Multiple sequence alignment - TraesCS6A01G036600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS6A01G036600 chr6A 100.000 2225 0 0 1 2225 17942214 17944438 0.000000e+00 4109.0
1 TraesCS6A01G036600 chr6D 94.343 495 24 4 1733 2225 17318271 17318763 0.000000e+00 756.0
2 TraesCS6A01G036600 chr6D 86.047 473 31 21 937 1409 17317607 17318044 2.000000e-130 475.0
3 TraesCS6A01G036600 chr6D 92.115 279 14 5 613 886 17317190 17317465 9.640000e-104 387.0
4 TraesCS6A01G036600 chr6D 85.256 156 16 6 217 371 17316877 17317026 1.060000e-33 154.0
5 TraesCS6A01G036600 chr6D 72.263 411 87 19 1729 2118 7192224 7191820 3.910000e-18 102.0
6 TraesCS6A01G036600 chr6D 95.918 49 2 0 896 944 17317541 17317589 1.830000e-11 80.5
7 TraesCS6A01G036600 chr6D 100.000 29 0 0 896 924 17317500 17317528 1.000000e-03 54.7
8 TraesCS6A01G036600 chr6B 83.375 806 65 40 639 1409 30323657 30324428 0.000000e+00 682.0
9 TraesCS6A01G036600 chr6B 86.897 145 13 4 217 360 30312641 30312780 8.230000e-35 158.0
10 TraesCS6A01G036600 chr6B 90.083 121 8 4 2091 2207 30324728 30324848 1.060000e-33 154.0
11 TraesCS6A01G036600 chr6B 89.000 100 8 1 217 316 30323501 30323597 1.080000e-23 121.0
12 TraesCS6A01G036600 chr6B 97.368 38 1 0 2107 2144 648447598 648447561 5.130000e-07 65.8
13 TraesCS6A01G036600 chr5B 86.607 448 43 7 1713 2144 44453262 44452816 1.550000e-131 479.0
14 TraesCS6A01G036600 chr1B 84.116 447 53 8 1715 2144 377834732 377834287 1.230000e-112 416.0
15 TraesCS6A01G036600 chr1B 88.038 209 19 3 991 1196 195102618 195102413 2.210000e-60 243.0
16 TraesCS6A01G036600 chr1B 72.000 400 72 28 1713 2081 675983630 675984020 5.090000e-12 82.4
17 TraesCS6A01G036600 chr5A 96.774 186 6 0 429 614 18658771 18658586 5.970000e-81 311.0
18 TraesCS6A01G036600 chr5A 96.774 186 6 0 430 615 495925386 495925201 5.970000e-81 311.0
19 TraesCS6A01G036600 chr5A 72.139 402 87 17 1729 2110 545835778 545836174 5.060000e-17 99.0
20 TraesCS6A01G036600 chr1A 96.277 188 7 0 426 613 483658533 483658720 2.150000e-80 309.0
21 TraesCS6A01G036600 chr1A 88.995 209 17 3 991 1196 142101608 142101813 1.020000e-63 254.0
22 TraesCS6A01G036600 chr7A 96.216 185 7 0 430 614 685390933 685390749 9.980000e-79 303.0
23 TraesCS6A01G036600 chr7A 96.196 184 7 0 430 613 51360553 51360370 3.590000e-78 302.0
24 TraesCS6A01G036600 chr7A 95.213 188 8 1 430 617 639289848 639290034 1.670000e-76 296.0
25 TraesCS6A01G036600 chr3A 96.216 185 7 0 430 614 68866487 68866671 9.980000e-79 303.0
26 TraesCS6A01G036600 chr3A 96.196 184 7 0 430 613 9970150 9970333 3.590000e-78 302.0
27 TraesCS6A01G036600 chr4A 94.271 192 10 1 427 617 587309642 587309833 2.160000e-75 292.0
28 TraesCS6A01G036600 chrUn 84.083 289 24 7 1713 1979 81567559 81567847 2.190000e-65 259.0
29 TraesCS6A01G036600 chrUn 79.856 139 24 4 1713 1850 221515640 221515505 5.060000e-17 99.0
30 TraesCS6A01G036600 chrUn 79.137 139 25 4 1713 1850 392292509 392292644 2.350000e-15 93.5
31 TraesCS6A01G036600 chr1D 87.560 209 20 3 991 1196 126972034 126972239 1.030000e-58 237.0
32 TraesCS6A01G036600 chr2D 73.219 407 80 19 1729 2113 634092608 634092209 1.080000e-23 121.0
33 TraesCS6A01G036600 chr4B 79.856 139 24 4 1713 1850 630129055 630128920 5.060000e-17 99.0
34 TraesCS6A01G036600 chr7D 94.444 54 3 0 2091 2144 1917376 1917429 1.420000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS6A01G036600 chr6A 17942214 17944438 2224 False 4109.000000 4109 100.000000 1 2225 1 chr6A.!!$F1 2224
1 TraesCS6A01G036600 chr6D 17316877 17318763 1886 False 317.866667 756 92.279833 217 2225 6 chr6D.!!$F1 2008
2 TraesCS6A01G036600 chr6B 30323501 30324848 1347 False 319.000000 682 87.486000 217 2207 3 chr6B.!!$F2 1990

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
930 1123 0.527565 CCCACCAAGGAAGCAAATCG 59.472 55.0 0.0 0.0 41.22 3.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2017 2400 0.460811 TGCAGCTAGTCAGAATGCGG 60.461 55.0 0.0 0.0 38.3 5.69 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 8.310406 GGAAGTTTTTCCCAAATTCTACATTG 57.690 34.615 0.00 0.00 46.03 2.82
32 33 8.147704 GGAAGTTTTTCCCAAATTCTACATTGA 58.852 33.333 0.00 0.00 46.03 2.57
33 34 9.541143 GAAGTTTTTCCCAAATTCTACATTGAA 57.459 29.630 0.00 0.00 0.00 2.69
34 35 9.898152 AAGTTTTTCCCAAATTCTACATTGAAA 57.102 25.926 0.00 0.00 0.00 2.69
35 36 9.898152 AGTTTTTCCCAAATTCTACATTGAAAA 57.102 25.926 0.00 0.00 0.00 2.29
60 61 9.719355 AAAAGTTCACAAACCTTTGAATTAAGT 57.281 25.926 4.77 0.00 40.55 2.24
63 64 9.965824 AGTTCACAAACCTTTGAATTAAGTATG 57.034 29.630 4.77 0.00 40.55 2.39
64 65 9.959749 GTTCACAAACCTTTGAATTAAGTATGA 57.040 29.630 4.77 0.00 40.55 2.15
82 83 7.730364 AGTATGAAATTCAAGTTCGTGAAGT 57.270 32.000 0.00 2.26 40.72 3.01
83 84 8.154649 AGTATGAAATTCAAGTTCGTGAAGTT 57.845 30.769 12.09 12.09 45.59 2.66
84 85 8.070171 AGTATGAAATTCAAGTTCGTGAAGTTG 58.930 33.333 19.42 19.42 43.65 3.16
85 86 5.577835 TGAAATTCAAGTTCGTGAAGTTGG 58.422 37.500 23.09 10.20 43.65 3.77
86 87 5.355630 TGAAATTCAAGTTCGTGAAGTTGGA 59.644 36.000 23.09 18.16 43.65 3.53
87 88 5.828299 AATTCAAGTTCGTGAAGTTGGAA 57.172 34.783 23.09 17.45 46.44 3.53
88 89 5.828299 ATTCAAGTTCGTGAAGTTGGAAA 57.172 34.783 23.09 14.79 46.44 3.13
89 90 5.630661 TTCAAGTTCGTGAAGTTGGAAAA 57.369 34.783 23.09 12.14 46.44 2.29
90 91 5.630661 TCAAGTTCGTGAAGTTGGAAAAA 57.369 34.783 23.09 7.18 46.44 1.94
121 122 8.623310 GAAGTTTTTCCAAAATTCTACGTTGA 57.377 30.769 0.00 0.00 41.64 3.18
122 123 8.989653 AAGTTTTTCCAAAATTCTACGTTGAA 57.010 26.923 14.60 14.60 0.00 2.69
123 124 8.989653 AGTTTTTCCAAAATTCTACGTTGAAA 57.010 26.923 16.09 0.97 0.00 2.69
124 125 9.425577 AGTTTTTCCAAAATTCTACGTTGAAAA 57.574 25.926 16.09 2.74 0.00 2.29
198 199 9.449719 AAAAGAGAGAAAGTGAACTACAAAAGA 57.550 29.630 0.00 0.00 0.00 2.52
199 200 9.449719 AAAGAGAGAAAGTGAACTACAAAAGAA 57.550 29.630 0.00 0.00 0.00 2.52
200 201 9.449719 AAGAGAGAAAGTGAACTACAAAAGAAA 57.550 29.630 0.00 0.00 0.00 2.52
201 202 9.103861 AGAGAGAAAGTGAACTACAAAAGAAAG 57.896 33.333 0.00 0.00 0.00 2.62
202 203 9.099454 GAGAGAAAGTGAACTACAAAAGAAAGA 57.901 33.333 0.00 0.00 0.00 2.52
203 204 9.449719 AGAGAAAGTGAACTACAAAAGAAAGAA 57.550 29.630 0.00 0.00 0.00 2.52
205 206 9.841880 AGAAAGTGAACTACAAAAGAAAGAAAC 57.158 29.630 0.00 0.00 0.00 2.78
206 207 8.981724 AAAGTGAACTACAAAAGAAAGAAACC 57.018 30.769 0.00 0.00 0.00 3.27
207 208 6.782150 AGTGAACTACAAAAGAAAGAAACCG 58.218 36.000 0.00 0.00 0.00 4.44
208 209 6.373495 AGTGAACTACAAAAGAAAGAAACCGT 59.627 34.615 0.00 0.00 0.00 4.83
209 210 6.685828 GTGAACTACAAAAGAAAGAAACCGTC 59.314 38.462 0.00 0.00 0.00 4.79
210 211 6.596497 TGAACTACAAAAGAAAGAAACCGTCT 59.404 34.615 0.00 0.00 38.69 4.18
211 212 7.765360 TGAACTACAAAAGAAAGAAACCGTCTA 59.235 33.333 0.00 0.00 34.56 2.59
212 213 7.710766 ACTACAAAAGAAAGAAACCGTCTAG 57.289 36.000 0.00 0.00 34.56 2.43
214 215 5.677567 ACAAAAGAAAGAAACCGTCTAGGA 58.322 37.500 0.00 0.00 45.00 2.94
215 216 6.117488 ACAAAAGAAAGAAACCGTCTAGGAA 58.883 36.000 0.00 0.00 45.00 3.36
221 222 7.097834 AGAAAGAAACCGTCTAGGAATACTTG 58.902 38.462 0.00 0.00 45.00 3.16
238 239 7.015389 GGAATACTTGTGGGCTTATACTAGAGT 59.985 40.741 0.00 0.00 0.00 3.24
239 240 5.599999 ACTTGTGGGCTTATACTAGAGTG 57.400 43.478 0.00 0.00 0.00 3.51
316 317 2.093306 TTAATATGCTGGATCCCGCG 57.907 50.000 21.47 0.00 0.00 6.46
321 322 2.663188 GCTGGATCCCGCGCTAAG 60.663 66.667 12.75 0.29 0.00 2.18
327 328 4.752879 TCCCGCGCTAAGGCACAC 62.753 66.667 5.56 0.00 38.60 3.82
339 340 2.671130 AGGCACACCAAGTTTTTGTG 57.329 45.000 8.65 8.65 42.96 3.33
340 341 1.899142 AGGCACACCAAGTTTTTGTGT 59.101 42.857 12.92 6.23 42.24 3.72
341 342 2.094234 AGGCACACCAAGTTTTTGTGTC 60.094 45.455 9.34 9.34 44.53 3.67
348 349 6.866248 CACACCAAGTTTTTGTGTCTTTTAGT 59.134 34.615 5.70 0.00 36.65 2.24
351 352 9.072294 CACCAAGTTTTTGTGTCTTTTAGTTAG 57.928 33.333 0.00 0.00 32.21 2.34
384 502 5.545658 AACGCATTCAAATGTGGTAGTAG 57.454 39.130 17.79 0.00 44.41 2.57
386 504 6.167685 AACGCATTCAAATGTGGTAGTAGTA 58.832 36.000 17.79 0.00 44.41 1.82
390 508 8.181573 CGCATTCAAATGTGGTAGTAGTATTTT 58.818 33.333 8.14 0.00 41.86 1.82
