Multiple sequence alignment - TraesCS5D01G507400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G507400 chr5D 100.000 2663 0 0 1 2663 532715643 532712981 0.000000e+00 4918.0
1 TraesCS5D01G507400 chr4A 89.944 1780 107 31 369 2113 639072452 639074194 0.000000e+00 2230.0
2 TraesCS5D01G507400 chr4A 91.422 443 25 8 2229 2663 639182159 639182596 1.760000e-166 595.0
3 TraesCS5D01G507400 chr4A 86.142 267 29 4 112 376 639071948 639072208 5.610000e-72 281.0
4 TraesCS5D01G507400 chr4A 90.196 51 4 1 2112 2162 639163923 639163972 6.150000e-07 65.8
5 TraesCS5D01G507400 chr5B 92.674 1406 51 18 660 2031 672842170 672840783 0.000000e+00 1978.0
6 TraesCS5D01G507400 chr5B 86.792 265 28 5 112 376 672849049 672848792 3.350000e-74 289.0
7 TraesCS5D01G507400 chr5B 96.667 60 2 0 2604 2663 672840123 672840064 1.690000e-17 100.0
8 TraesCS5D01G507400 chr5B 97.619 42 1 0 2133 2174 672840506 672840465 3.680000e-09 73.1
9 TraesCS5D01G507400 chr2B 97.222 36 1 0 2038 2073 640086835 640086800 7.960000e-06 62.1
10 TraesCS5D01G507400 chr3A 100.000 28 0 0 2043 2070 455027126 455027153 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G507400 chr5D 532712981 532715643 2662 True 4918.000000 4918 100.000000 1 2663 1 chr5D.!!$R1 2662
1 TraesCS5D01G507400 chr4A 639071948 639074194 2246 False 1255.500000 2230 88.043000 112 2113 2 chr4A.!!$F3 2001
2 TraesCS5D01G507400 chr5B 672840064 672842170 2106 True 717.033333 1978 95.653333 660 2663 3 chr5B.!!$R2 2003

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
318 321 0.111446 TTGCGGGGTCTCCAAATCAA 59.889 50.0 0.0 0.0 34.36 2.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1985 2277 0.179192 GCATTTCGCACGAATGAGCA 60.179 50.0 6.28 0.0 41.79 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.383620 GAGACACCATGCCTATCTCTG 57.616 52.381 7.06 0.00 34.28 3.35
21 22 2.036992 GAGACACCATGCCTATCTCTGG 59.963 54.545 7.06 0.00 34.28 3.86
22 23 2.042464 GACACCATGCCTATCTCTGGA 58.958 52.381 0.00 0.00 32.92 3.86
23 24 2.435805 GACACCATGCCTATCTCTGGAA 59.564 50.000 0.00 0.00 32.92 3.53
24 25 3.051581 ACACCATGCCTATCTCTGGAAT 58.948 45.455 0.00 0.00 32.92 3.01
25 26 3.181447 ACACCATGCCTATCTCTGGAATG 60.181 47.826 0.00 0.00 39.73 2.67
26 27 2.224719 ACCATGCCTATCTCTGGAATGC 60.225 50.000 0.00 0.00 38.91 3.56
27 28 2.040012 CCATGCCTATCTCTGGAATGCT 59.960 50.000 0.00 0.00 38.91 3.79
28 29 3.498121 CCATGCCTATCTCTGGAATGCTT 60.498 47.826 0.00 0.00 38.91 3.91
29 30 4.263199 CCATGCCTATCTCTGGAATGCTTA 60.263 45.833 0.00 0.00 38.91 3.09
30 31 5.311265 CATGCCTATCTCTGGAATGCTTAA 58.689 41.667 0.00 0.00 34.19 1.85
31 32 5.573380 TGCCTATCTCTGGAATGCTTAAT 57.427 39.130 0.00 0.00 0.00 1.40
32 33 5.555017 TGCCTATCTCTGGAATGCTTAATC 58.445 41.667 0.00 0.00 0.00 1.75
33 34 4.940654 GCCTATCTCTGGAATGCTTAATCC 59.059 45.833 0.00 0.00 36.21 3.01
34 35 5.280419 GCCTATCTCTGGAATGCTTAATCCT 60.280 44.000 0.00 0.00 36.64 3.24
35 36 6.746614 GCCTATCTCTGGAATGCTTAATCCTT 60.747 42.308 0.00 0.00 36.64 3.36
36 37 6.654161 CCTATCTCTGGAATGCTTAATCCTTG 59.346 42.308 0.00 0.00 36.64 3.61
37 38 5.441718 TCTCTGGAATGCTTAATCCTTGT 57.558 39.130 0.00 0.00 36.64 3.16
38 39 5.819991 TCTCTGGAATGCTTAATCCTTGTT 58.180 37.500 0.00 0.00 36.64 2.83
39 40 6.248433 TCTCTGGAATGCTTAATCCTTGTTT 58.752 36.000 0.00 0.00 36.64 2.83
40 41 6.721208 TCTCTGGAATGCTTAATCCTTGTTTT 59.279 34.615 0.00 0.00 36.64 2.43
41 42 6.690530 TCTGGAATGCTTAATCCTTGTTTTG 58.309 36.000 0.00 0.00 36.64 2.44
42 43 6.267471 TCTGGAATGCTTAATCCTTGTTTTGT 59.733 34.615 0.00 0.00 36.64 2.83
43 44 6.454795 TGGAATGCTTAATCCTTGTTTTGTC 58.545 36.000 0.00 0.00 36.64 3.18
44 45 5.869344 GGAATGCTTAATCCTTGTTTTGTCC 59.131 40.000 0.00 0.00 32.75 4.02
45 46 6.295292 GGAATGCTTAATCCTTGTTTTGTCCT 60.295 38.462 0.00 0.00 32.75 3.85
46 47 5.705609 TGCTTAATCCTTGTTTTGTCCTC 57.294 39.130 0.00 0.00 0.00 3.71
47 48 5.136828 TGCTTAATCCTTGTTTTGTCCTCA 58.863 37.500 0.00 0.00 0.00 3.86
48 49 5.241506 TGCTTAATCCTTGTTTTGTCCTCAG 59.758 40.000 0.00 0.00 0.00 3.35
49 50 5.241728 GCTTAATCCTTGTTTTGTCCTCAGT 59.758 40.000 0.00 0.00 0.00 3.41
50 51 6.430000 GCTTAATCCTTGTTTTGTCCTCAGTA 59.570 38.462 0.00 0.00 0.00 2.74
51 52 7.040686 GCTTAATCCTTGTTTTGTCCTCAGTAA 60.041 37.037 0.00 0.00 0.00 2.24
52 53 6.635030 AATCCTTGTTTTGTCCTCAGTAAC 57.365 37.500 0.00 0.00 0.00 2.50
53 54 5.105567 TCCTTGTTTTGTCCTCAGTAACA 57.894 39.130 0.00 0.00 32.36 2.41
54 55 5.502079 TCCTTGTTTTGTCCTCAGTAACAA 58.498 37.500 0.00 0.00 37.46 2.83
55 56 5.946972 TCCTTGTTTTGTCCTCAGTAACAAA 59.053 36.000 0.00 0.00 42.07 2.83
56 57 6.033966 CCTTGTTTTGTCCTCAGTAACAAAC 58.966 40.000 2.82 0.00 43.11 2.93
57 58 6.349777 CCTTGTTTTGTCCTCAGTAACAAACA 60.350 38.462 2.82 0.00 43.11 2.83
58 59 6.576662 TGTTTTGTCCTCAGTAACAAACAA 57.423 33.333 2.82 0.00 43.11 2.83
59 60 6.982852 TGTTTTGTCCTCAGTAACAAACAAA 58.017 32.000 2.82 0.00 43.11 2.83
60 61 7.434492 TGTTTTGTCCTCAGTAACAAACAAAA 58.566 30.769 7.02 7.02 43.11 2.44
61 62 8.091449 TGTTTTGTCCTCAGTAACAAACAAAAT 58.909 29.630 12.58 0.00 43.95 1.82
62 63 8.931775 GTTTTGTCCTCAGTAACAAACAAAATT 58.068 29.630 12.58 0.00 43.95 1.82
63 64 9.495572 TTTTGTCCTCAGTAACAAACAAAATTT 57.504 25.926 7.02 0.00 43.11 1.82
93 94 8.514330 TGAATGTGGTTTTACTGAACTTAAGT 57.486 30.769 1.12 1.12 0.00 2.24
94 95 8.617809 TGAATGTGGTTTTACTGAACTTAAGTC 58.382 33.333 8.95 3.51 0.00 3.01
95 96 8.514330 AATGTGGTTTTACTGAACTTAAGTCA 57.486 30.769 8.95 7.92 0.00 3.41
96 97 7.548196 TGTGGTTTTACTGAACTTAAGTCAG 57.452 36.000 22.70 22.70 37.50 3.51
97 98 7.107542 TGTGGTTTTACTGAACTTAAGTCAGT 58.892 34.615 28.06 28.06 45.39 3.41
98 99 7.608761 TGTGGTTTTACTGAACTTAAGTCAGTT 59.391 33.333 29.18 19.67 41.36 3.16
99 100 7.908601 GTGGTTTTACTGAACTTAAGTCAGTTG 59.091 37.037 29.18 14.80 41.36 3.16
100 101 7.825270 TGGTTTTACTGAACTTAAGTCAGTTGA 59.175 33.333 29.18 20.96 41.36 3.18
101 102 8.336080 GGTTTTACTGAACTTAAGTCAGTTGAG 58.664 37.037 29.18 14.63 42.07 3.02
102 103 9.095065 GTTTTACTGAACTTAAGTCAGTTGAGA 57.905 33.333 29.18 17.57 39.60 3.27
103 104 9.832445 TTTTACTGAACTTAAGTCAGTTGAGAT 57.168 29.630 29.18 15.84 39.60 2.75
104 105 9.832445 TTTACTGAACTTAAGTCAGTTGAGATT 57.168 29.630 29.18 15.39 39.60 2.40
105 106 9.832445 TTACTGAACTTAAGTCAGTTGAGATTT 57.168 29.630 29.18 14.93 39.60 2.17
106 107 8.738645 ACTGAACTTAAGTCAGTTGAGATTTT 57.261 30.769 23.60 2.15 39.60 1.82
107 108 8.831550 ACTGAACTTAAGTCAGTTGAGATTTTC 58.168 33.333 23.60 10.08 39.60 2.29
108 109 8.964476 TGAACTTAAGTCAGTTGAGATTTTCT 57.036 30.769 8.95 0.00 37.11 2.52
109 110 9.396022 TGAACTTAAGTCAGTTGAGATTTTCTT 57.604 29.630 8.95 0.00 37.11 2.52
162 163 1.278127 ACGGGGTTCGATGTGAGATTT 59.722 47.619 0.00 0.00 42.43 2.17
165 166 2.678336 GGGGTTCGATGTGAGATTTGAC 59.322 50.000 0.00 0.00 0.00 3.18
172 173 2.010145 TGTGAGATTTGACGGCTAGC 57.990 50.000 6.04 6.04 0.00 3.42
184 185 1.895238 GGCTAGCACCACCGACTTA 59.105 57.895 18.24 0.00 0.00 2.24
191 192 3.547746 AGCACCACCGACTTAAGAAAAA 58.452 40.909 10.09 0.00 0.00 1.94
203 204 7.320560 CCGACTTAAGAAAAATTTCGACAACTC 59.679 37.037 10.09 0.00 41.92 3.01
204 205 7.849026 CGACTTAAGAAAAATTTCGACAACTCA 59.151 33.333 10.09 0.00 41.92 3.41
205 206 9.159470 GACTTAAGAAAAATTTCGACAACTCAG 57.841 33.333 10.09 0.00 41.92 3.35
222 223 3.193263 CTCAGATGAAGAATGTGACCCG 58.807 50.000 0.00 0.00 33.79 5.28
226 227 2.198827 TGAAGAATGTGACCCGCAAT 57.801 45.000 0.00 0.00 0.00 3.56
229 230 4.075682 TGAAGAATGTGACCCGCAATTTA 58.924 39.130 0.00 0.00 0.00 1.40
244 245 4.620609 CGCAATTTACTTGTTTGCATAGCA 59.379 37.500 7.53 0.00 44.58 3.49
246 247 5.445010 GCAATTTACTTGTTTGCATAGCAGC 60.445 40.000 2.25 0.00 43.95 5.25
247 248 5.649782 ATTTACTTGTTTGCATAGCAGCT 57.350 34.783 0.00 0.00 40.61 4.24
248 249 4.424061 TTACTTGTTTGCATAGCAGCTG 57.576 40.909 10.11 10.11 40.61 4.24
249 250 1.542915 ACTTGTTTGCATAGCAGCTGG 59.457 47.619 17.12 0.00 40.61 4.85
250 251 1.814394 CTTGTTTGCATAGCAGCTGGA 59.186 47.619 17.12 0.00 40.61 3.86
262 263 1.208052 GCAGCTGGAGTACATTGAGGA 59.792 52.381 17.12 0.00 0.00 3.71
265 266 1.471676 GCTGGAGTACATTGAGGACCG 60.472 57.143 0.00 0.00 0.00 4.79
266 267 1.825474 CTGGAGTACATTGAGGACCGT 59.175 52.381 0.00 0.00 0.00 4.83
268 269 3.021695 TGGAGTACATTGAGGACCGTAG 58.978 50.000 0.00 0.00 0.00 3.51
270 271 1.755380 AGTACATTGAGGACCGTAGCC 59.245 52.381 0.00 0.00 0.00 3.93
272 273 0.537188 ACATTGAGGACCGTAGCCAG 59.463 55.000 0.00 0.00 0.00 4.85
275 276 1.568504 TTGAGGACCGTAGCCAGAAT 58.431 50.000 0.00 0.00 0.00 2.40
279 280 0.831307 GGACCGTAGCCAGAATTCCT 59.169 55.000 0.65 0.00 0.00 3.36
306 309 1.079888 GCTCATTTGGTTTGCGGGG 60.080 57.895 0.00 0.00 0.00 5.73
308 311 0.243636 CTCATTTGGTTTGCGGGGTC 59.756 55.000 0.00 0.00 0.00 4.46
