Multiple sequence alignment - TraesCS6A01G055500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G055500 chr6A 100.000 2303 0 0 1 2303 29091367 29089065 0.000000e+00 4253
1 TraesCS6A01G055500 chr6A 80.676 207 33 6 419 623 495442922 495442721 1.100000e-33 154
2 TraesCS6A01G055500 chr6A 88.618 123 7 4 289 405 29118900 29118779 2.390000e-30 143
3 TraesCS6A01G055500 chr6A 81.818 132 15 6 285 408 28718067 28718197 4.050000e-18 102
4 TraesCS6A01G055500 chr6D 95.018 562 15 4 1738 2299 3011922 3012470 0.000000e+00 870
5 TraesCS6A01G055500 chr6B 96.454 423 14 1 1 423 54870534 54870955 0.000000e+00 697
6 TraesCS6A01G055500 chr6B 82.051 195 31 4 431 623 142690493 142690685 1.830000e-36 163
7 TraesCS6A01G055500 chr6B 88.000 125 8 4 285 403 55416571 55416448 8.580000e-30 141
8 TraesCS6A01G055500 chr1A 84.224 767 49 31 585 1300 275764031 275764776 0.000000e+00 680
9 TraesCS6A01G055500 chr1A 88.869 566 36 10 1304 1844 275764988 275765551 0.000000e+00 671
10 TraesCS6A01G055500 chr1A 92.476 412 20 2 1888 2299 275765556 275765956 1.530000e-161 579
11 TraesCS6A01G055500 chr1A 89.032 155 16 1 425 578 275763290 275763444 8.400000e-45 191
12 TraesCS6A01G055500 chrUn 79.333 450 47 22 1 405 103522865 103523313 8.110000e-70 274
13 TraesCS6A01G055500 chrUn 80.193 207 37 4 422 627 46035063 46035266 3.960000e-33 152
14 TraesCS6A01G055500 chr5A 81.193 218 35 5 428 642 492997669 492997455 1.090000e-38 171
15 TraesCS6A01G055500 chr4A 83.422 187 28 3 423 608 592536647 592536831 1.090000e-38 171
16 TraesCS6A01G055500 chr4A 83.422 187 28 3 423 608 593105191 593105375 1.090000e-38 171
17 TraesCS6A01G055500 chr4A 82.353 187 30 3 423 608 591507070 591506886 2.370000e-35 159
18 TraesCS6A01G055500 chr4B 76.974 304 52 13 1767 2059 177238388 177238092 8.520000e-35 158
19 TraesCS6A01G055500 chr7A 81.026 195 33 4 431 623 561606219 561606411 3.960000e-33 152


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G055500 chr6A 29089065 29091367 2302 True 4253.00 4253 100.00000 1 2303 1 chr6A.!!$R1 2302
1 TraesCS6A01G055500 chr6D 3011922 3012470 548 False 870.00 870 95.01800 1738 2299 1 chr6D.!!$F1 561
2 TraesCS6A01G055500 chr1A 275763290 275765956 2666 False 530.25 680 88.65025 425 2299 4 chr1A.!!$F1 1874

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
204 205 0.036010 CCTTCTGAAGGCACGTCCAT 60.036 55.0 22.55 0.0 42.78 3.41 F
796 1380 0.036952 CTCTTCTGAGAAAGCCGCCA 60.037 55.0 0.00 0.0 42.73 5.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1256 1882 0.535780 TGTTGTGAAGCTGCTGAGGG 60.536 55.000 1.35 0.0 0.0 4.30 R
1654 2494 1.279271 GCTTGAGTAAAGGAGGCAGGA 59.721 52.381 0.00 0.0 36.3 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.409026 GTGGACCTTCTCATGAAGTGT 57.591 47.619 0.00 3.28 46.07 3.55
21 22 3.744660 GTGGACCTTCTCATGAAGTGTT 58.255 45.455 0.00 0.00 46.07 3.32
22 23 3.748568 GTGGACCTTCTCATGAAGTGTTC 59.251 47.826 0.00 3.11 46.07 3.18
23 24 3.244561 TGGACCTTCTCATGAAGTGTTCC 60.245 47.826 0.00 1.26 46.07 3.62
24 25 3.008485 GGACCTTCTCATGAAGTGTTCCT 59.992 47.826 0.00 0.00 46.07 3.36
25 26 4.249661 GACCTTCTCATGAAGTGTTCCTC 58.750 47.826 0.00 0.00 46.07 3.71
26 27 3.906846 ACCTTCTCATGAAGTGTTCCTCT 59.093 43.478 0.00 0.00 46.07 3.69
27 28 4.252073 CCTTCTCATGAAGTGTTCCTCTG 58.748 47.826 0.00 0.00 46.07 3.35
28 29 4.262808 CCTTCTCATGAAGTGTTCCTCTGT 60.263 45.833 0.00 0.00 46.07 3.41
29 30 5.047021 CCTTCTCATGAAGTGTTCCTCTGTA 60.047 44.000 0.00 0.00 46.07 2.74
30 31 6.351711 CCTTCTCATGAAGTGTTCCTCTGTAT 60.352 42.308 0.00 0.00 46.07 2.29
31 32 7.147828 CCTTCTCATGAAGTGTTCCTCTGTATA 60.148 40.741 0.00 0.00 46.07 1.47
32 33 7.904558 TCTCATGAAGTGTTCCTCTGTATAT 57.095 36.000 0.00 0.00 0.00 0.86
33 34 8.311395 TCTCATGAAGTGTTCCTCTGTATATT 57.689 34.615 0.00 0.00 0.00 1.28
34 35 8.417106 TCTCATGAAGTGTTCCTCTGTATATTC 58.583 37.037 0.00 0.00 0.00 1.75
35 36 8.311395 TCATGAAGTGTTCCTCTGTATATTCT 57.689 34.615 0.00 0.00 0.00 2.40
36 37 8.762645 TCATGAAGTGTTCCTCTGTATATTCTT 58.237 33.333 0.00 0.00 0.00 2.52
37 38 9.388506 CATGAAGTGTTCCTCTGTATATTCTTT 57.611 33.333 0.00 0.00 0.00 2.52
59 60 8.825745 TCTTTATTTTCTTTGATTTGTTGCACC 58.174 29.630 0.00 0.00 0.00 5.01
60 61 8.498054 TTTATTTTCTTTGATTTGTTGCACCA 57.502 26.923 0.00 0.00 0.00 4.17
61 62 6.607735 ATTTTCTTTGATTTGTTGCACCAG 57.392 33.333 0.00 0.00 0.00 4.00
62 63 3.731652 TCTTTGATTTGTTGCACCAGG 57.268 42.857 0.00 0.00 0.00 4.45
63 64 3.295093 TCTTTGATTTGTTGCACCAGGA 58.705 40.909 0.00 0.00 0.00 3.86
64 65 3.068024 TCTTTGATTTGTTGCACCAGGAC 59.932 43.478 0.00 0.00 0.00 3.85
65 66 2.363306 TGATTTGTTGCACCAGGACT 57.637 45.000 0.00 0.00 0.00 3.85
66 67 2.665165 TGATTTGTTGCACCAGGACTT 58.335 42.857 0.00 0.00 0.00 3.01
67 68 3.030291 TGATTTGTTGCACCAGGACTTT 58.970 40.909 0.00 0.00 0.00 2.66
68 69 3.450457 TGATTTGTTGCACCAGGACTTTT 59.550 39.130 0.00 0.00 0.00 2.27
69 70 3.971245 TTTGTTGCACCAGGACTTTTT 57.029 38.095 0.00 0.00 0.00 1.94
70 71 5.127845 TGATTTGTTGCACCAGGACTTTTTA 59.872 36.000 0.00 0.00 0.00 1.52
71 72 5.407407 TTTGTTGCACCAGGACTTTTTAA 57.593 34.783 0.00 0.00 0.00 1.52
72 73 4.647424 TGTTGCACCAGGACTTTTTAAG 57.353 40.909 0.00 0.00 0.00 1.85
73 74 4.020543 TGTTGCACCAGGACTTTTTAAGT 58.979 39.130 0.00 0.00 46.38 2.24
74 75 5.194432 TGTTGCACCAGGACTTTTTAAGTA 58.806 37.500 0.00 0.00 43.03 2.24
75 76 5.652891 TGTTGCACCAGGACTTTTTAAGTAA 59.347 36.000 0.00 0.00 43.03 2.24
76 77 6.322712 TGTTGCACCAGGACTTTTTAAGTAAT 59.677 34.615 0.00 0.00 43.03 1.89
77 78 6.969993 TGCACCAGGACTTTTTAAGTAATT 57.030 33.333 0.00 0.00 43.03 1.40
78 79 6.744112 TGCACCAGGACTTTTTAAGTAATTG 58.256 36.000 0.00 0.00 43.03 2.32
79 80 5.633601 GCACCAGGACTTTTTAAGTAATTGC 59.366 40.000 0.00 0.00 43.03 3.56
80 81 6.516693 GCACCAGGACTTTTTAAGTAATTGCT 60.517 38.462 0.00 0.00 43.03 3.91
81 82 7.084486 CACCAGGACTTTTTAAGTAATTGCTC 58.916 38.462 0.00 0.00 43.03 4.26
82 83 6.072673 ACCAGGACTTTTTAAGTAATTGCTCG 60.073 38.462 0.00 0.00 43.03 5.03
83 84 5.795441 CAGGACTTTTTAAGTAATTGCTCGC 59.205 40.000 0.00 0.00 43.03 5.03
84 85 5.705905 AGGACTTTTTAAGTAATTGCTCGCT 59.294 36.000 0.00 0.00 43.03 4.93
85 86 6.022208 GGACTTTTTAAGTAATTGCTCGCTC 58.978 40.000 0.00 0.00 43.03 5.03
86 87 6.128254 GGACTTTTTAAGTAATTGCTCGCTCT 60.128 38.462 0.00 0.00 43.03 4.09
87 88 6.832804 ACTTTTTAAGTAATTGCTCGCTCTC 58.167 36.000 0.00 0.00 40.69 3.20
88 89 6.651225 ACTTTTTAAGTAATTGCTCGCTCTCT 59.349 34.615 0.00 0.00 40.69 3.10
89 90 7.173390 ACTTTTTAAGTAATTGCTCGCTCTCTT 59.827 33.333 0.00 0.00 40.69 2.85
90 91 6.408858 TTTAAGTAATTGCTCGCTCTCTTG 57.591 37.500 0.00 0.00 0.00 3.02
91 92 2.898705 AGTAATTGCTCGCTCTCTTGG 58.101 47.619 0.00 0.00 0.00 3.61
92 93 1.936547 GTAATTGCTCGCTCTCTTGGG 59.063 52.381 0.00 0.00 0.00 4.12
93 94 0.326264 AATTGCTCGCTCTCTTGGGT 59.674 50.000 0.00 0.00 0.00 4.51
94 95 1.195115 ATTGCTCGCTCTCTTGGGTA 58.805 50.000 0.00 0.00 0.00 3.69
95 96 1.195115 TTGCTCGCTCTCTTGGGTAT 58.805 50.000 0.00 0.00 0.00 2.73
96 97 1.195115 TGCTCGCTCTCTTGGGTATT 58.805 50.000 0.00 0.00 0.00 1.89
97 98 1.555075 TGCTCGCTCTCTTGGGTATTT 59.445 47.619 0.00 0.00 0.00 1.40
98 99 1.936547 GCTCGCTCTCTTGGGTATTTG 59.063 52.381 0.00 0.00 0.00 2.32
99 100 2.678190 GCTCGCTCTCTTGGGTATTTGT 60.678 50.000 0.00 0.00 0.00 2.83
100 101 3.430374 GCTCGCTCTCTTGGGTATTTGTA 60.430 47.826 0.00 0.00 0.00 2.41
101 102 4.740934 GCTCGCTCTCTTGGGTATTTGTAT 60.741 45.833 0.00 0.00 0.00 2.29
102 103 4.693283 TCGCTCTCTTGGGTATTTGTATG 58.307 43.478 0.00 0.00 0.00 2.39
103 104 3.248602 CGCTCTCTTGGGTATTTGTATGC 59.751 47.826 0.00 0.00 0.00 3.14
104 105 3.565902 GCTCTCTTGGGTATTTGTATGCC 59.434 47.826 0.00 0.00 35.92 4.40
105 106 3.804036 TCTCTTGGGTATTTGTATGCCG 58.196 45.455 0.00 0.00 37.40 5.69
106 107 2.290641 CTCTTGGGTATTTGTATGCCGC 59.709 50.000 0.00 0.00 37.40 6.53
107 108 1.002900 CTTGGGTATTTGTATGCCGCG 60.003 52.381 0.00 0.00 37.40 6.46
108 109 0.178301 TGGGTATTTGTATGCCGCGA 59.822 50.000 8.23 0.00 37.40 5.87
109 110 1.301423 GGGTATTTGTATGCCGCGAA 58.699 50.000 8.23 0.00 37.40 4.70
110 111 1.003223 GGGTATTTGTATGCCGCGAAC 60.003 52.381 8.23 0.00 37.40 3.95
111 112 1.666700 GGTATTTGTATGCCGCGAACA 59.333 47.619 8.23 5.84 0.00 3.18
112 113 2.286184 GGTATTTGTATGCCGCGAACAG 60.286 50.000 8.23 0.00 0.00 3.16
113 114 1.448985 ATTTGTATGCCGCGAACAGT 58.551 45.000 8.23 0.00 0.00 3.55