414 533 9.765795 TTTATTTTATTTGAACCGAAATGTGGT 57.234 25.926 0.00 0.00 42.98 4.16
419 538 6.737254 ATTTGAACCGAAATGTGGTAGTAG 57.263 37.500 0.00 0.00 39.29 2.57
421 540 5.981088 TGAACCGAAATGTGGTAGTAGTA 57.019 39.130 0.00 0.00 39.29 1.82
424 543 6.814644 TGAACCGAAATGTGGTAGTAGTATTG 59.185 38.462 0.00 0.00 39.29 1.90
425 544 6.290294 ACCGAAATGTGGTAGTAGTATTGT 57.710 37.500 0.00 0.00 38.15 2.71
426 545 6.704310 ACCGAAATGTGGTAGTAGTATTGTT 58.296 36.000 0.00 0.00 38.15 2.83
427 546 7.163441 ACCGAAATGTGGTAGTAGTATTGTTT 58.837 34.615 0.00 0.00 38.15 2.83
428 547 8.313292 ACCGAAATGTGGTAGTAGTATTGTTTA 58.687 33.333 0.00 0.00 38.15 2.01
429 548 8.814235 CCGAAATGTGGTAGTAGTATTGTTTAG 58.186 37.037 0.00 0.00 0.00 1.85
430 549 8.814235 CGAAATGTGGTAGTAGTATTGTTTAGG 58.186 37.037 0.00 0.00 0.00 2.69
431 550 9.106070 GAAATGTGGTAGTAGTATTGTTTAGGG 57.894 37.037 0.00 0.00 0.00 3.53
432 551 7.983166 ATGTGGTAGTAGTATTGTTTAGGGA 57.017 36.000 0.00 0.00 0.00 4.20
433 552 7.795534 TGTGGTAGTAGTATTGTTTAGGGAA 57.204 36.000 0.00 0.00 0.00 3.97
434 553 8.383374 TGTGGTAGTAGTATTGTTTAGGGAAT 57.617 34.615 0.00 0.00 0.00 3.01
435 554 8.262227 TGTGGTAGTAGTATTGTTTAGGGAATG 58.738 37.037 0.00 0.00 0.00 2.67
436 555 8.262933 GTGGTAGTAGTATTGTTTAGGGAATGT 58.737 37.037 0.00 0.00 0.00 2.71
437 556 8.480501 TGGTAGTAGTATTGTTTAGGGAATGTC 58.519 37.037 0.00 0.00 0.00 3.06
438 557 8.702819 GGTAGTAGTATTGTTTAGGGAATGTCT 58.297 37.037 0.00 0.00 0.00 3.41
441 560 8.925338 AGTAGTATTGTTTAGGGAATGTCTAGG 58.075 37.037 0.00 0.00 0.00 3.02
442 561 7.138054 AGTATTGTTTAGGGAATGTCTAGGG 57.862 40.000 0.00 0.00 0.00 3.53
443 562 3.926058 TGTTTAGGGAATGTCTAGGGC 57.074 47.619 0.00 0.00 0.00 5.19
444 563 3.186283 TGTTTAGGGAATGTCTAGGGCA 58.814 45.455 0.00 0.00 0.00 5.36
445 564 3.054655 TGTTTAGGGAATGTCTAGGGCAC 60.055 47.826 0.00 0.00 0.00 5.01
446 565 2.561209 TAGGGAATGTCTAGGGCACA 57.439 50.000 0.00 0.00 0.00 4.57
447 566 1.898863 AGGGAATGTCTAGGGCACAT 58.101 50.000 0.00 0.00 35.94 3.21
448 567 1.771255 AGGGAATGTCTAGGGCACATC 59.229 52.381 0.00 0.00 33.12 3.06
449 568 1.771255 GGGAATGTCTAGGGCACATCT 59.229 52.381 0.00 0.00 33.12 2.90
450 569 2.972713 GGGAATGTCTAGGGCACATCTA 59.027 50.000 0.00 0.00 33.12 1.98
451 570 3.007398 GGGAATGTCTAGGGCACATCTAG 59.993 52.174 0.00 0.00 33.12 2.43
452 571 3.898123 GGAATGTCTAGGGCACATCTAGA 59.102 47.826 0.00 0.00 40.38 2.43
453 572 4.530161 GGAATGTCTAGGGCACATCTAGAT 59.470 45.833 0.00 0.00 43.25 1.98
454 573 5.477510 GAATGTCTAGGGCACATCTAGATG 58.522 45.833 27.63 27.63 43.25 2.90
469 588 5.215252 TCTAGATGTGCCCTACTTATTGC 57.785 43.478 0.00 0.00 0.00 3.56
470 589 3.931907 AGATGTGCCCTACTTATTGCA 57.068 42.857 0.00 0.00 0.00 4.08
475 594 3.931907 TGCCCTACTTATTGCACATCT 57.068 42.857 0.00 0.00 0.00 2.90
477 596 5.366482 TGCCCTACTTATTGCACATCTAA 57.634 39.130 0.00 0.00 0.00 2.10
478 597 5.368145 TGCCCTACTTATTGCACATCTAAG 58.632 41.667 0.00 0.00 0.00 2.18
479 598 5.104527 TGCCCTACTTATTGCACATCTAAGT 60.105 40.000 12.25 12.25 38.75 2.24
480 599 5.237344 GCCCTACTTATTGCACATCTAAGTG 59.763 44.000 15.31 0.00 42.37 3.16
481 600 6.582636 CCCTACTTATTGCACATCTAAGTGA 58.417 40.000 15.31 4.80 42.05 3.41
482 601 6.703607 CCCTACTTATTGCACATCTAAGTGAG 59.296 42.308 15.31 9.27 42.05 3.51
483 602 7.268586 CCTACTTATTGCACATCTAAGTGAGT 58.731 38.462 15.31 0.00 42.05 3.41
484 603 6.974932 ACTTATTGCACATCTAAGTGAGTG 57.025 37.500 8.56 0.00 42.05 3.51
485 604 6.701340 ACTTATTGCACATCTAAGTGAGTGA 58.299 36.000 8.56 0.00 42.05 3.41
486 605 7.161404 ACTTATTGCACATCTAAGTGAGTGAA 58.839 34.615 8.56 0.00 42.05 3.18
487 606 7.826252 ACTTATTGCACATCTAAGTGAGTGAAT 59.174 33.333 8.56 0.00 42.05 2.57
488 607 6.674694 ATTGCACATCTAAGTGAGTGAATC 57.325 37.500 0.00 0.00 42.05 2.52
489 608 5.151297 TGCACATCTAAGTGAGTGAATCA 57.849 39.130 0.00 0.00 42.05 2.57
490 609 5.550290 TGCACATCTAAGTGAGTGAATCAA 58.450 37.500 0.00 0.00 42.05 2.57
491 610 5.640783 TGCACATCTAAGTGAGTGAATCAAG 59.359 40.000 0.00 0.00 42.05 3.02
492 611 5.641209 GCACATCTAAGTGAGTGAATCAAGT 59.359 40.000 0.00 0.00 42.05 3.16
493 612 6.813649 GCACATCTAAGTGAGTGAATCAAGTA 59.186 38.462 0.00 0.00 42.05 2.24
494 613 7.493971 GCACATCTAAGTGAGTGAATCAAGTAT 59.506 37.037 0.00 0.00 42.05 2.12
495 614 8.815189 CACATCTAAGTGAGTGAATCAAGTATG 58.185 37.037 0.00 0.00 42.05 2.39
496 615 8.753133 ACATCTAAGTGAGTGAATCAAGTATGA 58.247 33.333 0.00 0.00 40.43 2.15
497 616 9.591792 CATCTAAGTGAGTGAATCAAGTATGAA 57.408 33.333 0.00 0.00 40.43 2.57
498 617 9.814899 ATCTAAGTGAGTGAATCAAGTATGAAG 57.185 33.333 0.00 0.00 40.43 3.02
499 618 9.025041 TCTAAGTGAGTGAATCAAGTATGAAGA 57.975 33.333 0.00 0.00 40.43 2.87
500 619 9.299963 CTAAGTGAGTGAATCAAGTATGAAGAG 57.700 37.037 0.00 0.00 40.43 2.85
501 620 6.638610 AGTGAGTGAATCAAGTATGAAGAGG 58.361 40.000 0.00 0.00 40.43 3.69
506 625 8.558973 AGTGAATCAAGTATGAAGAGGAAAAG 57.441 34.615 0.00 0.00 39.49 2.27
507 626 8.378565 AGTGAATCAAGTATGAAGAGGAAAAGA 58.621 33.333 0.00 0.00 39.49 2.52
534 653 9.810545 AAAAAGAAAAAGAAAATATCCACACGA 57.189 25.926 0.00 0.00 0.00 4.35
535 654 9.810545 AAAAGAAAAAGAAAATATCCACACGAA 57.189 25.926 0.00 0.00 0.00 3.85
536 655 9.981114 AAAGAAAAAGAAAATATCCACACGAAT 57.019 25.926 0.00 0.00 0.00 3.34
537 656 9.981114 AAGAAAAAGAAAATATCCACACGAATT 57.019 25.926 0.00 0.00 0.00 2.17
538 657 9.981114 AGAAAAAGAAAATATCCACACGAATTT 57.019 25.926 0.00 0.00 0.00 1.82
540 659 9.757227 AAAAAGAAAATATCCACACGAATTTCA 57.243 25.926 0.00 0.00 30.16 2.69
541 660 9.757227 AAAAGAAAATATCCACACGAATTTCAA 57.243 25.926 0.00 0.00 30.16 2.69
542 661 8.742554 AAGAAAATATCCACACGAATTTCAAC 57.257 30.769 0.00 0.00 30.16 3.18
543 662 7.021196 AGAAAATATCCACACGAATTTCAACG 58.979 34.615 0.00 0.00 30.16 4.10
544 663 5.873179 AATATCCACACGAATTTCAACGT 57.127 34.783 0.00 0.00 43.50 3.99
545 664 6.971527 AATATCCACACGAATTTCAACGTA 57.028 33.333 0.00 0.00 40.76 3.57
546 665 6.971527 ATATCCACACGAATTTCAACGTAA 57.028 33.333 0.00 0.00 40.76 3.18
547 666 4.718858 TCCACACGAATTTCAACGTAAG 57.281 40.909 0.00 0.00 40.76 2.34
548 667 4.370049 TCCACACGAATTTCAACGTAAGA 58.630 39.130 0.00 0.00 40.76 2.10
549 668 4.992319 TCCACACGAATTTCAACGTAAGAT 59.008 37.500 0.00 0.00 40.76 2.40
550 669 5.119588 TCCACACGAATTTCAACGTAAGATC 59.880 40.000 0.00 0.00 40.76 2.75
551 670 5.107259 CCACACGAATTTCAACGTAAGATCA 60.107 40.000 0.00 0.00 40.76 2.92
552 671 6.359545 CACACGAATTTCAACGTAAGATCAA 58.640 36.000 0.00 0.00 40.76 2.57
553 672 7.015289 CACACGAATTTCAACGTAAGATCAAT 58.985 34.615 0.00 0.00 40.76 2.57
554 673 7.006476 CACACGAATTTCAACGTAAGATCAATG 59.994 37.037 0.00 0.00 40.76 2.82
555 674 7.095397 ACACGAATTTCAACGTAAGATCAATGA 60.095 33.333 0.00 0.00 40.76 2.57
556 675 7.904977 CACGAATTTCAACGTAAGATCAATGAT 59.095 33.333 0.00 0.00 40.76 2.45
557 676 9.093970 ACGAATTTCAACGTAAGATCAATGATA 57.906 29.630 0.00 0.00 40.92 2.15
572 691 9.800433 AGATCAATGATATAAGACTTAGATGCG 57.200 33.333 7.07 0.00 0.00 4.73
573 692 7.818493 TCAATGATATAAGACTTAGATGCGC 57.182 36.000 7.07 0.00 0.00 6.09
574 693 7.378181 TCAATGATATAAGACTTAGATGCGCA 58.622 34.615 14.96 14.96 0.00 6.09
575 694 7.872483 TCAATGATATAAGACTTAGATGCGCAA 59.128 33.333 17.11 0.00 0.00 4.85
576 695 8.663025 CAATGATATAAGACTTAGATGCGCAAT 58.337 33.333 17.11 9.28 0.00 3.56
577 696 9.875691 AATGATATAAGACTTAGATGCGCAATA 57.124 29.630 17.11 8.06 0.00 1.90
579 698 9.875691 TGATATAAGACTTAGATGCGCAATATT 57.124 29.630 17.11 0.00 0.00 1.28
584 703 7.369803 AGACTTAGATGCGCAATATTTATGG 57.630 36.000 17.11 1.28 0.00 2.74
585 704 5.942872 ACTTAGATGCGCAATATTTATGGC 58.057 37.500 17.11 0.00 0.00 4.40
593 712 8.147535 GATGCGCAATATTTATGGCACATCTAG 61.148 40.741 17.11 0.00 43.68 2.43
612 731 8.665175 CATCTAGATGTGCTTTAACAAAACTG 57.335 34.615 22.42 0.00 34.23 3.16
613 732 7.801716 TCTAGATGTGCTTTAACAAAACTGT 57.198 32.000 0.00 0.00 32.81 3.55
614 733 8.896320 TCTAGATGTGCTTTAACAAAACTGTA 57.104 30.769 0.00 0.00 32.81 2.74
615 734 9.502091 TCTAGATGTGCTTTAACAAAACTGTAT 57.498 29.630 0.00 0.00 32.81 2.29
617 736 8.801715 AGATGTGCTTTAACAAAACTGTATTG 57.198 30.769 0.00 0.00 32.81 1.90
618 737 8.413229 AGATGTGCTTTAACAAAACTGTATTGT 58.587 29.630 0.00 0.00 42.56 2.71
