Multiple sequence alignment - TraesCS5D01G490600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G490600 chr5D 100.000 2513 0 0 1 2513 525178509 525175997 0.000000e+00 4641.0
1 TraesCS5D01G490600 chr5D 86.264 1274 82 35 313 1520 525127284 525126038 0.000000e+00 1297.0
2 TraesCS5D01G490600 chr5D 87.097 124 12 4 1783 1906 386050083 386050202 1.210000e-28 137.0
3 TraesCS5D01G490600 chr5D 87.097 124 13 3 1783 1906 481980984 481981104 1.210000e-28 137.0
4 TraesCS5D01G490600 chr5D 85.496 131 13 4 1780 1909 407847174 407847049 5.640000e-27 132.0
5 TraesCS5D01G490600 chr5D 85.965 114 8 5 102 208 525120369 525120257 5.680000e-22 115.0
6 TraesCS5D01G490600 chr5D 96.970 33 1 0 1488 1520 525124937 525124905 3.490000e-04 56.5
7 TraesCS5D01G490600 chr5B 85.827 1517 113 53 79 1513 659550460 659548964 0.000000e+00 1517.0
8 TraesCS5D01G490600 chr5B 89.807 726 44 12 826 1523 659506330 659505607 0.000000e+00 904.0
9 TraesCS5D01G490600 chr5B 88.220 781 55 16 766 1513 659523451 659522675 0.000000e+00 898.0
10 TraesCS5D01G490600 chr5B 94.054 555 28 3 1 553 659507438 659506887 0.000000e+00 837.0
11 TraesCS5D01G490600 chr5B 82.456 570 52 31 234 768 659532395 659531839 2.950000e-124 455.0
12 TraesCS5D01G490600 chr5B 92.553 188 8 5 623 805 659506820 659506634 5.330000e-67 265.0
13 TraesCS5D01G490600 chr5B 84.615 221 29 2 2017 2233 659521695 659521476 5.440000e-52 215.0
14 TraesCS5D01G490600 chr5B 94.048 84 4 1 2073 2155 659548056 659547973 2.620000e-25 126.0
15 TraesCS5D01G490600 chr5B 82.540 126 15 6 1662 1784 659548698 659548577 1.230000e-18 104.0
16 TraesCS5D01G490600 chr5A 86.146 1292 93 34 299 1520 651541433 651540158 0.000000e+00 1315.0
17 TraesCS5D01G490600 chr5A 85.974 934 55 29 623 1517 651528755 651527859 0.000000e+00 929.0
18 TraesCS5D01G490600 chr5A 79.000 600 91 19 936 1514 651518056 651517471 6.560000e-101 377.0
19 TraesCS5D01G490600 chr5A 83.025 324 29 10 285 593 651529126 651528814 1.150000e-68 270.0
20 TraesCS5D01G490600 chr5A 88.000 225 21 5 2012 2233 651539295 651539074 6.890000e-66 261.0
21 TraesCS5D01G490600 chr5A 85.714 161 19 3 1624 1784 651527024 651526868 1.550000e-37 167.0
22 TraesCS5D01G490600 chr4A 86.364 132 15 3 1781 1912 681656014 681655886 9.370000e-30 141.0
23 TraesCS5D01G490600 chr1D 86.614 127 9 4 1781 1903 447507316 447507194 1.570000e-27 134.0