316 319 0.526211 GTTTGCGGGGTCTCCAAATC 59.474 55.000 0.00 0.00 31.93 2.17
318 321 0.111446 TTGCGGGGTCTCCAAATCAA 59.889 50.000 0.00 0.00 34.36 2.57
324 327 2.225267 GGGGTCTCCAAATCAAGGGAAA 60.225 50.000 0.00 0.00 35.00 3.13
384 638 6.408434 CCAATCCTTTAGAATTTTCCATGGGG 60.408 42.308 13.02 0.00 0.00 4.96
385 639 5.283876 TCCTTTAGAATTTTCCATGGGGT 57.716 39.130 13.02 0.00 34.93 4.95
386 640 5.269189 TCCTTTAGAATTTTCCATGGGGTC 58.731 41.667 13.02 2.57 34.93 4.46
387 641 5.016245 TCCTTTAGAATTTTCCATGGGGTCT 59.984 40.000 13.02 9.89 34.93 3.85
388 642 5.360999 CCTTTAGAATTTTCCATGGGGTCTC 59.639 44.000 13.02 2.89 34.93 3.36
389 643 5.528600 TTAGAATTTTCCATGGGGTCTCA 57.471 39.130 13.02 0.00 34.93 3.27
391 645 2.532250 ATTTTCCATGGGGTCTCACC 57.468 50.000 13.02 0.00 37.60 4.02
392 646 1.455822 TTTTCCATGGGGTCTCACCT 58.544 50.000 13.02 0.00 38.64 4.00
393 647 2.352561 TTTCCATGGGGTCTCACCTA 57.647 50.000 13.02 0.00 38.64 3.08
394 648 2.352561 TTCCATGGGGTCTCACCTAA 57.647 50.000 13.02 0.00 38.64 2.69
395 649 2.587060 TCCATGGGGTCTCACCTAAT 57.413 50.000 13.02 0.00 38.64 1.73
396 650 2.126882 TCCATGGGGTCTCACCTAATG 58.873 52.381 13.02 0.00 38.64 1.90
398 652 0.846693 ATGGGGTCTCACCTAATGCC 59.153 55.000 0.00 0.00 38.64 4.40
400 654 0.181350 GGGGTCTCACCTAATGCCAG 59.819 60.000 0.00 0.00 38.64 4.85
437 691 8.621532 AATTACGCCTATATGAACACAATCAT 57.378 30.769 0.00 0.00 42.52 2.45
442 696 7.931407 ACGCCTATATGAACACAATCATAAGAA 59.069 33.333 1.54 0.00 43.49 2.52
452 706 8.487313 AACACAATCATAAGAAATAGCGTACA 57.513 30.769 0.00 0.00 0.00 2.90
453 707 7.906160 ACACAATCATAAGAAATAGCGTACAC 58.094 34.615 0.00 0.00 0.00 2.90
454 708 7.011109 ACACAATCATAAGAAATAGCGTACACC 59.989 37.037 0.00 0.00 0.00 4.16
455 709 7.224753 CACAATCATAAGAAATAGCGTACACCT 59.775 37.037 0.00 0.00 0.00 4.00
456 710 8.418662 ACAATCATAAGAAATAGCGTACACCTA 58.581 33.333 0.00 0.00 0.00 3.08
457 711 9.256477 CAATCATAAGAAATAGCGTACACCTAA 57.744 33.333 0.00 0.00 0.00 2.69
458 712 9.998106 AATCATAAGAAATAGCGTACACCTAAT 57.002 29.630 0.00 0.00 0.00 1.73
459 713 8.812147 TCATAAGAAATAGCGTACACCTAATG 57.188 34.615 0.00 0.00 0.00 1.90
460 714 5.986004 AAGAAATAGCGTACACCTAATGC 57.014 39.130 0.00 0.00 0.00 3.56
461 715 4.377897 AGAAATAGCGTACACCTAATGCC 58.622 43.478 0.00 0.00 0.00 4.40
462 716 3.830744 AATAGCGTACACCTAATGCCA 57.169 42.857 0.00 0.00 0.00 4.92
463 717 2.882927 TAGCGTACACCTAATGCCAG 57.117 50.000 0.00 0.00 0.00 4.85
464 718 0.178068 AGCGTACACCTAATGCCAGG 59.822 55.000 0.00 0.00 41.87 4.45
465 719 0.177141 GCGTACACCTAATGCCAGGA 59.823 55.000 3.30 0.00 39.18 3.86
472 726 3.956199 ACACCTAATGCCAGGAATTCATG 59.044 43.478 13.10 13.10 39.18 3.07
481 735 3.670627 GCCAGGAATTCATGTGAAACGAC 60.671 47.826 18.05 0.00 42.39 4.34
497 751 6.633634 GTGAAACGACTGTCATAGTAGATAGC 59.366 42.308 8.73 0.00 40.53 2.97
499 753 3.747010 ACGACTGTCATAGTAGATAGCGG 59.253 47.826 8.73 0.00 40.53 5.52
500 754 3.125487 CGACTGTCATAGTAGATAGCGGG 59.875 52.174 8.73 0.00 40.53 6.13
534 788 6.101997 GGTTCAAAATCACATTGGAATCCTC 58.898 40.000 0.00 0.00 0.00 3.71
571 825 5.818678 ATATACACCGAATGAGCCCTAAA 57.181 39.130 0.00 0.00 0.00 1.85
576 830 2.093128 ACCGAATGAGCCCTAAAATCGT 60.093 45.455 0.00 0.00 0.00 3.73
578 832 3.194861 CGAATGAGCCCTAAAATCGTCA 58.805 45.455 0.00 0.00 0.00 4.35
612 866 0.730265 CAATTGCATTGCATGGTGCC 59.270 50.000 12.95 0.00 44.23 5.01
628 886 3.520862 CCATGCACGTCCATGCCC 61.521 66.667 14.22 0.00 45.50 5.36
641 900 3.607084 ATGCCCTCCTTTGGTGCCC 62.607 63.158 0.00 0.00 0.00 5.36
704 963 1.628447 CGCATGCACCAATTGGCAAC 61.628 55.000 24.79 14.08 44.20 4.17
730 989 1.816863 GAGCACAACAGGACTCCCGA 61.817 60.000 0.00 0.00 37.58 5.14
735 994 0.244994 CAACAGGACTCCCGAGACAG 59.755 60.000 0.00 0.00 37.58 3.51
794 1058 2.758327 TCGACCACTGATCCCCCG 60.758 66.667 0.00 0.00 0.00 5.73
795 1059 4.530857 CGACCACTGATCCCCCGC 62.531 72.222 0.00 0.00 0.00 6.13
875 1139 1.455849 CAAGAACCACTCCCTGGCA 59.544 57.895 0.00 0.00 45.32 4.92
938 1202 1.518056 CGCTCCAGCACACCACAAAT 61.518 55.000 0.00 0.00 42.21 2.32
970 1237 0.951040 CCGACAGAAACCACAGAGGC 60.951 60.000 0.00 0.00 43.14 4.70
1125 1398 2.034066 ACCACGTGCAATGAGGGG 59.966 61.111 10.91 4.42 37.97 4.79
1132 1405 2.830370 GCAATGAGGGGCCCTTCG 60.830 66.667 29.49 16.29 31.76 3.79
1248 1521 2.572284 GGGACGGTGGACTTCTCG 59.428 66.667 0.00 0.00 0.00 4.04
1508 1781 1.974875 CCTGCACCATCAGCTGCAA 60.975 57.895 9.47 0.00 42.74 4.08
1579 1852 5.218179 AGTTCCAGAAGATGATCAGGATCT 58.782 41.667 10.38 3.11 35.26 2.75
1731 2004 3.279434 GCTCAATAACGTGGGATTCCTT 58.721 45.455 2.01 0.00 0.00 3.36
1820 2111 4.285003 TCTTTTGGTACGGATCCTCTTCAA 59.715 41.667 10.75 6.76 0.00 2.69
1858 2149 8.247562 TCGTTAAATGTTGGGAATAAAATGGAG 58.752 33.333 0.00 0.00 0.00 3.86
1865 2156 6.953520 TGTTGGGAATAAAATGGAGTCTCATT 59.046 34.615 1.47 2.14 38.84 2.57
1866 2157 8.112822 TGTTGGGAATAAAATGGAGTCTCATTA 58.887 33.333 1.47 0.00 36.45 1.90
1896 2187 6.428465 TGGTTTAAATTTCGTATCTGCTCACA 59.572 34.615 0.00 0.00 0.00 3.58
1918 2209 4.630069 CAGGTACCAGTGCAAATGTAGTAC 59.370 45.833 15.94 0.00 31.73 2.73
1919 2210 4.285003 AGGTACCAGTGCAAATGTAGTACA 59.715 41.667 15.94 5.24 33.33 2.90
1927 2218 5.404366 AGTGCAAATGTAGTACAGTACGTTG 59.596 40.000 9.25 8.57 33.33 4.10
1943 2235 3.596214 ACGTTGGCTAATTCTCGAACAT 58.404 40.909 0.00 0.00 0.00 2.71
1944 2236 4.751060 ACGTTGGCTAATTCTCGAACATA 58.249 39.130 0.00 0.00 0.00 2.29
1976 2268 4.740268 GCACTTCAATGCATCTGAAATCA 58.260 39.130 18.51 4.39 45.39 2.57
1985 2277 5.907866 TGCATCTGAAATCATGAATGTGT 57.092 34.783 0.00 0.00 0.00 3.72
1986 2278 5.646606 TGCATCTGAAATCATGAATGTGTG 58.353 37.500 0.00 0.00 0.00 3.82
1992 2284 6.152154 TCTGAAATCATGAATGTGTGCTCATT 59.848 34.615 0.00 0.00 40.20 2.57
2027 2319 5.741964 GCACAAATTGATACTCCCTCCGATA 60.742 44.000 0.00 0.00 0.00 2.92
2031 2323 5.923733 ATTGATACTCCCTCCGATACATC 57.076 43.478 0.00 0.00 0.00 3.06
2034 2326 2.757894 ACTCCCTCCGATACATCTGT 57.242 50.000 0.00 0.00 0.00 3.41
2039 2331 5.069251 ACTCCCTCCGATACATCTGTTAAAG 59.931 44.000 0.00 0.00 0.00 1.85
2041 2333 4.442893 CCCTCCGATACATCTGTTAAAGCA 60.443 45.833 0.00 0.00 0.00 3.91
2043 2335 5.006746 CCTCCGATACATCTGTTAAAGCAAC 59.993 44.000 0.00 0.00 37.67 4.17
2054 2374 9.507280 CATCTGTTAAAGCAACAAGTAATATGG 57.493 33.333 0.00 0.00 46.37 2.74
2061 2381 8.579850 AAAGCAACAAGTAATATGGATCAGAA 57.420 30.769 0.00 0.00 0.00 3.02
2084 2404 8.211629 AGAAGGAGTACATAAACTTTGTGACTT 58.788 33.333 5.35 2.48 0.00 3.01
2130 2450 7.535258 GCACAAATCATGTTAAACTGACAGTAG 59.465 37.037 8.91 0.00 41.46 2.57
2131 2451 7.535258 CACAAATCATGTTAAACTGACAGTAGC 59.465 37.037 8.91 0.00 41.46 3.58
2163 2630 1.198713 TTCATGAGAGTCCAGCTCCC 58.801 55.000 0.00 0.00 45.21 4.30
2191 2982 6.183347 CAAGGAGAGGAATAAAATGGACTGT 58.817 40.000 0.00 0.00 0.00 3.55
2192 2983 6.394345 AGGAGAGGAATAAAATGGACTGTT 57.606 37.500 0.00 0.00 0.00 3.16
2193 2984 6.418946 AGGAGAGGAATAAAATGGACTGTTC 58.581 40.000 0.00 0.00 0.00 3.18
2194 2985 6.216456 AGGAGAGGAATAAAATGGACTGTTCT 59.784 38.462 0.00 0.00 0.00 3.01
2195 2986 6.887002 GGAGAGGAATAAAATGGACTGTTCTT 59.113 38.462 0.00 0.00 0.00 2.52
2196 2987 7.394641 GGAGAGGAATAAAATGGACTGTTCTTT 59.605 37.037 0.00 0.00 0.00 2.52
2197 2988 8.341892 AGAGGAATAAAATGGACTGTTCTTTC 57.658 34.615 0.00 0.00 0.00 2.62
2198 2989 8.166726 AGAGGAATAAAATGGACTGTTCTTTCT 58.833 33.333 0.00 0.00 0.00 2.52
2199 2990 8.712228 AGGAATAAAATGGACTGTTCTTTCTT 57.288 30.769 0.00 0.00 0.00 2.52
2200 2991 8.579863 AGGAATAAAATGGACTGTTCTTTCTTG 58.420 33.333 0.00 0.00 0.00 3.02
2201 2992 8.360390 GGAATAAAATGGACTGTTCTTTCTTGT 58.640 33.333 0.00 0.00 0.00 3.16
2202 2993 9.399403 GAATAAAATGGACTGTTCTTTCTTGTC 57.601 33.333 0.00 0.00 0.00 3.18
2203 2994 8.697507 ATAAAATGGACTGTTCTTTCTTGTCT 57.302 30.769 0.00 0.00 0.00 3.41
2204 2995 9.793259 ATAAAATGGACTGTTCTTTCTTGTCTA 57.207 29.630 0.00 0.00 0.00 2.59
2205 2996 7.497925 AAATGGACTGTTCTTTCTTGTCTAC 57.502 36.000 0.00 0.00 0.00 2.59
2206 2997 5.871396 TGGACTGTTCTTTCTTGTCTACT 57.129 39.130 0.00 0.00 0.00 2.57
2207 2998 5.844004 TGGACTGTTCTTTCTTGTCTACTC 58.156 41.667 0.00 0.00 0.00 2.59
2208 2999 5.362717 TGGACTGTTCTTTCTTGTCTACTCA 59.637 40.000 0.00 0.00 0.00 3.41
2209 3000 6.127168 TGGACTGTTCTTTCTTGTCTACTCAA 60.127 38.462 0.00 0.00 0.00 3.02
2210 3001 6.931840 GGACTGTTCTTTCTTGTCTACTCAAT 59.068 38.462 0.00 0.00 0.00 2.57
2211 3002 8.088981 GGACTGTTCTTTCTTGTCTACTCAATA 58.911 37.037 0.00 0.00 0.00 1.90
2212 3003 8.819643 ACTGTTCTTTCTTGTCTACTCAATAC 57.180 34.615 0.00 0.00 0.00 1.89
2213 3004 8.643324 ACTGTTCTTTCTTGTCTACTCAATACT 58.357 33.333 0.00 0.00 0.00 2.12