620 739 8.764524 TGTGCTTTAACAAAACTGTATTGTTT 57.235 26.923 9.59 0.00 45.97 2.83
621 740 9.856488 TGTGCTTTAACAAAACTGTATTGTTTA 57.144 25.926 9.59 0.00 45.97 2.01
660 779 2.676471 GGCAAGTGACCCGGCAAT 60.676 61.111 0.00 0.00 0.00 3.56
718 841 2.125106 GGGATCCGTCCTGTGTGC 60.125 66.667 5.45 0.00 44.44 4.57
794 917 0.944311 CGCCGATCTTATCCCAACCG 60.944 60.000 0.00 0.00 0.00 4.44
847 971 4.023450 CAGATTCATCCATCCAATCCAACG 60.023 45.833 0.00 0.00 0.00 4.10
924 1117 1.852633 AATAAGCCCACCAAGGAAGC 58.147 50.000 0.00 0.00 41.22 3.86
930 1123 0.527565 CCCACCAAGGAAGCAAATCG 59.472 55.000 0.00 0.00 41.22 3.34
965 1182 1.986378 CGTTTCTCTCGTTGCTAGGTG 59.014 52.381 0.00 0.00 0.00 4.00
978 1195 2.695666 TGCTAGGTGGCTAGATCTTGAC 59.304 50.000 8.45 5.64 0.00 3.18
1229 1446 1.275421 AAGAGCAAGTCCTAGGGGGC 61.275 60.000 9.46 7.79 37.52 5.80
1235 1452 3.034991 GTCCTAGGGGGCTAGGGT 58.965 66.667 9.46 0.00 44.94 4.34
1236 1453 1.459730 GTCCTAGGGGGCTAGGGTG 60.460 68.421 9.46 0.00 44.94 4.61
1237 1454 1.627777 TCCTAGGGGGCTAGGGTGA 60.628 63.158 9.46 0.00 44.94 4.02
1238 1455 1.010602 TCCTAGGGGGCTAGGGTGAT 61.011 60.000 9.46 0.00 44.94 3.06
1239 1456 0.838122 CCTAGGGGGCTAGGGTGATG 60.838 65.000 0.00 0.00 42.02 3.07
1240 1457 1.461461 TAGGGGGCTAGGGTGATGC 60.461 63.158 0.00 0.00 0.00 3.91
1241 1458 2.983706 TAGGGGGCTAGGGTGATGCC 62.984 65.000 0.00 0.00 45.42 4.40
1242 1459 2.774351 GGGGCTAGGGTGATGCCT 60.774 66.667 0.00 0.00 45.45 4.75
1243 1460 2.823758 GGGGCTAGGGTGATGCCTC 61.824 68.421 0.00 0.00 45.45 4.70
1244 1461 2.423446 GGCTAGGGTGATGCCTCG 59.577 66.667 0.00 0.00 43.05 4.63
1245 1462 2.280457 GCTAGGGTGATGCCTCGC 60.280 66.667 0.00 0.00 37.43 5.03
1286 1512 0.603569 CTTCCCGTCCGATCCATAGG 59.396 60.000 0.00 0.00 0.00 2.57
1288 1514 0.538977 TCCCGTCCGATCCATAGGTC 60.539 60.000 0.00 0.00 0.00 3.85
1302 1528 3.549019 CCATAGGTCTCTCAATCGTGTCG 60.549 52.174 0.00 0.00 0.00 4.35
1305 1531 1.741706 GGTCTCTCAATCGTGTCGGTA 59.258 52.381 0.00 0.00 0.00 4.02
1307 1533 2.419324 GTCTCTCAATCGTGTCGGTAGT 59.581 50.000 0.00 0.00 0.00 2.73
1308 1534 2.676839 TCTCTCAATCGTGTCGGTAGTC 59.323 50.000 0.00 0.00 0.00 2.59
1309 1535 2.418976 CTCTCAATCGTGTCGGTAGTCA 59.581 50.000 0.00 0.00 0.00 3.41
1310 1536 2.418976 TCTCAATCGTGTCGGTAGTCAG 59.581 50.000 0.00 0.00 0.00 3.51
1311 1537 2.156917 TCAATCGTGTCGGTAGTCAGT 58.843 47.619 0.00 0.00 0.00 3.41
1313 1539 2.631418 ATCGTGTCGGTAGTCAGTTG 57.369 50.000 0.00 0.00 0.00 3.16
1314 1540 1.311859 TCGTGTCGGTAGTCAGTTGT 58.688 50.000 0.00 0.00 0.00 3.32
1315 1541 1.265095 TCGTGTCGGTAGTCAGTTGTC 59.735 52.381 0.00 0.00 0.00 3.18
1316 1542 1.002142 CGTGTCGGTAGTCAGTTGTCA 60.002 52.381 0.00 0.00 0.00 3.58
1319 1545 4.056050 GTGTCGGTAGTCAGTTGTCAAAT 58.944 43.478 0.00 0.00 0.00 2.32
1320 1546 5.224888 GTGTCGGTAGTCAGTTGTCAAATA 58.775 41.667 0.00 0.00 0.00 1.40
1321 1547 5.693104 GTGTCGGTAGTCAGTTGTCAAATAA 59.307 40.000 0.00 0.00 0.00 1.40
1322 1548 6.201425 GTGTCGGTAGTCAGTTGTCAAATAAA 59.799 38.462 0.00 0.00 0.00 1.40
1323 1549 6.762187 TGTCGGTAGTCAGTTGTCAAATAAAA 59.238 34.615 0.00 0.00 0.00 1.52
1324 1550 7.280428 TGTCGGTAGTCAGTTGTCAAATAAAAA 59.720 33.333 0.00 0.00 0.00 1.94
1325 1551 7.797123 GTCGGTAGTCAGTTGTCAAATAAAAAG 59.203 37.037 0.00 0.00 0.00 2.27
1326 1552 7.711772 TCGGTAGTCAGTTGTCAAATAAAAAGA 59.288 33.333 0.00 0.00 0.00 2.52
1327 1553 8.504005 CGGTAGTCAGTTGTCAAATAAAAAGAT 58.496 33.333 0.00 0.00 0.00 2.40
1354 1580 2.248135 TGGCGTGTTTGGCGTGTAG 61.248 57.895 0.00 0.00 37.19 2.74
1359 1585 2.034001 GCGTGTTTGGCGTGTAGATATC 60.034 50.000 0.00 0.00 0.00 1.63
1373 1605 8.459635 GCGTGTAGATATCATCTATTTCCAGTA 58.540 37.037 5.32 0.00 43.25 2.74
1374 1606 9.776158 CGTGTAGATATCATCTATTTCCAGTAC 57.224 37.037 5.32 0.00 43.25 2.73
1396 1628 8.057623 AGTACTAGTGGACTTGCTAATTAGGTA 58.942 37.037 14.28 1.06 0.00 3.08
1409 1641 4.810191 AATTAGGTATCTGGATCTCGCC 57.190 45.455 0.00 0.00 0.00 5.54
1417 1667 1.063942 TCTGGATCTCGCCCTGTCTTA 60.064 52.381 0.00 0.00 0.00 2.10
1425 1675 4.021229 TCTCGCCCTGTCTTATGTTTCTA 58.979 43.478 0.00 0.00 0.00 2.10
1436 1686 8.722480 TGTCTTATGTTTCTATCATCTTGGTG 57.278 34.615 0.00 0.00 0.00 4.17
1463 1714 4.404507 TCTGCGTTGATTTCTGCTTAAC 57.595 40.909 0.00 0.00 0.00 2.01
1477 1728 4.713814 TCTGCTTAACTCACTGATCCATCT 59.286 41.667 0.00 0.00 0.00 2.90
1478 1729 4.763073 TGCTTAACTCACTGATCCATCTG 58.237 43.478 0.00 0.00 0.00 2.90
1479 1730 3.559242 GCTTAACTCACTGATCCATCTGC 59.441 47.826 0.00 0.00 0.00 4.26
1481 1732 5.452496 GCTTAACTCACTGATCCATCTGCTA 60.452 44.000 0.00 0.00 0.00 3.49
1482 1733 6.737720 TTAACTCACTGATCCATCTGCTAT 57.262 37.500 0.00 0.00 0.00 2.97
1483 1734 7.524532 GCTTAACTCACTGATCCATCTGCTATA 60.525 40.741 0.00 0.00 0.00 1.31
1484 1735 5.981088 ACTCACTGATCCATCTGCTATAG 57.019 43.478 0.00 0.00 0.00 1.31
1485 1736 4.220382 ACTCACTGATCCATCTGCTATAGC 59.780 45.833 18.18 18.18 42.50 2.97
1510 1764 2.111756 CAACACTTTTCTTCACTGCGC 58.888 47.619 0.00 0.00 0.00 6.09
1511 1765 0.304705 ACACTTTTCTTCACTGCGCG 59.695 50.000 0.00 0.00 0.00 6.86
1517 1862 3.197790 CTTCACTGCGCGGGGATG 61.198 66.667 24.33 21.20 0.00 3.51
1533 1908 4.621747 CGGGGATGACTTCTTCCTATATGC 60.622 50.000 10.20 0.00 39.41 3.14
1536 1911 5.012561 GGGATGACTTCTTCCTATATGCAGT 59.987 44.000 10.20 0.00 39.41 4.40
1538 1913 6.014669 GGATGACTTCTTCCTATATGCAGTCT 60.015 42.308 0.00 0.00 37.26 3.24
1549 1924 3.640000 GCAGTCTTGCGTGCGTGT 61.640 61.111 0.00 0.00 41.13 4.49
1553 1928 0.528901 AGTCTTGCGTGCGTGTTGTA 60.529 50.000 0.00 0.00 0.00 2.41
1567 1949 3.184379 CGTGTTGTATGTGTTGTGAGAGG 59.816 47.826 0.00 0.00 0.00 3.69
1579 1961 2.125753 GAGAGGTGCTCGTGCCTG 60.126 66.667 7.05 0.00 38.71 4.85
1581 1963 4.385405 GAGGTGCTCGTGCCTGCT 62.385 66.667 7.05 0.00 38.71 4.24
1582 1964 4.385405 AGGTGCTCGTGCCTGCTC 62.385 66.667 7.05 0.00 38.71 4.26
1583 1965 4.385405 GGTGCTCGTGCCTGCTCT 62.385 66.667 7.05 0.00 38.71 4.09
1585 1967 3.305516 TGCTCGTGCCTGCTCTGA 61.306 61.111 7.05 0.00 38.71 3.27
1586 1968 2.047844 GCTCGTGCCTGCTCTGAA 60.048 61.111 0.00 0.00 0.00 3.02
1587 1969 2.099431 GCTCGTGCCTGCTCTGAAG 61.099 63.158 0.00 0.00 0.00 3.02
1588 1970 1.588597 CTCGTGCCTGCTCTGAAGA 59.411 57.895 0.00 0.00 0.00 2.87
1591 1973 1.739562 GTGCCTGCTCTGAAGACGG 60.740 63.158 0.00 0.00 0.00 4.79
1594 1976 1.004560 CCTGCTCTGAAGACGGCAA 60.005 57.895 0.00 0.00 34.21 4.52
1595 1977 1.018226 CCTGCTCTGAAGACGGCAAG 61.018 60.000 0.00 0.00 34.21 4.01
1597 1979 0.319900 TGCTCTGAAGACGGCAAGAC 60.320 55.000 0.00 0.00 0.00 3.01
1598 1980 1.347817 GCTCTGAAGACGGCAAGACG 61.348 60.000 0.00 0.00 40.31 4.18
1599 1981 0.734253 CTCTGAAGACGGCAAGACGG 60.734 60.000 0.00 0.00 38.39 4.79
1600 1982 1.176619 TCTGAAGACGGCAAGACGGA 61.177 55.000 0.00 0.00 38.39 4.69
1601 1983 0.319555 CTGAAGACGGCAAGACGGAA 60.320 55.000 0.00 0.00 38.39 4.30
1602 1984 0.319555 TGAAGACGGCAAGACGGAAG 60.320 55.000 0.00 0.00 38.39 3.46
1603 1985 1.627550 GAAGACGGCAAGACGGAAGC 61.628 60.000 0.00 0.00 38.39 3.86
1604 1986 2.048127 GACGGCAAGACGGAAGCT 60.048 61.111 0.00 0.00 38.39 3.74
1605 1987 2.048127 ACGGCAAGACGGAAGCTC 60.048 61.111 0.00 0.00 38.39 4.09
1606 1988 2.048222 CGGCAAGACGGAAGCTCA 60.048 61.111 0.00 0.00 0.00 4.26
1607 1989 1.448540 CGGCAAGACGGAAGCTCAT 60.449 57.895 0.00 0.00 0.00 2.90
1608 1990 1.424493 CGGCAAGACGGAAGCTCATC 61.424 60.000 0.00 0.00 0.00 2.92
1609 1991 0.107945 GGCAAGACGGAAGCTCATCT 60.108 55.000 0.00 0.00 0.00 2.90
1610 1992 1.285578 GCAAGACGGAAGCTCATCTC 58.714 55.000 0.00 0.00 0.00 2.75
1611 1993 1.404717 GCAAGACGGAAGCTCATCTCA 60.405 52.381 0.00 0.00 0.00 3.27
1612 1994 2.538437 CAAGACGGAAGCTCATCTCAG 58.462 52.381 0.00 0.00 0.00 3.35
1613 1995 0.459489 AGACGGAAGCTCATCTCAGC 59.541 55.000 0.00 0.00 39.99 4.26
1614 1996 0.529555 GACGGAAGCTCATCTCAGCC 60.530 60.000 0.00 0.00 40.65 4.85
1615 1997 1.260538 ACGGAAGCTCATCTCAGCCA 61.261 55.000 0.00 0.00 40.65 4.75
1616 1998 0.107993 CGGAAGCTCATCTCAGCCAA 60.108 55.000 0.00 0.00 40.65 4.52
1617 1999 1.676916 CGGAAGCTCATCTCAGCCAAA 60.677 52.381 0.00 0.00 40.65 3.28
1618 2000 1.742268 GGAAGCTCATCTCAGCCAAAC 59.258 52.381 0.00 0.00 40.65 2.93