24 TraesCS5D01G490600 chr1D 85.938 128 12 4 1783 1909 319517717 319517595 5.640000e-27 132.0
25 TraesCS5D01G490600 chr1D 86.047 129 11 6 1783 1909 416134394 416134517 5.640000e-27 132.0
26 TraesCS5D01G490600 chr1B 85.606 132 13 4 1780 1909 394100277 394100404 1.570000e-27 134.0
27 TraesCS5D01G490600 chr3D 86.400 125 11 6 1786 1909 98564269 98564388 5.640000e-27 132.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G490600 chr5D 525175997 525178509 2512 True 4641.000000 4641 100.000000 1 2513 1 chr5D.!!$R3 2512
1 TraesCS5D01G490600 chr5D 525124905 525127284 2379 True 676.750000 1297 91.617000 313 1520 2 chr5D.!!$R4 1207
2 TraesCS5D01G490600 chr5B 659505607 659507438 1831 True 668.666667 904 92.138000 1 1523 3 chr5B.!!$R2 1522
3 TraesCS5D01G490600 chr5B 659547973 659550460 2487 True 582.333333 1517 87.471667 79 2155 3 chr5B.!!$R4 2076
4 TraesCS5D01G490600 chr5B 659521476 659523451 1975 True 556.500000 898 86.417500 766 2233 2 chr5B.!!$R3 1467
5 TraesCS5D01G490600 chr5B 659531839 659532395 556 True 455.000000 455 82.456000 234 768 1 chr5B.!!$R1 534
6 TraesCS5D01G490600 chr5A 651539074 651541433 2359 True 788.000000 1315 87.073000 299 2233 2 chr5A.!!$R3 1934
7 TraesCS5D01G490600 chr5A 651526868 651529126 2258 True 455.333333 929 84.904333 285 1784 3 chr5A.!!$R2 1499
8 TraesCS5D01G490600 chr5A 651517471 651518056 585 True 377.000000 377 79.000000 936 1514 1 chr5A.!!$R1 578

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
947 1415 0.250727 ATTCCCCCACACAGACAACG 60.251 55.0 0.0 0.0 0.0 4.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1903 3429 0.038166 AACCATGGAAGCATGACGGT 59.962 50.0 21.47 0.0 34.66 4.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.430244 AGAACACGTACGCGCCAG 60.430 61.111 16.72 0.00 42.83 4.85
44 45 1.192980 CGTACGCGCCAGTAAACTTTT 59.807 47.619 5.73 0.00 0.00 2.27
72 73 1.658717 CTAGAACATCGCTCGGCCG 60.659 63.158 22.12 22.12 0.00 6.13
77 78 3.592814 CATCGCTCGGCCGGTCTA 61.593 66.667 27.83 9.61 0.00 2.59
92 93 4.321527 GCCGGTCTATACGCTTTACCTAAT 60.322 45.833 1.90 0.00 0.00 1.73
132 133 2.012673 GCTGAGAAATGCTGACCGATT 58.987 47.619 0.00 0.00 0.00 3.34
134 135 3.486542 GCTGAGAAATGCTGACCGATTTC 60.487 47.826 0.00 0.00 38.38 2.17
138 139 3.199946 AGAAATGCTGACCGATTTCCCTA 59.800 43.478 0.00 0.00 38.73 3.53