114 115 2.081725 TTTGTATGCCGCGAACAGTA 57.918 45.000 8.23 0.00 0.00 2.74
115 116 1.352114 TTGTATGCCGCGAACAGTAC 58.648 50.000 8.23 10.38 0.00 2.73
116 117 0.799152 TGTATGCCGCGAACAGTACG 60.799 55.000 8.23 0.00 0.00 3.67
120 121 2.431942 CCGCGAACAGTACGGCTT 60.432 61.111 8.23 0.00 40.55 4.35
121 122 2.726691 CCGCGAACAGTACGGCTTG 61.727 63.158 8.23 0.00 40.55 4.01
122 123 2.019951 CGCGAACAGTACGGCTTGT 61.020 57.895 0.00 0.00 0.00 3.16
123 124 1.554042 CGCGAACAGTACGGCTTGTT 61.554 55.000 0.00 0.00 0.00 2.83
124 125 0.584876 GCGAACAGTACGGCTTGTTT 59.415 50.000 0.37 0.00 0.00 2.83
125 126 1.398071 GCGAACAGTACGGCTTGTTTC 60.398 52.381 0.37 0.00 0.00 2.78
126 127 2.132762 CGAACAGTACGGCTTGTTTCT 58.867 47.619 0.37 0.00 0.00 2.52
127 128 2.096909 CGAACAGTACGGCTTGTTTCTG 60.097 50.000 0.37 10.36 37.35 3.02
128 129 2.614829 ACAGTACGGCTTGTTTCTGT 57.385 45.000 0.00 11.19 38.66 3.41
129 130 2.914059 ACAGTACGGCTTGTTTCTGTT 58.086 42.857 0.00 2.28 39.66 3.16
130 131 3.275999 ACAGTACGGCTTGTTTCTGTTT 58.724 40.909 0.00 0.00 39.66 2.83
131 132 3.692593 ACAGTACGGCTTGTTTCTGTTTT 59.307 39.130 0.00 0.00 39.66 2.43
132 133 4.201881 ACAGTACGGCTTGTTTCTGTTTTC 60.202 41.667 0.00 0.00 39.66 2.29
133 134 4.035208 CAGTACGGCTTGTTTCTGTTTTCT 59.965 41.667 0.00 0.00 31.30 2.52
134 135 4.638865 AGTACGGCTTGTTTCTGTTTTCTT 59.361 37.500 0.00 0.00 0.00 2.52
135 136 4.450082 ACGGCTTGTTTCTGTTTTCTTT 57.550 36.364 0.00 0.00 0.00 2.52
136 137 4.421058 ACGGCTTGTTTCTGTTTTCTTTC 58.579 39.130 0.00 0.00 0.00 2.62
137 138 3.796717 CGGCTTGTTTCTGTTTTCTTTCC 59.203 43.478 0.00 0.00 0.00 3.13
138 139 3.796717 GGCTTGTTTCTGTTTTCTTTCCG 59.203 43.478 0.00 0.00 0.00 4.30
139 140 4.439563 GGCTTGTTTCTGTTTTCTTTCCGA 60.440 41.667 0.00 0.00 0.00 4.55
140 141 4.499399 GCTTGTTTCTGTTTTCTTTCCGAC 59.501 41.667 0.00 0.00 0.00 4.79
141 142 5.676331 GCTTGTTTCTGTTTTCTTTCCGACT 60.676 40.000 0.00 0.00 0.00 4.18
142 143 5.890424 TGTTTCTGTTTTCTTTCCGACTT 57.110 34.783 0.00 0.00 0.00 3.01
143 144 5.636837 TGTTTCTGTTTTCTTTCCGACTTG 58.363 37.500 0.00 0.00 0.00 3.16
144 145 5.413213 TGTTTCTGTTTTCTTTCCGACTTGA 59.587 36.000 0.00 0.00 0.00 3.02
145 146 6.094881 TGTTTCTGTTTTCTTTCCGACTTGAT 59.905 34.615 0.00 0.00 0.00 2.57
146 147 5.924475 TCTGTTTTCTTTCCGACTTGATC 57.076 39.130 0.00 0.00 0.00 2.92
157 158 2.181205 CGACTTGATCGTCTTCTCTGC 58.819 52.381 0.22 0.00 46.25 4.26
158 159 2.414691 CGACTTGATCGTCTTCTCTGCA 60.415 50.000 0.00 0.00 46.25 4.41
159 160 3.733380 CGACTTGATCGTCTTCTCTGCAT 60.733 47.826 0.00 0.00 46.25 3.96
160 161 3.519579 ACTTGATCGTCTTCTCTGCATG 58.480 45.455 0.00 0.00 0.00 4.06
161 162 1.931906 TGATCGTCTTCTCTGCATGC 58.068 50.000 11.82 11.82 0.00 4.06
162 163 1.216122 GATCGTCTTCTCTGCATGCC 58.784 55.000 16.68 0.00 0.00 4.40
163 164 0.829333 ATCGTCTTCTCTGCATGCCT 59.171 50.000 16.68 0.00 0.00 4.75
164 165 0.610174 TCGTCTTCTCTGCATGCCTT 59.390 50.000 16.68 0.00 0.00 4.35
165 166 1.005340 CGTCTTCTCTGCATGCCTTC 58.995 55.000 16.68 0.00 0.00 3.46
166 167 1.005340 GTCTTCTCTGCATGCCTTCG 58.995 55.000 16.68 0.92 0.00 3.79
167 168 0.742281 TCTTCTCTGCATGCCTTCGC 60.742 55.000 16.68 0.00 0.00 4.70
168 169 0.743701 CTTCTCTGCATGCCTTCGCT 60.744 55.000 16.68 0.00 35.36 4.93
169 170 0.321919 TTCTCTGCATGCCTTCGCTT 60.322 50.000 16.68 0.00 35.36 4.68
170 171 0.536724 TCTCTGCATGCCTTCGCTTA 59.463 50.000 16.68 0.00 35.36 3.09
171 172 1.066215 TCTCTGCATGCCTTCGCTTAA 60.066 47.619 16.68 0.00 35.36 1.85
172 173 1.945394 CTCTGCATGCCTTCGCTTAAT 59.055 47.619 16.68 0.00 35.36 1.40
173 174 2.357009 CTCTGCATGCCTTCGCTTAATT 59.643 45.455 16.68 0.00 35.36 1.40
174 175 2.754552 TCTGCATGCCTTCGCTTAATTT 59.245 40.909 16.68 0.00 35.36 1.82
175 176 3.111098 CTGCATGCCTTCGCTTAATTTC 58.889 45.455 16.68 0.00 35.36 2.17
176 177 2.491298 TGCATGCCTTCGCTTAATTTCA 59.509 40.909 16.68 0.00 35.36 2.69
177 178 3.111098 GCATGCCTTCGCTTAATTTCAG 58.889 45.455 6.36 0.00 35.36 3.02
178 179 3.699067 CATGCCTTCGCTTAATTTCAGG 58.301 45.455 0.00 0.00 35.36 3.86
179 180 2.790433 TGCCTTCGCTTAATTTCAGGT 58.210 42.857 0.00 0.00 35.36 4.00
180 181 2.747446 TGCCTTCGCTTAATTTCAGGTC 59.253 45.455 0.00 0.00 35.36 3.85
181 182 2.097629 GCCTTCGCTTAATTTCAGGTCC 59.902 50.000 0.00 0.00 0.00 4.46
182 183 3.610911 CCTTCGCTTAATTTCAGGTCCT 58.389 45.455 0.00 0.00 0.00 3.85
183 184 3.623510 CCTTCGCTTAATTTCAGGTCCTC 59.376 47.826 0.00 0.00 0.00 3.71
184 185 4.508662 CTTCGCTTAATTTCAGGTCCTCT 58.491 43.478 0.00 0.00 0.00 3.69
185 186 4.124851 TCGCTTAATTTCAGGTCCTCTC 57.875 45.455 0.00 0.00 0.00 3.20
186 187 3.118738 TCGCTTAATTTCAGGTCCTCTCC 60.119 47.826 0.00 0.00 0.00 3.71
187 188 3.118592 CGCTTAATTTCAGGTCCTCTCCT 60.119 47.826 0.00 0.00 38.51 3.69
188 189 4.624125 CGCTTAATTTCAGGTCCTCTCCTT 60.624 45.833 0.00 0.00 35.37 3.36
189 190 4.878971 GCTTAATTTCAGGTCCTCTCCTTC 59.121 45.833 0.00 0.00 35.37 3.46
190 191 5.338789 GCTTAATTTCAGGTCCTCTCCTTCT 60.339 44.000 0.00 0.00 35.37 2.85
191 192 4.566426 AATTTCAGGTCCTCTCCTTCTG 57.434 45.455 0.00 0.00 35.37 3.02
192 193 3.260269 TTTCAGGTCCTCTCCTTCTGA 57.740 47.619 0.00 0.00 35.37 3.27
193 194 3.260269 TTCAGGTCCTCTCCTTCTGAA 57.740 47.619 0.00 0.00 40.70 3.02
194 195 2.813907 TCAGGTCCTCTCCTTCTGAAG 58.186 52.381 10.46 10.46 35.37 3.02
202 203 4.285851 CCTTCTGAAGGCACGTCC 57.714 61.111 22.55 0.00 42.78 4.79
203 204 1.371183 CCTTCTGAAGGCACGTCCA 59.629 57.895 22.55 0.00 42.78 4.02
204 205 0.036010 CCTTCTGAAGGCACGTCCAT 60.036 55.000 22.55 0.00 42.78 3.41
205 206 1.081892 CTTCTGAAGGCACGTCCATG 58.918 55.000 9.57 0.00 35.54 3.66
206 207 0.684535 TTCTGAAGGCACGTCCATGA 59.315 50.000 0.00 0.00 35.54 3.07
207 208 0.904649 TCTGAAGGCACGTCCATGAT 59.095 50.000 0.00 0.00 35.54 2.45
208 209 2.107366 TCTGAAGGCACGTCCATGATA 58.893 47.619 0.00 0.00 35.54 2.15
209 210 2.700371 TCTGAAGGCACGTCCATGATAT 59.300 45.455 0.00 0.00 35.54 1.63
210 211 3.134623 TCTGAAGGCACGTCCATGATATT 59.865 43.478 0.00 0.00 35.54 1.28
211 212 4.343814 TCTGAAGGCACGTCCATGATATTA 59.656 41.667 0.00 0.00 35.54 0.98
212 213 5.029807 TGAAGGCACGTCCATGATATTAA 57.970 39.130 0.00 0.00 35.54 1.40
213 214 4.814234 TGAAGGCACGTCCATGATATTAAC 59.186 41.667 0.00 0.00 35.54 2.01
214 215 4.689612 AGGCACGTCCATGATATTAACT 57.310 40.909 0.00 0.00 37.29 2.24
215 216 5.801531 AGGCACGTCCATGATATTAACTA 57.198 39.130 0.00 0.00 37.29 2.24
216 217 5.539048 AGGCACGTCCATGATATTAACTAC 58.461 41.667 0.00 0.00 37.29 2.73
217 218 5.069914 AGGCACGTCCATGATATTAACTACA 59.930 40.000 0.00 0.00 37.29 2.74
218 219 5.932303 GGCACGTCCATGATATTAACTACAT 59.068 40.000 0.00 0.00 34.01 2.29
219 220 6.090898 GGCACGTCCATGATATTAACTACATC 59.909 42.308 0.00 0.00 34.01 3.06
220 221 6.090898 GCACGTCCATGATATTAACTACATCC 59.909 42.308 0.00 0.00 0.00 3.51
221 222 7.378966 CACGTCCATGATATTAACTACATCCT 58.621 38.462 0.00 0.00 0.00 3.24
222 223 7.542477 CACGTCCATGATATTAACTACATCCTC 59.458 40.741 0.00 0.00 0.00 3.71
223 224 7.451877 ACGTCCATGATATTAACTACATCCTCT 59.548 37.037 0.00 0.00 0.00 3.69
224 225 8.957466 CGTCCATGATATTAACTACATCCTCTA 58.043 37.037 0.00 0.00 0.00 2.43
251 252 8.833231 ATTTATCTTCAACTGTTTTCTCTCGA 57.167 30.769 0.00 0.00 0.00 4.04
252 253 7.639162 TTATCTTCAACTGTTTTCTCTCGAC 57.361 36.000 0.00 0.00 0.00 4.20
253 254 5.006153 TCTTCAACTGTTTTCTCTCGACA 57.994 39.130 0.00 0.00 0.00 4.35
254 255 5.416083 TCTTCAACTGTTTTCTCTCGACAA 58.584 37.500 0.00 0.00 0.00 3.18
255 256 5.291128 TCTTCAACTGTTTTCTCTCGACAAC 59.709 40.000 0.00 0.00 31.94 3.32
256 257 3.550275 TCAACTGTTTTCTCTCGACAACG 59.450 43.478 0.00 0.00 33.56 4.10
257 258 3.431922 ACTGTTTTCTCTCGACAACGA 57.568 42.857 0.00 0.00 46.56 3.85
268 269 3.364889 TCGACAACGAATGACTCAACT 57.635 42.857 0.00 0.00 45.74 3.16
269 270 3.713288 TCGACAACGAATGACTCAACTT 58.287 40.909 0.00 0.00 45.74 2.66
270 271 3.734231 TCGACAACGAATGACTCAACTTC 59.266 43.478 0.00 0.00 45.74 3.01
271 272 3.120991 CGACAACGAATGACTCAACTTCC 60.121 47.826 0.00 0.00 42.66 3.46
272 273 2.800544 ACAACGAATGACTCAACTTCCG 59.199 45.455 0.00 0.00 0.00 4.30
273 274 2.800544 CAACGAATGACTCAACTTCCGT 59.199 45.455 0.00 0.00 0.00 4.69
274 275 3.928727 ACGAATGACTCAACTTCCGTA 57.071 42.857 0.00 0.00 0.00 4.02
275 276 3.572584 ACGAATGACTCAACTTCCGTAC 58.427 45.455 0.00 0.00 0.00 3.67
276 277 3.255149 ACGAATGACTCAACTTCCGTACT 59.745 43.478 0.00 0.00 0.00 2.73