1619 2001 1.396301 GAAGCTCATCTCAGCCAAACG 59.604 52.381 0.00 0.00 40.65 3.60
1620 2002 0.610174 AGCTCATCTCAGCCAAACGA 59.390 50.000 0.00 0.00 40.65 3.85
1621 2003 0.723981 GCTCATCTCAGCCAAACGAC 59.276 55.000 0.00 0.00 32.76 4.34
1622 2004 0.994995 CTCATCTCAGCCAAACGACG 59.005 55.000 0.00 0.00 0.00 5.12
1623 2005 0.601057 TCATCTCAGCCAAACGACGA 59.399 50.000 0.00 0.00 0.00 4.20
1624 2006 0.716108 CATCTCAGCCAAACGACGAC 59.284 55.000 0.00 0.00 0.00 4.34
1625 2007 0.603569 ATCTCAGCCAAACGACGACT 59.396 50.000 0.00 0.00 0.00 4.18
1626 2008 0.039437 TCTCAGCCAAACGACGACTC 60.039 55.000 0.00 0.00 0.00 3.36
1627 2009 1.006571 TCAGCCAAACGACGACTCC 60.007 57.895 0.00 0.00 0.00 3.85
1628 2010 1.300620 CAGCCAAACGACGACTCCA 60.301 57.895 0.00 0.00 0.00 3.86
1629 2011 1.300697 AGCCAAACGACGACTCCAC 60.301 57.895 0.00 0.00 0.00 4.02
1630 2012 2.315386 GCCAAACGACGACTCCACC 61.315 63.158 0.00 0.00 0.00 4.61
1631 2013 1.666872 CCAAACGACGACTCCACCC 60.667 63.158 0.00 0.00 0.00 4.61
1632 2014 1.068417 CAAACGACGACTCCACCCA 59.932 57.895 0.00 0.00 0.00 4.51
1633 2015 0.531090 CAAACGACGACTCCACCCAA 60.531 55.000 0.00 0.00 0.00 4.12
1634 2016 0.249741 AAACGACGACTCCACCCAAG 60.250 55.000 0.00 0.00 0.00 3.61
1635 2017 2.095978 AACGACGACTCCACCCAAGG 62.096 60.000 0.00 0.00 0.00 3.61
1636 2018 2.273179 CGACGACTCCACCCAAGGA 61.273 63.158 0.00 0.00 36.00 3.36
1637 2019 1.812686 CGACGACTCCACCCAAGGAA 61.813 60.000 0.00 0.00 37.20 3.36
1638 2020 0.395312 GACGACTCCACCCAAGGAAA 59.605 55.000 0.00 0.00 37.20 3.13
1639 2021 1.003233 GACGACTCCACCCAAGGAAAT 59.997 52.381 0.00 0.00 37.20 2.17
1640 2022 1.003233 ACGACTCCACCCAAGGAAATC 59.997 52.381 0.00 0.00 37.20 2.17
1641 2023 1.003118 CGACTCCACCCAAGGAAATCA 59.997 52.381 0.00 0.00 37.20 2.57
1642 2024 2.716217 GACTCCACCCAAGGAAATCAG 58.284 52.381 0.00 0.00 37.20 2.90
1643 2025 1.355720 ACTCCACCCAAGGAAATCAGG 59.644 52.381 0.00 0.00 37.20 3.86
1644 2026 0.704076 TCCACCCAAGGAAATCAGGG 59.296 55.000 0.00 0.00 46.96 4.45
1645 2027 0.324645 CCACCCAAGGAAATCAGGGG 60.325 60.000 0.00 0.00 45.83 4.79
1646 2028 0.704076 CACCCAAGGAAATCAGGGGA 59.296 55.000 1.34 0.00 45.83 4.81
1647 2029 1.077005 CACCCAAGGAAATCAGGGGAA 59.923 52.381 1.34 0.00 45.83 3.97
1648 2030 1.359130 ACCCAAGGAAATCAGGGGAAG 59.641 52.381 1.34 0.00 45.83 3.46
1649 2031 1.640670 CCCAAGGAAATCAGGGGAAGA 59.359 52.381 0.00 0.00 41.49 2.87
1650 2032 2.245806 CCCAAGGAAATCAGGGGAAGAT 59.754 50.000 0.00 0.00 41.49 2.40
1651 2033 3.310141 CCCAAGGAAATCAGGGGAAGATT 60.310 47.826 0.00 0.00 41.49 2.40
1652 2034 4.356436 CCAAGGAAATCAGGGGAAGATTT 58.644 43.478 0.00 0.00 45.55 2.17
1653 2035 4.161001 CCAAGGAAATCAGGGGAAGATTTG 59.839 45.833 5.94 0.00 43.60 2.32
1654 2036 4.682021 AGGAAATCAGGGGAAGATTTGT 57.318 40.909 5.94 0.00 43.60 2.83
1655 2037 4.347607 AGGAAATCAGGGGAAGATTTGTG 58.652 43.478 5.94 0.00 43.60 3.33
1656 2038 4.089361 GGAAATCAGGGGAAGATTTGTGT 58.911 43.478 5.94 0.00 43.60 3.72
1657 2039 4.082026 GGAAATCAGGGGAAGATTTGTGTG 60.082 45.833 5.94 0.00 43.60 3.82
1658 2040 3.814504 ATCAGGGGAAGATTTGTGTGT 57.185 42.857 0.00 0.00 0.00 3.72
1659 2041 2.862541 TCAGGGGAAGATTTGTGTGTG 58.137 47.619 0.00 0.00 0.00 3.82
1660 2042 2.174639 TCAGGGGAAGATTTGTGTGTGT 59.825 45.455 0.00 0.00 0.00 3.72
1661 2043 2.294233 CAGGGGAAGATTTGTGTGTGTG 59.706 50.000 0.00 0.00 0.00 3.82
1662 2044 2.091885 AGGGGAAGATTTGTGTGTGTGT 60.092 45.455 0.00 0.00 0.00 3.72
1663 2045 2.034558 GGGGAAGATTTGTGTGTGTGTG 59.965 50.000 0.00 0.00 0.00 3.82
1664 2046 2.687935 GGGAAGATTTGTGTGTGTGTGT 59.312 45.455 0.00 0.00 0.00 3.72
1665 2047 3.489059 GGGAAGATTTGTGTGTGTGTGTG 60.489 47.826 0.00 0.00 0.00 3.82
1666 2048 3.128589 GGAAGATTTGTGTGTGTGTGTGT 59.871 43.478 0.00 0.00 0.00 3.72
1667 2049 3.763097 AGATTTGTGTGTGTGTGTGTG 57.237 42.857 0.00 0.00 0.00 3.82
1668 2050 3.081061 AGATTTGTGTGTGTGTGTGTGT 58.919 40.909 0.00 0.00 0.00 3.72
1669 2051 2.695613 TTTGTGTGTGTGTGTGTGTG 57.304 45.000 0.00 0.00 0.00 3.82
1670 2052 1.598882 TTGTGTGTGTGTGTGTGTGT 58.401 45.000 0.00 0.00 0.00 3.72
1671 2053 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1672 2054 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1673 2055 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1674 2056 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1675 2057 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1676 2058 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1677 2059 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1678 2060 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1679 2061 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1680 2062 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1681 2063 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1682 2064 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1683 2065 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1684 2066 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1685 2067 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1686 2068 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1687 2069 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1688 2070 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1689 2071 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1690 2072 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1691 2073 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1692 2074 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1693 2075 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1694 2076 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1695 2077 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1696 2078 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1697 2079 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1698 2080 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1699 2081 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1700 2082 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1701 2083 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1702 2084 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1703 2085 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1704 2086 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1705 2087 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1706 2088 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1707 2089 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1708 2090 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1709 2091 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1710 2092 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1711 2093 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1712 2094 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1713 2095 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1714 2096 1.152510 GTGTGTGTGTGTGTGTGTGA 58.847 50.000 0.00 0.00 0.00 3.58
1715 2097 1.533299 GTGTGTGTGTGTGTGTGTGAA 59.467 47.619 0.00 0.00 0.00 3.18
1716 2098 2.031595 GTGTGTGTGTGTGTGTGTGAAA 60.032 45.455 0.00 0.00 0.00 2.69
1717 2099 2.225255 TGTGTGTGTGTGTGTGTGAAAG 59.775 45.455 0.00 0.00 0.00 2.62
1718 2100 1.809547 TGTGTGTGTGTGTGTGAAAGG 59.190 47.619 0.00 0.00 0.00 3.11
1719 2101 2.080693 GTGTGTGTGTGTGTGAAAGGA 58.919 47.619 0.00 0.00 0.00 3.36
1720 2102 2.486203 GTGTGTGTGTGTGTGAAAGGAA 59.514 45.455 0.00 0.00 0.00 3.36
1721 2103 2.486203 TGTGTGTGTGTGTGAAAGGAAC 59.514 45.455 0.00 0.00 0.00 3.62
1722 2104 2.486203 GTGTGTGTGTGTGAAAGGAACA 59.514 45.455 0.00 0.00 0.00 3.18
1723 2105 2.486203 TGTGTGTGTGTGAAAGGAACAC 59.514 45.455 0.00 0.00 46.55 3.32
1730 2112 4.278678 GTGTGAAAGGAACACAGAACTG 57.721 45.455 0.00 0.00 46.53 3.16
1731 2113 2.682856 TGTGAAAGGAACACAGAACTGC 59.317 45.455 1.46 0.00 42.20 4.40
1732 2114 2.682856 GTGAAAGGAACACAGAACTGCA 59.317 45.455 1.46 0.00 38.05 4.41
1733 2115 3.316308 GTGAAAGGAACACAGAACTGCAT 59.684 43.478 1.46 0.00 38.05 3.96
1734 2116 3.953612 TGAAAGGAACACAGAACTGCATT 59.046 39.130 1.46 0.00 0.00 3.56
1735 2117 4.402155 TGAAAGGAACACAGAACTGCATTT 59.598 37.500 1.46 0.00 0.00 2.32
1736 2118 4.574599 AAGGAACACAGAACTGCATTTC 57.425 40.909 8.67 8.67 0.00 2.17