2214 3005 9.482627 CTGTTCTTTCTTGTCTACTCAATACTT 57.517 33.333 0.00 0.00 0.00 2.24
2237 3028 3.569194 TTTTTGCAGGGTGTCTACTCA 57.431 42.857 0.00 0.00 0.00 3.41
2238 3029 3.569194 TTTTGCAGGGTGTCTACTCAA 57.431 42.857 0.00 0.00 0.00 3.02
2239 3030 3.788227 TTTGCAGGGTGTCTACTCAAT 57.212 42.857 0.00 0.00 0.00 2.57
2240 3031 4.901197 TTTGCAGGGTGTCTACTCAATA 57.099 40.909 0.00 0.00 0.00 1.90
2241 3032 3.887621 TGCAGGGTGTCTACTCAATAC 57.112 47.619 0.00 0.00 0.00 1.89
2242 3033 3.441101 TGCAGGGTGTCTACTCAATACT 58.559 45.455 0.00 0.00 0.00 2.12
2243 3034 3.838317 TGCAGGGTGTCTACTCAATACTT 59.162 43.478 0.00 0.00 0.00 2.24
2244 3035 4.184629 GCAGGGTGTCTACTCAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2245 3036 4.322801 GCAGGGTGTCTACTCAATACTTGT 60.323 45.833 0.00 0.00 0.00 3.16
2246 3037 5.794894 CAGGGTGTCTACTCAATACTTGTT 58.205 41.667 0.00 0.00 0.00 2.83
2247 3038 5.639506 CAGGGTGTCTACTCAATACTTGTTG 59.360 44.000 0.00 0.00 0.00 3.33
2248 3039 5.307196 AGGGTGTCTACTCAATACTTGTTGT 59.693 40.000 0.00 0.00 0.00 3.32
2249 3040 5.408604 GGGTGTCTACTCAATACTTGTTGTG 59.591 44.000 0.00 0.00 0.00 3.33
2250 3041 5.408604 GGTGTCTACTCAATACTTGTTGTGG 59.591 44.000 0.00 0.00 0.00 4.17
2251 3042 4.994852 TGTCTACTCAATACTTGTTGTGGC 59.005 41.667 0.00 0.00 0.00 5.01
2252 3043 4.994852 GTCTACTCAATACTTGTTGTGGCA 59.005 41.667 0.00 0.00 0.00 4.92
2253 3044 4.994852 TCTACTCAATACTTGTTGTGGCAC 59.005 41.667 11.55 11.55 0.00 5.01
2254 3045 2.884639 ACTCAATACTTGTTGTGGCACC 59.115 45.455 16.26 0.43 0.00 5.01
2255 3046 2.228822 CTCAATACTTGTTGTGGCACCC 59.771 50.000 16.26 6.30 0.00 4.61
2256 3047 1.272212 CAATACTTGTTGTGGCACCCC 59.728 52.381 16.26 5.91 0.00 4.95
2257 3048 0.777446 ATACTTGTTGTGGCACCCCT 59.223 50.000 16.26 0.00 0.00 4.79
2258 3049 1.436326 TACTTGTTGTGGCACCCCTA 58.564 50.000 16.26 1.48 0.00 3.53
2259 3050 0.553819 ACTTGTTGTGGCACCCCTAA 59.446 50.000 16.26 0.00 0.00 2.69
2260 3051 1.063567 ACTTGTTGTGGCACCCCTAAA 60.064 47.619 16.26 0.00 0.00 1.85
2261 3052 2.035632 CTTGTTGTGGCACCCCTAAAA 58.964 47.619 16.26 0.00 0.00 1.52
2262 3053 2.160721 TGTTGTGGCACCCCTAAAAA 57.839 45.000 16.26 0.00 0.00 1.94
2282 3073 5.835113 AAAAACTTGTTCTAGCTTCTGCA 57.165 34.783 0.00 0.00 42.74 4.41
2283 3074 5.835113 AAAACTTGTTCTAGCTTCTGCAA 57.165 34.783 0.00 0.00 42.74 4.08
2284 3075 6.396829 AAAACTTGTTCTAGCTTCTGCAAT 57.603 33.333 0.00 0.00 42.74 3.56
2285 3076 5.619625 AACTTGTTCTAGCTTCTGCAATC 57.380 39.130 0.00 0.00 42.74 2.67
2286 3077 4.904241 ACTTGTTCTAGCTTCTGCAATCT 58.096 39.130 0.00 0.00 42.74 2.40
2287 3078 5.312079 ACTTGTTCTAGCTTCTGCAATCTT 58.688 37.500 0.00 0.00 42.74 2.40
2288 3079 5.411053 ACTTGTTCTAGCTTCTGCAATCTTC 59.589 40.000 0.00 0.00 42.74 2.87
2289 3080 3.928992 TGTTCTAGCTTCTGCAATCTTCG 59.071 43.478 0.00 0.00 42.74 3.79
2290 3081 3.876274 TCTAGCTTCTGCAATCTTCGT 57.124 42.857 0.00 0.00 42.74 3.85
2291 3082 4.983671 TCTAGCTTCTGCAATCTTCGTA 57.016 40.909 0.00 0.00 42.74 3.43
2292 3083 5.324784 TCTAGCTTCTGCAATCTTCGTAA 57.675 39.130 0.00 0.00 42.74 3.18
2293 3084 5.720202 TCTAGCTTCTGCAATCTTCGTAAA 58.280 37.500 0.00 0.00 42.74 2.01
2294 3085 6.341316 TCTAGCTTCTGCAATCTTCGTAAAT 58.659 36.000 0.00 0.00 42.74 1.40
2295 3086 7.489160 TCTAGCTTCTGCAATCTTCGTAAATA 58.511 34.615 0.00 0.00 42.74 1.40
2296 3087 6.985188 AGCTTCTGCAATCTTCGTAAATAA 57.015 33.333 0.00 0.00 42.74 1.40
2297 3088 7.377766 AGCTTCTGCAATCTTCGTAAATAAA 57.622 32.000 0.00 0.00 42.74 1.40
2298 3089 7.989826 AGCTTCTGCAATCTTCGTAAATAAAT 58.010 30.769 0.00 0.00 42.74 1.40
2299 3090 9.109393 AGCTTCTGCAATCTTCGTAAATAAATA 57.891 29.630 0.00 0.00 42.74 1.40
2300 3091 9.716507 GCTTCTGCAATCTTCGTAAATAAATAA 57.283 29.630 0.00 0.00 39.41 1.40
2303 3094 9.716507 TCTGCAATCTTCGTAAATAAATAAAGC 57.283 29.630 0.00 0.00 0.00 3.51
2304 3095 9.722056 CTGCAATCTTCGTAAATAAATAAAGCT 57.278 29.630 0.00 0.00 0.00 3.74
2320 3111 8.635765 AAATAAAGCTATGACTCAAAACCAGA 57.364 30.769 0.00 0.00 0.00 3.86
2321 3112 8.635765 AATAAAGCTATGACTCAAAACCAGAA 57.364 30.769 0.00 0.00 0.00 3.02
2322 3113 8.814038 ATAAAGCTATGACTCAAAACCAGAAT 57.186 30.769 0.00 0.00 0.00 2.40
2323 3114 6.749923 AAGCTATGACTCAAAACCAGAATC 57.250 37.500 0.00 0.00 0.00 2.52
2324 3115 6.059787 AGCTATGACTCAAAACCAGAATCT 57.940 37.500 0.00 0.00 0.00 2.40
2325 3116 5.879223 AGCTATGACTCAAAACCAGAATCTG 59.121 40.000 2.68 2.68 0.00 2.90
2336 3127 1.691434 CCAGAATCTGGTCCCTCTAGC 59.309 57.143 20.76 0.00 45.82 3.42
2337 3128 2.676748 CAGAATCTGGTCCCTCTAGCT 58.323 52.381 1.53 0.00 0.00 3.32
2338 3129 3.037549 CAGAATCTGGTCCCTCTAGCTT 58.962 50.000 1.53 0.00 0.00 3.74
2339 3130 3.454082 CAGAATCTGGTCCCTCTAGCTTT 59.546 47.826 1.53 0.00 0.00 3.51
2340 3131 3.709141 AGAATCTGGTCCCTCTAGCTTTC 59.291 47.826 0.00 0.00 0.00 2.62
2341 3132 1.475403 TCTGGTCCCTCTAGCTTTCG 58.525 55.000 0.00 0.00 0.00 3.46
2342 3133 0.461961 CTGGTCCCTCTAGCTTTCGG 59.538 60.000 0.00 0.00 0.00 4.30
2343 3134 0.252103 TGGTCCCTCTAGCTTTCGGT 60.252 55.000 0.00 0.00 0.00 4.69
2344 3135 0.903236 GGTCCCTCTAGCTTTCGGTT 59.097 55.000 0.00 0.00 0.00 4.44
2345 3136 1.134759 GGTCCCTCTAGCTTTCGGTTC 60.135 57.143 0.00 0.00 0.00 3.62
2346 3137 1.549170 GTCCCTCTAGCTTTCGGTTCA 59.451 52.381 0.00 0.00 0.00 3.18
2347 3138 2.168728 GTCCCTCTAGCTTTCGGTTCAT 59.831 50.000 0.00 0.00 0.00 2.57
2348 3139 2.168521 TCCCTCTAGCTTTCGGTTCATG 59.831 50.000 0.00 0.00 0.00 3.07
2349 3140 1.936547 CCTCTAGCTTTCGGTTCATGC 59.063 52.381 0.00 0.00 0.00 4.06
2350 3141 1.936547 CTCTAGCTTTCGGTTCATGCC 59.063 52.381 0.00 0.00 0.00 4.40
2351 3142 1.555075 TCTAGCTTTCGGTTCATGCCT 59.445 47.619 0.00 0.00 0.00 4.75
2352 3143 2.027192 TCTAGCTTTCGGTTCATGCCTT 60.027 45.455 0.00 0.00 0.00 4.35
2353 3144 0.883833 AGCTTTCGGTTCATGCCTTG 59.116 50.000 0.00 0.00 0.00 3.61
2354 3145 0.881118 GCTTTCGGTTCATGCCTTGA 59.119 50.000 0.00 0.00 0.00 3.02
2355 3146 1.401539 GCTTTCGGTTCATGCCTTGAC 60.402 52.381 0.00 0.00 32.84 3.18
2356 3147 2.154462 CTTTCGGTTCATGCCTTGACT 58.846 47.619 0.00 0.00 32.84 3.41
2357 3148 2.270352 TTCGGTTCATGCCTTGACTT 57.730 45.000 0.00 0.00 32.84 3.01
2358 3149 1.808411 TCGGTTCATGCCTTGACTTC 58.192 50.000 0.00 0.00 32.84 3.01
2359 3150 0.804989 CGGTTCATGCCTTGACTTCC 59.195 55.000 0.00 0.00 32.84 3.46
2360 3151 1.611673 CGGTTCATGCCTTGACTTCCT 60.612 52.381 0.00 0.00 32.84 3.36
2361 3152 2.519013 GGTTCATGCCTTGACTTCCTT 58.481 47.619 0.00 0.00 32.84 3.36
2362 3153 2.229784 GGTTCATGCCTTGACTTCCTTG 59.770 50.000 0.00 0.00 32.84 3.61
2363 3154 2.887152 GTTCATGCCTTGACTTCCTTGT 59.113 45.455 0.00 0.00 32.84 3.16
2364 3155 2.507484 TCATGCCTTGACTTCCTTGTG 58.493 47.619 0.00 0.00 0.00 3.33
2365 3156 2.106338 TCATGCCTTGACTTCCTTGTGA 59.894 45.455 0.00 0.00 0.00 3.58
2366 3157 2.957402 TGCCTTGACTTCCTTGTGAT 57.043 45.000 0.00 0.00 0.00 3.06
2367 3158 3.228188 TGCCTTGACTTCCTTGTGATT 57.772 42.857 0.00 0.00 0.00 2.57
2368 3159 3.149196 TGCCTTGACTTCCTTGTGATTC 58.851 45.455 0.00 0.00 0.00 2.52
2369 3160 3.149196 GCCTTGACTTCCTTGTGATTCA 58.851 45.455 0.00 0.00 0.00 2.57
2370 3161 3.569701 GCCTTGACTTCCTTGTGATTCAA 59.430 43.478 0.00 0.00 34.61 2.69
2371 3162 4.219288 GCCTTGACTTCCTTGTGATTCAAT 59.781 41.667 0.00 0.00 35.35 2.57
2372 3163 5.415701 GCCTTGACTTCCTTGTGATTCAATA 59.584 40.000 0.00 0.00 35.35 1.90
2373 3164 6.096001 GCCTTGACTTCCTTGTGATTCAATAT 59.904 38.462 0.00 0.00 35.35 1.28
2374 3165 7.478322 CCTTGACTTCCTTGTGATTCAATATG 58.522 38.462 0.00 0.00 35.35 1.78
2375 3166 7.121759 CCTTGACTTCCTTGTGATTCAATATGT 59.878 37.037 0.00 0.00 35.35 2.29
2376 3167 7.381766 TGACTTCCTTGTGATTCAATATGTG 57.618 36.000 0.00 0.00 35.35 3.21
2377 3168 7.167535 TGACTTCCTTGTGATTCAATATGTGA 58.832 34.615 0.00 0.00 35.35 3.58
2398 3189 6.831769 GTGAAAGACACGATTATTGTGATGT 58.168 36.000 18.49 2.78 39.73 3.06
2399 3190 6.955963 GTGAAAGACACGATTATTGTGATGTC 59.044 38.462 18.49 11.25 39.73 3.06
2400 3191 6.873605 TGAAAGACACGATTATTGTGATGTCT 59.126 34.615 18.49 8.62 46.60 3.41
2401 3192 6.653273 AAGACACGATTATTGTGATGTCTG 57.347 37.500 18.49 0.00 44.51 3.51
2402 3193 4.568359 AGACACGATTATTGTGATGTCTGC 59.432 41.667 18.49 0.67 43.82 4.26
2403 3194 4.507710 ACACGATTATTGTGATGTCTGCT 58.492 39.130 18.49 0.00 39.73 4.24
2404 3195 4.330894 ACACGATTATTGTGATGTCTGCTG 59.669 41.667 18.49 0.00 39.73 4.41
2405 3196 3.310774 ACGATTATTGTGATGTCTGCTGC 59.689 43.478 0.00 0.00 0.00 5.25
2406 3197 3.303593 CGATTATTGTGATGTCTGCTGCC 60.304 47.826 0.00 0.00 0.00 4.85
2407 3198 2.042686 TATTGTGATGTCTGCTGCCC 57.957 50.000 0.00 0.00 0.00 5.36
2408 3199 1.028330 ATTGTGATGTCTGCTGCCCG 61.028 55.000 0.00 0.00 0.00 6.13
2409 3200 2.046892 GTGATGTCTGCTGCCCGT 60.047 61.111 0.00 0.00 0.00 5.28
2410 3201 2.046988 TGATGTCTGCTGCCCGTG 60.047 61.111 0.00 0.00 0.00 4.94