139 140 2.918712 ATGCTGACCGATTTCCCTAG 57.081 50.000 0.00 0.00 0.00 3.02
232 254 1.140852 ACCACTTCAACTAGCTGCACA 59.859 47.619 1.02 0.00 0.00 4.57
241 274 6.426980 TCAACTAGCTGCACAAATAGATTG 57.573 37.500 1.02 2.99 44.95 2.67
251 284 7.591421 TGCACAAATAGATTGGATCAATGAT 57.409 32.000 0.00 0.00 43.66 2.45
257 290 3.812262 AGATTGGATCAATGATCACGCA 58.188 40.909 22.93 10.45 40.50 5.24
288 321 3.441222 ACCATATATGTGCATGCCGATTG 59.559 43.478 16.68 3.83 0.00 2.67
380 414 1.822114 TTCGTCGATGTCCTGGGCAA 61.822 55.000 4.49 0.00 0.00 4.52
434 475 7.093354 ACGACGTCTCTTTCCGACTATATATA 58.907 38.462 14.70 0.00 0.00 0.86
436 477 9.242477 CGACGTCTCTTTCCGACTATATATATA 57.758 37.037 14.70 2.49 0.00 0.86
578 646 3.759581 ACATCTTCACCCATGCATATCC 58.240 45.455 0.00 0.00 0.00 2.59
591 665 6.207417 CCCATGCATATCCGAATCTAAAAGTT 59.793 38.462 0.00 0.00 0.00 2.66
592 666 7.255590 CCCATGCATATCCGAATCTAAAAGTTT 60.256 37.037 0.00 0.00 0.00 2.66
593 667 8.783093 CCATGCATATCCGAATCTAAAAGTTTA 58.217 33.333 0.00 0.00 0.00 2.01
612 686 9.476202 AAAGTTTAATGTTTTGGACTGATTAGC 57.524 29.630 0.00 0.00 0.00 3.09
620 698 8.044060 TGTTTTGGACTGATTAGCATCTTTAG 57.956 34.615 0.00 0.00 0.00 1.85
626 704 5.121811 ACTGATTAGCATCTTTAGTGGCAG 58.878 41.667 0.00 0.00 0.00 4.85
631 709 1.825090 CATCTTTAGTGGCAGGTGCA 58.175 50.000 4.01 0.00 44.36 4.57
632 710 2.372264 CATCTTTAGTGGCAGGTGCAT 58.628 47.619 4.01 0.00 44.36 3.96
634 712 2.985896 TCTTTAGTGGCAGGTGCATAC 58.014 47.619 4.01 2.59 44.36 2.39
635 713 2.571653 TCTTTAGTGGCAGGTGCATACT 59.428 45.455 13.47 13.47 44.36 2.12
636 714 3.009033 TCTTTAGTGGCAGGTGCATACTT 59.991 43.478 13.98 2.76 44.36 2.24
637 715 2.401583 TAGTGGCAGGTGCATACTTG 57.598 50.000 13.98 0.00 44.36 3.16
689 810 9.643693 CGGTTGAGACCTTATTAGTTTACTTAA 57.356 33.333 0.00 0.00 44.20 1.85
782 916 9.211485 AGTACGTACGTAGTTTACTTAAGGTAA 57.789 33.333 27.48 0.00 37.78 2.85
823 963 2.356665 TGGTAGCTTTCCAGTTGCAA 57.643 45.000 0.00 0.00 0.00 4.08
947 1415 0.250727 ATTCCCCCACACAGACAACG 60.251 55.000 0.00 0.00 0.00 4.10
1083 1574 1.694018 CGGACTCATCGACGTCGTCT 61.694 60.000 34.40 21.52 40.80 4.18
1479 2000 1.675641 GCACCAGGCCACTACCAAG 60.676 63.158 5.01 0.00 36.11 3.61
1517 2077 3.682696 TCAAGCTGTTCGTCTAGGTAGA 58.317 45.455 0.00 0.00 0.00 2.59
1520 2080 5.296283 TCAAGCTGTTCGTCTAGGTAGATAC 59.704 44.000 0.00 0.00 34.39 2.24