1737 2119 3.554934 AGGAACACAGAACTGCATTTCA 58.445 40.909 17.88 0.00 0.00 2.69
1738 2120 4.147321 AGGAACACAGAACTGCATTTCAT 58.853 39.130 17.88 3.98 0.00 2.57
1780 2162 3.093057 TCTCCAGCTACACAGTCTGAT 57.907 47.619 6.91 0.00 31.46 2.90
1905 2287 8.474025 ACAAACATTCATGAAACCAACTCTAAA 58.526 29.630 13.09 0.00 0.00 1.85
1913 2295 7.556275 TCATGAAACCAACTCTAAACTGAAACT 59.444 33.333 0.00 0.00 0.00 2.66
1944 2326 4.893524 TCTGAAGACAACACCTAACTGAGA 59.106 41.667 0.00 0.00 0.00 3.27
2017 2400 0.370273 CAACTATCACTCGTTGGCGC 59.630 55.000 0.00 0.00 37.45 6.53
2019 2402 2.202690 TATCACTCGTTGGCGCCG 60.203 61.111 23.90 10.43 38.14 6.46
2071 2455 0.036732 ATCGCCAAAGCTTCCAGTGA 59.963 50.000 0.00 4.19 36.60 3.41
2072 2456 0.179032 TCGCCAAAGCTTCCAGTGAA 60.179 50.000 0.00 0.00 36.60 3.18
2089 2473 2.157668 GTGAAGTGCATCTGTTACACGG 59.842 50.000 0.00 0.00 39.31 4.94
2095 2479 1.732259 GCATCTGTTACACGGTCCAAG 59.268 52.381 0.00 0.00 0.00 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 7.805163 AGAATTTGGGAAAAACTTCCAGAATT 58.195 30.769 12.63 12.63 42.89 2.17
1 2 7.379059 AGAATTTGGGAAAAACTTCCAGAAT 57.621 32.000 6.26 3.07 42.89 2.40
2 3 6.806668 AGAATTTGGGAAAAACTTCCAGAA 57.193 33.333 6.26 1.01 42.89 3.02
3 4 6.836527 TGTAGAATTTGGGAAAAACTTCCAGA 59.163 34.615 6.26 0.00 42.89 3.86
4 5 7.049799 TGTAGAATTTGGGAAAAACTTCCAG 57.950 36.000 6.26 0.00 42.89 3.86
5 6 7.610580 ATGTAGAATTTGGGAAAAACTTCCA 57.389 32.000 6.26 0.00 42.89 3.53
6 7 8.147704 TCAATGTAGAATTTGGGAAAAACTTCC 58.852 33.333 0.00 0.00 40.38 3.46
7 8 9.541143 TTCAATGTAGAATTTGGGAAAAACTTC 57.459 29.630 0.00 0.00 0.00 3.01
8 9 9.898152 TTTCAATGTAGAATTTGGGAAAAACTT 57.102 25.926 0.00 0.00 0.00 2.66
9 10 9.898152 TTTTCAATGTAGAATTTGGGAAAAACT 57.102 25.926 0.00 0.00 32.12 2.66
34 35 9.719355 ACTTAATTCAAAGGTTTGTGAACTTTT 57.281 25.926 2.49 0.00 43.33 2.27
37 38 9.965824 CATACTTAATTCAAAGGTTTGTGAACT 57.034 29.630 2.49 0.00 36.62 3.01
38 39 9.959749 TCATACTTAATTCAAAGGTTTGTGAAC 57.040 29.630 2.49 0.00 36.62 3.18
56 57 9.268268 ACTTCACGAACTTGAATTTCATACTTA 57.732 29.630 0.00 0.00 34.96 2.24
57 58 8.154649 ACTTCACGAACTTGAATTTCATACTT 57.845 30.769 0.00 0.00 34.96 2.24
58 59 7.730364 ACTTCACGAACTTGAATTTCATACT 57.270 32.000 0.00 0.00 34.96 2.12
59 60 7.323656 CCAACTTCACGAACTTGAATTTCATAC 59.676 37.037 0.00 0.00 34.96 2.39
60 61 7.227711 TCCAACTTCACGAACTTGAATTTCATA 59.772 33.333 0.00 0.00 34.96 2.15
61 62 6.039270 TCCAACTTCACGAACTTGAATTTCAT 59.961 34.615 0.00 0.00 34.96 2.57
62 63 5.355630 TCCAACTTCACGAACTTGAATTTCA 59.644 36.000 0.00 0.00 34.96 2.69
63 64 5.816919 TCCAACTTCACGAACTTGAATTTC 58.183 37.500 0.00 0.00 34.96 2.17
64 65 5.828299 TCCAACTTCACGAACTTGAATTT 57.172 34.783 0.00 0.00 34.96 1.82
65 66 5.828299 TTCCAACTTCACGAACTTGAATT 57.172 34.783 0.00 0.00 34.96 2.17
66 67 5.828299 TTTCCAACTTCACGAACTTGAAT 57.172 34.783 0.00 0.00 34.96 2.57
67 68 5.630661 TTTTCCAACTTCACGAACTTGAA 57.369 34.783 0.00 0.00 34.30 2.69
68 69 5.630661 TTTTTCCAACTTCACGAACTTGA 57.369 34.783 0.00 0.00 0.00 3.02
95 96 7.703197 TCAACGTAGAATTTTGGAAAAACTTCC 59.297 33.333 0.00 0.00 41.48 3.46
96 97 8.623310 TCAACGTAGAATTTTGGAAAAACTTC 57.377 30.769 0.00 0.00 0.00 3.01
97 98 8.989653 TTCAACGTAGAATTTTGGAAAAACTT 57.010 26.923 0.00 0.00 0.00 2.66
98 99 8.989653 TTTCAACGTAGAATTTTGGAAAAACT 57.010 26.923 0.00 0.00 0.00 2.66
172 173 9.449719 TCTTTTGTAGTTCACTTTCTCTCTTTT 57.550 29.630 0.00 0.00 0.00 2.27
173 174 9.449719 TTCTTTTGTAGTTCACTTTCTCTCTTT 57.550 29.630 0.00 0.00 0.00 2.52
174 175 9.449719 TTTCTTTTGTAGTTCACTTTCTCTCTT 57.550 29.630 0.00 0.00 0.00 2.85
175 176 9.103861 CTTTCTTTTGTAGTTCACTTTCTCTCT 57.896 33.333 0.00 0.00 0.00 3.10
176 177 9.099454 TCTTTCTTTTGTAGTTCACTTTCTCTC 57.901 33.333 0.00 0.00 0.00 3.20
177 178 9.449719 TTCTTTCTTTTGTAGTTCACTTTCTCT 57.550 29.630 0.00 0.00 0.00 3.10
179 180 9.841880 GTTTCTTTCTTTTGTAGTTCACTTTCT 57.158 29.630 0.00 0.00 0.00 2.52
180 181 9.073368 GGTTTCTTTCTTTTGTAGTTCACTTTC 57.927 33.333 0.00 0.00 0.00 2.62
181 182 7.753580 CGGTTTCTTTCTTTTGTAGTTCACTTT 59.246 33.333 0.00 0.00 0.00 2.66
182 183 7.094506 ACGGTTTCTTTCTTTTGTAGTTCACTT 60.095 33.333 0.00 0.00 0.00 3.16
183 184 6.373495 ACGGTTTCTTTCTTTTGTAGTTCACT 59.627 34.615 0.00 0.00 0.00 3.41
184 185 6.549061 ACGGTTTCTTTCTTTTGTAGTTCAC 58.451 36.000 0.00 0.00 0.00 3.18
185 186 6.596497 AGACGGTTTCTTTCTTTTGTAGTTCA 59.404 34.615 0.00 0.00 0.00 3.18
186 187 7.012959 AGACGGTTTCTTTCTTTTGTAGTTC 57.987 36.000 0.00 0.00 0.00 3.01
187 188 6.997239 AGACGGTTTCTTTCTTTTGTAGTT 57.003 33.333 0.00 0.00 0.00 2.24
188 189 6.704937 CCTAGACGGTTTCTTTCTTTTGTAGT 59.295 38.462 0.00 0.00 35.55 2.73
189 190 6.927381 TCCTAGACGGTTTCTTTCTTTTGTAG 59.073 38.462 0.00 0.00 35.55 2.74
190 191 6.819284 TCCTAGACGGTTTCTTTCTTTTGTA 58.181 36.000 0.00 0.00 35.55 2.41
191 192 5.677567 TCCTAGACGGTTTCTTTCTTTTGT 58.322 37.500 0.00 0.00 35.55 2.83
192 193 6.613755 TTCCTAGACGGTTTCTTTCTTTTG 57.386 37.500 0.00 0.00 35.55 2.44
193 194 8.155510 AGTATTCCTAGACGGTTTCTTTCTTTT 58.844 33.333 0.00 0.00 35.55 2.27
194 195 7.677892 AGTATTCCTAGACGGTTTCTTTCTTT 58.322 34.615 0.00 0.00 35.55 2.52
195 196 7.242322 AGTATTCCTAGACGGTTTCTTTCTT 57.758 36.000 0.00 0.00 35.55 2.52
196 197 6.854091 AGTATTCCTAGACGGTTTCTTTCT 57.146 37.500 0.00 0.00 35.55 2.52
197 198 6.872547 ACAAGTATTCCTAGACGGTTTCTTTC 59.127 38.462 0.00 0.00 35.55 2.62
198 199 6.649557 CACAAGTATTCCTAGACGGTTTCTTT 59.350 38.462 0.00 0.00 35.55 2.52
199 200 6.164176 CACAAGTATTCCTAGACGGTTTCTT 58.836 40.000 0.00 0.00 35.55 2.52
200 201 5.337330 CCACAAGTATTCCTAGACGGTTTCT 60.337 44.000 0.00 0.00 38.51 2.52
201 202 4.868734 CCACAAGTATTCCTAGACGGTTTC 59.131 45.833 0.00 0.00 0.00 2.78
202 203 4.323257 CCCACAAGTATTCCTAGACGGTTT 60.323 45.833 0.00 0.00 0.00 3.27
203 204 3.197116 CCCACAAGTATTCCTAGACGGTT 59.803 47.826 0.00 0.00 0.00 4.44
204 205 2.764572 CCCACAAGTATTCCTAGACGGT 59.235 50.000 0.00 0.00 0.00 4.83
205 206 2.483188 GCCCACAAGTATTCCTAGACGG 60.483 54.545 0.00 0.00 0.00 4.79
206 207 2.431057 AGCCCACAAGTATTCCTAGACG 59.569 50.000 0.00 0.00 0.00 4.18
207 208 4.489306 AAGCCCACAAGTATTCCTAGAC 57.511 45.455 0.00 0.00 0.00 2.59
208 209 7.073854 AGTATAAGCCCACAAGTATTCCTAGA 58.926 38.462 0.00 0.00 0.00 2.43
209 210 7.304497 AGTATAAGCCCACAAGTATTCCTAG 57.696 40.000 0.00 0.00 0.00 3.02
210 211 8.229605 TCTAGTATAAGCCCACAAGTATTCCTA 58.770 37.037 0.00 0.00 0.00 2.94
211 212 7.073854 TCTAGTATAAGCCCACAAGTATTCCT 58.926 38.462 0.00 0.00 0.00 3.36
212 213 7.015389 ACTCTAGTATAAGCCCACAAGTATTCC 59.985 40.741 0.00 0.00 0.00 3.01
213 214 7.868415 CACTCTAGTATAAGCCCACAAGTATTC 59.132 40.741 0.00 0.00 0.00 1.75
214 215 7.563924 TCACTCTAGTATAAGCCCACAAGTATT 59.436 37.037 0.00 0.00 0.00 1.89
215 216 7.067421 TCACTCTAGTATAAGCCCACAAGTAT 58.933 38.462 0.00 0.00 0.00 2.12
221 222 4.499357 CCGTTCACTCTAGTATAAGCCCAC 60.499 50.000 0.00 0.00 0.00 4.61
238 239 8.731275 ATCATATTTAATTGACTCACCGTTCA 57.269 30.769 0.00 0.00 0.00 3.18
316 317 3.123050 CAAAAACTTGGTGTGCCTTAGC 58.877 45.455 0.00 0.00 40.48 3.09
321 322 2.094234 AGACACAAAAACTTGGTGTGCC 60.094 45.455 4.29 0.00 45.09 5.01
327 328 9.849166 TTCTAACTAAAAGACACAAAAACTTGG 57.151 29.630 0.00 0.00 0.00 3.61
341 342 9.820229 TGCGTTTCAACATATTCTAACTAAAAG 57.180 29.630 0.00 0.00 0.00 2.27
359 360 3.724508 ACCACATTTGAATGCGTTTCA 57.275 38.095 3.71 0.00 42.62 2.69
360 361 4.794169 ACTACCACATTTGAATGCGTTTC 58.206 39.130 3.71 0.00 40.04 2.78
391 509 8.581578 ACTACCACATTTCGGTTCAAATAAAAT 58.418 29.630 0.00 0.00 37.99 1.82
394 512 7.879160 ACTACTACCACATTTCGGTTCAAATAA 59.121 33.333 0.00 0.00 37.99 1.40
395 513 7.388437 ACTACTACCACATTTCGGTTCAAATA 58.612 34.615 0.00 0.00 37.99 1.40
396 514 6.235664 ACTACTACCACATTTCGGTTCAAAT 58.764 36.000 0.00 0.00 37.99 2.32
419 538 5.763698 GCCCTAGACATTCCCTAAACAATAC 59.236 44.000 0.00 0.00 0.00 1.89
421 540 4.229582 TGCCCTAGACATTCCCTAAACAAT 59.770 41.667 0.00 0.00 0.00 2.71
424 543 3.054655 TGTGCCCTAGACATTCCCTAAAC 60.055 47.826 0.00 0.00 0.00 2.01
425 544 3.186283 TGTGCCCTAGACATTCCCTAAA 58.814 45.455 0.00 0.00 0.00 1.85
426 545 2.840511 TGTGCCCTAGACATTCCCTAA 58.159 47.619 0.00 0.00 0.00 2.69