2411 3202 2.046892 GATGTCTGCTGCCCGTGT 60.047 61.111 0.00 0.00 0.00 4.49
2412 3203 2.359107 ATGTCTGCTGCCCGTGTG 60.359 61.111 0.00 0.00 0.00 3.82
2413 3204 3.182590 ATGTCTGCTGCCCGTGTGT 62.183 57.895 0.00 0.00 0.00 3.72
2414 3205 3.349006 GTCTGCTGCCCGTGTGTG 61.349 66.667 0.00 0.00 0.00 3.82
2415 3206 3.545574 TCTGCTGCCCGTGTGTGA 61.546 61.111 0.00 0.00 0.00 3.58
2416 3207 2.591429 CTGCTGCCCGTGTGTGAA 60.591 61.111 0.00 0.00 0.00 3.18
2417 3208 2.896801 CTGCTGCCCGTGTGTGAAC 61.897 63.158 0.00 0.00 0.00 3.18
2418 3209 2.899838 GCTGCCCGTGTGTGAACA 60.900 61.111 0.00 0.00 0.00 3.18
2419 3210 2.477176 GCTGCCCGTGTGTGAACAA 61.477 57.895 0.00 0.00 0.00 2.83
2420 3211 1.355210 CTGCCCGTGTGTGAACAAC 59.645 57.895 0.00 0.00 0.00 3.32
2421 3212 1.372838 CTGCCCGTGTGTGAACAACA 61.373 55.000 0.00 0.00 36.04 3.33
2422 3213 0.960861 TGCCCGTGTGTGAACAACAA 60.961 50.000 0.00 0.00 41.57 2.83
2423 3214 0.248458 GCCCGTGTGTGAACAACAAG 60.248 55.000 0.00 0.00 41.57 3.16
2424 3215 1.091537 CCCGTGTGTGAACAACAAGT 58.908 50.000 0.00 0.00 41.57 3.16
2425 3216 1.470890 CCCGTGTGTGAACAACAAGTT 59.529 47.619 0.00 0.00 41.57 2.66
2426 3217 2.514902 CCGTGTGTGAACAACAAGTTG 58.485 47.619 11.16 11.16 41.57 3.16
2461 3252 4.966965 TTTTTGCGGAAAGTGTGAGTAA 57.033 36.364 1.41 0.00 0.00 2.24
2462 3253 3.955771 TTTGCGGAAAGTGTGAGTAAC 57.044 42.857 0.00 0.00 0.00 2.50
2463 3254 2.605837 TGCGGAAAGTGTGAGTAACA 57.394 45.000 0.00 0.00 36.04 2.41
2464 3255 2.907634 TGCGGAAAGTGTGAGTAACAA 58.092 42.857 0.00 0.00 41.57 2.83
2465 3256 2.869801 TGCGGAAAGTGTGAGTAACAAG 59.130 45.455 0.00 0.00 41.57 3.16
2466 3257 2.870411 GCGGAAAGTGTGAGTAACAAGT 59.130 45.455 0.00 0.00 41.57 3.16
2467 3258 3.303132 GCGGAAAGTGTGAGTAACAAGTG 60.303 47.826 0.00 0.00 41.57 3.16
2468 3259 4.116961 CGGAAAGTGTGAGTAACAAGTGA 58.883 43.478 0.00 0.00 41.57 3.41
2469 3260 4.209288 CGGAAAGTGTGAGTAACAAGTGAG 59.791 45.833 0.00 0.00 41.57 3.51
2470 3261 5.116882 GGAAAGTGTGAGTAACAAGTGAGT 58.883 41.667 0.00 0.00 41.57 3.41
2471 3262 5.234543 GGAAAGTGTGAGTAACAAGTGAGTC 59.765 44.000 0.00 0.00 41.57 3.36
2472 3263 5.339008 AAGTGTGAGTAACAAGTGAGTCA 57.661 39.130 0.00 0.00 41.57 3.41
2473 3264 4.683832 AGTGTGAGTAACAAGTGAGTCAC 58.316 43.478 15.78 15.78 41.57 3.67
2474 3265 3.802685 GTGTGAGTAACAAGTGAGTCACC 59.197 47.826 19.71 3.30 41.57 4.02
2475 3266 3.704566 TGTGAGTAACAAGTGAGTCACCT 59.295 43.478 19.71 8.34 35.24 4.00
2476 3267 4.891168 TGTGAGTAACAAGTGAGTCACCTA 59.109 41.667 19.71 4.02 35.24 3.08
2477 3268 5.361571 TGTGAGTAACAAGTGAGTCACCTAA 59.638 40.000 19.71 0.00 35.24 2.69
2478 3269 6.127281 TGTGAGTAACAAGTGAGTCACCTAAA 60.127 38.462 19.71 0.00 35.24 1.85
2479 3270 6.759827 GTGAGTAACAAGTGAGTCACCTAAAA 59.240 38.462 19.71 0.48 34.49 1.52
2480 3271 7.279313 GTGAGTAACAAGTGAGTCACCTAAAAA 59.721 37.037 19.71 0.00 34.49 1.94
2481 3272 7.494625 TGAGTAACAAGTGAGTCACCTAAAAAG 59.505 37.037 19.71 4.90 34.49 2.27
2482 3273 7.336396 AGTAACAAGTGAGTCACCTAAAAAGT 58.664 34.615 19.71 5.49 34.49 2.66
2483 3274 8.480501 AGTAACAAGTGAGTCACCTAAAAAGTA 58.519 33.333 19.71 0.00 34.49 2.24
2484 3275 9.269453 GTAACAAGTGAGTCACCTAAAAAGTAT 57.731 33.333 19.71 0.00 34.49 2.12
2485 3276 8.747538 AACAAGTGAGTCACCTAAAAAGTATT 57.252 30.769 19.71 0.58 34.49 1.89
2486 3277 8.379457 ACAAGTGAGTCACCTAAAAAGTATTC 57.621 34.615 19.71 0.00 34.49 1.75
2487 3278 7.990886 ACAAGTGAGTCACCTAAAAAGTATTCA 59.009 33.333 19.71 0.00 34.49 2.57
2488 3279 8.836413 CAAGTGAGTCACCTAAAAAGTATTCAA 58.164 33.333 19.71 0.00 34.49 2.69
2489 3280 8.974060 AGTGAGTCACCTAAAAAGTATTCAAA 57.026 30.769 19.71 0.00 34.49 2.69
2490 3281 9.574516 AGTGAGTCACCTAAAAAGTATTCAAAT 57.425 29.630 19.71 0.00 34.49 2.32
2510 3301 9.709495 TTCAAATTGATTATCTTTTTCCACCTG 57.291 29.630 0.00 0.00 0.00 4.00
2511 3302 8.313292 TCAAATTGATTATCTTTTTCCACCTGG 58.687 33.333 0.00 0.00 0.00 4.45
2512 3303 5.659440 TTGATTATCTTTTTCCACCTGGC 57.341 39.130 0.00 0.00 34.44 4.85
2513 3304 4.934356 TGATTATCTTTTTCCACCTGGCT 58.066 39.130 0.00 0.00 34.44 4.75
2514 3305 6.073447 TGATTATCTTTTTCCACCTGGCTA 57.927 37.500 0.00 0.00 34.44 3.93
2515 3306 6.672593 TGATTATCTTTTTCCACCTGGCTAT 58.327 36.000 0.00 0.00 34.44 2.97
2516 3307 7.811282 TGATTATCTTTTTCCACCTGGCTATA 58.189 34.615 0.00 0.00 34.44 1.31
2517 3308 8.278639 TGATTATCTTTTTCCACCTGGCTATAA 58.721 33.333 0.00 0.00 34.44 0.98
2518 3309 8.697507 ATTATCTTTTTCCACCTGGCTATAAG 57.302 34.615 0.00 0.00 34.44 1.73
2519 3310 5.514500 TCTTTTTCCACCTGGCTATAAGT 57.486 39.130 0.00 0.00 34.44 2.24
2520 3311 5.497474 TCTTTTTCCACCTGGCTATAAGTC 58.503 41.667 0.00 0.00 34.44 3.01
2521 3312 4.919774 TTTTCCACCTGGCTATAAGTCA 57.080 40.909 0.00 0.00 34.44 3.41
2522 3313 4.919774 TTTCCACCTGGCTATAAGTCAA 57.080 40.909 0.00 0.00 34.44 3.18
2523 3314 3.906720 TCCACCTGGCTATAAGTCAAC 57.093 47.619 0.00 0.00 34.44 3.18
2524 3315 3.450904 TCCACCTGGCTATAAGTCAACT 58.549 45.455 0.00 0.00 34.44 3.16
2525 3316 3.844211 TCCACCTGGCTATAAGTCAACTT 59.156 43.478 0.46 0.46 36.16 2.66
2526 3317 4.288626 TCCACCTGGCTATAAGTCAACTTT 59.711 41.667 0.00 0.00 34.76 2.66
2527 3318 4.636206 CCACCTGGCTATAAGTCAACTTTC 59.364 45.833 0.00 0.00 37.40 2.62
2528 3319 5.245531 CACCTGGCTATAAGTCAACTTTCA 58.754 41.667 0.00 0.00 37.40 2.69
2529 3320 5.705441 CACCTGGCTATAAGTCAACTTTCAA 59.295 40.000 0.00 0.00 37.40 2.69
2530 3321 6.206634 CACCTGGCTATAAGTCAACTTTCAAA 59.793 38.462 0.00 0.00 37.40 2.69
2531 3322 6.775629 ACCTGGCTATAAGTCAACTTTCAAAA 59.224 34.615 0.00 0.00 37.40 2.44
2532 3323 7.286775 ACCTGGCTATAAGTCAACTTTCAAAAA 59.713 33.333 0.00 0.00 37.40 1.94
2533 3324 8.306761 CCTGGCTATAAGTCAACTTTCAAAAAT 58.693 33.333 0.00 0.00 37.40 1.82
2534 3325 9.346725 CTGGCTATAAGTCAACTTTCAAAAATC 57.653 33.333 0.00 0.00 37.40 2.17
2535 3326 9.077885 TGGCTATAAGTCAACTTTCAAAAATCT 57.922 29.630 0.00 0.00 37.40 2.40
2536 3327 9.914131 GGCTATAAGTCAACTTTCAAAAATCTT 57.086 29.630 0.00 0.00 37.40 2.40
2542 3333 9.710900 AAGTCAACTTTCAAAAATCTTTCTTGT 57.289 25.926 0.00 0.00 30.82 3.16
2543 3334 9.710900 AGTCAACTTTCAAAAATCTTTCTTGTT 57.289 25.926 0.00 0.00 0.00 2.83
2544 3335 9.745323 GTCAACTTTCAAAAATCTTTCTTGTTG 57.255 29.630 0.00 0.00 33.50 3.33
2545 3336 8.442384 TCAACTTTCAAAAATCTTTCTTGTTGC 58.558 29.630 0.00 0.00 32.63 4.17
2546 3337 7.903995 ACTTTCAAAAATCTTTCTTGTTGCA 57.096 28.000 0.00 0.00 0.00 4.08
2547 3338 7.742151 ACTTTCAAAAATCTTTCTTGTTGCAC 58.258 30.769 0.00 0.00 0.00 4.57
2548 3339 6.660887 TTCAAAAATCTTTCTTGTTGCACC 57.339 33.333 0.00 0.00 0.00 5.01
2549 3340 5.976458 TCAAAAATCTTTCTTGTTGCACCT 58.024 33.333 0.00 0.00 0.00 4.00
2550 3341 6.042143 TCAAAAATCTTTCTTGTTGCACCTC 58.958 36.000 0.00 0.00 0.00 3.85
2551 3342 5.596836 AAAATCTTTCTTGTTGCACCTCA 57.403 34.783 0.00 0.00 0.00 3.86
2552 3343 5.796424 AAATCTTTCTTGTTGCACCTCAT 57.204 34.783 0.00 0.00 0.00 2.90
2553 3344 5.796424 AATCTTTCTTGTTGCACCTCATT 57.204 34.783 0.00 0.00 0.00 2.57
2554 3345 4.572985 TCTTTCTTGTTGCACCTCATTG 57.427 40.909 0.00 0.00 0.00 2.82
2555 3346 3.953612 TCTTTCTTGTTGCACCTCATTGT 59.046 39.130 0.00 0.00 0.00 2.71
2556 3347 3.988379 TTCTTGTTGCACCTCATTGTC 57.012 42.857 0.00 0.00 0.00 3.18
2557 3348 3.213206 TCTTGTTGCACCTCATTGTCT 57.787 42.857 0.00 0.00 0.00 3.41
2558 3349 3.141398 TCTTGTTGCACCTCATTGTCTC 58.859 45.455 0.00 0.00 0.00 3.36
2559 3350 2.936919 TGTTGCACCTCATTGTCTCT 57.063 45.000 0.00 0.00 0.00 3.10
2560 3351 2.771089 TGTTGCACCTCATTGTCTCTC 58.229 47.619 0.00 0.00 0.00 3.20
2561 3352 2.079925 GTTGCACCTCATTGTCTCTCC 58.920 52.381 0.00 0.00 0.00 3.71
2562 3353 1.351076 TGCACCTCATTGTCTCTCCA 58.649 50.000 0.00 0.00 0.00 3.86
2563 3354 1.277273 TGCACCTCATTGTCTCTCCAG 59.723 52.381 0.00 0.00 0.00 3.86
2564 3355 1.552337 GCACCTCATTGTCTCTCCAGA 59.448 52.381 0.00 0.00 0.00 3.86
2565 3356 2.027745 GCACCTCATTGTCTCTCCAGAA 60.028 50.000 0.00 0.00 0.00 3.02
2566 3357 3.557898 GCACCTCATTGTCTCTCCAGAAA 60.558 47.826 0.00 0.00 0.00 2.52
2567 3358 4.252073 CACCTCATTGTCTCTCCAGAAAG 58.748 47.826 0.00 0.00 0.00 2.62
2568 3359 4.020751 CACCTCATTGTCTCTCCAGAAAGA 60.021 45.833 0.00 0.00 0.00 2.52
2569 3360 4.222588 ACCTCATTGTCTCTCCAGAAAGAG 59.777 45.833 0.00 0.00 43.50 2.85
2570 3361 4.222588 CCTCATTGTCTCTCCAGAAAGAGT 59.777 45.833 1.21 0.00 42.82 3.24
2571 3362 5.279910 CCTCATTGTCTCTCCAGAAAGAGTT 60.280 44.000 1.21 0.00 42.82 3.01
2572 3363 5.788450 TCATTGTCTCTCCAGAAAGAGTTC 58.212 41.667 1.21 0.00 42.82 3.01
2573 3364 5.305386 TCATTGTCTCTCCAGAAAGAGTTCA 59.695 40.000 1.21 0.74 42.82 3.18
2574 3365 5.614324 TTGTCTCTCCAGAAAGAGTTCAA 57.386 39.130 1.21 5.80 42.82 2.69
2575 3366 5.207110 TGTCTCTCCAGAAAGAGTTCAAG 57.793 43.478 1.21 0.00 42.82 3.02