277 278 3.608506 CGAATGACTCAACTTCCGTACTG 59.391 47.826 0.00 0.00 0.00 2.74
278 279 4.557205 GAATGACTCAACTTCCGTACTGT 58.443 43.478 0.00 0.00 0.00 3.55
279 280 3.637998 TGACTCAACTTCCGTACTGTC 57.362 47.619 0.00 0.00 0.00 3.51
280 281 3.220110 TGACTCAACTTCCGTACTGTCT 58.780 45.455 0.00 0.00 0.00 3.41
281 282 3.004419 TGACTCAACTTCCGTACTGTCTG 59.996 47.826 0.00 0.00 0.00 3.51
282 283 2.296471 ACTCAACTTCCGTACTGTCTGG 59.704 50.000 0.00 0.00 0.00 3.86
283 284 2.296471 CTCAACTTCCGTACTGTCTGGT 59.704 50.000 0.00 0.00 0.00 4.00
284 285 2.035449 TCAACTTCCGTACTGTCTGGTG 59.965 50.000 0.00 0.00 0.00 4.17
285 286 1.991121 ACTTCCGTACTGTCTGGTGA 58.009 50.000 0.00 0.00 0.00 4.02
286 287 1.612463 ACTTCCGTACTGTCTGGTGAC 59.388 52.381 0.00 0.00 43.20 3.67
287 288 0.963962 TTCCGTACTGTCTGGTGACC 59.036 55.000 0.00 0.00 42.28 4.02
288 289 0.178984 TCCGTACTGTCTGGTGACCA 60.179 55.000 3.40 3.40 42.28 4.02
289 290 0.677288 CCGTACTGTCTGGTGACCAA 59.323 55.000 5.53 0.00 42.28 3.67
290 291 1.275291 CCGTACTGTCTGGTGACCAAT 59.725 52.381 5.53 0.00 42.28 3.16
291 292 2.289444 CCGTACTGTCTGGTGACCAATT 60.289 50.000 5.53 0.00 42.28 2.32
292 293 3.399330 CGTACTGTCTGGTGACCAATTT 58.601 45.455 5.53 0.00 42.28 1.82
293 294 3.186409 CGTACTGTCTGGTGACCAATTTG 59.814 47.826 5.53 0.00 42.28 2.32
294 295 3.576078 ACTGTCTGGTGACCAATTTGA 57.424 42.857 5.53 0.00 42.28 2.69
295 296 3.897239 ACTGTCTGGTGACCAATTTGAA 58.103 40.909 5.53 0.00 42.28 2.69
296 297 4.473444 ACTGTCTGGTGACCAATTTGAAT 58.527 39.130 5.53 0.00 42.28 2.57
297 298 5.630121 ACTGTCTGGTGACCAATTTGAATA 58.370 37.500 5.53 0.00 42.28 1.75
298 299 6.248433 ACTGTCTGGTGACCAATTTGAATAT 58.752 36.000 5.53 0.00 42.28 1.28
299 300 6.375455 ACTGTCTGGTGACCAATTTGAATATC 59.625 38.462 5.53 0.00 42.28 1.63
300 301 5.353956 TGTCTGGTGACCAATTTGAATATCG 59.646 40.000 5.53 0.00 42.28 2.92
301 302 4.335315 TCTGGTGACCAATTTGAATATCGC 59.665 41.667 5.53 0.00 30.80 4.58
302 303 4.013050 TGGTGACCAATTTGAATATCGCA 58.987 39.130 0.00 0.00 0.00 5.10
303 304 4.644234 TGGTGACCAATTTGAATATCGCAT 59.356 37.500 0.00 0.00 0.00 4.73
304 305 5.825151 TGGTGACCAATTTGAATATCGCATA 59.175 36.000 0.00 0.00 0.00 3.14
305 306 6.017192 TGGTGACCAATTTGAATATCGCATAG 60.017 38.462 0.00 0.00 0.00 2.23
306 307 6.204688 GGTGACCAATTTGAATATCGCATAGA 59.795 38.462 0.00 0.00 0.00 1.98
307 308 7.094634 GGTGACCAATTTGAATATCGCATAGAT 60.095 37.037 0.00 0.00 43.19 1.98
308 309 7.747799 GTGACCAATTTGAATATCGCATAGATG 59.252 37.037 0.00 0.00 40.40 2.90
309 310 7.445096 TGACCAATTTGAATATCGCATAGATGT 59.555 33.333 0.00 0.00 40.40 3.06
310 311 8.846943 ACCAATTTGAATATCGCATAGATGTA 57.153 30.769 0.00 0.00 40.40 2.29
311 312 8.939929 ACCAATTTGAATATCGCATAGATGTAG 58.060 33.333 0.00 0.00 40.40 2.74
312 313 8.939929 CCAATTTGAATATCGCATAGATGTAGT 58.060 33.333 0.00 0.00 40.40 2.73
316 317 8.981724 TTGAATATCGCATAGATGTAGTAACC 57.018 34.615 0.00 0.00 40.40 2.85
317 318 7.544622 TGAATATCGCATAGATGTAGTAACCC 58.455 38.462 0.00 0.00 40.40 4.11
318 319 4.803098 ATCGCATAGATGTAGTAACCCC 57.197 45.455 0.00 0.00 38.36 4.95
319 320 3.840991 TCGCATAGATGTAGTAACCCCT 58.159 45.455 0.00 0.00 0.00 4.79
320 321 4.220724 TCGCATAGATGTAGTAACCCCTT 58.779 43.478 0.00 0.00 0.00 3.95
321 322 4.038763 TCGCATAGATGTAGTAACCCCTTG 59.961 45.833 0.00 0.00 0.00 3.61
322 323 4.038763 CGCATAGATGTAGTAACCCCTTGA 59.961 45.833 0.00 0.00 0.00 3.02
323 324 5.542779 GCATAGATGTAGTAACCCCTTGAG 58.457 45.833 0.00 0.00 0.00 3.02
324 325 5.304614 GCATAGATGTAGTAACCCCTTGAGA 59.695 44.000 0.00 0.00 0.00 3.27
325 326 6.183360 GCATAGATGTAGTAACCCCTTGAGAA 60.183 42.308 0.00 0.00 0.00 2.87
326 327 7.473511 GCATAGATGTAGTAACCCCTTGAGAAT 60.474 40.741 0.00 0.00 0.00 2.40
327 328 9.090103 CATAGATGTAGTAACCCCTTGAGAATA 57.910 37.037 0.00 0.00 0.00 1.75
328 329 7.604657 AGATGTAGTAACCCCTTGAGAATAG 57.395 40.000 0.00 0.00 0.00 1.73
329 330 7.363031 AGATGTAGTAACCCCTTGAGAATAGA 58.637 38.462 0.00 0.00 0.00 1.98
330 331 7.507616 AGATGTAGTAACCCCTTGAGAATAGAG 59.492 40.741 0.00 0.00 0.00 2.43
331 332 6.500336 TGTAGTAACCCCTTGAGAATAGAGT 58.500 40.000 0.00 0.00 0.00 3.24
332 333 6.958192 TGTAGTAACCCCTTGAGAATAGAGTT 59.042 38.462 0.00 0.00 0.00 3.01
333 334 6.954352 AGTAACCCCTTGAGAATAGAGTTT 57.046 37.500 0.00 0.00 0.00 2.66
334 335 6.712276 AGTAACCCCTTGAGAATAGAGTTTG 58.288 40.000 0.00 0.00 0.00 2.93
335 336 3.956744 ACCCCTTGAGAATAGAGTTTGC 58.043 45.455 0.00 0.00 0.00 3.68
336 337 3.330701 ACCCCTTGAGAATAGAGTTTGCA 59.669 43.478 0.00 0.00 0.00 4.08
337 338 4.202567 ACCCCTTGAGAATAGAGTTTGCAA 60.203 41.667 0.00 0.00 0.00 4.08
338 339 4.952335 CCCCTTGAGAATAGAGTTTGCAAT 59.048 41.667 0.00 0.00 0.00 3.56
339 340 5.067023 CCCCTTGAGAATAGAGTTTGCAATC 59.933 44.000 0.00 0.00 0.00 2.67
340 341 5.884792 CCCTTGAGAATAGAGTTTGCAATCT 59.115 40.000 9.79 9.79 0.00 2.40
341 342 6.376581 CCCTTGAGAATAGAGTTTGCAATCTT 59.623 38.462 11.24 4.88 0.00 2.40
342 343 7.094032 CCCTTGAGAATAGAGTTTGCAATCTTT 60.094 37.037 11.24 8.42 0.00 2.52
343 344 8.302438 CCTTGAGAATAGAGTTTGCAATCTTTT 58.698 33.333 11.24 8.20 0.00 2.27
344 345 9.339492 CTTGAGAATAGAGTTTGCAATCTTTTC 57.661 33.333 18.17 18.17 35.19 2.29
345 346 7.820648 TGAGAATAGAGTTTGCAATCTTTTCC 58.179 34.615 20.43 15.31 35.41 3.13
346 347 7.094205 TGAGAATAGAGTTTGCAATCTTTTCCC 60.094 37.037 20.43 14.20 35.41 3.97
347 348 6.950619 AGAATAGAGTTTGCAATCTTTTCCCT 59.049 34.615 20.43 12.33 35.41 4.20
348 349 6.765915 ATAGAGTTTGCAATCTTTTCCCTC 57.234 37.500 11.24 2.64 0.00 4.30
349 350 4.734266 AGAGTTTGCAATCTTTTCCCTCT 58.266 39.130 11.24 4.59 0.00 3.69
350 351 5.880901 AGAGTTTGCAATCTTTTCCCTCTA 58.119 37.500 11.24 0.00 0.00 2.43
351 352 5.942826 AGAGTTTGCAATCTTTTCCCTCTAG 59.057 40.000 11.24 0.00 0.00 2.43
352 353 4.460731 AGTTTGCAATCTTTTCCCTCTAGC 59.539 41.667 0.00 0.00 0.00 3.42
353 354 3.004752 TGCAATCTTTTCCCTCTAGCC 57.995 47.619 0.00 0.00 0.00 3.93
354 355 2.308570 TGCAATCTTTTCCCTCTAGCCA 59.691 45.455 0.00 0.00 0.00 4.75
355 356 3.053395 TGCAATCTTTTCCCTCTAGCCAT 60.053 43.478 0.00 0.00 0.00 4.40
356 357 3.567585 GCAATCTTTTCCCTCTAGCCATC 59.432 47.826 0.00 0.00 0.00 3.51
357 358 4.140536 CAATCTTTTCCCTCTAGCCATCC 58.859 47.826 0.00 0.00 0.00 3.51
358 359 2.845659 TCTTTTCCCTCTAGCCATCCA 58.154 47.619 0.00 0.00 0.00 3.41
359 360 3.189606 TCTTTTCCCTCTAGCCATCCAA 58.810 45.455 0.00 0.00 0.00 3.53
360 361 3.200825 TCTTTTCCCTCTAGCCATCCAAG 59.799 47.826 0.00 0.00 0.00 3.61
361 362 2.568546 TTCCCTCTAGCCATCCAAGA 57.431 50.000 0.00 0.00 0.00 3.02
362 363 1.794714 TCCCTCTAGCCATCCAAGAC 58.205 55.000 0.00 0.00 0.00 3.01
363 364 1.292242 TCCCTCTAGCCATCCAAGACT 59.708 52.381 0.00 0.00 0.00 3.24
364 365 2.122768 CCCTCTAGCCATCCAAGACTT 58.877 52.381 0.00 0.00 0.00 3.01
365 366 2.507471 CCCTCTAGCCATCCAAGACTTT 59.493 50.000 0.00 0.00 0.00 2.66
366 367 3.432890 CCCTCTAGCCATCCAAGACTTTC 60.433 52.174 0.00 0.00 0.00 2.62
367 368 3.432890 CCTCTAGCCATCCAAGACTTTCC 60.433 52.174 0.00 0.00 0.00 3.13
368 369 3.181329 TCTAGCCATCCAAGACTTTCCA 58.819 45.455 0.00 0.00 0.00 3.53
369 370 2.978156 AGCCATCCAAGACTTTCCAA 57.022 45.000 0.00 0.00 0.00 3.53
370 371 3.243359 AGCCATCCAAGACTTTCCAAA 57.757 42.857 0.00 0.00 0.00 3.28
371 372 3.782992 AGCCATCCAAGACTTTCCAAAT 58.217 40.909 0.00 0.00 0.00 2.32
372 373 4.934356 AGCCATCCAAGACTTTCCAAATA 58.066 39.130 0.00 0.00 0.00 1.40
373 374 5.332743 AGCCATCCAAGACTTTCCAAATAA 58.667 37.500 0.00 0.00 0.00 1.40
374 375 5.420104 AGCCATCCAAGACTTTCCAAATAAG 59.580 40.000 0.00 0.00 0.00 1.73
375 376 5.394553 GCCATCCAAGACTTTCCAAATAAGG 60.395 44.000 0.00 0.00 0.00 2.69
376 377 5.716703 CCATCCAAGACTTTCCAAATAAGGT 59.283 40.000 0.00 0.00 0.00 3.50
377 378 6.127619 CCATCCAAGACTTTCCAAATAAGGTC 60.128 42.308 0.00 0.00 36.12 3.85
378 379 5.947663 TCCAAGACTTTCCAAATAAGGTCA 58.052 37.500 0.00 0.00 37.79 4.02
379 380 6.552008 TCCAAGACTTTCCAAATAAGGTCAT 58.448 36.000 0.00 0.00 37.79 3.06
380 381 7.695055 TCCAAGACTTTCCAAATAAGGTCATA 58.305 34.615 0.00 0.00 37.79 2.15
381 382 8.167392 TCCAAGACTTTCCAAATAAGGTCATAA 58.833 33.333 0.00 0.00 37.79 1.90
382 383 8.802267 CCAAGACTTTCCAAATAAGGTCATAAA 58.198 33.333 0.00 0.00 37.79 1.40
386 387 9.952188 GACTTTCCAAATAAGGTCATAAATAGC 57.048 33.333 0.00 0.00 35.97 2.97
387 388 9.474313 ACTTTCCAAATAAGGTCATAAATAGCA 57.526 29.630 0.00 0.00 0.00 3.49