427 546 2.561209 TGTGCCCTAGACATTCCCTA 57.439 50.000 0.00 0.00 0.00 3.53
428 547 1.771255 GATGTGCCCTAGACATTCCCT 59.229 52.381 0.00 0.00 34.10 4.20
429 548 1.771255 AGATGTGCCCTAGACATTCCC 59.229 52.381 0.00 0.00 34.10 3.97
430 549 3.898123 TCTAGATGTGCCCTAGACATTCC 59.102 47.826 0.00 0.00 38.08 3.01
431 550 5.477510 CATCTAGATGTGCCCTAGACATTC 58.522 45.833 22.42 0.00 43.57 2.67
432 551 5.480642 CATCTAGATGTGCCCTAGACATT 57.519 43.478 22.42 0.00 43.57 2.71
445 564 5.641209 GCAATAAGTAGGGCACATCTAGATG 59.359 44.000 27.63 27.63 44.15 2.90
446 565 5.307976 TGCAATAAGTAGGGCACATCTAGAT 59.692 40.000 0.00 0.00 0.00 1.98
447 566 4.653801 TGCAATAAGTAGGGCACATCTAGA 59.346 41.667 0.00 0.00 0.00 2.43
448 567 4.960938 TGCAATAAGTAGGGCACATCTAG 58.039 43.478 0.00 0.00 0.00 2.43
450 569 3.931907 TGCAATAAGTAGGGCACATCT 57.068 42.857 0.00 0.00 0.00 2.90
455 574 3.931907 AGATGTGCAATAAGTAGGGCA 57.068 42.857 0.00 0.00 0.00 5.36
456 575 5.237344 CACTTAGATGTGCAATAAGTAGGGC 59.763 44.000 12.07 0.00 37.59 5.19
457 576 6.582636 TCACTTAGATGTGCAATAAGTAGGG 58.417 40.000 12.07 0.00 37.59 3.53
458 577 7.223582 CACTCACTTAGATGTGCAATAAGTAGG 59.776 40.741 12.07 10.62 37.59 3.18
459 578 7.976175 TCACTCACTTAGATGTGCAATAAGTAG 59.024 37.037 12.07 11.87 37.59 2.57
460 579 7.836842 TCACTCACTTAGATGTGCAATAAGTA 58.163 34.615 12.07 4.39 37.59 2.24
461 580 6.701340 TCACTCACTTAGATGTGCAATAAGT 58.299 36.000 8.35 8.35 39.67 2.24
462 581 7.601073 TTCACTCACTTAGATGTGCAATAAG 57.399 36.000 0.00 0.00 37.81 1.73
463 582 7.823799 TGATTCACTCACTTAGATGTGCAATAA 59.176 33.333 0.00 0.00 37.81 1.40
464 583 7.330262 TGATTCACTCACTTAGATGTGCAATA 58.670 34.615 0.00 0.00 37.81 1.90
465 584 6.175471 TGATTCACTCACTTAGATGTGCAAT 58.825 36.000 0.00 0.00 37.81 3.56
466 585 5.550290 TGATTCACTCACTTAGATGTGCAA 58.450 37.500 0.00 0.00 37.81 4.08
467 586 5.151297 TGATTCACTCACTTAGATGTGCA 57.849 39.130 0.00 0.00 37.81 4.57
468 587 5.641209 ACTTGATTCACTCACTTAGATGTGC 59.359 40.000 0.00 0.00 37.81 4.57
469 588 8.815189 CATACTTGATTCACTCACTTAGATGTG 58.185 37.037 0.00 0.00 39.15 3.21
470 589 8.753133 TCATACTTGATTCACTCACTTAGATGT 58.247 33.333 0.00 0.00 32.17 3.06
471 590 9.591792 TTCATACTTGATTCACTCACTTAGATG 57.408 33.333 0.00 0.00 32.17 2.90
472 591 9.814899 CTTCATACTTGATTCACTCACTTAGAT 57.185 33.333 0.00 0.00 32.17 1.98
473 592 9.025041 TCTTCATACTTGATTCACTCACTTAGA 57.975 33.333 0.00 0.00 32.17 2.10
474 593 9.299963 CTCTTCATACTTGATTCACTCACTTAG 57.700 37.037 0.00 0.00 32.17 2.18
475 594 8.253810 CCTCTTCATACTTGATTCACTCACTTA 58.746 37.037 0.00 0.00 32.17 2.24
476 595 7.038729 TCCTCTTCATACTTGATTCACTCACTT 60.039 37.037 0.00 0.00 32.17 3.16
477 596 6.438741 TCCTCTTCATACTTGATTCACTCACT 59.561 38.462 0.00 0.00 32.17 3.41
478 597 6.634805 TCCTCTTCATACTTGATTCACTCAC 58.365 40.000 0.00 0.00 32.17 3.51
479 598 6.857437 TCCTCTTCATACTTGATTCACTCA 57.143 37.500 0.00 0.00 0.00 3.41
480 599 8.553459 TTTTCCTCTTCATACTTGATTCACTC 57.447 34.615 0.00 0.00 0.00 3.51
481 600 8.378565 TCTTTTCCTCTTCATACTTGATTCACT 58.621 33.333 0.00 0.00 0.00 3.41
482 601 8.553459 TCTTTTCCTCTTCATACTTGATTCAC 57.447 34.615 0.00 0.00 0.00 3.18
483 602 9.573166 TTTCTTTTCCTCTTCATACTTGATTCA 57.427 29.630 0.00 0.00 0.00 2.57
510 629 9.981114 ATTCGTGTGGATATTTTCTTTTTCTTT 57.019 25.926 0.00 0.00 0.00 2.52
512 631 9.981114 AAATTCGTGTGGATATTTTCTTTTTCT 57.019 25.926 0.00 0.00 0.00 2.52
519 638 6.799925 ACGTTGAAATTCGTGTGGATATTTTC 59.200 34.615 0.00 0.00 38.85 2.29
520 639 6.674066 ACGTTGAAATTCGTGTGGATATTTT 58.326 32.000 0.00 0.00 38.85 1.82
527 646 4.718858 TCTTACGTTGAAATTCGTGTGG 57.281 40.909 0.00 0.00 40.50 4.17
528 647 5.911421 TGATCTTACGTTGAAATTCGTGTG 58.089 37.500 0.00 0.00 40.50 3.82
530 649 7.233689 TCATTGATCTTACGTTGAAATTCGTG 58.766 34.615 0.00 0.00 40.50 4.35
546 665 9.800433 CGCATCTAAGTCTTATATCATTGATCT 57.200 33.333 1.55 0.00 0.00 2.75
547 666 8.538856 GCGCATCTAAGTCTTATATCATTGATC 58.461 37.037 0.30 0.00 0.00 2.92
548 667 8.037166 TGCGCATCTAAGTCTTATATCATTGAT 58.963 33.333 5.66 4.28 0.00 2.57
549 668 7.378181 TGCGCATCTAAGTCTTATATCATTGA 58.622 34.615 5.66 0.00 0.00 2.57
550 669 7.586714 TGCGCATCTAAGTCTTATATCATTG 57.413 36.000 5.66 0.00 0.00 2.82
551 670 8.783833 ATTGCGCATCTAAGTCTTATATCATT 57.216 30.769 12.75 0.00 0.00 2.57
553 672 9.875691 AATATTGCGCATCTAAGTCTTATATCA 57.124 29.630 12.75 0.00 0.00 2.15
558 677 8.935844 CCATAAATATTGCGCATCTAAGTCTTA 58.064 33.333 12.75 1.99 0.00 2.10
559 678 7.573843 GCCATAAATATTGCGCATCTAAGTCTT 60.574 37.037 12.75 0.00 0.00 3.01
560 679 6.128172 GCCATAAATATTGCGCATCTAAGTCT 60.128 38.462 12.75 0.00 0.00 3.24
561 680 6.024049 GCCATAAATATTGCGCATCTAAGTC 58.976 40.000 12.75 0.00 0.00 3.01
562 681 5.473162 TGCCATAAATATTGCGCATCTAAGT 59.527 36.000 12.75 0.00 0.00 2.24
563 682 5.796935 GTGCCATAAATATTGCGCATCTAAG 59.203 40.000 12.75 0.00 35.61 2.18
564 683 5.240403 TGTGCCATAAATATTGCGCATCTAA 59.760 36.000 12.75 0.00 39.11 2.10
565 684 4.759183 TGTGCCATAAATATTGCGCATCTA 59.241 37.500 12.75 6.81 39.11 1.98
566 685 3.569277 TGTGCCATAAATATTGCGCATCT 59.431 39.130 12.75 4.26 39.11 2.90
567 686 3.899734 TGTGCCATAAATATTGCGCATC 58.100 40.909 12.75 0.00 39.11 3.91
568 687 4.524316 ATGTGCCATAAATATTGCGCAT 57.476 36.364 12.75 15.73 44.87 4.73
569 688 3.569277 AGATGTGCCATAAATATTGCGCA 59.431 39.130 5.66 5.66 45.03 6.09
570 689 4.164822 AGATGTGCCATAAATATTGCGC 57.835 40.909 0.00 0.00 35.96 6.09
571 690 6.726258 TCTAGATGTGCCATAAATATTGCG 57.274 37.500 0.00 0.00 0.00 4.85
589 708 7.801716 ACAGTTTTGTTAAAGCACATCTAGA 57.198 32.000 0.00 0.00 32.28 2.43
593 712 8.574196 ACAATACAGTTTTGTTAAAGCACATC 57.426 30.769 3.70 0.00 38.76 3.06
607 726 9.802039 TCCCAAAGTATCTAAACAATACAGTTT 57.198 29.630 0.00 0.00 43.58 2.66
608 727 9.975218 ATCCCAAAGTATCTAAACAATACAGTT 57.025 29.630 0.00 0.00 33.00 3.16
609 728 9.396022 CATCCCAAAGTATCTAAACAATACAGT 57.604 33.333 0.00 0.00 33.00 3.55
610 729 8.840321 CCATCCCAAAGTATCTAAACAATACAG 58.160 37.037 0.00 0.00 33.00 2.74
611 730 7.284489 GCCATCCCAAAGTATCTAAACAATACA 59.716 37.037 0.00 0.00 33.00 2.29
612 731 7.519970 CGCCATCCCAAAGTATCTAAACAATAC 60.520 40.741 0.00 0.00 0.00 1.89
613 732 6.485313 CGCCATCCCAAAGTATCTAAACAATA 59.515 38.462 0.00 0.00 0.00 1.90
614 733 5.299279 CGCCATCCCAAAGTATCTAAACAAT 59.701 40.000 0.00 0.00 0.00 2.71
615 734 4.638421 CGCCATCCCAAAGTATCTAAACAA 59.362 41.667 0.00 0.00 0.00 2.83
616 735 4.080807 TCGCCATCCCAAAGTATCTAAACA 60.081 41.667 0.00 0.00 0.00 2.83
617 736 4.448210 TCGCCATCCCAAAGTATCTAAAC 58.552 43.478 0.00 0.00 0.00 2.01
618 737 4.764050 TCGCCATCCCAAAGTATCTAAA 57.236 40.909 0.00 0.00 0.00 1.85
619 738 4.974645 ATCGCCATCCCAAAGTATCTAA 57.025 40.909 0.00 0.00 0.00 2.10
620 739 5.104941 CCATATCGCCATCCCAAAGTATCTA 60.105 44.000 0.00 0.00 0.00 1.98
621 740 4.323792 CCATATCGCCATCCCAAAGTATCT 60.324 45.833 0.00 0.00 0.00 1.98
626 745 0.883833 GCCATATCGCCATCCCAAAG 59.116 55.000 0.00 0.00 0.00 2.77
631 750 0.877071 CACTTGCCATATCGCCATCC 59.123 55.000 0.00 0.00 0.00 3.51
718 841 2.432628 GGGAAGAGGACACGCACG 60.433 66.667 0.00 0.00 0.00 5.34
847 971 3.862063 CTGCTGTTTGGCGACGTGC 62.862 63.158 0.00 0.00 45.38 5.34
887 1011 5.431765 CTTATTTATGGGGGATGAGATCGG 58.568 45.833 0.00 0.00 0.00 4.18
946 1163 2.338500 CCACCTAGCAACGAGAGAAAC 58.662 52.381 0.00 0.00 0.00 2.78
965 1182 3.944087 ACAACAAGGTCAAGATCTAGCC 58.056 45.455 0.00 0.00 0.00 3.93
978 1195 2.736531 GGCCCTGCAACAACAAGG 59.263 61.111 0.00 0.00 0.00 3.61
1214 1431 2.137692 CTAGCCCCCTAGGACTTGC 58.862 63.158 11.48 7.01 37.90 4.01
1229 1446 2.423446 GGCGAGGCATCACCCTAG 59.577 66.667 0.00 0.00 40.58 3.02
1286 1512 2.419324 ACTACCGACACGATTGAGAGAC 59.581 50.000 0.00 0.00 0.00 3.36
1288 1514 2.418976 TGACTACCGACACGATTGAGAG 59.581 50.000 0.00 0.00 0.00 3.20
1309 1535 9.450807 CGACTCAAATCTTTTTATTTGACAACT 57.549 29.630 7.69 0.00 46.04 3.16
1310 1536 9.233232 ACGACTCAAATCTTTTTATTTGACAAC 57.767 29.630 7.69 3.23 46.04 3.32
1311 1537 9.232082 CACGACTCAAATCTTTTTATTTGACAA 57.768 29.630 7.69 0.00 46.04 3.18
1313 1539 7.148967 GCCACGACTCAAATCTTTTTATTTGAC 60.149 37.037 7.69 0.65 46.04 3.18