2576 3367 3.993736 GTCTCTCCAGAAAGAGTTCAAGC 59.006 47.826 1.21 0.00 42.82 4.01
2577 3368 3.007398 TCTCTCCAGAAAGAGTTCAAGCC 59.993 47.826 1.21 0.00 42.82 4.35
2578 3369 2.039084 TCTCCAGAAAGAGTTCAAGCCC 59.961 50.000 0.00 0.00 36.09 5.19
2579 3370 1.774254 TCCAGAAAGAGTTCAAGCCCA 59.226 47.619 0.00 0.00 36.09 5.36
2580 3371 2.174639 TCCAGAAAGAGTTCAAGCCCAA 59.825 45.455 0.00 0.00 36.09 4.12
2581 3372 2.958355 CCAGAAAGAGTTCAAGCCCAAA 59.042 45.455 0.00 0.00 36.09 3.28
2582 3373 3.384467 CCAGAAAGAGTTCAAGCCCAAAA 59.616 43.478 0.00 0.00 36.09 2.44
2583 3374 4.363138 CAGAAAGAGTTCAAGCCCAAAAC 58.637 43.478 0.00 0.00 36.09 2.43
2584 3375 3.384789 AGAAAGAGTTCAAGCCCAAAACC 59.615 43.478 0.00 0.00 36.09 3.27
2585 3376 1.704641 AGAGTTCAAGCCCAAAACCC 58.295 50.000 0.00 0.00 0.00 4.11
2586 3377 1.217942 AGAGTTCAAGCCCAAAACCCT 59.782 47.619 0.00 0.00 0.00 4.34
2587 3378 2.445525 AGAGTTCAAGCCCAAAACCCTA 59.554 45.455 0.00 0.00 0.00 3.53
2588 3379 3.117284 AGAGTTCAAGCCCAAAACCCTAA 60.117 43.478 0.00 0.00 0.00 2.69
2589 3380 3.832490 GAGTTCAAGCCCAAAACCCTAAT 59.168 43.478 0.00 0.00 0.00 1.73
2590 3381 3.578282 AGTTCAAGCCCAAAACCCTAATG 59.422 43.478 0.00 0.00 0.00 1.90
2591 3382 1.899142 TCAAGCCCAAAACCCTAATGC 59.101 47.619 0.00 0.00 0.00 3.56
2592 3383 1.622811 CAAGCCCAAAACCCTAATGCA 59.377 47.619 0.00 0.00 0.00 3.96
2593 3384 1.266178 AGCCCAAAACCCTAATGCAC 58.734 50.000 0.00 0.00 0.00 4.57
2594 3385 0.972883 GCCCAAAACCCTAATGCACA 59.027 50.000 0.00 0.00 0.00 4.57
2595 3386 1.337728 GCCCAAAACCCTAATGCACAC 60.338 52.381 0.00 0.00 0.00 3.82
2596 3387 2.247358 CCCAAAACCCTAATGCACACT 58.753 47.619 0.00 0.00 0.00 3.55
2597 3388 2.632512 CCCAAAACCCTAATGCACACTT 59.367 45.455 0.00 0.00 0.00 3.16
2598 3389 3.554752 CCCAAAACCCTAATGCACACTTG 60.555 47.826 0.00 0.00 0.00 3.16
2641 3432 0.250338 GGCGCCCAATAAGTAGAGGG 60.250 60.000 18.11 0.00 44.37 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.036992 CCAGAGATAGGCATGGTGTCTC 59.963 54.545 0.00 0.00 32.64 3.36
1 2 2.045524 CCAGAGATAGGCATGGTGTCT 58.954 52.381 0.00 0.00 35.80 3.41
2 3 2.042464 TCCAGAGATAGGCATGGTGTC 58.958 52.381 0.00 0.00 34.32 3.67
3 4 2.180946 TCCAGAGATAGGCATGGTGT 57.819 50.000 0.00 0.00 34.32 4.16
4 5 3.409570 CATTCCAGAGATAGGCATGGTG 58.590 50.000 0.00 0.00 34.32 4.17
5 6 2.224719 GCATTCCAGAGATAGGCATGGT 60.225 50.000 0.00 0.00 31.55 3.55
6 7 2.040012 AGCATTCCAGAGATAGGCATGG 59.960 50.000 0.00 0.00 31.55 3.66
7 8 3.420300 AGCATTCCAGAGATAGGCATG 57.580 47.619 0.00 0.00 33.63 4.06
8 9 5.573380 TTAAGCATTCCAGAGATAGGCAT 57.427 39.130 0.00 0.00 0.00 4.40
9 10 5.513788 GGATTAAGCATTCCAGAGATAGGCA 60.514 44.000 0.00 0.00 31.99 4.75
10 11 4.940654 GGATTAAGCATTCCAGAGATAGGC 59.059 45.833 0.00 0.00 31.99 3.93
11 12 6.371595 AGGATTAAGCATTCCAGAGATAGG 57.628 41.667 0.00 0.00 34.27 2.57
12 13 7.222872 ACAAGGATTAAGCATTCCAGAGATAG 58.777 38.462 0.00 0.00 34.27 2.08
13 14 7.141758 ACAAGGATTAAGCATTCCAGAGATA 57.858 36.000 0.00 0.00 34.27 1.98
14 15 6.011122 ACAAGGATTAAGCATTCCAGAGAT 57.989 37.500 0.00 0.00 34.27 2.75
15 16 5.441718 ACAAGGATTAAGCATTCCAGAGA 57.558 39.130 0.00 0.00 34.27 3.10
16 17 6.521151 AAACAAGGATTAAGCATTCCAGAG 57.479 37.500 0.00 0.00 34.27 3.35
17 18 6.267471 ACAAAACAAGGATTAAGCATTCCAGA 59.733 34.615 0.00 0.00 34.27 3.86
18 19 6.458210 ACAAAACAAGGATTAAGCATTCCAG 58.542 36.000 0.00 0.00 34.27 3.86
19 20 6.418057 ACAAAACAAGGATTAAGCATTCCA 57.582 33.333 0.00 0.00 34.27 3.53
20 21 5.869344 GGACAAAACAAGGATTAAGCATTCC 59.131 40.000 0.00 0.00 0.00 3.01
21 22 6.691508 AGGACAAAACAAGGATTAAGCATTC 58.308 36.000 0.00 0.00 0.00 2.67
22 23 6.267471 TGAGGACAAAACAAGGATTAAGCATT 59.733 34.615 0.00 0.00 0.00 3.56
23 24 5.774690 TGAGGACAAAACAAGGATTAAGCAT 59.225 36.000 0.00 0.00 0.00 3.79
24 25 5.136828 TGAGGACAAAACAAGGATTAAGCA 58.863 37.500 0.00 0.00 0.00 3.91
25 26 5.241728 ACTGAGGACAAAACAAGGATTAAGC 59.758 40.000 0.00 0.00 0.00 3.09
26 27 6.884280 ACTGAGGACAAAACAAGGATTAAG 57.116 37.500 0.00 0.00 0.00 1.85
27 28 7.776030 TGTTACTGAGGACAAAACAAGGATTAA 59.224 33.333 0.00 0.00 32.69 1.40
28 29 7.284074 TGTTACTGAGGACAAAACAAGGATTA 58.716 34.615 0.00 0.00 32.69 1.75
29 30 6.126409 TGTTACTGAGGACAAAACAAGGATT 58.874 36.000 0.00 0.00 32.69 3.01
30 31 5.690865 TGTTACTGAGGACAAAACAAGGAT 58.309 37.500 0.00 0.00 32.69 3.24
31 32 5.105567 TGTTACTGAGGACAAAACAAGGA 57.894 39.130 0.00 0.00 32.69 3.36
32 33 5.828299 TTGTTACTGAGGACAAAACAAGG 57.172 39.130 1.91 0.00 37.20 3.61
33 34 6.616947 TGTTTGTTACTGAGGACAAAACAAG 58.383 36.000 14.88 0.00 44.53 3.16
34 35 6.576662 TGTTTGTTACTGAGGACAAAACAA 57.423 33.333 14.88 6.60 44.53 2.83
35 36 6.576662 TTGTTTGTTACTGAGGACAAAACA 57.423 33.333 14.88 8.46 44.53 2.83
36 37 7.876896 TTTTGTTTGTTACTGAGGACAAAAC 57.123 32.000 14.88 6.30 44.53 2.43
37 38 9.495572 AAATTTTGTTTGTTACTGAGGACAAAA 57.504 25.926 14.88 12.67 44.53 2.44
67 68 9.131791 ACTTAAGTTCAGTAAAACCACATTCAT 57.868 29.630 1.12 0.00 0.00 2.57
68 69 8.514330 ACTTAAGTTCAGTAAAACCACATTCA 57.486 30.769 1.12 0.00 0.00 2.57
69 70 8.617809 TGACTTAAGTTCAGTAAAACCACATTC 58.382 33.333 10.02 0.00 0.00 2.67
70 71 8.514330 TGACTTAAGTTCAGTAAAACCACATT 57.486 30.769 10.02 0.00 0.00 2.71
71 72 7.773690 ACTGACTTAAGTTCAGTAAAACCACAT 59.226 33.333 25.94 8.91 42.20 3.21
72 73 7.107542 ACTGACTTAAGTTCAGTAAAACCACA 58.892 34.615 25.94 10.25 42.20 4.17
73 74 7.549615 ACTGACTTAAGTTCAGTAAAACCAC 57.450 36.000 25.94 6.93 42.20 4.16
74 75 7.825270 TCAACTGACTTAAGTTCAGTAAAACCA 59.175 33.333 26.71 11.50 43.06 3.67
75 76 8.205131 TCAACTGACTTAAGTTCAGTAAAACC 57.795 34.615 26.71 8.28 43.06 3.27
76 77 9.095065 TCTCAACTGACTTAAGTTCAGTAAAAC 57.905 33.333 26.71 8.85 43.06 2.43
77 78 9.832445 ATCTCAACTGACTTAAGTTCAGTAAAA 57.168 29.630 26.71 18.64 43.06 1.52
78 79 9.832445 AATCTCAACTGACTTAAGTTCAGTAAA 57.168 29.630 26.71 20.14 43.06 2.01
79 80 9.832445 AAATCTCAACTGACTTAAGTTCAGTAA 57.168 29.630 26.71 20.36 43.06 2.24
80 81 9.832445 AAAATCTCAACTGACTTAAGTTCAGTA 57.168 29.630 26.71 17.94 43.06 2.74
81 82 8.738645 AAAATCTCAACTGACTTAAGTTCAGT 57.261 30.769 23.60 23.60 45.43 3.41
82 83 9.050601 AGAAAATCTCAACTGACTTAAGTTCAG 57.949 33.333 22.70 22.70 38.34 3.02
83 84 8.964476 AGAAAATCTCAACTGACTTAAGTTCA 57.036 30.769 10.02 8.35 38.34 3.18
91 92 9.522804 GTCGATATAAGAAAATCTCAACTGACT 57.477 33.333 0.00 0.00 0.00 3.41
92 93 9.302345 TGTCGATATAAGAAAATCTCAACTGAC 57.698 33.333 0.00 0.00 0.00 3.51
105 106 9.908152 ACACGAATCATAATGTCGATATAAGAA 57.092 29.630 0.00 0.00 38.16 2.52
108 109 9.783256 CCTACACGAATCATAATGTCGATATAA 57.217 33.333 0.00 0.00 38.16 0.98
109 110 8.403236 CCCTACACGAATCATAATGTCGATATA 58.597 37.037 0.00 0.00 38.16 0.86
110 111 7.258441 CCCTACACGAATCATAATGTCGATAT 58.742 38.462 0.00 0.00 38.16 1.63
115 116 4.750098 CACCCCTACACGAATCATAATGTC 59.250 45.833 0.00 0.00 0.00 3.06
122 123 1.268992 CCCCACCCCTACACGAATCA 61.269 60.000 0.00 0.00 0.00 2.57
151 152 2.541762 GCTAGCCGTCAAATCTCACATC 59.458 50.000 2.29 0.00 0.00 3.06
162 163 4.063967 CGGTGGTGCTAGCCGTCA 62.064 66.667 13.29 4.94 40.53 4.35
165 166 1.940883 TAAGTCGGTGGTGCTAGCCG 61.941 60.000 13.29 8.17 46.12 5.52
172 173 5.623673 CGAAATTTTTCTTAAGTCGGTGGTG 59.376 40.000 1.63 0.00 35.07 4.17
184 185 7.930217 TCATCTGAGTTGTCGAAATTTTTCTT 58.070 30.769 0.00 0.00 35.07 2.52
191 192 6.652481 ACATTCTTCATCTGAGTTGTCGAAAT 59.348 34.615 0.00 0.00 0.00 2.17
203 204 1.667724 GCGGGTCACATTCTTCATCTG 59.332 52.381 0.00 0.00 0.00 2.90
204 205 1.278985 TGCGGGTCACATTCTTCATCT 59.721 47.619 0.00 0.00 0.00 2.90
205 206 1.737838 TGCGGGTCACATTCTTCATC 58.262 50.000 0.00 0.00 0.00 2.92
226 227 4.321156 CCAGCTGCTATGCAAACAAGTAAA 60.321 41.667 8.66 0.00 38.41 2.01
229 230 1.542915 CCAGCTGCTATGCAAACAAGT 59.457 47.619 8.66 0.00 38.41 3.16
244 245 1.834263 GGTCCTCAATGTACTCCAGCT 59.166 52.381 0.00 0.00 0.00 4.24
246 247 1.825474 ACGGTCCTCAATGTACTCCAG 59.175 52.381 0.00 0.00 0.00 3.86
247 248 1.933021 ACGGTCCTCAATGTACTCCA 58.067 50.000 0.00 0.00 0.00 3.86
248 249 2.223758 GCTACGGTCCTCAATGTACTCC 60.224 54.545 0.00 0.00 0.00 3.85
249 250 2.223758 GGCTACGGTCCTCAATGTACTC 60.224 54.545 0.00 0.00 0.00 2.59
250 251 1.755380 GGCTACGGTCCTCAATGTACT 59.245 52.381 0.00 0.00 0.00 2.73
262 263 3.105283 AGTAAGGAATTCTGGCTACGGT 58.895 45.455 5.23 0.00 0.00 4.83
279 280 4.219725 GCAAACCAAATGAGCCCTTAGTAA 59.780 41.667 0.00 0.00 0.00 2.24
295 296 2.285889 TTTGGAGACCCCGCAAACCA 62.286 55.000 0.00 0.00 37.93 3.67
306 309 5.982890 TCATTTTCCCTTGATTTGGAGAC 57.017 39.130 0.00 0.00 30.91 3.36
308 311 7.219322 ACTTTTCATTTTCCCTTGATTTGGAG 58.781 34.615 0.00 0.00 30.91 3.86
324 327 9.822185 GGGCATCTAAATCATTTACTTTTCATT 57.178 29.630 0.00 0.00 0.00 2.57