388 389 9.736023 CTTTCCAAATAAGGTCATAAATAGCAC 57.264 33.333 0.00 0.00 0.00 4.40
389 390 7.817418 TCCAAATAAGGTCATAAATAGCACC 57.183 36.000 0.00 0.00 0.00 5.01
390 391 7.582719 TCCAAATAAGGTCATAAATAGCACCT 58.417 34.615 0.00 0.00 41.27 4.00
392 393 8.137437 CCAAATAAGGTCATAAATAGCACCTTG 58.863 37.037 11.65 0.00 46.61 3.61
393 394 8.902806 CAAATAAGGTCATAAATAGCACCTTGA 58.097 33.333 11.65 0.00 46.61 3.02
394 395 9.646522 AAATAAGGTCATAAATAGCACCTTGAT 57.353 29.630 11.65 0.00 46.61 2.57
396 397 9.950496 ATAAGGTCATAAATAGCACCTTGATAG 57.050 33.333 11.65 0.00 46.61 2.08
397 398 6.234177 AGGTCATAAATAGCACCTTGATAGC 58.766 40.000 0.00 0.00 35.61 2.97
398 399 5.997746 GGTCATAAATAGCACCTTGATAGCA 59.002 40.000 0.00 0.00 0.00 3.49
399 400 6.148480 GGTCATAAATAGCACCTTGATAGCAG 59.852 42.308 0.00 0.00 0.00 4.24
400 401 6.931281 GTCATAAATAGCACCTTGATAGCAGA 59.069 38.462 0.00 0.00 0.00 4.26
401 402 6.931281 TCATAAATAGCACCTTGATAGCAGAC 59.069 38.462 0.00 0.00 0.00 3.51
402 403 3.760580 ATAGCACCTTGATAGCAGACC 57.239 47.619 0.00 0.00 0.00 3.85
403 404 1.279496 AGCACCTTGATAGCAGACCA 58.721 50.000 0.00 0.00 0.00 4.02
404 405 1.842562 AGCACCTTGATAGCAGACCAT 59.157 47.619 0.00 0.00 0.00 3.55
405 406 2.240667 AGCACCTTGATAGCAGACCATT 59.759 45.455 0.00 0.00 0.00 3.16
406 407 2.357009 GCACCTTGATAGCAGACCATTG 59.643 50.000 0.00 0.00 0.00 2.82
407 408 3.614092 CACCTTGATAGCAGACCATTGT 58.386 45.455 0.00 0.00 0.00 2.71
408 409 4.012374 CACCTTGATAGCAGACCATTGTT 58.988 43.478 0.00 0.00 0.00 2.83
409 410 4.460382 CACCTTGATAGCAGACCATTGTTT 59.540 41.667 0.00 0.00 0.00 2.83
410 411 5.047802 CACCTTGATAGCAGACCATTGTTTT 60.048 40.000 0.00 0.00 0.00 2.43
411 412 5.183904 ACCTTGATAGCAGACCATTGTTTTC 59.816 40.000 0.00 0.00 0.00 2.29
412 413 5.416952 CCTTGATAGCAGACCATTGTTTTCT 59.583 40.000 0.00 0.00 0.00 2.52
413 414 5.885230 TGATAGCAGACCATTGTTTTCTG 57.115 39.130 0.00 0.00 39.89 3.02
414 415 5.316167 TGATAGCAGACCATTGTTTTCTGT 58.684 37.500 0.00 0.00 39.23 3.41
415 416 6.472016 TGATAGCAGACCATTGTTTTCTGTA 58.528 36.000 0.00 0.00 39.23 2.74
416 417 6.371548 TGATAGCAGACCATTGTTTTCTGTAC 59.628 38.462 0.00 0.00 39.23 2.90
417 418 3.498397 AGCAGACCATTGTTTTCTGTACG 59.502 43.478 0.00 0.00 39.23 3.67
418 419 3.250040 GCAGACCATTGTTTTCTGTACGT 59.750 43.478 0.00 0.00 39.23 3.57
419 420 4.449743 GCAGACCATTGTTTTCTGTACGTA 59.550 41.667 0.00 0.00 39.23 3.57
420 421 5.049954 GCAGACCATTGTTTTCTGTACGTAA 60.050 40.000 0.00 0.00 39.23 3.18
421 422 6.512091 GCAGACCATTGTTTTCTGTACGTAAA 60.512 38.462 0.00 0.00 39.23 2.01
422 423 7.581476 CAGACCATTGTTTTCTGTACGTAAAT 58.419 34.615 0.00 0.00 33.44 1.40
423 424 7.744715 CAGACCATTGTTTTCTGTACGTAAATC 59.255 37.037 0.00 0.00 33.44 2.17
424 425 7.660208 AGACCATTGTTTTCTGTACGTAAATCT 59.340 33.333 0.00 0.00 0.00 2.40
425 426 8.836268 ACCATTGTTTTCTGTACGTAAATCTA 57.164 30.769 0.00 0.00 0.00 1.98
426 427 9.275398 ACCATTGTTTTCTGTACGTAAATCTAA 57.725 29.630 0.00 0.00 0.00 2.10
476 477 6.861572 GCAAACATAAACTCCTCTAAAACCAC 59.138 38.462 0.00 0.00 0.00 4.16
480 481 6.710744 ACATAAACTCCTCTAAAACCACACAG 59.289 38.462 0.00 0.00 0.00 3.66
487 488 4.819630 CCTCTAAAACCACACAGCAAACTA 59.180 41.667 0.00 0.00 0.00 2.24
496 497 4.754618 CCACACAGCAAACTATACACAAGA 59.245 41.667 0.00 0.00 0.00 3.02
506 507 8.279103 GCAAACTATACACAAGATAATCAGAGC 58.721 37.037 0.00 0.00 0.00 4.09
511 512 3.181471 ACACAAGATAATCAGAGCCCTCG 60.181 47.826 0.00 0.00 34.09 4.63
519 520 1.500474 TCAGAGCCCTCGGATCAAAT 58.500 50.000 0.00 0.00 41.08 2.32
523 524 2.158842 AGAGCCCTCGGATCAAATCAAG 60.159 50.000 0.00 0.00 41.08 3.02
553 554 8.435931 ACATATCCTACTGTCCATATTAAGCA 57.564 34.615 0.00 0.00 0.00 3.91
578 579 2.287668 GGTCTATCGTCCAGATCAACGG 60.288 54.545 13.17 3.08 40.66 4.44
581 582 0.103208 ATCGTCCAGATCAACGGCTC 59.897 55.000 13.17 0.42 39.31 4.70
583 584 1.078759 CGTCCAGATCAACGGCTCAC 61.079 60.000 0.00 0.00 35.32 3.51
630 1211 0.176680 CGGTCTGCCAATAGTCTGCT 59.823 55.000 0.00 0.00 34.09 4.24
636 1217 0.466372 GCCAATAGTCTGCTTCCCCC 60.466 60.000 0.00 0.00 0.00 5.40
663 1244 1.078497 CAGCCTCGCCCATAACACA 60.078 57.895 0.00 0.00 0.00 3.72
665 1246 0.464373 AGCCTCGCCCATAACACATG 60.464 55.000 0.00 0.00 0.00 3.21
666 1247 0.463654 GCCTCGCCCATAACACATGA 60.464 55.000 0.00 0.00 0.00 3.07
713 1297 1.992277 ACCATCTTCGCTGCCTCCT 60.992 57.895 0.00 0.00 0.00 3.69
714 1298 1.227497 CCATCTTCGCTGCCTCCTC 60.227 63.158 0.00 0.00 0.00 3.71
715 1299 1.591059 CATCTTCGCTGCCTCCTCG 60.591 63.158 0.00 0.00 0.00 4.63
716 1300 1.754621 ATCTTCGCTGCCTCCTCGA 60.755 57.895 0.00 0.00 0.00 4.04
717 1301 1.733402 ATCTTCGCTGCCTCCTCGAG 61.733 60.000 5.13 5.13 33.56 4.04
718 1302 2.361230 TTCGCTGCCTCCTCGAGA 60.361 61.111 15.71 0.00 33.56 4.04
719 1303 1.733402 CTTCGCTGCCTCCTCGAGAT 61.733 60.000 15.71 0.00 33.56 2.75
720 1304 2.009424 TTCGCTGCCTCCTCGAGATG 62.009 60.000 15.71 5.81 33.56 2.90
721 1305 2.484928 CGCTGCCTCCTCGAGATGA 61.485 63.158 15.71 2.20 0.00 2.92
731 1315 4.240103 CGAGATGATGCCGCCCCA 62.240 66.667 0.00 0.00 0.00 4.96
732 1316 2.433446 GAGATGATGCCGCCCCAT 59.567 61.111 0.00 0.00 0.00 4.00
733 1317 1.673665 GAGATGATGCCGCCCCATC 60.674 63.158 11.88 11.88 41.51 3.51
734 1318 2.121992 GAGATGATGCCGCCCCATCT 62.122 60.000 18.81 18.81 46.71 2.90
753 1337 4.419921 CCCCCACCCCGTTGCTAC 62.420 72.222 0.00 0.00 0.00 3.58
779 1363 1.437986 CCAATCGACCCCGTCTCTC 59.562 63.158 0.00 0.00 37.05 3.20
780 1364 1.038130 CCAATCGACCCCGTCTCTCT 61.038 60.000 0.00 0.00 37.05 3.10
783 1367 0.256464 ATCGACCCCGTCTCTCTTCT 59.744 55.000 0.00 0.00 37.05 2.85
796 1380 0.036952 CTCTTCTGAGAAAGCCGCCA 60.037 55.000 0.00 0.00 42.73 5.69
799 1383 3.121030 CTGAGAAAGCCGCCACCG 61.121 66.667 0.00 0.00 0.00 4.94
827 1411 0.464554 CCCGCCCTCAAATTCCTCTC 60.465 60.000 0.00 0.00 0.00 3.20
843 1427 1.338337 CTCTCCACTCCATATCGCGTT 59.662 52.381 5.77 0.00 0.00 4.84
848 1432 0.759436 ACTCCATATCGCGTTCCCCT 60.759 55.000 5.77 0.00 0.00 4.79
883 1468 0.915364 ATCCAGAGGAGGAGTTTGCC 59.085 55.000 0.00 0.00 41.90 4.52
930 1515 5.887598 CCCATGTGAGAGAGATAGATAGGAG 59.112 48.000 0.00 0.00 0.00 3.69
932 1517 6.825213 CCATGTGAGAGAGATAGATAGGAGAG 59.175 46.154 0.00 0.00 0.00 3.20
977 1595 2.910360 CGGGATCTGCATGGTGGA 59.090 61.111 0.00 0.00 0.00 4.02
978 1596 1.453235 CGGGATCTGCATGGTGGAT 59.547 57.895 0.00 0.00 0.00 3.41
979 1597 0.179009 CGGGATCTGCATGGTGGATT 60.179 55.000 0.00 0.00 0.00 3.01
988 1614 2.299582 TGCATGGTGGATTTGTTCAAGG 59.700 45.455 0.00 0.00 0.00 3.61
993 1619 1.546029 GTGGATTTGTTCAAGGGGAGC 59.454 52.381 0.00 0.00 0.00 4.70
1011 1637 1.741401 CGACGCCATGAAGCTGGAA 60.741 57.895 0.00 0.00 38.69 3.53
1013 1639 1.372087 GACGCCATGAAGCTGGAAGG 61.372 60.000 0.00 0.00 38.69 3.46
1019 1645 0.622665 ATGAAGCTGGAAGGGTCCTG 59.377 55.000 0.00 0.00 45.22 3.86
1041 1667 2.415426 GGTGAGCTCGCTCTAGCC 59.585 66.667 25.54 13.91 43.86 3.93
1045 1671 1.257750 TGAGCTCGCTCTAGCCCAAA 61.258 55.000 18.63 0.00 43.86 3.28
1046 1672 0.808060 GAGCTCGCTCTAGCCCAAAC 60.808 60.000 11.49 0.00 43.86 2.93
1100 1726 2.409870 CCAGGATTTGCGAGGTGCC 61.410 63.158 0.00 0.00 45.60 5.01
1199 1825 3.406361 GAGCACGCGTGGACACAG 61.406 66.667 37.47 13.72 0.00 3.66
1253 1879 4.437587 GGATGCCAGCACTGCCCT 62.438 66.667 0.00 0.00 0.00 5.19
1281 1913 2.094675 AGCAGCTTCACAACAACAAGT 58.905 42.857 0.00 0.00 0.00 3.16
1300 1932 5.104900 ACAAGTGAATTAGGGATTAGCGACT 60.105 40.000 0.00 0.00 0.00 4.18
1301 1933 4.950050 AGTGAATTAGGGATTAGCGACTG 58.050 43.478 0.00 0.00 0.00 3.51
1302 1934 4.649674 AGTGAATTAGGGATTAGCGACTGA 59.350 41.667 0.00 0.00 0.00 3.41
1305 2145 5.362717 TGAATTAGGGATTAGCGACTGAAGA 59.637 40.000 0.00 0.00 0.00 2.87
1309 2149 5.104259 AGGGATTAGCGACTGAAGATTTT 57.896 39.130 0.00 0.00 0.00 1.82
1362 2202 9.173021 CATGATTAGAACACAAGTTTGGGTATA 57.827 33.333 0.00 0.00 45.74 1.47
1364 2204 9.005777 TGATTAGAACACAAGTTTGGGTATAAC 57.994 33.333 0.00 1.12 45.74 1.89
1374 2214 9.747898 ACAAGTTTGGGTATAACTTTGATGATA 57.252 29.630 0.00 0.00 42.32 2.15
1376 2216 9.747898 AAGTTTGGGTATAACTTTGATGATACA 57.252 29.630 0.00 0.00 41.69 2.29
1401 2241 8.917088 CACATTAGTAAATTTGGGGATCATTCT 58.083 33.333 0.00 0.00 0.00 2.40
1402 2242 8.917088 ACATTAGTAAATTTGGGGATCATTCTG 58.083 33.333 0.00 0.00 0.00 3.02
1455 2295 5.891551 AGGACCAGTAACACATGTTTCTTTT 59.108 36.000 1.98 0.00 39.31 2.27