1315 1541 6.183359 CGCCACGACTCAAATCTTTTTATTTG 60.183 38.462 0.00 3.48 44.61 2.32
1316 1542 5.856455 CGCCACGACTCAAATCTTTTTATTT 59.144 36.000 0.00 0.00 0.00 1.40
1319 1545 3.810941 ACGCCACGACTCAAATCTTTTTA 59.189 39.130 0.00 0.00 0.00 1.52
1320 1546 2.616842 ACGCCACGACTCAAATCTTTTT 59.383 40.909 0.00 0.00 0.00 1.94
1321 1547 2.032030 CACGCCACGACTCAAATCTTTT 60.032 45.455 0.00 0.00 0.00 2.27
1322 1548 1.531149 CACGCCACGACTCAAATCTTT 59.469 47.619 0.00 0.00 0.00 2.52
1323 1549 1.148310 CACGCCACGACTCAAATCTT 58.852 50.000 0.00 0.00 0.00 2.40
1324 1550 0.033504 ACACGCCACGACTCAAATCT 59.966 50.000 0.00 0.00 0.00 2.40
1325 1551 0.865769 AACACGCCACGACTCAAATC 59.134 50.000 0.00 0.00 0.00 2.17
1326 1552 1.002900 CAAACACGCCACGACTCAAAT 60.003 47.619 0.00 0.00 0.00 2.32
1327 1553 0.375454 CAAACACGCCACGACTCAAA 59.625 50.000 0.00 0.00 0.00 2.69
1328 1554 1.433053 CCAAACACGCCACGACTCAA 61.433 55.000 0.00 0.00 0.00 3.02
1329 1555 1.885388 CCAAACACGCCACGACTCA 60.885 57.895 0.00 0.00 0.00 3.41
1359 1585 7.589958 AGTCCACTAGTACTGGAAATAGATG 57.410 40.000 13.86 0.00 39.60 2.90
1373 1605 7.785506 AGATACCTAATTAGCAAGTCCACTAGT 59.214 37.037 6.99 0.00 0.00 2.57
1374 1606 8.085296 CAGATACCTAATTAGCAAGTCCACTAG 58.915 40.741 6.99 0.00 0.00 2.57
1375 1607 7.015292 CCAGATACCTAATTAGCAAGTCCACTA 59.985 40.741 6.99 0.00 0.00 2.74
1376 1608 6.183361 CCAGATACCTAATTAGCAAGTCCACT 60.183 42.308 6.99 0.00 0.00 4.00
1396 1628 0.105760 AGACAGGGCGAGATCCAGAT 60.106 55.000 0.00 0.00 0.00 2.90
1409 1641 7.989741 ACCAAGATGATAGAAACATAAGACAGG 59.010 37.037 0.00 0.00 0.00 4.00
1417 1667 6.725364 AGAACCACCAAGATGATAGAAACAT 58.275 36.000 0.00 0.00 0.00 2.71
1425 1675 3.350833 GCAGAAGAACCACCAAGATGAT 58.649 45.455 0.00 0.00 0.00 2.45
1436 1686 3.814945 CAGAAATCAACGCAGAAGAACC 58.185 45.455 0.00 0.00 0.00 3.62
1463 1714 4.746729 GCTATAGCAGATGGATCAGTGAG 58.253 47.826 20.01 0.00 41.59 3.51
1478 1729 4.389077 AGAAAAGTGTTGTCGTGCTATAGC 59.611 41.667 18.18 18.18 42.50 2.97
1479 1730 6.145534 TGAAGAAAAGTGTTGTCGTGCTATAG 59.854 38.462 0.00 0.00 0.00 1.31
1481 1732 4.814234 TGAAGAAAAGTGTTGTCGTGCTAT 59.186 37.500 0.00 0.00 0.00 2.97
1482 1733 4.033587 GTGAAGAAAAGTGTTGTCGTGCTA 59.966 41.667 0.00 0.00 0.00 3.49
1483 1734 3.006940 TGAAGAAAAGTGTTGTCGTGCT 58.993 40.909 0.00 0.00 0.00 4.40
1484 1735 3.098636 GTGAAGAAAAGTGTTGTCGTGC 58.901 45.455 0.00 0.00 0.00 5.34
1485 1736 4.334443 CAGTGAAGAAAAGTGTTGTCGTG 58.666 43.478 0.00 0.00 0.00 4.35
1486 1737 3.181510 GCAGTGAAGAAAAGTGTTGTCGT 60.182 43.478 0.00 0.00 0.00 4.34
1487 1738 3.354397 GCAGTGAAGAAAAGTGTTGTCG 58.646 45.455 0.00 0.00 0.00 4.35
1488 1739 3.354397 CGCAGTGAAGAAAAGTGTTGTC 58.646 45.455 0.00 0.00 0.00 3.18
1489 1740 2.477863 GCGCAGTGAAGAAAAGTGTTGT 60.478 45.455 0.30 0.00 0.00 3.32
1490 1741 2.111756 GCGCAGTGAAGAAAAGTGTTG 58.888 47.619 0.30 0.00 0.00 3.33
1491 1742 1.268032 CGCGCAGTGAAGAAAAGTGTT 60.268 47.619 8.75 0.00 43.07 3.32
1492 1743 0.304705 CGCGCAGTGAAGAAAAGTGT 59.695 50.000 8.75 0.00 43.07 3.55
1494 1745 1.507141 CCCGCGCAGTGAAGAAAAGT 61.507 55.000 8.75 0.00 43.07 2.66
1495 1746 1.207593 CCCGCGCAGTGAAGAAAAG 59.792 57.895 8.75 0.00 43.07 2.27
1496 1747 2.258013 CCCCGCGCAGTGAAGAAAA 61.258 57.895 8.75 0.00 43.07 2.29
1510 1764 4.621747 GCATATAGGAAGAAGTCATCCCCG 60.622 50.000 0.00 0.00 34.44 5.73
1511 1765 4.287067 TGCATATAGGAAGAAGTCATCCCC 59.713 45.833 0.00 0.00 34.44 4.81
1533 1908 1.368019 CAACACGCACGCAAGACTG 60.368 57.895 0.00 0.00 43.62 3.51
1536 1911 0.510790 CATACAACACGCACGCAAGA 59.489 50.000 0.00 0.00 43.62 3.02
1538 1913 0.041751 CACATACAACACGCACGCAA 60.042 50.000 0.00 0.00 0.00 4.85
1549 1924 3.138304 GCACCTCTCACAACACATACAA 58.862 45.455 0.00 0.00 0.00 2.41
1553 1928 1.606480 CGAGCACCTCTCACAACACAT 60.606 52.381 0.00 0.00 41.98 3.21
1567 1949 3.117171 CAGAGCAGGCACGAGCAC 61.117 66.667 7.26 0.00 44.61 4.40
1574 1956 2.659016 CCGTCTTCAGAGCAGGCA 59.341 61.111 0.00 0.00 0.00 4.75
1577 1959 0.037882 TCTTGCCGTCTTCAGAGCAG 60.038 55.000 0.00 0.00 36.44 4.24
1578 1960 0.319900 GTCTTGCCGTCTTCAGAGCA 60.320 55.000 0.00 0.00 0.00 4.26
1579 1961 1.347817 CGTCTTGCCGTCTTCAGAGC 61.348 60.000 0.00 0.00 0.00 4.09
1581 1963 1.176619 TCCGTCTTGCCGTCTTCAGA 61.177 55.000 0.00 0.00 0.00 3.27
1582 1964 0.319555 TTCCGTCTTGCCGTCTTCAG 60.320 55.000 0.00 0.00 0.00 3.02
1583 1965 0.319555 CTTCCGTCTTGCCGTCTTCA 60.320 55.000 0.00 0.00 0.00 3.02
1585 1967 1.668151 GCTTCCGTCTTGCCGTCTT 60.668 57.895 0.00 0.00 0.00 3.01
1586 1968 2.048127 GCTTCCGTCTTGCCGTCT 60.048 61.111 0.00 0.00 0.00 4.18
1587 1969 2.048127 AGCTTCCGTCTTGCCGTC 60.048 61.111 0.00 0.00 0.00 4.79
1588 1970 2.048127 GAGCTTCCGTCTTGCCGT 60.048 61.111 0.00 0.00 0.00 5.68
1591 1973 1.285578 GAGATGAGCTTCCGTCTTGC 58.714 55.000 0.00 0.00 32.90 4.01
1594 1976 0.459489 GCTGAGATGAGCTTCCGTCT 59.541 55.000 0.00 0.00 35.95 4.18
1595 1977 0.529555 GGCTGAGATGAGCTTCCGTC 60.530 60.000 0.00 0.00 39.11 4.79
1597 1979 0.107993 TTGGCTGAGATGAGCTTCCG 60.108 55.000 0.00 0.00 39.11 4.30
1598 1980 1.742268 GTTTGGCTGAGATGAGCTTCC 59.258 52.381 0.00 0.00 39.11 3.46
1599 1981 1.396301 CGTTTGGCTGAGATGAGCTTC 59.604 52.381 0.00 0.00 39.11 3.86
1600 1982 1.002430 TCGTTTGGCTGAGATGAGCTT 59.998 47.619 0.00 0.00 39.11 3.74
1601 1983 0.610174 TCGTTTGGCTGAGATGAGCT 59.390 50.000 0.00 0.00 39.11 4.09
1602 1984 0.723981 GTCGTTTGGCTGAGATGAGC 59.276 55.000 0.00 0.00 38.34 4.26
1603 1985 0.994995 CGTCGTTTGGCTGAGATGAG 59.005 55.000 0.00 0.00 0.00 2.90
1604 1986 0.601057 TCGTCGTTTGGCTGAGATGA 59.399 50.000 0.00 0.00 0.00 2.92
1605 1987 0.716108 GTCGTCGTTTGGCTGAGATG 59.284 55.000 0.00 0.00 0.00 2.90
1606 1988 0.603569 AGTCGTCGTTTGGCTGAGAT 59.396 50.000 0.00 0.00 0.00 2.75
1607 1989 0.039437 GAGTCGTCGTTTGGCTGAGA 60.039 55.000 0.00 0.00 0.00 3.27
1608 1990 1.009389 GGAGTCGTCGTTTGGCTGAG 61.009 60.000 0.00 0.00 0.00 3.35
1609 1991 1.006571 GGAGTCGTCGTTTGGCTGA 60.007 57.895 0.00 0.00 0.00 4.26
1610 1992 1.300620 TGGAGTCGTCGTTTGGCTG 60.301 57.895 0.00 0.00 0.00 4.85
1611 1993 1.300697 GTGGAGTCGTCGTTTGGCT 60.301 57.895 0.00 0.00 0.00 4.75
1612 1994 2.315386 GGTGGAGTCGTCGTTTGGC 61.315 63.158 0.00 0.00 0.00 4.52
1613 1995 1.666872 GGGTGGAGTCGTCGTTTGG 60.667 63.158 0.00 0.00 0.00 3.28
1614 1996 0.531090 TTGGGTGGAGTCGTCGTTTG 60.531 55.000 0.00 0.00 0.00 2.93
1615 1997 0.249741 CTTGGGTGGAGTCGTCGTTT 60.250 55.000 0.00 0.00 0.00 3.60
1616 1998 1.366366 CTTGGGTGGAGTCGTCGTT 59.634 57.895 0.00 0.00 0.00 3.85
1617 1999 2.571216 CCTTGGGTGGAGTCGTCGT 61.571 63.158 0.00 0.00 0.00 4.34
1618 2000 1.812686 TTCCTTGGGTGGAGTCGTCG 61.813 60.000 0.00 0.00 37.43 5.12
1619 2001 0.395312 TTTCCTTGGGTGGAGTCGTC 59.605 55.000 0.00 0.00 37.43 4.20
1620 2002 1.003233 GATTTCCTTGGGTGGAGTCGT 59.997 52.381 0.00 0.00 37.43 4.34
1621 2003 1.003118 TGATTTCCTTGGGTGGAGTCG 59.997 52.381 0.00 0.00 37.43 4.18
1622 2004 2.619074 CCTGATTTCCTTGGGTGGAGTC 60.619 54.545 0.00 0.00 37.43 3.36
1623 2005 1.355720 CCTGATTTCCTTGGGTGGAGT 59.644 52.381 0.00 0.00 37.43 3.85
1624 2006 1.341383 CCCTGATTTCCTTGGGTGGAG 60.341 57.143 0.00 0.00 37.43 3.86
1625 2007 0.704076 CCCTGATTTCCTTGGGTGGA 59.296 55.000 0.00 0.00 35.13 4.02
1626 2008 0.324645 CCCCTGATTTCCTTGGGTGG 60.325 60.000 0.00 0.00 38.03 4.61
1627 2009 0.704076 TCCCCTGATTTCCTTGGGTG 59.296 55.000 0.00 0.00 38.03 4.61
1628 2010 1.359130 CTTCCCCTGATTTCCTTGGGT 59.641 52.381 0.00 0.00 38.03 4.51
1629 2011 1.640670 TCTTCCCCTGATTTCCTTGGG 59.359 52.381 0.00 0.00 39.37 4.12
1630 2012 3.677156 ATCTTCCCCTGATTTCCTTGG 57.323 47.619 0.00 0.00 0.00 3.61
1631 2013 4.774200 ACAAATCTTCCCCTGATTTCCTTG 59.226 41.667 0.00 0.00 40.76 3.61
1632 2014 4.774200 CACAAATCTTCCCCTGATTTCCTT 59.226 41.667 0.00 0.00 40.76 3.36
1633 2015 4.202716 ACACAAATCTTCCCCTGATTTCCT 60.203 41.667 0.00 0.00 40.76 3.36
1634 2016 4.082026 CACACAAATCTTCCCCTGATTTCC 60.082 45.833 0.00 0.00 40.76 3.13
1635 2017 4.524328 ACACACAAATCTTCCCCTGATTTC 59.476 41.667 0.00 0.00 40.76 2.17
1636 2018 4.281688 CACACACAAATCTTCCCCTGATTT 59.718 41.667 0.00 0.00 42.68 2.17
1637 2019 3.828451 CACACACAAATCTTCCCCTGATT 59.172 43.478 0.00 0.00 35.88 2.57