343 346 1.002069 TTGGATTGGACAGGGCATCT 58.998 50.000 0.00 0.00 0.00 2.90
384 638 3.567478 ATTCCTGGCATTAGGTGAGAC 57.433 47.619 0.00 0.00 38.99 3.36
385 639 3.782523 AGAATTCCTGGCATTAGGTGAGA 59.217 43.478 0.65 0.00 38.99 3.27
386 640 4.162040 AGAATTCCTGGCATTAGGTGAG 57.838 45.455 0.65 0.00 38.99 3.51
387 641 4.591321 AAGAATTCCTGGCATTAGGTGA 57.409 40.909 0.65 0.00 38.99 4.02
388 642 4.823989 CCTAAGAATTCCTGGCATTAGGTG 59.176 45.833 15.77 0.00 38.99 4.00
389 643 4.726825 TCCTAAGAATTCCTGGCATTAGGT 59.273 41.667 20.17 0.00 40.02 3.08
437 691 5.987347 GGCATTAGGTGTACGCTATTTCTTA 59.013 40.000 6.35 0.00 0.00 2.10
442 696 3.494398 CCTGGCATTAGGTGTACGCTATT 60.494 47.826 6.35 0.00 32.99 1.73
447 701 2.684001 TTCCTGGCATTAGGTGTACG 57.316 50.000 0.00 0.00 38.99 3.67
452 706 3.956199 CACATGAATTCCTGGCATTAGGT 59.044 43.478 14.24 0.00 38.99 3.08
453 707 4.209538 TCACATGAATTCCTGGCATTAGG 58.790 43.478 14.24 0.00 39.29 2.69
454 708 5.840243 TTCACATGAATTCCTGGCATTAG 57.160 39.130 14.24 0.00 0.00 1.73
455 709 5.392919 CGTTTCACATGAATTCCTGGCATTA 60.393 40.000 14.24 0.00 33.54 1.90
456 710 4.618927 CGTTTCACATGAATTCCTGGCATT 60.619 41.667 14.24 0.00 33.54 3.56
457 711 3.119388 CGTTTCACATGAATTCCTGGCAT 60.119 43.478 14.24 0.00 33.54 4.40
458 712 2.228582 CGTTTCACATGAATTCCTGGCA 59.771 45.455 14.24 0.00 33.54 4.92
459 713 2.487762 TCGTTTCACATGAATTCCTGGC 59.512 45.455 14.24 0.48 33.54 4.85
460 714 3.753272 AGTCGTTTCACATGAATTCCTGG 59.247 43.478 14.24 4.75 33.54 4.45
461 715 4.214119 ACAGTCGTTTCACATGAATTCCTG 59.786 41.667 8.96 8.96 33.54 3.86
462 716 4.389374 ACAGTCGTTTCACATGAATTCCT 58.611 39.130 0.00 0.00 33.54 3.36
463 717 4.213270 TGACAGTCGTTTCACATGAATTCC 59.787 41.667 0.00 0.00 33.54 3.01
464 718 5.342806 TGACAGTCGTTTCACATGAATTC 57.657 39.130 0.00 0.00 33.54 2.17
465 719 5.947228 ATGACAGTCGTTTCACATGAATT 57.053 34.783 0.00 0.00 33.54 2.17
472 726 6.633634 GCTATCTACTATGACAGTCGTTTCAC 59.366 42.308 0.00 0.00 38.80 3.18
481 735 5.707242 TTTCCCGCTATCTACTATGACAG 57.293 43.478 0.00 0.00 0.00 3.51
497 751 3.460857 TTTGAACCATGGTTTTTCCCG 57.539 42.857 30.33 0.00 38.60 5.14
499 753 5.819901 TGTGATTTTGAACCATGGTTTTTCC 59.180 36.000 30.33 18.01 38.60 3.13
500 754 6.917217 TGTGATTTTGAACCATGGTTTTTC 57.083 33.333 30.33 18.80 38.60 2.29
571 825 1.395954 TCGAACTCGATCGTGACGATT 59.604 47.619 22.28 6.18 47.00 3.34
612 866 2.438975 AGGGCATGGACGTGCATG 60.439 61.111 36.83 36.83 46.81 4.06
641 900 0.172578 TTCTATGGTGACCGCGTCAG 59.827 55.000 4.92 0.00 43.57 3.51
655 914 3.120649 GCGTTCTTGCGACTTGTTTCTAT 60.121 43.478 0.00 0.00 0.00 1.98
704 963 1.728971 GTCCTGTTGTGCTCGATCTTG 59.271 52.381 0.00 0.00 0.00 3.02
730 989 1.241990 TGGAGTAAGCGCGACTGTCT 61.242 55.000 20.70 8.70 0.00 3.41
735 994 0.450983 ACTACTGGAGTAAGCGCGAC 59.549 55.000 12.10 4.27 36.27 5.19
781 1045 4.181010 CCAGCGGGGGATCAGTGG 62.181 72.222 0.00 0.00 0.00 4.00
938 1202 1.881903 CTGTCGGCCTGAGCTCTTGA 61.882 60.000 16.19 2.71 39.73 3.02
970 1237 3.944015 AGCTTGGAAAATTGGATCGAGAG 59.056 43.478 0.00 0.00 0.00 3.20
1497 1770 1.467734 GTGAGGTTCTTGCAGCTGATG 59.532 52.381 20.43 6.29 0.00 3.07
1508 1781 4.052229 CGTCGCCGGTGAGGTTCT 62.052 66.667 25.73 0.00 43.70 3.01
1554 1827 3.382865 TCCTGATCATCTTCTGGAACTCG 59.617 47.826 0.00 0.00 39.82 4.18
1579 1852 1.070134 CTTGGTGAGGAAGTTGACGGA 59.930 52.381 0.00 0.00 0.00 4.69
1656 1929 4.008933 ATGCCGGCGATCTAGGGC 62.009 66.667 23.90 0.85 45.76 5.19
1685 1958 2.672961 TCCATTGTTACTGAGCCGAG 57.327 50.000 0.00 0.00 0.00 4.63
1772 2045 9.366216 GAAGGAAACAAAACATGAAACTAAACT 57.634 29.630 0.00 0.00 0.00 2.66
1820 2111 7.308348 CCCAACATTTAACGACTACAGTCAAAT 60.308 37.037 9.88 5.52 44.99 2.32
1866 2157 9.174166 AGCAGATACGAAATTTAAACCAACTAT 57.826 29.630 0.00 0.00 0.00 2.12
1896 2187 4.285003 TGTACTACATTTGCACTGGTACCT 59.715 41.667 14.36 0.00 0.00 3.08
1918 2209 3.766151 TCGAGAATTAGCCAACGTACTG 58.234 45.455 0.00 0.00 0.00 2.74
1919 2210 4.171754 GTTCGAGAATTAGCCAACGTACT 58.828 43.478 0.00 0.00 0.00 2.73
1985 2277 0.179192 GCATTTCGCACGAATGAGCA 60.179 50.000 6.28 0.00 41.79 4.26
1986 2278 2.559123 GCATTTCGCACGAATGAGC 58.441 52.632 6.28 7.46 41.79 4.26
2034 2326 9.679661 TCTGATCCATATTACTTGTTGCTTTAA 57.320 29.630 0.00 0.00 0.00 1.52
2039 2331 6.767902 TCCTTCTGATCCATATTACTTGTTGC 59.232 38.462 0.00 0.00 0.00 4.17
2041 2333 8.095452 ACTCCTTCTGATCCATATTACTTGTT 57.905 34.615 0.00 0.00 0.00 2.83
2043 2335 8.642432 TGTACTCCTTCTGATCCATATTACTTG 58.358 37.037 0.00 0.00 0.00 3.16
2054 2374 8.660373 CACAAAGTTTATGTACTCCTTCTGATC 58.340 37.037 0.00 0.00 0.00 2.92
2104 2424 6.208644 ACTGTCAGTTTAACATGATTTGTGC 58.791 36.000 0.00 0.00 38.99 4.57
2121 2441 8.029522 TGAAACATCTTAGTTAGCTACTGTCAG 58.970 37.037 0.00 0.00 37.73 3.51
2130 2450 7.223777 GGACTCTCATGAAACATCTTAGTTAGC 59.776 40.741 0.00 0.00 0.00 3.09
2131 2451 8.253810 TGGACTCTCATGAAACATCTTAGTTAG 58.746 37.037 0.00 0.00 0.00 2.34
2163 2630 2.710096 TTTATTCCTCTCCTTGGGCG 57.290 50.000 0.00 0.00 0.00 6.13
2217 3008 3.569194 TGAGTAGACACCCTGCAAAAA 57.431 42.857 0.00 0.00 0.00 1.94
2218 3009 3.569194 TTGAGTAGACACCCTGCAAAA 57.431 42.857 0.00 0.00 0.00 2.44
2219 3010 3.788227 ATTGAGTAGACACCCTGCAAA 57.212 42.857 0.00 0.00 0.00 3.68
2220 3011 3.838317 AGTATTGAGTAGACACCCTGCAA 59.162 43.478 0.00 0.00 0.00 4.08
2221 3012 3.441101 AGTATTGAGTAGACACCCTGCA 58.559 45.455 0.00 0.00 0.00 4.41
2222 3013 4.473477 AAGTATTGAGTAGACACCCTGC 57.527 45.455 0.00 0.00 0.00 4.85
2237 3028 1.146982 AGGGGTGCCACAACAAGTATT 59.853 47.619 0.00 0.00 0.00 1.89
2238 3029 0.777446 AGGGGTGCCACAACAAGTAT 59.223 50.000 0.00 0.00 0.00 2.12
2239 3030 1.436326 TAGGGGTGCCACAACAAGTA 58.564 50.000 0.00 0.00 0.00 2.24
2240 3031 0.553819 TTAGGGGTGCCACAACAAGT 59.446 50.000 0.00 0.00 0.00 3.16
2241 3032 1.698506 TTTAGGGGTGCCACAACAAG 58.301 50.000 0.00 0.00 0.00 3.16
2242 3033 2.160721 TTTTAGGGGTGCCACAACAA 57.839 45.000 0.00 0.00 0.00 2.83
2243 3034 2.160721 TTTTTAGGGGTGCCACAACA 57.839 45.000 0.00 0.00 0.00 3.33
2260 3051 5.835113 TGCAGAAGCTAGAACAAGTTTTT 57.165 34.783 0.00 0.00 42.74 1.94
2261 3052 5.835113 TTGCAGAAGCTAGAACAAGTTTT 57.165 34.783 0.00 0.00 42.74 2.43
2262 3053 5.767168 AGATTGCAGAAGCTAGAACAAGTTT 59.233 36.000 0.00 0.00 42.74 2.66
2263 3054 5.312079 AGATTGCAGAAGCTAGAACAAGTT 58.688 37.500 0.00 0.00 42.74 2.66
2264 3055 4.904241 AGATTGCAGAAGCTAGAACAAGT 58.096 39.130 0.00 0.00 42.74 3.16
2265 3056 5.445673 CGAAGATTGCAGAAGCTAGAACAAG 60.446 44.000 0.00 0.00 42.74 3.16
2266 3057 4.389992 CGAAGATTGCAGAAGCTAGAACAA 59.610 41.667 0.00 0.00 42.74 2.83
2267 3058 3.928992 CGAAGATTGCAGAAGCTAGAACA 59.071 43.478 0.00 0.00 42.74 3.18
2268 3059 3.929610 ACGAAGATTGCAGAAGCTAGAAC 59.070 43.478 0.00 0.00 42.74 3.01
2269 3060 4.193826 ACGAAGATTGCAGAAGCTAGAA 57.806 40.909 0.00 0.00 42.74 2.10
2270 3061 3.876274 ACGAAGATTGCAGAAGCTAGA 57.124 42.857 0.00 0.00 42.74 2.43
2271 3062 6.595772 ATTTACGAAGATTGCAGAAGCTAG 57.404 37.500 0.00 0.00 42.74 3.42
2272 3063 8.487313 TTTATTTACGAAGATTGCAGAAGCTA 57.513 30.769 0.00 0.00 42.74 3.32
2273 3064 6.985188 TTATTTACGAAGATTGCAGAAGCT 57.015 33.333 0.00 0.00 42.74 3.74
2274 3065 9.716507 TTATTTATTTACGAAGATTGCAGAAGC 57.283 29.630 0.00 0.00 42.57 3.86
2277 3068 9.716507 GCTTTATTTATTTACGAAGATTGCAGA 57.283 29.630 0.00 0.00 0.00 4.26
2278 3069 9.722056 AGCTTTATTTATTTACGAAGATTGCAG 57.278 29.630 0.00 0.00 0.00 4.41
2294 3085 9.733556 TCTGGTTTTGAGTCATAGCTTTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
2295 3086 8.635765 TCTGGTTTTGAGTCATAGCTTTATTT 57.364 30.769 0.00 0.00 0.00 1.40
2296 3087 8.635765 TTCTGGTTTTGAGTCATAGCTTTATT 57.364 30.769 0.00 0.00 0.00 1.40
2297 3088 8.814038 ATTCTGGTTTTGAGTCATAGCTTTAT 57.186 30.769 0.00 0.00 0.00 1.40
2298 3089 8.103305 AGATTCTGGTTTTGAGTCATAGCTTTA 58.897 33.333 0.00 0.00 0.00 1.85
2299 3090 6.944862 AGATTCTGGTTTTGAGTCATAGCTTT 59.055 34.615 0.00 0.00 0.00 3.51
2300 3091 6.373774 CAGATTCTGGTTTTGAGTCATAGCTT 59.626 38.462 5.73 0.00 0.00 3.74
2301 3092 5.879223 CAGATTCTGGTTTTGAGTCATAGCT 59.121 40.000 5.73 0.00 0.00 3.32
2302 3093 5.065731 CCAGATTCTGGTTTTGAGTCATAGC 59.934 44.000 22.45 0.00 45.82 2.97
2303 3094 6.674694 CCAGATTCTGGTTTTGAGTCATAG 57.325 41.667 22.45 0.00 45.82 2.23
2317 3108 2.676748 AGCTAGAGGGACCAGATTCTG 58.323 52.381 6.70 6.70 0.00 3.02
2318 3109 3.413105 AAGCTAGAGGGACCAGATTCT 57.587 47.619 0.00 0.00 0.00 2.40
2319 3110 3.491792 CGAAAGCTAGAGGGACCAGATTC 60.492 52.174 0.00 0.00 0.00 2.52
2320 3111 2.432510 CGAAAGCTAGAGGGACCAGATT 59.567 50.000 0.00 0.00 0.00 2.40
2321 3112 2.035632 CGAAAGCTAGAGGGACCAGAT 58.964 52.381 0.00 0.00 0.00 2.90
2322 3113 1.475403 CGAAAGCTAGAGGGACCAGA 58.525 55.000 0.00 0.00 0.00 3.86