1460 2300 5.459762 CAGTAACACATGTTTCTTTTGCCTG 59.540 40.000 1.98 0.00 39.31 4.85
1463 2303 3.701040 ACACATGTTTCTTTTGCCTGAGT 59.299 39.130 0.00 0.00 0.00 3.41
1530 2370 9.471084 TGCATTGCATATCATTTATTTCTGAAG 57.529 29.630 7.38 0.00 31.71 3.02
1577 2417 7.228706 CAGAAATAAGGGTTGTTGTGACTTACT 59.771 37.037 0.00 0.00 0.00 2.24
1588 2428 8.690840 GTTGTTGTGACTTACTGAAAAATATGC 58.309 33.333 0.00 0.00 0.00 3.14
1589 2429 7.367285 TGTTGTGACTTACTGAAAAATATGCC 58.633 34.615 0.00 0.00 0.00 4.40
1597 2437 4.218312 ACTGAAAAATATGCCATCTCCCC 58.782 43.478 0.00 0.00 0.00 4.81
1600 2440 3.979501 AAAATATGCCATCTCCCCTGT 57.020 42.857 0.00 0.00 0.00 4.00
1618 2458 4.338682 CCCTGTATTTCTACACTAGCGACT 59.661 45.833 0.00 0.00 34.20 4.18
1630 2470 8.900781 TCTACACTAGCGACTTGTATATTTTCT 58.099 33.333 0.00 0.00 0.00 2.52
1654 2494 5.546621 TTGTACTCTACTCAAGTTTGGCT 57.453 39.130 0.00 0.00 0.00 4.75
1655 2495 5.135508 TGTACTCTACTCAAGTTTGGCTC 57.864 43.478 0.00 0.00 0.00 4.70
1656 2496 3.686916 ACTCTACTCAAGTTTGGCTCC 57.313 47.619 0.00 0.00 0.00 4.70
1658 2498 3.007398 ACTCTACTCAAGTTTGGCTCCTG 59.993 47.826 0.00 0.00 0.00 3.86
1659 2499 2.079925 CTACTCAAGTTTGGCTCCTGC 58.920 52.381 0.00 0.00 38.76 4.85
1727 2569 3.025262 GCTACTTGGTACCAGCTCTACT 58.975 50.000 15.65 0.00 0.00 2.57
1733 2575 4.002906 TGGTACCAGCTCTACTTGTTTG 57.997 45.455 11.60 0.00 0.00 2.93
1939 2804 6.054035 GCATAAGCAAGAAAACCTAGCTAG 57.946 41.667 14.20 14.20 41.58 3.42
2051 2916 8.883731 AGTGACACTTTATAGATGTACATTTGC 58.116 33.333 10.30 0.00 0.00 3.68
2143 3008 8.713737 TGTCAATAGAATTGAATCACAGAGAG 57.286 34.615 4.00 0.00 0.00 3.20
2292 3161 1.632589 GGCCCAGTTTGGAACTTGAT 58.367 50.000 0.00 0.00 40.96 2.57
2299 3168 5.156355 CCAGTTTGGAACTTGATGAATTCG 58.844 41.667 0.04 0.00 40.96 3.34
2300 3169 5.278463 CCAGTTTGGAACTTGATGAATTCGT 60.278 40.000 0.00 0.00 40.96 3.85
2301 3170 6.072728 CCAGTTTGGAACTTGATGAATTCGTA 60.073 38.462 0.00 0.00 40.96 3.43
2302 3171 7.359595 CAGTTTGGAACTTGATGAATTCGTAA 58.640 34.615 0.00 0.00 40.46 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
7 8 4.963318 ACAGAGGAACACTTCATGAGAA 57.037 40.909 0.00 0.00 0.00 2.87
8 9 7.904558 ATATACAGAGGAACACTTCATGAGA 57.095 36.000 0.00 0.00 0.00 3.27
9 10 8.420222 AGAATATACAGAGGAACACTTCATGAG 58.580 37.037 0.00 0.00 0.00 2.90
10 11 8.311395 AGAATATACAGAGGAACACTTCATGA 57.689 34.615 0.00 0.00 0.00 3.07
11 12 8.954950 AAGAATATACAGAGGAACACTTCATG 57.045 34.615 0.00 0.00 0.00 3.07
33 34 8.825745 GGTGCAACAAATCAAAGAAAATAAAGA 58.174 29.630 0.00 0.00 39.98 2.52
34 35 8.610896 TGGTGCAACAAATCAAAGAAAATAAAG 58.389 29.630 0.00 0.00 39.98 1.85
35 36 8.498054 TGGTGCAACAAATCAAAGAAAATAAA 57.502 26.923 0.00 0.00 39.98 1.40
36 37 7.226325 CCTGGTGCAACAAATCAAAGAAAATAA 59.774 33.333 5.64 0.00 39.98 1.40
37 38 6.705381 CCTGGTGCAACAAATCAAAGAAAATA 59.295 34.615 5.64 0.00 39.98 1.40
38 39 5.528320 CCTGGTGCAACAAATCAAAGAAAAT 59.472 36.000 5.64 0.00 39.98 1.82
39 40 4.874966 CCTGGTGCAACAAATCAAAGAAAA 59.125 37.500 5.64 0.00 39.98 2.29
40 41 4.161189 TCCTGGTGCAACAAATCAAAGAAA 59.839 37.500 5.64 0.00 39.98 2.52
41 42 3.703556 TCCTGGTGCAACAAATCAAAGAA 59.296 39.130 5.64 0.00 39.98 2.52
42 43 3.068024 GTCCTGGTGCAACAAATCAAAGA 59.932 43.478 5.64 0.00 39.98 2.52
43 44 3.068590 AGTCCTGGTGCAACAAATCAAAG 59.931 43.478 5.64 0.00 39.98 2.77
44 45 3.030291 AGTCCTGGTGCAACAAATCAAA 58.970 40.909 5.64 0.00 39.98 2.69
45 46 2.665165 AGTCCTGGTGCAACAAATCAA 58.335 42.857 5.64 0.00 39.98 2.57
46 47 2.363306 AGTCCTGGTGCAACAAATCA 57.637 45.000 5.64 0.00 39.98 2.57
47 48 3.733443 AAAGTCCTGGTGCAACAAATC 57.267 42.857 5.64 0.00 39.98 2.17
48 49 4.486125 AAAAAGTCCTGGTGCAACAAAT 57.514 36.364 5.64 0.00 39.98 2.32
49 50 3.971245 AAAAAGTCCTGGTGCAACAAA 57.029 38.095 5.64 0.00 39.98 2.83
50 51 4.464597 ACTTAAAAAGTCCTGGTGCAACAA 59.535 37.500 5.64 0.00 37.02 2.83
51 52 4.020543 ACTTAAAAAGTCCTGGTGCAACA 58.979 39.130 3.40 3.40 37.02 3.33
52 53 4.649088 ACTTAAAAAGTCCTGGTGCAAC 57.351 40.909 0.00 0.00 37.02 4.17
53 54 6.969993 ATTACTTAAAAAGTCCTGGTGCAA 57.030 33.333 0.00 0.00 41.77 4.08
54 55 6.737346 GCAATTACTTAAAAAGTCCTGGTGCA 60.737 38.462 0.00 0.00 41.77 4.57
55 56 5.633601 GCAATTACTTAAAAAGTCCTGGTGC 59.366 40.000 0.00 0.00 41.77 5.01
56 57 6.981722 AGCAATTACTTAAAAAGTCCTGGTG 58.018 36.000 0.00 0.00 41.77 4.17
57 58 6.072673 CGAGCAATTACTTAAAAAGTCCTGGT 60.073 38.462 0.00 0.00 41.77 4.00
58 59 6.314784 CGAGCAATTACTTAAAAAGTCCTGG 58.685 40.000 0.00 0.00 41.77 4.45
59 60 5.795441 GCGAGCAATTACTTAAAAAGTCCTG 59.205 40.000 0.00 0.00 41.77 3.86
60 61 5.705905 AGCGAGCAATTACTTAAAAAGTCCT 59.294 36.000 0.00 0.00 41.77 3.85
61 62 5.939457 AGCGAGCAATTACTTAAAAAGTCC 58.061 37.500 0.00 0.00 41.77 3.85
62 63 6.832804 AGAGCGAGCAATTACTTAAAAAGTC 58.167 36.000 0.00 0.00 41.77 3.01
63 64 6.651225 AGAGAGCGAGCAATTACTTAAAAAGT 59.349 34.615 0.00 0.00 45.40 2.66
64 65 7.066374 AGAGAGCGAGCAATTACTTAAAAAG 57.934 36.000 0.00 0.00 0.00 2.27
65 66 7.298122 CAAGAGAGCGAGCAATTACTTAAAAA 58.702 34.615 0.00 0.00 0.00 1.94
66 67 6.128282 CCAAGAGAGCGAGCAATTACTTAAAA 60.128 38.462 0.00 0.00 0.00 1.52
67 68 5.351465 CCAAGAGAGCGAGCAATTACTTAAA 59.649 40.000 0.00 0.00 0.00 1.52
68 69 4.870426 CCAAGAGAGCGAGCAATTACTTAA 59.130 41.667 0.00 0.00 0.00 1.85
69 70 4.433615 CCAAGAGAGCGAGCAATTACTTA 58.566 43.478 0.00 0.00 0.00 2.24
70 71 3.265791 CCAAGAGAGCGAGCAATTACTT 58.734 45.455 0.00 0.00 0.00 2.24
71 72 2.419297 CCCAAGAGAGCGAGCAATTACT 60.419 50.000 0.00 0.00 0.00 2.24
72 73 1.936547 CCCAAGAGAGCGAGCAATTAC 59.063 52.381 0.00 0.00 0.00 1.89
73 74 1.555075 ACCCAAGAGAGCGAGCAATTA 59.445 47.619 0.00 0.00 0.00 1.40
74 75 0.326264 ACCCAAGAGAGCGAGCAATT 59.674 50.000 0.00 0.00 0.00 2.32
75 76 1.195115 TACCCAAGAGAGCGAGCAAT 58.805 50.000 0.00 0.00 0.00 3.56
76 77 1.195115 ATACCCAAGAGAGCGAGCAA 58.805 50.000 0.00 0.00 0.00 3.91
77 78 1.195115 AATACCCAAGAGAGCGAGCA 58.805 50.000 0.00 0.00 0.00 4.26
78 79 1.936547 CAAATACCCAAGAGAGCGAGC 59.063 52.381 0.00 0.00 0.00 5.03
79 80 3.252974 ACAAATACCCAAGAGAGCGAG 57.747 47.619 0.00 0.00 0.00 5.03
80 81 4.693283 CATACAAATACCCAAGAGAGCGA 58.307 43.478 0.00 0.00 0.00 4.93
81 82 3.248602 GCATACAAATACCCAAGAGAGCG 59.751 47.826 0.00 0.00 0.00 5.03
82 83 3.565902 GGCATACAAATACCCAAGAGAGC 59.434 47.826 0.00 0.00 0.00 4.09
83 84 3.809832 CGGCATACAAATACCCAAGAGAG 59.190 47.826 0.00 0.00 0.00 3.20
84 85 3.804036 CGGCATACAAATACCCAAGAGA 58.196 45.455 0.00 0.00 0.00 3.10
85 86 2.290641 GCGGCATACAAATACCCAAGAG 59.709 50.000 0.00 0.00 0.00 2.85
86 87 2.294074 GCGGCATACAAATACCCAAGA 58.706 47.619 0.00 0.00 0.00 3.02
87 88 1.002900 CGCGGCATACAAATACCCAAG 60.003 52.381 0.00 0.00 0.00 3.61
88 89 1.018148 CGCGGCATACAAATACCCAA 58.982 50.000 0.00 0.00 0.00 4.12
89 90 0.178301 TCGCGGCATACAAATACCCA 59.822 50.000 6.13 0.00 0.00 4.51
90 91 1.003223 GTTCGCGGCATACAAATACCC 60.003 52.381 6.13 0.00 0.00 3.69
91 92 1.666700 TGTTCGCGGCATACAAATACC 59.333 47.619 6.13 0.00 0.00 2.73
92 93 2.350498 ACTGTTCGCGGCATACAAATAC 59.650 45.455 6.13 0.00 0.00 1.89
93 94 2.623535 ACTGTTCGCGGCATACAAATA 58.376 42.857 6.13 0.00 0.00 1.40
94 95 1.448985 ACTGTTCGCGGCATACAAAT 58.551 45.000 6.13 0.00 0.00 2.32
95 96 1.727880 GTACTGTTCGCGGCATACAAA 59.272 47.619 6.13 0.00 0.00 2.83
96 97 1.352114 GTACTGTTCGCGGCATACAA 58.648 50.000 6.13 0.00 0.00 2.41
97 98 0.799152 CGTACTGTTCGCGGCATACA 60.799 55.000 6.13 5.20 0.00 2.29
98 99 1.477030 CCGTACTGTTCGCGGCATAC 61.477 60.000 6.13 9.40 38.99 2.39
99 100 1.226745 CCGTACTGTTCGCGGCATA 60.227 57.895 6.13 0.00 38.99 3.14
100 101 2.508439 CCGTACTGTTCGCGGCAT 60.508 61.111 6.13 0.00 38.99 4.40
104 105 1.554042 AACAAGCCGTACTGTTCGCG 61.554 55.000 0.00 0.00 0.00 5.87
105 106 0.584876 AAACAAGCCGTACTGTTCGC 59.415 50.000 0.98 0.00 0.00 4.70
106 107 2.096909 CAGAAACAAGCCGTACTGTTCG 60.097 50.000 0.00 0.00 31.59 3.95
107 108 2.870411 ACAGAAACAAGCCGTACTGTTC 59.130 45.455 0.00 0.00 40.24 3.18
108 109 2.914059 ACAGAAACAAGCCGTACTGTT 58.086 42.857 0.00 0.00 40.24 3.16
109 110 2.614829 ACAGAAACAAGCCGTACTGT 57.385 45.000 0.00 0.00 39.17 3.55
110 111 3.963383 AAACAGAAACAAGCCGTACTG 57.037 42.857 0.00 0.00 37.82 2.74
111 112 4.196971 AGAAAACAGAAACAAGCCGTACT 58.803 39.130 0.00 0.00 0.00 2.73
112 113 4.547406 AGAAAACAGAAACAAGCCGTAC 57.453 40.909 0.00 0.00 0.00 3.67
113 114 5.449451 GGAAAGAAAACAGAAACAAGCCGTA 60.449 40.000 0.00 0.00 0.00 4.02