1523 2083 4.318689 GCTGTTCGTCTAGGTAGATACGTC 60.319 50.000 0.00 0.00 34.39 4.34
1524 2084 4.122776 TGTTCGTCTAGGTAGATACGTCC 58.877 47.826 0.00 0.00 34.39 4.79
1525 2085 4.122776 GTTCGTCTAGGTAGATACGTCCA 58.877 47.826 0.00 0.00 34.39 4.02
1527 2087 4.965814 TCGTCTAGGTAGATACGTCCATT 58.034 43.478 0.00 0.00 34.39 3.16
1528 2088 5.371526 TCGTCTAGGTAGATACGTCCATTT 58.628 41.667 0.00 0.00 34.39 2.32
1529 2089 5.468072 TCGTCTAGGTAGATACGTCCATTTC 59.532 44.000 0.00 0.00 34.39 2.17
1530 2090 5.469421 CGTCTAGGTAGATACGTCCATTTCT 59.531 44.000 0.00 0.00 34.39 2.52
1531 2091 6.347563 CGTCTAGGTAGATACGTCCATTTCTC 60.348 46.154 0.00 0.00 34.39 2.87
1532 2092 6.002704 TCTAGGTAGATACGTCCATTTCTCC 58.997 44.000 0.00 0.00 0.00 3.71
1533 2093 3.568853 AGGTAGATACGTCCATTTCTCCG 59.431 47.826 0.00 0.00 0.00 4.63
1534 2094 3.305199 GGTAGATACGTCCATTTCTCCGG 60.305 52.174 0.00 0.00 0.00 5.14
1545 2393 4.340950 TCCATTTCTCCGGCAAATAATTCC 59.659 41.667 10.02 0.00 0.00 3.01
1608 2472 4.787598 AGCGTTTCTGAACATTGATGAAC 58.212 39.130 0.00 0.00 35.44 3.18
1615 2479 6.395426 TCTGAACATTGATGAACTTTGCTT 57.605 33.333 0.00 0.00 0.00 3.91
1618 2482 6.151691 TGAACATTGATGAACTTTGCTTAGC 58.848 36.000 0.00 0.00 0.00 3.09
1622 2486 5.963176 TTGATGAACTTTGCTTAGCATCA 57.037 34.783 8.05 9.29 38.76 3.07
1667 3193 8.777865 ATCTAAAAATGTTGTTCTCGATCAGA 57.222 30.769 0.00 0.00 0.00 3.27
1714 3240 5.514274 TGATTGATGTACGTAGAGCATCA 57.486 39.130 18.34 18.34 44.53 3.07
1750 3276 1.007964 TGTTCCATTTGTTGCGCCG 60.008 52.632 4.18 0.00 0.00 6.46
1753 3279 2.125991 CCATTTGTTGCGCCGCAT 60.126 55.556 14.63 0.00 38.76 4.73
1755 3281 2.125991 ATTTGTTGCGCCGCATGG 60.126 55.556 14.63 0.00 38.76 3.66
1809 3335 5.982890 TTTTCCAGAAAATGAGGATGACC 57.017 39.130 1.45 0.00 35.57 4.02
1810 3336 3.652057 TCCAGAAAATGAGGATGACCC 57.348 47.619 0.00 0.00 36.73 4.46
1812 3338 2.659428 CAGAAAATGAGGATGACCCCC 58.341 52.381 0.00 0.00 36.73 5.40
1813 3339 1.212935 AGAAAATGAGGATGACCCCCG 59.787 52.381 0.00 0.00 36.73 5.73
1814 3340 0.258774 AAAATGAGGATGACCCCCGG 59.741 55.000 0.00 0.00 36.73 5.73
1815 3341 1.645402 AAATGAGGATGACCCCCGGG 61.645 60.000 15.80 15.80 42.03 5.73
1824 3350 4.477119 ACCCCCGGGCCTCTCTAC 62.477 72.222 17.73 0.00 39.32 2.59
1825 3351 4.475444 CCCCCGGGCCTCTCTACA 62.475 72.222 17.73 0.00 0.00 2.74
1826 3352 2.122813 CCCCGGGCCTCTCTACAT 60.123 66.667 17.73 0.00 0.00 2.29
