147 2273 4.477975 CGCCGGTCTCCTCGTCAC 62.478 72.222 1.90 0.00 0.00 3.67
2149 2275 3.745803 AACGCCGGTCTCCTCGTC 61.746 66.667 1.90 0.00 31.54 4.20
2150 2276 4.052229 CAACGCCGGTCTCCTCGT 62.052 66.667 1.90 0.00 33.40 4.18
2151 2277 4.796231 CCAACGCCGGTCTCCTCG 62.796 72.222 1.90 0.00 0.00 4.63
2152 2278 3.358076 CTCCAACGCCGGTCTCCTC 62.358 68.421 1.90 0.00 0.00 3.71
2153 2279 3.382832 CTCCAACGCCGGTCTCCT 61.383 66.667 1.90 0.00 0.00 3.69
2154 2280 4.452733 CCTCCAACGCCGGTCTCC 62.453 72.222 1.90 0.00 0.00 3.71
2155 2281 3.358076 CTCCTCCAACGCCGGTCTC 62.358 68.421 1.90 0.00 0.00 3.36
2156 2282 3.382832 CTCCTCCAACGCCGGTCT 61.383 66.667 1.90 0.00 0.00 3.85
2157 2283 2.939261 TTCTCCTCCAACGCCGGTC 61.939 63.158 1.90 0.00 0.00 4.79
2158 2284 2.920912 TTCTCCTCCAACGCCGGT 60.921 61.111 1.90 0.00 0.00 5.28
2159 2285 2.434359 GTTCTCCTCCAACGCCGG 60.434 66.667 0.00 0.00 0.00 6.13
2160 2286 1.601419 TAGGTTCTCCTCCAACGCCG 61.601 60.000 0.00 0.00 43.94 6.46
2161 2287 0.611714 TTAGGTTCTCCTCCAACGCC 59.388 55.000 0.00 0.00 43.94 5.68
2162 2288 2.693267 ATTAGGTTCTCCTCCAACGC 57.307 50.000 0.00 0.00 43.94 4.84
2163 2289 4.874396 GGTAAATTAGGTTCTCCTCCAACG 59.126 45.833 0.00 0.00 43.94 4.10
2164 2290 5.191426 GGGTAAATTAGGTTCTCCTCCAAC 58.809 45.833 0.00 0.00 43.94 3.77
2165 2291 4.853276 TGGGTAAATTAGGTTCTCCTCCAA 59.147 41.667 0.00 0.00 43.94 3.53
2166 2292 4.226620 GTGGGTAAATTAGGTTCTCCTCCA 59.773 45.833 0.00 0.00 43.94 3.86
2167 2293 4.682589 CGTGGGTAAATTAGGTTCTCCTCC 60.683 50.000 0.00 0.00 43.94 4.30
2168 2294 4.081254 ACGTGGGTAAATTAGGTTCTCCTC 60.081 45.833 0.00 0.00 43.94 3.71
2170 2296 4.212143 ACGTGGGTAAATTAGGTTCTCC 57.788 45.455 0.00 0.00 0.00 3.71
2171 2297 4.633126 GGAACGTGGGTAAATTAGGTTCTC 59.367 45.833 9.41 0.21 38.53 2.87
2172 2298 4.566278 GGGAACGTGGGTAAATTAGGTTCT 60.566 45.833 9.41 0.00 38.53 3.01
2173 2299 3.691118 GGGAACGTGGGTAAATTAGGTTC 59.309 47.826 0.00 0.00 38.05 3.62
2174 2300 3.074242 TGGGAACGTGGGTAAATTAGGTT 59.926 43.478 0.00 0.00 0.00 3.50
2175 2301 2.643801 TGGGAACGTGGGTAAATTAGGT 59.356 45.455 0.00 0.00 0.00 3.08
2176 2302 3.353370 TGGGAACGTGGGTAAATTAGG 57.647 47.619 0.00 0.00 0.00 2.69
2177 2303 4.777463 AGATGGGAACGTGGGTAAATTAG 58.223 43.478 0.00 0.00 0.00 1.73
2178 2304 4.847990 AGATGGGAACGTGGGTAAATTA 57.152 40.909 0.00 0.00 0.00 1.40
2179 2305 3.732048 AGATGGGAACGTGGGTAAATT 57.268 42.857 0.00 0.00 0.00 1.82
2180 2306 3.617284 GAAGATGGGAACGTGGGTAAAT 58.383 45.455 0.00 0.00 0.00 1.40
2181 2307 2.613474 CGAAGATGGGAACGTGGGTAAA 60.613 50.000 0.00 0.00 0.00 2.01
2182 2308 1.066716 CGAAGATGGGAACGTGGGTAA 60.067 52.381 0.00 0.00 0.00 2.85
2183 2309 0.533491 CGAAGATGGGAACGTGGGTA 59.467 55.000 0.00 0.00 0.00 3.69
2184 2310 1.189524 TCGAAGATGGGAACGTGGGT 61.190 55.000 0.00 0.00 0.00 4.51
2185 2311 0.178068 ATCGAAGATGGGAACGTGGG 59.822 55.000 0.00 0.00 45.12 4.61
2186 2312 1.571919 GATCGAAGATGGGAACGTGG 58.428 55.000 0.00 0.00 45.12 4.94
2187 2313 1.571919 GGATCGAAGATGGGAACGTG 58.428 55.000 0.00 0.00 45.12 4.49
2188 2314 0.464452 GGGATCGAAGATGGGAACGT 59.536 55.000 0.00 0.00 45.12 3.99
2189 2315 0.464036 TGGGATCGAAGATGGGAACG 59.536 55.000 0.00 0.00 45.12 3.95
2190 2316 1.475213 GGTGGGATCGAAGATGGGAAC 60.475 57.143 0.00 0.00 45.12 3.62
2191 2317 0.837272 GGTGGGATCGAAGATGGGAA 59.163 55.000 0.00 0.00 45.12 3.97
2192 2318 1.054406 GGGTGGGATCGAAGATGGGA 61.054 60.000 0.00 0.00 45.12 4.37
2193 2319 1.451936 GGGTGGGATCGAAGATGGG 59.548 63.158 0.00 0.00 45.12 4.00
2194 2320 1.056700 AGGGGTGGGATCGAAGATGG 61.057 60.000 0.00 0.00 45.12 3.51
2195 2321 0.107456 CAGGGGTGGGATCGAAGATG 59.893 60.000 0.00 0.00 45.12 2.90
2196 2322 1.700042 GCAGGGGTGGGATCGAAGAT 61.700 60.000 0.00 0.00 45.12 2.40
2197 2323 2.367202 GCAGGGGTGGGATCGAAGA 61.367 63.158 0.00 0.00 45.75 2.87
2198 2324 2.190578 GCAGGGGTGGGATCGAAG 59.809 66.667 0.00 0.00 0.00 3.79
2199 2325 2.609299 TGCAGGGGTGGGATCGAA 60.609 61.111 0.00 0.00 0.00 3.71
2200 2326 3.083349 CTGCAGGGGTGGGATCGA 61.083 66.667 5.57 0.00 0.00 3.59
2201 2327 4.181010 CCTGCAGGGGTGGGATCG 62.181 72.222 26.14 0.00 0.00 3.69
2202 2328 4.512914 GCCTGCAGGGGTGGGATC 62.513 72.222 33.46 10.92 35.18 3.36


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.