114 115 4.421058 GAAAGAAAACAGAAACAAGCCGT 58.579 39.130 0.00 0.00 0.00 5.68
115 116 3.796717 GGAAAGAAAACAGAAACAAGCCG 59.203 43.478 0.00 0.00 0.00 5.52
116 117 3.796717 CGGAAAGAAAACAGAAACAAGCC 59.203 43.478 0.00 0.00 0.00 4.35
117 118 4.499399 GTCGGAAAGAAAACAGAAACAAGC 59.501 41.667 0.00 0.00 0.00 4.01
118 119 5.880341 AGTCGGAAAGAAAACAGAAACAAG 58.120 37.500 0.00 0.00 0.00 3.16
119 120 5.890424 AGTCGGAAAGAAAACAGAAACAA 57.110 34.783 0.00 0.00 0.00 2.83
120 121 5.413213 TCAAGTCGGAAAGAAAACAGAAACA 59.587 36.000 0.00 0.00 0.00 2.83
121 122 5.875930 TCAAGTCGGAAAGAAAACAGAAAC 58.124 37.500 0.00 0.00 0.00 2.78
122 123 6.511121 CGATCAAGTCGGAAAGAAAACAGAAA 60.511 38.462 0.00 0.00 46.47 2.52
123 124 5.050363 CGATCAAGTCGGAAAGAAAACAGAA 60.050 40.000 0.00 0.00 46.47 3.02
124 125 4.447724 CGATCAAGTCGGAAAGAAAACAGA 59.552 41.667 0.00 0.00 46.47 3.41
125 126 4.702392 CGATCAAGTCGGAAAGAAAACAG 58.298 43.478 0.00 0.00 46.47 3.16
126 127 4.725556 CGATCAAGTCGGAAAGAAAACA 57.274 40.909 0.00 0.00 46.47 2.83
138 139 3.223423 TGCAGAGAAGACGATCAAGTC 57.777 47.619 0.00 0.00 41.23 3.01
139 140 3.519579 CATGCAGAGAAGACGATCAAGT 58.480 45.455 0.00 0.00 0.00 3.16
140 141 2.284684 GCATGCAGAGAAGACGATCAAG 59.715 50.000 14.21 0.00 0.00 3.02
141 142 2.274437 GCATGCAGAGAAGACGATCAA 58.726 47.619 14.21 0.00 0.00 2.57
142 143 1.472201 GGCATGCAGAGAAGACGATCA 60.472 52.381 21.36 0.00 0.00 2.92
143 144 1.202510 AGGCATGCAGAGAAGACGATC 60.203 52.381 21.36 0.00 0.00 3.69
144 145 0.829333 AGGCATGCAGAGAAGACGAT 59.171 50.000 21.36 0.00 0.00 3.73
145 146 0.610174 AAGGCATGCAGAGAAGACGA 59.390 50.000 21.36 0.00 0.00 4.20
146 147 1.005340 GAAGGCATGCAGAGAAGACG 58.995 55.000 21.36 0.00 0.00 4.18
147 148 1.005340 CGAAGGCATGCAGAGAAGAC 58.995 55.000 21.36 0.00 0.00 3.01
148 149 0.742281 GCGAAGGCATGCAGAGAAGA 60.742 55.000 21.36 0.00 39.62 2.87
149 150 0.743701 AGCGAAGGCATGCAGAGAAG 60.744 55.000 21.36 6.40 43.41 2.85
150 151 0.321919 AAGCGAAGGCATGCAGAGAA 60.322 50.000 21.36 0.00 43.41 2.87
151 152 0.536724 TAAGCGAAGGCATGCAGAGA 59.463 50.000 21.36 0.00 43.41 3.10
152 153 1.372582 TTAAGCGAAGGCATGCAGAG 58.627 50.000 21.36 8.62 43.41 3.35
153 154 2.042686 ATTAAGCGAAGGCATGCAGA 57.957 45.000 21.36 0.00 43.41 4.26
154 155 2.857592 AATTAAGCGAAGGCATGCAG 57.142 45.000 21.36 8.62 43.41 4.41
155 156 2.491298 TGAAATTAAGCGAAGGCATGCA 59.509 40.909 21.36 0.00 43.41 3.96
156 157 3.111098 CTGAAATTAAGCGAAGGCATGC 58.889 45.455 9.90 9.90 43.41 4.06
157 158 3.129287 ACCTGAAATTAAGCGAAGGCATG 59.871 43.478 0.00 0.00 43.41 4.06
158 159 3.356290 ACCTGAAATTAAGCGAAGGCAT 58.644 40.909 0.00 0.00 43.41 4.40
159 160 2.747446 GACCTGAAATTAAGCGAAGGCA 59.253 45.455 0.00 0.00 43.41 4.75
160 161 2.097629 GGACCTGAAATTAAGCGAAGGC 59.902 50.000 0.00 0.00 40.37 4.35
161 162 3.610911 AGGACCTGAAATTAAGCGAAGG 58.389 45.455 0.00 0.00 0.00 3.46
162 163 4.508662 AGAGGACCTGAAATTAAGCGAAG 58.491 43.478 0.00 0.00 0.00 3.79
163 164 4.504858 GAGAGGACCTGAAATTAAGCGAA 58.495 43.478 0.00 0.00 0.00 4.70
164 165 3.118738 GGAGAGGACCTGAAATTAAGCGA 60.119 47.826 0.00 0.00 0.00 4.93
165 166 3.118592 AGGAGAGGACCTGAAATTAAGCG 60.119 47.826 0.00 0.00 39.01 4.68
166 167 4.495690 AGGAGAGGACCTGAAATTAAGC 57.504 45.455 0.00 0.00 39.01 3.09
167 168 6.070538 TCAGAAGGAGAGGACCTGAAATTAAG 60.071 42.308 0.00 0.00 40.49 1.85
168 169 5.785423 TCAGAAGGAGAGGACCTGAAATTAA 59.215 40.000 0.00 0.00 40.49 1.40
169 170 5.342017 TCAGAAGGAGAGGACCTGAAATTA 58.658 41.667 0.00 0.00 40.49 1.40
170 171 4.171234 TCAGAAGGAGAGGACCTGAAATT 58.829 43.478 0.00 0.00 40.49 1.82
171 172 3.796111 TCAGAAGGAGAGGACCTGAAAT 58.204 45.455 0.00 0.00 40.49 2.17
172 173 3.260269 TCAGAAGGAGAGGACCTGAAA 57.740 47.619 0.00 0.00 40.49 2.69
173 174 3.169099 CTTCAGAAGGAGAGGACCTGAA 58.831 50.000 0.00 0.00 40.49 3.02
174 175 2.813907 CTTCAGAAGGAGAGGACCTGA 58.186 52.381 0.00 0.00 40.49 3.86
186 187 1.081892 CATGGACGTGCCTTCAGAAG 58.918 55.000 4.04 2.78 37.63 2.85
187 188 0.684535 TCATGGACGTGCCTTCAGAA 59.315 50.000 4.04 0.00 37.63 3.02
188 189 0.904649 ATCATGGACGTGCCTTCAGA 59.095 50.000 4.04 0.00 37.63 3.27
189 190 2.602257 TATCATGGACGTGCCTTCAG 57.398 50.000 4.04 0.00 37.63 3.02
190 191 3.558931 AATATCATGGACGTGCCTTCA 57.441 42.857 4.04 0.00 37.63 3.02
191 192 5.057149 AGTTAATATCATGGACGTGCCTTC 58.943 41.667 4.04 0.00 37.63 3.46
192 193 5.036117 AGTTAATATCATGGACGTGCCTT 57.964 39.130 4.04 0.00 37.63 4.35
193 194 4.689612 AGTTAATATCATGGACGTGCCT 57.310 40.909 4.04 0.00 37.63 4.75
194 195 5.294356 TGTAGTTAATATCATGGACGTGCC 58.706 41.667 4.04 0.43 37.10 5.01
195 196 6.090898 GGATGTAGTTAATATCATGGACGTGC 59.909 42.308 0.00 0.00 0.00 5.34
196 197 7.378966 AGGATGTAGTTAATATCATGGACGTG 58.621 38.462 0.00 0.00 0.00 4.49
197 198 7.451877 AGAGGATGTAGTTAATATCATGGACGT 59.548 37.037 0.00 0.00 0.00 4.34
198 199 7.831753 AGAGGATGTAGTTAATATCATGGACG 58.168 38.462 0.00 0.00 0.00 4.79
225 226 9.923143 TCGAGAGAAAACAGTTGAAGATAAATA 57.077 29.630 0.00 0.00 37.03 1.40
226 227 8.713271 GTCGAGAGAAAACAGTTGAAGATAAAT 58.287 33.333 0.00 0.00 45.01 1.40
227 228 7.709182 TGTCGAGAGAAAACAGTTGAAGATAAA 59.291 33.333 0.00 0.00 45.01 1.40
228 229 7.207383 TGTCGAGAGAAAACAGTTGAAGATAA 58.793 34.615 0.00 0.00 45.01 1.75
229 230 6.745116 TGTCGAGAGAAAACAGTTGAAGATA 58.255 36.000 0.00 0.00 45.01 1.98
230 231 5.601662 TGTCGAGAGAAAACAGTTGAAGAT 58.398 37.500 0.00 0.00 45.01 2.40
231 232 5.006153 TGTCGAGAGAAAACAGTTGAAGA 57.994 39.130 0.00 0.00 45.01 2.87
232 233 5.718649 TTGTCGAGAGAAAACAGTTGAAG 57.281 39.130 0.00 0.00 45.01 3.02
241 242 4.617959 AGTCATTCGTTGTCGAGAGAAAA 58.382 39.130 0.00 0.00 46.81 2.29
242 243 4.227538 GAGTCATTCGTTGTCGAGAGAAA 58.772 43.478 0.00 0.00 46.81 2.52
243 244 3.252458 TGAGTCATTCGTTGTCGAGAGAA 59.748 43.478 0.00 0.00 46.81 2.87
244 245 2.812011 TGAGTCATTCGTTGTCGAGAGA 59.188 45.455 0.00 0.00 46.81 3.10
245 246 3.203161 TGAGTCATTCGTTGTCGAGAG 57.797 47.619 0.00 0.00 46.81 3.20
246 247 3.004419 AGTTGAGTCATTCGTTGTCGAGA 59.996 43.478 0.00 0.00 46.81 4.04
247 248 3.309388 AGTTGAGTCATTCGTTGTCGAG 58.691 45.455 0.00 0.00 46.81 4.04
248 249 3.364889 AGTTGAGTCATTCGTTGTCGA 57.635 42.857 0.00 0.00 44.66 4.20
249 250 3.120991 GGAAGTTGAGTCATTCGTTGTCG 60.121 47.826 0.00 0.00 38.55 4.35
250 251 3.120991 CGGAAGTTGAGTCATTCGTTGTC 60.121 47.826 0.00 0.00 0.00 3.18
251 252 2.800544 CGGAAGTTGAGTCATTCGTTGT 59.199 45.455 0.00 0.00 0.00 3.32
252 253 2.800544 ACGGAAGTTGAGTCATTCGTTG 59.199 45.455 0.00 0.00 46.40 4.10
253 254 3.107642 ACGGAAGTTGAGTCATTCGTT 57.892 42.857 0.00 0.00 46.40 3.85
254 255 2.814280 ACGGAAGTTGAGTCATTCGT 57.186 45.000 0.00 0.00 46.40 3.85
255 256 3.608506 CAGTACGGAAGTTGAGTCATTCG 59.391 47.826 0.00 0.00 46.40 3.34
256 257 4.557205 ACAGTACGGAAGTTGAGTCATTC 58.443 43.478 0.00 0.00 46.40 2.67
257 258 4.281182 AGACAGTACGGAAGTTGAGTCATT 59.719 41.667 0.00 0.00 46.40 2.57
258 259 3.827302 AGACAGTACGGAAGTTGAGTCAT 59.173 43.478 0.00 0.00 46.40 3.06
259 260 3.004419 CAGACAGTACGGAAGTTGAGTCA 59.996 47.826 0.00 0.00 46.40 3.41
260 261 3.566523 CAGACAGTACGGAAGTTGAGTC 58.433 50.000 0.00 0.00 46.40 3.36
261 262 2.296471 CCAGACAGTACGGAAGTTGAGT 59.704 50.000 0.00 0.00 46.40 3.41
262 263 2.296471 ACCAGACAGTACGGAAGTTGAG 59.704 50.000 0.00 0.00 46.40 3.02
263 264 2.035449 CACCAGACAGTACGGAAGTTGA 59.965 50.000 0.00 0.00 46.40 3.18
264 265 2.035449 TCACCAGACAGTACGGAAGTTG 59.965 50.000 0.00 0.00 46.40 3.16
265 266 2.035576 GTCACCAGACAGTACGGAAGTT 59.964 50.000 0.00 0.00 43.12 2.66
266 267 1.612463 GTCACCAGACAGTACGGAAGT 59.388 52.381 0.00 0.00 45.80 3.01
267 268 1.067776 GGTCACCAGACAGTACGGAAG 60.068 57.143 0.00 0.00 46.80 3.46
268 269 0.963962 GGTCACCAGACAGTACGGAA 59.036 55.000 0.00 0.00 46.80 4.30
269 270 0.178984 TGGTCACCAGACAGTACGGA 60.179 55.000 0.00 0.00 46.80 4.69
270 271 0.677288 TTGGTCACCAGACAGTACGG 59.323 55.000 0.00 0.00 46.80 4.02
271 272 2.743636 ATTGGTCACCAGACAGTACG 57.256 50.000 0.00 0.00 46.80 3.67
272 273 4.385825 TCAAATTGGTCACCAGACAGTAC 58.614 43.478 0.00 0.00 46.80 2.73
273 274 4.698201 TCAAATTGGTCACCAGACAGTA 57.302 40.909 0.00 0.00 46.80 2.74
274 275 3.576078 TCAAATTGGTCACCAGACAGT 57.424 42.857 0.00 0.00 46.80 3.55
275 276 6.457392 CGATATTCAAATTGGTCACCAGACAG 60.457 42.308 0.00 0.00 46.80 3.51