1827 3353 2.210711 CCCCGGGCCTCTCTACATC 61.211 68.421 17.73 0.00 0.00 3.06
1828 3354 1.152440 CCCGGGCCTCTCTACATCT 60.152 63.158 8.08 0.00 0.00 2.90
1829 3355 1.467678 CCCGGGCCTCTCTACATCTG 61.468 65.000 8.08 0.00 0.00 2.90
1830 3356 1.467678 CCGGGCCTCTCTACATCTGG 61.468 65.000 0.84 0.00 0.00 3.86
1831 3357 0.468214 CGGGCCTCTCTACATCTGGA 60.468 60.000 0.84 0.00 0.00 3.86
1832 3358 1.794714 GGGCCTCTCTACATCTGGAA 58.205 55.000 0.84 0.00 0.00 3.53
1833 3359 1.691434 GGGCCTCTCTACATCTGGAAG 59.309 57.143 0.84 0.00 0.00 3.46
1844 3370 2.789842 TCTGGAAGATGCATGCAGC 58.210 52.632 27.98 27.98 38.67 5.25
1845 3371 0.750546 TCTGGAAGATGCATGCAGCC 60.751 55.000 30.96 24.10 38.67 4.85
1846 3372 1.000646 TGGAAGATGCATGCAGCCA 60.001 52.632 30.96 26.14 44.83 4.75
1847 3373 1.317431 TGGAAGATGCATGCAGCCAC 61.317 55.000 30.96 23.48 44.83 5.01
1849 3375 0.815734 GAAGATGCATGCAGCCACTT 59.184 50.000 30.96 25.91 44.83 3.16
1850 3376 1.203994 GAAGATGCATGCAGCCACTTT 59.796 47.619 30.96 19.16 44.83 2.66
1852 3378 2.662866 AGATGCATGCAGCCACTTTAT 58.337 42.857 30.96 9.11 44.83 1.40
1853 3379 3.028850 AGATGCATGCAGCCACTTTATT 58.971 40.909 30.96 8.32 44.83 1.40
1854 3380 4.209538 AGATGCATGCAGCCACTTTATTA 58.790 39.130 30.96 0.00 44.83 0.98
1856 3382 5.303589 AGATGCATGCAGCCACTTTATTAAT 59.696 36.000 30.96 6.33 44.83 1.40
1857 3383 5.341872 TGCATGCAGCCACTTTATTAATT 57.658 34.783 18.46 0.00 44.83 1.40
1859 3385 7.053316 TGCATGCAGCCACTTTATTAATTAT 57.947 32.000 18.46 0.00 44.83 1.28
1860 3386 7.499292 TGCATGCAGCCACTTTATTAATTATT 58.501 30.769 18.46 0.00 44.83 1.40
1861 3387 7.652909 TGCATGCAGCCACTTTATTAATTATTC 59.347 33.333 18.46 0.00 44.83 1.75
1863 3389 8.971321 CATGCAGCCACTTTATTAATTATTCAC 58.029 33.333 0.00 0.00 0.00 3.18
1864 3390 8.060931 TGCAGCCACTTTATTAATTATTCACA 57.939 30.769 0.00 0.00 0.00 3.58
1865 3391 8.526978 TGCAGCCACTTTATTAATTATTCACAA 58.473 29.630 0.00 0.00 0.00 3.33
1906 3432 8.948631 ATACATCAATATATCTAAAGCCACCG 57.051 34.615 0.00 0.00 0.00 4.94
1907 3433 6.769512 ACATCAATATATCTAAAGCCACCGT 58.230 36.000 0.00 0.00 0.00 4.83
1908 3434 6.874134 ACATCAATATATCTAAAGCCACCGTC 59.126 38.462 0.00 0.00 0.00 4.79
1909 3435 6.413783 TCAATATATCTAAAGCCACCGTCA 57.586 37.500 0.00 0.00 0.00 4.35
1910 3436 7.004555 TCAATATATCTAAAGCCACCGTCAT 57.995 36.000 0.00 0.00 0.00 3.06
1911 3437 6.873605 TCAATATATCTAAAGCCACCGTCATG 59.126 38.462 0.00 0.00 0.00 3.07