1638 2020 3.181429 ACACACACAAATCTTCCCCTGAT 60.181 43.478 0.00 0.00 0.00 2.90
1639 2021 2.174639 ACACACACAAATCTTCCCCTGA 59.825 45.455 0.00 0.00 0.00 3.86
1640 2022 2.294233 CACACACACAAATCTTCCCCTG 59.706 50.000 0.00 0.00 0.00 4.45
1641 2023 2.091885 ACACACACACAAATCTTCCCCT 60.092 45.455 0.00 0.00 0.00 4.79
1642 2024 2.034558 CACACACACACAAATCTTCCCC 59.965 50.000 0.00 0.00 0.00 4.81
1643 2025 2.687935 ACACACACACACAAATCTTCCC 59.312 45.455 0.00 0.00 0.00 3.97
1644 2026 3.128589 ACACACACACACACAAATCTTCC 59.871 43.478 0.00 0.00 0.00 3.46
1645 2027 4.097714 CACACACACACACACAAATCTTC 58.902 43.478 0.00 0.00 0.00 2.87
1646 2028 3.505680 ACACACACACACACACAAATCTT 59.494 39.130 0.00 0.00 0.00 2.40
1647 2029 3.081061 ACACACACACACACACAAATCT 58.919 40.909 0.00 0.00 0.00 2.40
1648 2030 3.170505 CACACACACACACACACAAATC 58.829 45.455 0.00 0.00 0.00 2.17
1649 2031 2.556189 ACACACACACACACACACAAAT 59.444 40.909 0.00 0.00 0.00 2.32
1650 2032 1.950216 ACACACACACACACACACAAA 59.050 42.857 0.00 0.00 0.00 2.83
1651 2033 1.265365 CACACACACACACACACACAA 59.735 47.619 0.00 0.00 0.00 3.33
1652 2034 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1653 2035 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1654 2036 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1655 2037 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1656 2038 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1657 2039 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1658 2040 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1659 2041 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1660 2042 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1661 2043 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1662 2044 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1663 2045 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1664 2046 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1665 2047 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1666 2048 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1667 2049 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1668 2050 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1669 2051 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1670 2052 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1671 2053 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1672 2054 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1673 2055 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1674 2056 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1675 2057 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1676 2058 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1677 2059 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1678 2060 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1679 2061 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1680 2062 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1681 2063 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1682 2064 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1683 2065 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1684 2066 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1685 2067 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1686 2068 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1687 2069 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1688 2070 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1689 2071 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1690 2072 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1691 2073 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1692 2074 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1693 2075 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
1694 2076 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
1695 2077 1.152510 TCACACACACACACACACAC 58.847 50.000 0.00 0.00 0.00 3.82
1696 2078 1.884235 TTCACACACACACACACACA 58.116 45.000 0.00 0.00 0.00 3.72
1697 2079 2.414029 CCTTTCACACACACACACACAC 60.414 50.000 0.00 0.00 0.00 3.82
1698 2080 1.809547 CCTTTCACACACACACACACA 59.190 47.619 0.00 0.00 0.00 3.72
1699 2081 2.080693 TCCTTTCACACACACACACAC 58.919 47.619 0.00 0.00 0.00 3.82
1700 2082 2.481289 TCCTTTCACACACACACACA 57.519 45.000 0.00 0.00 0.00 3.72
1701 2083 2.486203 TGTTCCTTTCACACACACACAC 59.514 45.455 0.00 0.00 0.00 3.82
1702 2084 2.486203 GTGTTCCTTTCACACACACACA 59.514 45.455 0.00 0.00 43.52 3.72
1703 2085 3.131240 GTGTTCCTTTCACACACACAC 57.869 47.619 0.00 0.00 43.52 3.82
1709 2091 3.487544 GCAGTTCTGTGTTCCTTTCACAC 60.488 47.826 1.78 0.00 44.19 3.82
1710 2092 2.682856 GCAGTTCTGTGTTCCTTTCACA 59.317 45.455 1.78 0.00 42.41 3.58
1711 2093 2.682856 TGCAGTTCTGTGTTCCTTTCAC 59.317 45.455 1.78 0.00 36.48 3.18
1712 2094 2.997980 TGCAGTTCTGTGTTCCTTTCA 58.002 42.857 1.78 0.00 0.00 2.69
1713 2095 4.574599 AATGCAGTTCTGTGTTCCTTTC 57.425 40.909 0.00 0.00 0.00 2.62
1714 2096 4.402155 TGAAATGCAGTTCTGTGTTCCTTT 59.598 37.500 25.47 0.60 0.00 3.11
1715 2097 3.953612 TGAAATGCAGTTCTGTGTTCCTT 59.046 39.130 25.47 0.00 0.00 3.36
1716 2098 3.554934 TGAAATGCAGTTCTGTGTTCCT 58.445 40.909 25.47 0.00 0.00 3.36
1717 2099 3.988379 TGAAATGCAGTTCTGTGTTCC 57.012 42.857 25.47 0.00 0.00 3.62
1718 2100 6.902341 TCTAATGAAATGCAGTTCTGTGTTC 58.098 36.000 25.47 0.58 0.00 3.18
1719 2101 6.882610 TCTAATGAAATGCAGTTCTGTGTT 57.117 33.333 25.47 16.78 0.00 3.32
1720 2102 7.201679 GCTATCTAATGAAATGCAGTTCTGTGT 60.202 37.037 25.47 11.66 0.00 3.72
1721 2103 7.012138 AGCTATCTAATGAAATGCAGTTCTGTG 59.988 37.037 25.47 13.81 0.00 3.66
1722 2104 7.052873 AGCTATCTAATGAAATGCAGTTCTGT 58.947 34.615 25.47 16.08 0.00 3.41
1723 2105 7.493743 AGCTATCTAATGAAATGCAGTTCTG 57.506 36.000 25.47 13.82 0.00 3.02
1724 2106 7.013083 CCAAGCTATCTAATGAAATGCAGTTCT 59.987 37.037 25.47 10.74 0.00 3.01
1725 2107 7.137426 CCAAGCTATCTAATGAAATGCAGTTC 58.863 38.462 19.55 19.55 0.00 3.01
1726 2108 6.460676 GCCAAGCTATCTAATGAAATGCAGTT 60.461 38.462 0.00 0.00 0.00 3.16
1727 2109 5.009410 GCCAAGCTATCTAATGAAATGCAGT 59.991 40.000 0.00 0.00 0.00 4.40
1728 2110 5.241064 AGCCAAGCTATCTAATGAAATGCAG 59.759 40.000 0.00 0.00 36.99 4.41
1729 2111 5.009310 CAGCCAAGCTATCTAATGAAATGCA 59.991 40.000 0.00 0.00 36.40 3.96
1730 2112 5.458891 CAGCCAAGCTATCTAATGAAATGC 58.541 41.667 0.00 0.00 36.40 3.56
1731 2113 5.766670 TCCAGCCAAGCTATCTAATGAAATG 59.233 40.000 0.00 0.00 36.40 2.32
1732 2114 5.767168 GTCCAGCCAAGCTATCTAATGAAAT 59.233 40.000 0.00 0.00 36.40 2.17
1733 2115 5.126067 GTCCAGCCAAGCTATCTAATGAAA 58.874 41.667 0.00 0.00 36.40 2.69
1734 2116 4.164030 TGTCCAGCCAAGCTATCTAATGAA 59.836 41.667 0.00 0.00 36.40 2.57
1735 2117 3.711190 TGTCCAGCCAAGCTATCTAATGA 59.289 43.478 0.00 0.00 36.40 2.57
1736 2118 4.077300 TGTCCAGCCAAGCTATCTAATG 57.923 45.455 0.00 0.00 36.40 1.90
1737 2119 4.778213 TTGTCCAGCCAAGCTATCTAAT 57.222 40.909 0.00 0.00 36.40 1.73
1738 2120 4.568072 TTTGTCCAGCCAAGCTATCTAA 57.432 40.909 0.00 0.00 36.40 2.10
1767 2149 7.323420 TCCAATCTTTGTATCAGACTGTGTAG 58.677 38.462 1.59 0.00 0.00 2.74
1780 2162 3.838565 TGGCCAGTTTCCAATCTTTGTA 58.161 40.909 0.00 0.00 0.00 2.41
1802 2184 6.321821 TGTAGGTACCTATGAAATTTGGCT 57.678 37.500 24.36 0.00 0.00 4.75
1905 2287 6.166984 TCTTCAGAGACATCAAGTTTCAGT 57.833 37.500 0.00 0.00 33.94 3.41
1931 2313 6.681729 TTATGACCTTTCTCAGTTAGGTGT 57.318 37.500 5.36 0.00 42.21 4.16
1935 2317 7.044181 TGATGCTTATGACCTTTCTCAGTTAG 58.956 38.462 0.00 0.00 0.00 2.34
1939 2321 5.668471 TCTGATGCTTATGACCTTTCTCAG 58.332 41.667 0.00 0.00 0.00 3.35
1944 2326 4.225942 TCACCTCTGATGCTTATGACCTTT 59.774 41.667 0.00 0.00 0.00 3.11
2017 2400 0.460811 TGCAGCTAGTCAGAATGCGG 60.461 55.000 0.00 0.00 38.30 5.69
2019 2402 2.941064 TGAATGCAGCTAGTCAGAATGC 59.059 45.455 0.00 0.00 36.85 3.56
2025 2408 0.740868 GCCGTGAATGCAGCTAGTCA 60.741 55.000 0.00 0.00 0.00 3.41
2071 2455 2.413837 GACCGTGTAACAGATGCACTT 58.586 47.619 0.00 0.00 41.93 3.16
2072 2456 1.337823 GGACCGTGTAACAGATGCACT 60.338 52.381 0.00 0.00 41.93 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.