276 277 5.353956 CGATATTCAAATTGGTCACCAGACA 59.646 40.000 0.00 0.00 46.80 3.41
277 278 5.730568 GCGATATTCAAATTGGTCACCAGAC 60.731 44.000 0.00 0.00 44.21 3.51
278 279 4.335315 GCGATATTCAAATTGGTCACCAGA 59.665 41.667 0.00 0.00 33.81 3.86
279 280 4.096231 TGCGATATTCAAATTGGTCACCAG 59.904 41.667 0.00 0.00 33.81 4.00
280 281 4.013050 TGCGATATTCAAATTGGTCACCA 58.987 39.130 0.00 0.00 0.00 4.17
281 282 4.630894 TGCGATATTCAAATTGGTCACC 57.369 40.909 0.00 0.00 0.00 4.02
282 283 7.189693 TCTATGCGATATTCAAATTGGTCAC 57.810 36.000 0.00 0.00 0.00 3.67
283 284 7.445096 ACATCTATGCGATATTCAAATTGGTCA 59.555 33.333 0.00 0.00 0.00 4.02
284 285 7.810658 ACATCTATGCGATATTCAAATTGGTC 58.189 34.615 0.00 0.00 0.00 4.02
285 286 7.750229 ACATCTATGCGATATTCAAATTGGT 57.250 32.000 0.00 0.00 0.00 3.67
286 287 8.939929 ACTACATCTATGCGATATTCAAATTGG 58.060 33.333 0.00 0.00 0.00 3.16
290 291 9.419297 GGTTACTACATCTATGCGATATTCAAA 57.581 33.333 0.00 0.00 0.00 2.69
291 292 8.033038 GGGTTACTACATCTATGCGATATTCAA 58.967 37.037 0.00 0.00 0.00 2.69
292 293 7.363530 GGGGTTACTACATCTATGCGATATTCA 60.364 40.741 0.00 0.00 0.00 2.57
293 294 6.979238 GGGGTTACTACATCTATGCGATATTC 59.021 42.308 0.00 0.00 0.00 1.75
294 295 6.668283 AGGGGTTACTACATCTATGCGATATT 59.332 38.462 0.00 0.00 0.00 1.28
295 296 6.195700 AGGGGTTACTACATCTATGCGATAT 58.804 40.000 0.00 0.00 0.00 1.63
296 297 5.577100 AGGGGTTACTACATCTATGCGATA 58.423 41.667 0.00 0.00 0.00 2.92
297 298 4.417437 AGGGGTTACTACATCTATGCGAT 58.583 43.478 0.00 0.00 0.00 4.58
298 299 3.840991 AGGGGTTACTACATCTATGCGA 58.159 45.455 0.00 0.00 0.00 5.10
299 300 4.038763 TCAAGGGGTTACTACATCTATGCG 59.961 45.833 0.00 0.00 0.00 4.73
300 301 5.304614 TCTCAAGGGGTTACTACATCTATGC 59.695 44.000 0.00 0.00 0.00 3.14
301 302 6.978674 TCTCAAGGGGTTACTACATCTATG 57.021 41.667 0.00 0.00 0.00 2.23
302 303 9.315363 CTATTCTCAAGGGGTTACTACATCTAT 57.685 37.037 0.00 0.00 0.00 1.98
303 304 8.508601 TCTATTCTCAAGGGGTTACTACATCTA 58.491 37.037 0.00 0.00 0.00 1.98
304 305 7.363031 TCTATTCTCAAGGGGTTACTACATCT 58.637 38.462 0.00 0.00 0.00 2.90
305 306 7.288158 ACTCTATTCTCAAGGGGTTACTACATC 59.712 40.741 0.00 0.00 0.00 3.06
306 307 7.133483 ACTCTATTCTCAAGGGGTTACTACAT 58.867 38.462 0.00 0.00 0.00 2.29
307 308 6.500336 ACTCTATTCTCAAGGGGTTACTACA 58.500 40.000 0.00 0.00 0.00 2.74
308 309 7.421087 AACTCTATTCTCAAGGGGTTACTAC 57.579 40.000 0.00 0.00 0.00 2.73
309 310 7.580882 GCAAACTCTATTCTCAAGGGGTTACTA 60.581 40.741 0.00 0.00 0.00 1.82
310 311 6.712276 CAAACTCTATTCTCAAGGGGTTACT 58.288 40.000 0.00 0.00 0.00 2.24
311 312 5.354513 GCAAACTCTATTCTCAAGGGGTTAC 59.645 44.000 0.00 0.00 0.00 2.50
312 313 5.013704 TGCAAACTCTATTCTCAAGGGGTTA 59.986 40.000 0.00 0.00 0.00 2.85
313 314 4.202567 TGCAAACTCTATTCTCAAGGGGTT 60.203 41.667 0.00 0.00 0.00 4.11
314 315 3.330701 TGCAAACTCTATTCTCAAGGGGT 59.669 43.478 0.00 0.00 0.00 4.95
315 316 3.955471 TGCAAACTCTATTCTCAAGGGG 58.045 45.455 0.00 0.00 0.00 4.79
316 317 5.884792 AGATTGCAAACTCTATTCTCAAGGG 59.115 40.000 1.71 0.00 0.00 3.95
317 318 6.998968 AGATTGCAAACTCTATTCTCAAGG 57.001 37.500 1.71 0.00 0.00 3.61
318 319 9.339492 GAAAAGATTGCAAACTCTATTCTCAAG 57.661 33.333 9.90 0.00 0.00 3.02
319 320 8.299570 GGAAAAGATTGCAAACTCTATTCTCAA 58.700 33.333 9.90 0.00 0.00 3.02
320 321 7.094205 GGGAAAAGATTGCAAACTCTATTCTCA 60.094 37.037 9.90 0.00 0.00 3.27
321 322 7.121907 AGGGAAAAGATTGCAAACTCTATTCTC 59.878 37.037 9.90 13.65 0.00 2.87
322 323 6.950619 AGGGAAAAGATTGCAAACTCTATTCT 59.049 34.615 9.90 0.00 0.00 2.40
323 324 7.121907 AGAGGGAAAAGATTGCAAACTCTATTC 59.878 37.037 9.90 13.47 31.61 1.75
324 325 6.950619 AGAGGGAAAAGATTGCAAACTCTATT 59.049 34.615 9.90 5.96 31.61 1.73
325 326 6.488715 AGAGGGAAAAGATTGCAAACTCTAT 58.511 36.000 9.90 0.00 31.61 1.98
326 327 5.880901 AGAGGGAAAAGATTGCAAACTCTA 58.119 37.500 9.90 0.00 31.61 2.43
327 328 4.734266 AGAGGGAAAAGATTGCAAACTCT 58.266 39.130 9.90 3.03 0.00 3.24
328 329 5.392487 GCTAGAGGGAAAAGATTGCAAACTC 60.392 44.000 9.90 0.36 0.00 3.01
329 330 4.460731 GCTAGAGGGAAAAGATTGCAAACT 59.539 41.667 1.71 2.40 0.00 2.66
330 331 4.380973 GGCTAGAGGGAAAAGATTGCAAAC 60.381 45.833 1.71 0.00 0.00 2.93
331 332 3.763897 GGCTAGAGGGAAAAGATTGCAAA 59.236 43.478 1.71 0.00 0.00 3.68
332 333 3.245229 TGGCTAGAGGGAAAAGATTGCAA 60.245 43.478 0.00 0.00 0.00 4.08
333 334 2.308570 TGGCTAGAGGGAAAAGATTGCA 59.691 45.455 0.00 0.00 0.00 4.08
334 335 3.004752 TGGCTAGAGGGAAAAGATTGC 57.995 47.619 0.00 0.00 0.00 3.56
335 336 4.140536 GGATGGCTAGAGGGAAAAGATTG 58.859 47.826 0.00 0.00 0.00 2.67
336 337 3.788142 TGGATGGCTAGAGGGAAAAGATT 59.212 43.478 0.00 0.00 0.00 2.40
337 338 3.397527 TGGATGGCTAGAGGGAAAAGAT 58.602 45.455 0.00 0.00 0.00 2.40
338 339 2.845659 TGGATGGCTAGAGGGAAAAGA 58.154 47.619 0.00 0.00 0.00 2.52
339 340 3.200825 TCTTGGATGGCTAGAGGGAAAAG 59.799 47.826 0.00 0.00 0.00 2.27
340 341 3.054361 GTCTTGGATGGCTAGAGGGAAAA 60.054 47.826 0.00 0.00 0.00 2.29
341 342 2.505819 GTCTTGGATGGCTAGAGGGAAA 59.494 50.000 0.00 0.00 0.00 3.13
342 343 2.119495 GTCTTGGATGGCTAGAGGGAA 58.881 52.381 0.00 0.00 0.00 3.97
343 344 1.292242 AGTCTTGGATGGCTAGAGGGA 59.708 52.381 0.00 0.00 0.00 4.20
344 345 1.799933 AGTCTTGGATGGCTAGAGGG 58.200 55.000 0.00 0.00 0.00 4.30
345 346 3.432890 GGAAAGTCTTGGATGGCTAGAGG 60.433 52.174 0.00 0.00 0.00 3.69
346 347 3.198635 TGGAAAGTCTTGGATGGCTAGAG 59.801 47.826 0.00 0.00 0.00 2.43
347 348 3.181329 TGGAAAGTCTTGGATGGCTAGA 58.819 45.455 0.00 0.00 0.00 2.43
348 349 3.634397 TGGAAAGTCTTGGATGGCTAG 57.366 47.619 0.00 0.00 0.00 3.42
349 350 4.380843 TTTGGAAAGTCTTGGATGGCTA 57.619 40.909 0.00 0.00 0.00 3.93
350 351 2.978156 TTGGAAAGTCTTGGATGGCT 57.022 45.000 0.00 0.00 0.00 4.75
351 352 5.394553 CCTTATTTGGAAAGTCTTGGATGGC 60.395 44.000 0.00 0.00 0.00 4.40
352 353 5.716703 ACCTTATTTGGAAAGTCTTGGATGG 59.283 40.000 0.00 0.00 0.00 3.51
353 354 6.434028 TGACCTTATTTGGAAAGTCTTGGATG 59.566 38.462 0.00 0.00 0.00 3.51
354 355 6.552008 TGACCTTATTTGGAAAGTCTTGGAT 58.448 36.000 0.00 0.00 0.00 3.41
355 356 5.947663 TGACCTTATTTGGAAAGTCTTGGA 58.052 37.500 0.00 0.00 0.00 3.53
356 357 6.840780 ATGACCTTATTTGGAAAGTCTTGG 57.159 37.500 0.00 0.00 0.00 3.61
360 361 9.952188 GCTATTTATGACCTTATTTGGAAAGTC 57.048 33.333 0.00 0.00 0.00 3.01
361 362 9.474313 TGCTATTTATGACCTTATTTGGAAAGT 57.526 29.630 0.00 0.00 0.00 2.66
362 363 9.736023 GTGCTATTTATGACCTTATTTGGAAAG 57.264 33.333 0.00 0.00 0.00 2.62
363 364 8.691797 GGTGCTATTTATGACCTTATTTGGAAA 58.308 33.333 0.00 0.00 0.00 3.13
364 365 8.058847 AGGTGCTATTTATGACCTTATTTGGAA 58.941 33.333 0.00 0.00 35.12 3.53
365 366 7.582719 AGGTGCTATTTATGACCTTATTTGGA 58.417 34.615 0.00 0.00 35.12 3.53
366 367 7.823745 AGGTGCTATTTATGACCTTATTTGG 57.176 36.000 0.00 0.00 35.12 3.28
367 368 8.902806 TCAAGGTGCTATTTATGACCTTATTTG 58.097 33.333 0.00 0.00 45.20 2.32
368 369 9.646522 ATCAAGGTGCTATTTATGACCTTATTT 57.353 29.630 0.00 0.00 45.20 1.40
370 371 9.950496 CTATCAAGGTGCTATTTATGACCTTAT 57.050 33.333 0.00 0.00 45.20 1.73
371 372 7.878127 GCTATCAAGGTGCTATTTATGACCTTA 59.122 37.037 0.00 0.00 45.20 2.69
373 374 6.183361 TGCTATCAAGGTGCTATTTATGACCT 60.183 38.462 0.00 0.00 40.71 3.85
374 375 5.997746 TGCTATCAAGGTGCTATTTATGACC 59.002 40.000 0.00 0.00 0.00 4.02
375 376 6.931281 TCTGCTATCAAGGTGCTATTTATGAC 59.069 38.462 0.00 0.00 0.00 3.06
376 377 6.931281 GTCTGCTATCAAGGTGCTATTTATGA 59.069 38.462 0.00 0.00 0.00 2.15
377 378 6.148480 GGTCTGCTATCAAGGTGCTATTTATG 59.852 42.308 0.00 0.00 0.00 1.90
378 379 6.183361 TGGTCTGCTATCAAGGTGCTATTTAT 60.183 38.462 0.00 0.00 0.00 1.40
379 380 5.130311 TGGTCTGCTATCAAGGTGCTATTTA 59.870 40.000 0.00 0.00 0.00 1.40
380 381 4.080356 TGGTCTGCTATCAAGGTGCTATTT 60.080 41.667 0.00 0.00 0.00 1.40
381 382 3.455910 TGGTCTGCTATCAAGGTGCTATT 59.544 43.478 0.00 0.00 0.00 1.73
382 383 3.041211 TGGTCTGCTATCAAGGTGCTAT 58.959 45.455 0.00 0.00 0.00 2.97
383 384 2.466846 TGGTCTGCTATCAAGGTGCTA 58.533 47.619 0.00 0.00 0.00 3.49
384 385 1.279496 TGGTCTGCTATCAAGGTGCT 58.721 50.000 0.00 0.00 0.00 4.40
385 386 2.338577 ATGGTCTGCTATCAAGGTGC 57.661 50.000 0.00 0.00 0.00 5.01
386 387 3.614092 ACAATGGTCTGCTATCAAGGTG 58.386 45.455 0.00 0.00 0.00 4.00
387 388 4.307032 AACAATGGTCTGCTATCAAGGT 57.693 40.909 0.00 0.00 0.00 3.50
388 389 5.416952 AGAAAACAATGGTCTGCTATCAAGG 59.583 40.000 0.00 0.00 0.00 3.61