2323 3114 0.461961 CCGAAAGCTAGAGGGACCAG 59.538 60.000 0.00 0.00 0.00 4.00
2324 3115 0.252103 ACCGAAAGCTAGAGGGACCA 60.252 55.000 0.00 0.00 0.00 4.02
2325 3116 0.903236 AACCGAAAGCTAGAGGGACC 59.097 55.000 0.00 0.00 0.00 4.46
2326 3117 1.549170 TGAACCGAAAGCTAGAGGGAC 59.451 52.381 0.00 1.34 0.00 4.46
2327 3118 1.933021 TGAACCGAAAGCTAGAGGGA 58.067 50.000 0.00 0.00 0.00 4.20
2328 3119 2.555199 CATGAACCGAAAGCTAGAGGG 58.445 52.381 0.00 0.00 0.00 4.30
2329 3120 1.936547 GCATGAACCGAAAGCTAGAGG 59.063 52.381 0.00 0.00 0.00 3.69
2330 3121 1.936547 GGCATGAACCGAAAGCTAGAG 59.063 52.381 0.00 0.00 0.00 2.43
2331 3122 1.555075 AGGCATGAACCGAAAGCTAGA 59.445 47.619 0.00 0.00 33.69 2.43
2332 3123 2.029838 AGGCATGAACCGAAAGCTAG 57.970 50.000 0.00 0.00 33.69 3.42
2333 3124 2.083774 CAAGGCATGAACCGAAAGCTA 58.916 47.619 0.00 0.00 33.69 3.32
2334 3125 0.883833 CAAGGCATGAACCGAAAGCT 59.116 50.000 0.00 0.00 33.69 3.74
2335 3126 0.881118 TCAAGGCATGAACCGAAAGC 59.119 50.000 0.00 0.00 34.30 3.51
2336 3127 2.154462 AGTCAAGGCATGAACCGAAAG 58.846 47.619 0.00 0.00 40.50 2.62
2337 3128 2.270352 AGTCAAGGCATGAACCGAAA 57.730 45.000 0.00 0.00 40.50 3.46
2338 3129 2.151202 GAAGTCAAGGCATGAACCGAA 58.849 47.619 0.00 0.00 40.50 4.30
2339 3130 1.610624 GGAAGTCAAGGCATGAACCGA 60.611 52.381 0.00 0.00 40.50 4.69
2340 3131 0.804989 GGAAGTCAAGGCATGAACCG 59.195 55.000 0.00 0.00 40.50 4.44
2341 3132 2.206576 AGGAAGTCAAGGCATGAACC 57.793 50.000 0.00 0.00 40.50 3.62
2342 3133 2.887152 ACAAGGAAGTCAAGGCATGAAC 59.113 45.455 0.00 0.00 40.50 3.18
2343 3134 2.886523 CACAAGGAAGTCAAGGCATGAA 59.113 45.455 0.00 0.00 40.50 2.57
2344 3135 2.106338 TCACAAGGAAGTCAAGGCATGA 59.894 45.455 0.00 0.00 35.05 3.07
2345 3136 2.507484 TCACAAGGAAGTCAAGGCATG 58.493 47.619 0.00 0.00 0.00 4.06
2346 3137 2.957402 TCACAAGGAAGTCAAGGCAT 57.043 45.000 0.00 0.00 0.00 4.40
2347 3138 2.957402 ATCACAAGGAAGTCAAGGCA 57.043 45.000 0.00 0.00 0.00 4.75
2348 3139 3.149196 TGAATCACAAGGAAGTCAAGGC 58.851 45.455 0.00 0.00 0.00 4.35
2349 3140 5.972107 ATTGAATCACAAGGAAGTCAAGG 57.028 39.130 0.00 0.00 42.02 3.61
2350 3141 7.966753 CACATATTGAATCACAAGGAAGTCAAG 59.033 37.037 0.00 0.00 42.02 3.02
2351 3142 7.665145 TCACATATTGAATCACAAGGAAGTCAA 59.335 33.333 0.00 0.00 42.02 3.18
2352 3143 7.167535 TCACATATTGAATCACAAGGAAGTCA 58.832 34.615 0.00 0.00 42.02 3.41
2353 3144 7.615582 TCACATATTGAATCACAAGGAAGTC 57.384 36.000 0.00 0.00 42.02 3.01
2354 3145 8.408043 TTTCACATATTGAATCACAAGGAAGT 57.592 30.769 0.00 0.00 43.99 3.01
2355 3146 8.733458 TCTTTCACATATTGAATCACAAGGAAG 58.267 33.333 0.00 0.00 43.99 3.46
2356 3147 8.514594 GTCTTTCACATATTGAATCACAAGGAA 58.485 33.333 0.00 0.00 43.99 3.36
2357 3148 7.665145 TGTCTTTCACATATTGAATCACAAGGA 59.335 33.333 0.00 0.00 43.99 3.36
2358 3149 7.752239 GTGTCTTTCACATATTGAATCACAAGG 59.248 37.037 15.43 0.00 43.99 3.61
2359 3150 7.479603 CGTGTCTTTCACATATTGAATCACAAG 59.520 37.037 17.49 13.42 43.99 3.16
2360 3151 7.172361 TCGTGTCTTTCACATATTGAATCACAA 59.828 33.333 17.49 0.00 43.99 3.33
2361 3152 6.648725 TCGTGTCTTTCACATATTGAATCACA 59.351 34.615 17.49 13.03 43.99 3.58
2362 3153 7.060600 TCGTGTCTTTCACATATTGAATCAC 57.939 36.000 0.00 9.16 43.99 3.06
2363 3154 7.848223 ATCGTGTCTTTCACATATTGAATCA 57.152 32.000 0.00 0.00 43.99 2.57
2366 3157 9.986833 CAATAATCGTGTCTTTCACATATTGAA 57.013 29.630 15.12 0.00 46.44 2.69
2367 3158 9.161629 ACAATAATCGTGTCTTTCACATATTGA 57.838 29.630 20.95 5.62 46.44 2.57
2368 3159 9.213819 CACAATAATCGTGTCTTTCACATATTG 57.786 33.333 16.83 16.83 46.44 1.90
2369 3160 9.161629 TCACAATAATCGTGTCTTTCACATATT 57.838 29.630 0.00 0.00 46.44 1.28
2370 3161 8.716646 TCACAATAATCGTGTCTTTCACATAT 57.283 30.769 0.00 0.00 46.44 1.78
2371 3162 8.603181 CATCACAATAATCGTGTCTTTCACATA 58.397 33.333 0.00 0.00 46.44 2.29
2372 3163 7.119699 ACATCACAATAATCGTGTCTTTCACAT 59.880 33.333 0.00 0.00 46.44 3.21
2373 3164 6.426633 ACATCACAATAATCGTGTCTTTCACA 59.573 34.615 0.00 0.00 46.44 3.58
2374 3165 6.831769 ACATCACAATAATCGTGTCTTTCAC 58.168 36.000 0.00 0.00 43.03 3.18
2375 3166 6.873605 AGACATCACAATAATCGTGTCTTTCA 59.126 34.615 0.00 0.00 42.43 2.69
2376 3167 7.176075 CAGACATCACAATAATCGTGTCTTTC 58.824 38.462 3.31 0.00 42.43 2.62
2377 3168 6.402550 GCAGACATCACAATAATCGTGTCTTT 60.403 38.462 3.31 0.00 42.43 2.52
2378 3169 5.063944 GCAGACATCACAATAATCGTGTCTT 59.936 40.000 3.31 0.00 42.43 3.01
2379 3170 4.568359 GCAGACATCACAATAATCGTGTCT 59.432 41.667 0.00 0.00 44.98 3.41
2380 3171 4.568359 AGCAGACATCACAATAATCGTGTC 59.432 41.667 0.00 0.00 36.98 3.67
2381 3172 4.330894 CAGCAGACATCACAATAATCGTGT 59.669 41.667 0.00 0.00 35.79 4.49
2382 3173 4.784394 GCAGCAGACATCACAATAATCGTG 60.784 45.833 0.00 0.00 35.63 4.35
2383 3174 3.310774 GCAGCAGACATCACAATAATCGT 59.689 43.478 0.00 0.00 0.00 3.73
2384 3175 3.303593 GGCAGCAGACATCACAATAATCG 60.304 47.826 0.00 0.00 0.00 3.34
2385 3176 3.004106 GGGCAGCAGACATCACAATAATC 59.996 47.826 0.00 0.00 0.00 1.75
2386 3177 2.954318 GGGCAGCAGACATCACAATAAT 59.046 45.455 0.00 0.00 0.00 1.28
2387 3178 2.368439 GGGCAGCAGACATCACAATAA 58.632 47.619 0.00 0.00 0.00 1.40
2388 3179 1.743431 CGGGCAGCAGACATCACAATA 60.743 52.381 0.00 0.00 0.00 1.90
2389 3180 1.028330 CGGGCAGCAGACATCACAAT 61.028 55.000 0.00 0.00 0.00 2.71
2390 3181 1.672030 CGGGCAGCAGACATCACAA 60.672 57.895 0.00 0.00 0.00 3.33
2391 3182 2.046988 CGGGCAGCAGACATCACA 60.047 61.111 0.00 0.00 0.00 3.58
2392 3183 2.046892 ACGGGCAGCAGACATCAC 60.047 61.111 0.00 0.00 0.00 3.06
2393 3184 2.046988 CACGGGCAGCAGACATCA 60.047 61.111 0.00 0.00 0.00 3.07
2394 3185 2.046892 ACACGGGCAGCAGACATC 60.047 61.111 0.00 0.00 0.00 3.06
2395 3186 2.359107 CACACGGGCAGCAGACAT 60.359 61.111 0.00 0.00 0.00 3.06
2396 3187 3.860605 ACACACGGGCAGCAGACA 61.861 61.111 0.00 0.00 0.00 3.41
2397 3188 3.349006 CACACACGGGCAGCAGAC 61.349 66.667 0.00 0.00 0.00 3.51
2398 3189 3.100503 TTCACACACGGGCAGCAGA 62.101 57.895 0.00 0.00 0.00 4.26
2399 3190 2.591429 TTCACACACGGGCAGCAG 60.591 61.111 0.00 0.00 0.00 4.24
2400 3191 2.899838 GTTCACACACGGGCAGCA 60.900 61.111 0.00 0.00 0.00 4.41
2401 3192 2.477176 TTGTTCACACACGGGCAGC 61.477 57.895 0.00 0.00 30.32 5.25
2402 3193 1.355210 GTTGTTCACACACGGGCAG 59.645 57.895 0.00 0.00 30.32 4.85
2403 3194 0.960861 TTGTTGTTCACACACGGGCA 60.961 50.000 0.00 0.00 33.98 5.36
2404 3195 0.248458 CTTGTTGTTCACACACGGGC 60.248 55.000 0.00 0.00 33.98 6.13
2405 3196 1.091537 ACTTGTTGTTCACACACGGG 58.908 50.000 0.00 0.00 33.98 5.28
2406 3197 2.095466 ACAACTTGTTGTTCACACACGG 60.095 45.455 12.73 0.00 36.63 4.94
2407 3198 2.908009 CACAACTTGTTGTTCACACACG 59.092 45.455 15.46 0.19 36.63 4.49
2408 3199 3.668191 CACACAACTTGTTGTTCACACAC 59.332 43.478 15.46 0.00 35.67 3.82
2409 3200 3.316588 ACACACAACTTGTTGTTCACACA 59.683 39.130 15.46 0.00 35.67 3.72
2410 3201 3.896122 ACACACAACTTGTTGTTCACAC 58.104 40.909 15.46 0.00 35.67 3.82
2411 3202 4.576216 AACACACAACTTGTTGTTCACA 57.424 36.364 15.46 0.00 35.67 3.58
2412 3203 5.898630 AAAACACACAACTTGTTGTTCAC 57.101 34.783 15.46 0.00 37.26 3.18
2440 3231 4.156190 TGTTACTCACACTTTCCGCAAAAA 59.844 37.500 0.00 0.00 0.00 1.94
2441 3232 3.690139 TGTTACTCACACTTTCCGCAAAA 59.310 39.130 0.00 0.00 0.00 2.44
2442 3233 3.271729 TGTTACTCACACTTTCCGCAAA 58.728 40.909 0.00 0.00 0.00 3.68
2443 3234 2.907634 TGTTACTCACACTTTCCGCAA 58.092 42.857 0.00 0.00 0.00 4.85
2444 3235 2.605837 TGTTACTCACACTTTCCGCA 57.394 45.000 0.00 0.00 0.00 5.69
2445 3236 2.870411 ACTTGTTACTCACACTTTCCGC 59.130 45.455 0.00 0.00 33.98 5.54
2446 3237 4.116961 TCACTTGTTACTCACACTTTCCG 58.883 43.478 0.00 0.00 33.98 4.30
2447 3238 5.116882 ACTCACTTGTTACTCACACTTTCC 58.883 41.667 0.00 0.00 33.98 3.13
2448 3239 5.810587 TGACTCACTTGTTACTCACACTTTC 59.189 40.000 0.00 0.00 33.98 2.62
2449 3240 5.581085 GTGACTCACTTGTTACTCACACTTT 59.419 40.000 1.58 0.00 33.98 2.66
2450 3241 5.109903 GTGACTCACTTGTTACTCACACTT 58.890 41.667 1.58 0.00 33.98 3.16
2451 3242 4.441634 GGTGACTCACTTGTTACTCACACT 60.442 45.833 9.08 0.00 33.98 3.55
2452 3243 3.802685 GGTGACTCACTTGTTACTCACAC 59.197 47.826 9.08 0.00 33.98 3.82
2453 3244 3.704566 AGGTGACTCACTTGTTACTCACA 59.295 43.478 9.08 0.00 32.90 3.58
2454 3245 4.323553 AGGTGACTCACTTGTTACTCAC 57.676 45.455 9.08 0.00 32.90 3.51
2455 3246 6.474140 TTTAGGTGACTCACTTGTTACTCA 57.526 37.500 9.08 0.00 43.67 3.41
2456 3247 7.494952 ACTTTTTAGGTGACTCACTTGTTACTC 59.505 37.037 9.08 0.00 43.67 2.59
2457 3248 7.336396 ACTTTTTAGGTGACTCACTTGTTACT 58.664 34.615 9.08 0.00 43.67 2.24
2458 3249 7.549615 ACTTTTTAGGTGACTCACTTGTTAC 57.450 36.000 9.08 0.00 43.67 2.50
2459 3250 9.841295 AATACTTTTTAGGTGACTCACTTGTTA 57.159 29.630 9.08 0.00 43.67 2.41
2460 3251 8.747538 AATACTTTTTAGGTGACTCACTTGTT 57.252 30.769 9.08 0.00 43.67 2.83
2461 3252 7.990886 TGAATACTTTTTAGGTGACTCACTTGT 59.009 33.333 9.08 0.00 43.67 3.16
2462 3253 8.378172 TGAATACTTTTTAGGTGACTCACTTG 57.622 34.615 9.08 0.00 43.67 3.16
2463 3254 8.974060 TTGAATACTTTTTAGGTGACTCACTT 57.026 30.769 9.08 4.09 43.67 3.16
2464 3255 8.974060 TTTGAATACTTTTTAGGTGACTCACT 57.026 30.769 9.08 0.00 43.67 3.41
2484 3275 9.709495 CAGGTGGAAAAAGATAATCAATTTGAA 57.291 29.630 2.68 0.00 0.00 2.69
2485 3276 8.313292 CCAGGTGGAAAAAGATAATCAATTTGA 58.687 33.333 0.75 0.75 37.39 2.69
2486 3277 7.064966 GCCAGGTGGAAAAAGATAATCAATTTG 59.935 37.037 0.00 0.00 37.39 2.32
2487 3278 7.038088 AGCCAGGTGGAAAAAGATAATCAATTT 60.038 33.333 0.00 0.00 37.39 1.82
2488 3279 6.441604 AGCCAGGTGGAAAAAGATAATCAATT 59.558 34.615 0.00 0.00 37.39 2.32
2489 3280 5.960202 AGCCAGGTGGAAAAAGATAATCAAT 59.040 36.000 0.00 0.00 37.39 2.57
2490 3281 5.332743 AGCCAGGTGGAAAAAGATAATCAA 58.667 37.500 0.00 0.00 37.39 2.57
2491 3282 4.934356 AGCCAGGTGGAAAAAGATAATCA 58.066 39.130 0.00 0.00 37.39 2.57
2492 3283 8.691661 TTATAGCCAGGTGGAAAAAGATAATC 57.308 34.615 0.00 0.00 37.39 1.75
2493 3284 8.282256 ACTTATAGCCAGGTGGAAAAAGATAAT 58.718 33.333 0.00 0.00 37.39 1.28
2494 3285 7.639378 ACTTATAGCCAGGTGGAAAAAGATAA 58.361 34.615 0.00 0.00 37.39 1.75
2495 3286 7.092623 TGACTTATAGCCAGGTGGAAAAAGATA 60.093 37.037 0.00 0.00 37.39 1.98
2496 3287 6.079712 ACTTATAGCCAGGTGGAAAAAGAT 57.920 37.500 0.00 0.00 37.39 2.40
2497 3288 5.013704 TGACTTATAGCCAGGTGGAAAAAGA 59.986 40.000 0.00 0.00 37.39 2.52
2498 3289 5.253330 TGACTTATAGCCAGGTGGAAAAAG 58.747 41.667 0.00 0.36 37.39 2.27
2499 3290 5.249780 TGACTTATAGCCAGGTGGAAAAA 57.750 39.130 0.00 0.00 37.39 1.94
2500 3291 4.919774 TGACTTATAGCCAGGTGGAAAA 57.080 40.909 0.00 0.00 37.39 2.29
2501 3292 4.288626 AGTTGACTTATAGCCAGGTGGAAA 59.711 41.667 0.00 0.00 37.39 3.13
2502 3293 3.844211 AGTTGACTTATAGCCAGGTGGAA 59.156 43.478 0.00 0.00 37.39 3.53
2503 3294 3.450904 AGTTGACTTATAGCCAGGTGGA 58.549 45.455 0.00 0.00 37.39 4.02
2504 3295 3.914426 AGTTGACTTATAGCCAGGTGG 57.086 47.619 0.00 0.00 38.53 4.61
2505 3296 5.245531 TGAAAGTTGACTTATAGCCAGGTG 58.754 41.667 0.00 0.00 34.61 4.00
2506 3297 5.499004 TGAAAGTTGACTTATAGCCAGGT 57.501 39.130 0.00 0.00 34.61 4.00
2507 3298 6.817765 TTTGAAAGTTGACTTATAGCCAGG 57.182 37.500 0.00 0.00 34.61 4.45
2508 3299 9.346725 GATTTTTGAAAGTTGACTTATAGCCAG 57.653 33.333 0.00 0.00 34.61 4.85
2509 3300 9.077885 AGATTTTTGAAAGTTGACTTATAGCCA 57.922 29.630 0.00 0.00 34.61 4.75
2510 3301 9.914131 AAGATTTTTGAAAGTTGACTTATAGCC 57.086 29.630 0.00 0.00 34.61 3.93
2516 3307 9.710900 ACAAGAAAGATTTTTGAAAGTTGACTT 57.289 25.926 1.00 0.00 37.91 3.01
2517 3308 9.710900 AACAAGAAAGATTTTTGAAAGTTGACT 57.289 25.926 1.00 0.00 0.00 3.41
2518 3309 9.745323 CAACAAGAAAGATTTTTGAAAGTTGAC 57.255 29.630 0.00 0.00 34.92 3.18
2519 3310 8.442384 GCAACAAGAAAGATTTTTGAAAGTTGA 58.558 29.630 0.00 0.00 34.92 3.18
2520 3311 8.229137 TGCAACAAGAAAGATTTTTGAAAGTTG 58.771 29.630 0.00 0.00 35.76 3.16
2521 3312 8.229811 GTGCAACAAGAAAGATTTTTGAAAGTT 58.770 29.630 0.00 0.00 36.32 2.66
2522 3313 7.148423 GGTGCAACAAGAAAGATTTTTGAAAGT 60.148 33.333 0.00 0.00 39.98 2.66
2523 3314 7.064966 AGGTGCAACAAGAAAGATTTTTGAAAG 59.935 33.333 3.64 0.00 39.98 2.62
2524 3315 6.878389 AGGTGCAACAAGAAAGATTTTTGAAA 59.122 30.769 3.64 0.00 39.98 2.69
2525 3316 6.405538 AGGTGCAACAAGAAAGATTTTTGAA 58.594 32.000 3.64 0.00 39.98 2.69
2526 3317 5.976458 AGGTGCAACAAGAAAGATTTTTGA 58.024 33.333 3.64 0.00 39.98 2.69
2527 3318 5.811613 TGAGGTGCAACAAGAAAGATTTTTG 59.188 36.000 3.64 0.00 39.98 2.44
2528 3319 5.976458 TGAGGTGCAACAAGAAAGATTTTT 58.024 33.333 3.64 0.00 39.98 1.94
2529 3320 5.596836 TGAGGTGCAACAAGAAAGATTTT 57.403 34.783 3.64 0.00 39.98 1.82
2530 3321 5.796424 ATGAGGTGCAACAAGAAAGATTT 57.204 34.783 3.64 0.00 39.98 2.17
2531 3322 5.069516 ACAATGAGGTGCAACAAGAAAGATT 59.930 36.000 3.64 0.00 39.98 2.40
2532 3323 4.586001 ACAATGAGGTGCAACAAGAAAGAT 59.414 37.500 3.64 0.00 39.98 2.40
2533 3324 3.953612 ACAATGAGGTGCAACAAGAAAGA 59.046 39.130 3.64 0.00 39.98 2.52
2534 3325 4.037208 AGACAATGAGGTGCAACAAGAAAG 59.963 41.667 3.64 0.00 39.98 2.62
2535 3326 3.953612 AGACAATGAGGTGCAACAAGAAA 59.046 39.130 3.64 0.00 39.98 2.52
2536 3327 3.554934 AGACAATGAGGTGCAACAAGAA 58.445 40.909 3.64 0.00 39.98 2.52
2537 3328 3.141398 GAGACAATGAGGTGCAACAAGA 58.859 45.455 3.64 0.00 39.98 3.02
2538 3329 3.144506 AGAGACAATGAGGTGCAACAAG 58.855 45.455 3.64 0.00 39.98 3.16
2539 3330 3.141398 GAGAGACAATGAGGTGCAACAA 58.859 45.455 3.64 0.00 39.98 2.83
2540 3331 2.550855 GGAGAGACAATGAGGTGCAACA 60.551 50.000 3.64 0.00 39.98 3.33
2541 3332 2.079925 GGAGAGACAATGAGGTGCAAC 58.920 52.381 0.00 0.00 0.00 4.17
2542 3333 1.699083 TGGAGAGACAATGAGGTGCAA 59.301 47.619 0.00 0.00 0.00 4.08
2543 3334 1.277273 CTGGAGAGACAATGAGGTGCA 59.723 52.381 0.00 0.00 0.00 4.57
2544 3335 1.552337 TCTGGAGAGACAATGAGGTGC 59.448 52.381 0.00 0.00 0.00 5.01
2545 3336 3.969287 TTCTGGAGAGACAATGAGGTG 57.031 47.619 0.00 0.00 0.00 4.00
2546 3337 4.163427 TCTTTCTGGAGAGACAATGAGGT 58.837 43.478 0.00 0.00 0.00 3.85
2547 3338 4.222588 ACTCTTTCTGGAGAGACAATGAGG 59.777 45.833 8.75 0.00 44.78 3.86
2548 3339 5.404466 ACTCTTTCTGGAGAGACAATGAG 57.596 43.478 8.75 0.00 44.78 2.90
2549 3340 5.305386 TGAACTCTTTCTGGAGAGACAATGA 59.695 40.000 8.75 0.00 44.78 2.57
2550 3341 5.545588 TGAACTCTTTCTGGAGAGACAATG 58.454 41.667 8.75 0.00 44.78 2.82
2551 3342 5.815233 TGAACTCTTTCTGGAGAGACAAT 57.185 39.130 8.75 0.00 44.78 2.71
2552 3343 5.605534 CTTGAACTCTTTCTGGAGAGACAA 58.394 41.667 8.75 11.72 44.78 3.18
2553 3344 4.502259 GCTTGAACTCTTTCTGGAGAGACA 60.502 45.833 8.75 5.89 44.78 3.41
2554 3345 3.993736 GCTTGAACTCTTTCTGGAGAGAC 59.006 47.826 8.75 3.73 44.78 3.36
2555 3346 3.007398 GGCTTGAACTCTTTCTGGAGAGA 59.993 47.826 8.75 1.43 44.78 3.10
2556 3347 3.333804 GGCTTGAACTCTTTCTGGAGAG 58.666 50.000 0.60 0.60 46.82 3.20
2557 3348 2.039084 GGGCTTGAACTCTTTCTGGAGA 59.961 50.000 0.00 0.00 37.13 3.71
2558 3349 2.224621 TGGGCTTGAACTCTTTCTGGAG 60.225 50.000 0.00 0.00 39.09 3.86
2559 3350 1.774254 TGGGCTTGAACTCTTTCTGGA 59.226 47.619 0.00 0.00 32.36 3.86
2560 3351 2.276732 TGGGCTTGAACTCTTTCTGG 57.723 50.000 0.00 0.00 32.36 3.86
2561 3352 4.363138 GTTTTGGGCTTGAACTCTTTCTG 58.637 43.478 0.00 0.00 32.36 3.02
2562 3353 3.384789 GGTTTTGGGCTTGAACTCTTTCT 59.615 43.478 0.00 0.00 32.36 2.52
2563 3354 3.492656 GGGTTTTGGGCTTGAACTCTTTC 60.493 47.826 0.00 0.00 0.00 2.62
2564 3355 2.434336 GGGTTTTGGGCTTGAACTCTTT 59.566 45.455 0.00 0.00 0.00 2.52
2565 3356 2.039418 GGGTTTTGGGCTTGAACTCTT 58.961 47.619 0.00 0.00 0.00 2.85
2566 3357 1.217942 AGGGTTTTGGGCTTGAACTCT 59.782 47.619 0.00 0.00 29.52 3.24
2567 3358 1.704641 AGGGTTTTGGGCTTGAACTC 58.295 50.000 0.00 0.00 0.00 3.01
2568 3359 3.322191 TTAGGGTTTTGGGCTTGAACT 57.678 42.857 0.00 0.00 0.00 3.01
2569 3360 3.864540 GCATTAGGGTTTTGGGCTTGAAC 60.865 47.826 0.00 0.00 0.00 3.18
2570 3361 2.301583 GCATTAGGGTTTTGGGCTTGAA 59.698 45.455 0.00 0.00 0.00 2.69
2571 3362 1.899142 GCATTAGGGTTTTGGGCTTGA 59.101 47.619 0.00 0.00 0.00 3.02
2572 3363 1.622811 TGCATTAGGGTTTTGGGCTTG 59.377 47.619 0.00 0.00 0.00 4.01
2573 3364 1.623311 GTGCATTAGGGTTTTGGGCTT 59.377 47.619 0.00 0.00 0.00 4.35
2574 3365 1.266178 GTGCATTAGGGTTTTGGGCT 58.734 50.000 0.00 0.00 0.00 5.19
2575 3366 0.972883 TGTGCATTAGGGTTTTGGGC 59.027 50.000 0.00 0.00 0.00 5.36
2576 3367 2.247358 AGTGTGCATTAGGGTTTTGGG 58.753 47.619 0.00 0.00 0.00 4.12
2577 3368 3.652274 CAAGTGTGCATTAGGGTTTTGG 58.348 45.455 0.00 0.00 0.00 3.28
2591 3382 2.095768 CCGGTTGTCATAAGCAAGTGTG 60.096 50.000 0.00 0.00 0.00 3.82
2592 3383 2.151202 CCGGTTGTCATAAGCAAGTGT 58.849 47.619 0.00 0.00 0.00 3.55
2593 3384 1.468520 CCCGGTTGTCATAAGCAAGTG 59.531 52.381 0.00 0.00 0.00 3.16
2594 3385 1.349688 TCCCGGTTGTCATAAGCAAGT 59.650 47.619 0.00 0.00 0.00 3.16
2595 3386 2.009774 CTCCCGGTTGTCATAAGCAAG 58.990 52.381 0.00 0.00 0.00 4.01
2596 3387 1.339631 CCTCCCGGTTGTCATAAGCAA 60.340 52.381 0.00 0.00 0.00 3.91
2597 3388 0.251916 CCTCCCGGTTGTCATAAGCA 59.748 55.000 0.00 0.00 0.00 3.91
2598 3389 0.463833 CCCTCCCGGTTGTCATAAGC 60.464 60.000 0.00 0.00 0.00 3.09
2599 3390 1.139058 CTCCCTCCCGGTTGTCATAAG 59.861 57.143 0.00 0.00 0.00 1.73
2600 3391 1.200519 CTCCCTCCCGGTTGTCATAA 58.799 55.000 0.00 0.00 0.00 1.90
2601 3392 0.042131 ACTCCCTCCCGGTTGTCATA 59.958 55.000 0.00 0.00 0.00 2.15
2602 3393 0.840722 AACTCCCTCCCGGTTGTCAT 60.841 55.000 0.00 0.00 0.00 3.06
2641 3432 3.583806 CTTCATCGCAGATGGAGATACC 58.416 50.000 17.05 0.00 45.12 2.73


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.