389 390 6.072286 ACAGAAAACAATGGTCTGCTATCAAG 60.072 38.462 9.71 0.00 42.09 3.02
390 391 5.769662 ACAGAAAACAATGGTCTGCTATCAA 59.230 36.000 9.71 0.00 42.09 2.57
391 392 5.316167 ACAGAAAACAATGGTCTGCTATCA 58.684 37.500 9.71 0.00 42.09 2.15
392 393 5.886960 ACAGAAAACAATGGTCTGCTATC 57.113 39.130 9.71 0.00 42.09 2.08
393 394 5.351465 CGTACAGAAAACAATGGTCTGCTAT 59.649 40.000 9.71 0.00 42.09 2.97
394 395 4.688879 CGTACAGAAAACAATGGTCTGCTA 59.311 41.667 9.71 2.09 42.09 3.49
395 396 3.498397 CGTACAGAAAACAATGGTCTGCT 59.502 43.478 9.71 2.78 42.09 4.24
396 397 3.250040 ACGTACAGAAAACAATGGTCTGC 59.750 43.478 9.71 0.00 42.09 4.26
397 398 6.533819 TTACGTACAGAAAACAATGGTCTG 57.466 37.500 0.00 8.63 43.61 3.51
398 399 7.660208 AGATTTACGTACAGAAAACAATGGTCT 59.340 33.333 0.00 0.00 0.00 3.85
399 400 7.803724 AGATTTACGTACAGAAAACAATGGTC 58.196 34.615 0.00 0.00 0.00 4.02
400 401 7.739498 AGATTTACGTACAGAAAACAATGGT 57.261 32.000 0.00 0.00 0.00 3.55
464 465 3.632145 AGTTTGCTGTGTGGTTTTAGAGG 59.368 43.478 0.00 0.00 0.00 3.69
466 467 6.993308 TGTATAGTTTGCTGTGTGGTTTTAGA 59.007 34.615 0.00 0.00 0.00 2.10
476 477 8.882736 TGATTATCTTGTGTATAGTTTGCTGTG 58.117 33.333 0.00 0.00 0.00 3.66
480 481 8.279103 GCTCTGATTATCTTGTGTATAGTTTGC 58.721 37.037 0.00 0.00 0.00 3.68
487 488 5.279206 CGAGGGCTCTGATTATCTTGTGTAT 60.279 44.000 0.00 0.00 0.00 2.29
496 497 2.894731 TGATCCGAGGGCTCTGATTAT 58.105 47.619 0.00 0.00 34.41 1.28
506 507 5.414454 TGTTTAACTTGATTTGATCCGAGGG 59.586 40.000 0.00 0.00 0.00 4.30
519 520 8.141298 TGGACAGTAGGATATGTTTAACTTGA 57.859 34.615 0.00 0.00 0.00 3.02
541 542 7.450074 ACGATAGACCATTTGCTTAATATGGA 58.550 34.615 7.30 0.00 40.09 3.41
542 543 7.672983 ACGATAGACCATTTGCTTAATATGG 57.327 36.000 0.00 0.00 41.49 2.74
578 579 1.400242 GGCAGAACATTTGACGTGAGC 60.400 52.381 0.00 0.00 0.00 4.26
581 582 0.865111 TCGGCAGAACATTTGACGTG 59.135 50.000 0.00 0.00 46.81 4.49
663 1244 1.789078 GCAGCCGATCCGCAAATCAT 61.789 55.000 8.76 0.00 0.00 2.45
665 1246 2.329339 GCAGCCGATCCGCAAATC 59.671 61.111 8.76 0.00 0.00 2.17
666 1247 2.438254 TGCAGCCGATCCGCAAAT 60.438 55.556 8.76 0.00 31.46 2.32
687 1271 2.745884 CGAAGATGGTGGCGGCAA 60.746 61.111 15.50 0.00 0.00 4.52
713 1297 3.928779 GGGGCGGCATCATCTCGA 61.929 66.667 12.47 0.00 0.00 4.04
714 1298 3.541950 ATGGGGCGGCATCATCTCG 62.542 63.158 12.47 0.00 0.00 4.04
715 1299 1.673665 GATGGGGCGGCATCATCTC 60.674 63.158 25.99 11.38 35.64 2.75
716 1300 2.121992 GAGATGGGGCGGCATCATCT 62.122 60.000 31.79 31.79 46.96 2.90
717 1301 1.673665 GAGATGGGGCGGCATCATC 60.674 63.158 25.97 25.97 37.97 2.92
718 1302 2.433446 GAGATGGGGCGGCATCAT 59.567 61.111 12.47 13.96 0.00 2.45
719 1303 3.877450 GGAGATGGGGCGGCATCA 61.877 66.667 12.47 9.15 0.00 3.07
720 1304 4.650377 GGGAGATGGGGCGGCATC 62.650 72.222 12.47 6.22 0.00 3.91
746 1330 2.093783 CGATTGGGACTTTCGTAGCAAC 59.906 50.000 0.00 0.00 0.00 4.17
747 1331 2.028839 TCGATTGGGACTTTCGTAGCAA 60.029 45.455 0.00 0.00 35.57 3.91
748 1332 1.546923 TCGATTGGGACTTTCGTAGCA 59.453 47.619 0.00 0.00 35.57 3.49
749 1333 1.925185 GTCGATTGGGACTTTCGTAGC 59.075 52.381 0.00 0.00 35.57 3.58
750 1334 2.537401 GGTCGATTGGGACTTTCGTAG 58.463 52.381 0.00 0.00 37.12 3.51
751 1335 1.205417 GGGTCGATTGGGACTTTCGTA 59.795 52.381 0.00 0.00 37.12 3.43
752 1336 0.036671 GGGTCGATTGGGACTTTCGT 60.037 55.000 0.00 0.00 37.12 3.85
753 1337 0.743345 GGGGTCGATTGGGACTTTCG 60.743 60.000 0.00 0.00 37.12 3.46
754 1338 0.743345 CGGGGTCGATTGGGACTTTC 60.743 60.000 0.00 0.00 39.00 2.62
755 1339 1.298667 CGGGGTCGATTGGGACTTT 59.701 57.895 0.00 0.00 39.00 2.66
769 1353 3.579275 TCTCAGAAGAGAGACGGGG 57.421 57.895 0.00 0.00 45.73 5.73
779 1363 1.301677 GGTGGCGGCTTTCTCAGAAG 61.302 60.000 11.43 0.00 0.00 2.85
780 1364 1.302511 GGTGGCGGCTTTCTCAGAA 60.303 57.895 11.43 0.00 0.00 3.02
805 1389 3.518068 GAATTTGAGGGCGGGGCG 61.518 66.667 0.00 0.00 0.00 6.13
806 1390 3.147595 GGAATTTGAGGGCGGGGC 61.148 66.667 0.00 0.00 0.00 5.80
807 1391 1.453928 GAGGAATTTGAGGGCGGGG 60.454 63.158 0.00 0.00 0.00 5.73
808 1392 0.464554 GAGAGGAATTTGAGGGCGGG 60.465 60.000 0.00 0.00 0.00 6.13
809 1393 0.464554 GGAGAGGAATTTGAGGGCGG 60.465 60.000 0.00 0.00 0.00 6.13
827 1411 0.600255 GGGAACGCGATATGGAGTGG 60.600 60.000 15.93 0.00 0.00 4.00
916 1501 6.339220 TCCTCCTTCTCTCCTATCTATCTCT 58.661 44.000 0.00 0.00 0.00 3.10
930 1515 3.132481 CTCCGCGCTCCTCCTTCTC 62.132 68.421 5.56 0.00 0.00 2.87
932 1517 4.214327 CCTCCGCGCTCCTCCTTC 62.214 72.222 5.56 0.00 0.00 3.46
977 1595 1.534729 GTCGCTCCCCTTGAACAAAT 58.465 50.000 0.00 0.00 0.00 2.32
978 1596 0.882927 CGTCGCTCCCCTTGAACAAA 60.883 55.000 0.00 0.00 0.00 2.83
979 1597 1.301401 CGTCGCTCCCCTTGAACAA 60.301 57.895 0.00 0.00 0.00 2.83
988 1614 2.892425 CTTCATGGCGTCGCTCCC 60.892 66.667 18.11 0.57 0.00 4.30
993 1619 1.699656 CTTCCAGCTTCATGGCGTCG 61.700 60.000 0.00 0.00 40.41 5.12
1011 1637 2.121963 TCACCCTTGCAGGACCCT 60.122 61.111 0.00 0.00 37.67 4.34
1013 1639 2.360475 GCTCACCCTTGCAGGACC 60.360 66.667 0.00 0.00 37.67 4.46
1019 1645 1.949847 TAGAGCGAGCTCACCCTTGC 61.950 60.000 24.70 7.75 44.99 4.01
1041 1667 2.203538 AGGGTGCAGCCTGTTTGG 60.204 61.111 35.74 0.00 37.43 3.28
1045 1671 0.896940 CATTTGAGGGTGCAGCCTGT 60.897 55.000 40.65 19.94 37.43 4.00
1046 1672 1.601419 CCATTTGAGGGTGCAGCCTG 61.601 60.000 40.65 25.66 37.43 4.85
1100 1726 1.353394 GGTGATGGGGAGGTTAGGGG 61.353 65.000 0.00 0.00 0.00 4.79
1253 1879 3.251509 TGAAGCTGCTGAGGGGCA 61.252 61.111 1.35 0.00 40.15 5.36
1256 1882 0.535780 TGTTGTGAAGCTGCTGAGGG 60.536 55.000 1.35 0.00 0.00 4.30
1281 1913 5.362717 TCTTCAGTCGCTAATCCCTAATTCA 59.637 40.000 0.00 0.00 0.00 2.57
1335 2175 5.163513 CCCAAACTTGTGTTCTAATCATGC 58.836 41.667 0.00 0.00 34.96 4.06
1374 2214 8.608185 AATGATCCCCAAATTTACTAATGTGT 57.392 30.769 0.00 0.00 28.47 3.72
1376 2216 8.917088 CAGAATGATCCCCAAATTTACTAATGT 58.083 33.333 0.00 0.00 39.69 2.71
1427 2267 7.913789 AGAAACATGTGTTACTGGTCCTATAA 58.086 34.615 0.00 0.00 37.25 0.98
1437 2277 5.359576 TCAGGCAAAAGAAACATGTGTTACT 59.640 36.000 0.00 0.00 37.25 2.24
1442 2282 4.311816 ACTCAGGCAAAAGAAACATGTG 57.688 40.909 0.00 0.00 0.00 3.21
1445 2285 6.655078 AACATACTCAGGCAAAAGAAACAT 57.345 33.333 0.00 0.00 0.00 2.71
1485 2325 9.787532 GCAATGCAAAAACTAATGAGAGTAATA 57.212 29.630 0.00 0.00 0.00 0.98
1505 2345 9.687210 TCTTCAGAAATAAATGATATGCAATGC 57.313 29.630 0.00 0.00 0.00 3.56
1530 2370 5.023533 TGACTGCAGGGTACTATTCAATC 57.976 43.478 19.93 1.80 0.00 2.67
1544 2384 4.074970 ACAACCCTTATTTCTGACTGCAG 58.925 43.478 13.48 13.48 43.67 4.41
1577 2417 4.217510 CAGGGGAGATGGCATATTTTTCA 58.782 43.478 0.00 0.00 0.00 2.69
1588 2428 4.656112 AGTGTAGAAATACAGGGGAGATGG 59.344 45.833 0.00 0.00 0.00 3.51
1589 2429 5.878406 AGTGTAGAAATACAGGGGAGATG 57.122 43.478 0.00 0.00 0.00 2.90
1597 2437 6.323266 ACAAGTCGCTAGTGTAGAAATACAG 58.677 40.000 2.66 0.00 0.00 2.74
1630 2470 6.354130 AGCCAAACTTGAGTAGAGTACAAAA 58.646 36.000 0.00 0.00 0.00 2.44
1654 2494 1.279271 GCTTGAGTAAAGGAGGCAGGA 59.721 52.381 0.00 0.00 36.30 3.86
1655 2495 1.280421 AGCTTGAGTAAAGGAGGCAGG 59.720 52.381 0.00 0.00 36.30 4.85
1656 2496 2.777832 AGCTTGAGTAAAGGAGGCAG 57.222 50.000 0.00 0.00 36.30 4.85
1658 2498 3.055747 AGTGTAGCTTGAGTAAAGGAGGC 60.056 47.826 0.00 0.00 36.30 4.70
1659 2499 4.810191 AGTGTAGCTTGAGTAAAGGAGG 57.190 45.455 0.00 0.00 36.30 4.30
1683 2525 3.265221 AGTCTGGCAAAGGAGATGAATCA 59.735 43.478 0.00 0.00 0.00 2.57
1727 2569 4.111375 ACGGCAATGTAAACACAAACAA 57.889 36.364 0.00 0.00 0.00 2.83
1953 2818 4.416848 ACCAGGCATGTCCTATTTCCTATT 59.583 41.667 8.16 0.00 45.52 1.73
1954 2819 3.983410 ACCAGGCATGTCCTATTTCCTAT 59.017 43.478 8.16 0.00 45.52 2.57
1955 2820 3.393687 ACCAGGCATGTCCTATTTCCTA 58.606 45.455 8.16 0.00 45.52 2.94
1956 2821 2.208872 ACCAGGCATGTCCTATTTCCT 58.791 47.619 8.16 0.00 45.52 3.36
1957 2822 2.689983 CAACCAGGCATGTCCTATTTCC 59.310 50.000 8.16 0.00 45.52 3.13
1958 2823 3.356290 ACAACCAGGCATGTCCTATTTC 58.644 45.455 8.16 0.00 45.52 2.17
2167 3032 6.207417 CCCTTGTATTTTGTCTGTCACTCATT 59.793 38.462 0.00 0.00 0.00 2.57
2168 3033 5.707298 CCCTTGTATTTTGTCTGTCACTCAT 59.293 40.000 0.00 0.00 0.00 2.90
2169 3034 5.063204 CCCTTGTATTTTGTCTGTCACTCA 58.937 41.667 0.00 0.00 0.00 3.41
2170 3035 4.455877 CCCCTTGTATTTTGTCTGTCACTC 59.544 45.833 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.