1912 3438 1.668419 ATCTAAAGCCACCGTCATGC 58.332 50.000 0.00 0.00 0.00 4.06
1913 3439 0.613260 TCTAAAGCCACCGTCATGCT 59.387 50.000 0.00 0.00 36.79 3.79
1914 3440 1.003118 TCTAAAGCCACCGTCATGCTT 59.997 47.619 0.00 0.00 46.68 3.91
1915 3441 1.398390 CTAAAGCCACCGTCATGCTTC 59.602 52.381 0.00 0.00 44.11 3.86
1916 3442 1.244019 AAAGCCACCGTCATGCTTCC 61.244 55.000 0.00 0.00 44.11 3.46
1917 3443 2.359850 GCCACCGTCATGCTTCCA 60.360 61.111 0.00 0.00 0.00 3.53
1918 3444 1.750399 GCCACCGTCATGCTTCCAT 60.750 57.895 0.00 0.00 0.00 3.41
1920 3446 1.378882 CCACCGTCATGCTTCCATGG 61.379 60.000 4.97 4.97 47.00 3.66
1921 3447 0.677731 CACCGTCATGCTTCCATGGT 60.678 55.000 12.58 0.00 47.00 3.55
1922 3448 0.038166 ACCGTCATGCTTCCATGGTT 59.962 50.000 12.58 0.00 47.00 3.67
1923 3449 0.452987 CCGTCATGCTTCCATGGTTG 59.547 55.000 12.58 7.00 47.00 3.77
1924 3450 1.452110 CGTCATGCTTCCATGGTTGA 58.548 50.000 12.58 5.89 47.00 3.18
1925 3451 2.019249 CGTCATGCTTCCATGGTTGAT 58.981 47.619 12.58 0.00 47.00 2.57
1926 3452 3.205338 CGTCATGCTTCCATGGTTGATA 58.795 45.455 12.58 0.00 47.00 2.15
1927 3453 3.002656 CGTCATGCTTCCATGGTTGATAC 59.997 47.826 12.58 2.36 47.00 2.24
1928 3454 3.002656 GTCATGCTTCCATGGTTGATACG 59.997 47.826 12.58 0.00 47.00 3.06
1929 3455 2.036958 TGCTTCCATGGTTGATACGG 57.963 50.000 12.58 0.00 0.00 4.02
1930 3456 1.557371 TGCTTCCATGGTTGATACGGA 59.443 47.619 12.58 0.00 0.00 4.69
1931 3457 1.940613 GCTTCCATGGTTGATACGGAC 59.059 52.381 12.58 0.00 0.00 4.79
1932 3458 2.420129 GCTTCCATGGTTGATACGGACT 60.420 50.000 12.58 0.00 0.00 3.85
1933 3459 3.181469 GCTTCCATGGTTGATACGGACTA 60.181 47.826 12.58 0.00 0.00 2.59
1959 3485 1.084370 CCGATCGAAGGCCACTTGTC 61.084 60.000 18.66 0.00 36.97 3.18
1961 3487 1.079127 ATCGAAGGCCACTTGTCCG 60.079 57.895 5.01 0.00 36.97 4.79
1972 3498 2.329662 CACTTGTCCGAACACGTGTGT 61.330 52.381 24.16 12.47 45.64 3.72
1982 4063 1.646989 CACGTGTGTTGTTCGTGCG 60.647 57.895 7.58 0.00 45.66 5.34
1984 4065 0.801451 ACGTGTGTTGTTCGTGCGTA 60.801 50.000 0.00 0.00 36.46 4.42
1987 4068 0.646381 TGTGTTGTTCGTGCGTACAC 59.354 50.000 4.09 8.58 43.76 2.90
1988 4069 0.925466 GTGTTGTTCGTGCGTACACT 59.075 50.000 4.09 0.00 45.10 3.55
1990 4071 2.535166 GTGTTGTTCGTGCGTACACTTA 59.465 45.455 4.09 0.00 45.10 2.24
1994 4075 4.158020 TGTTCGTGCGTACACTTACATA 57.842 40.909 4.09 0.00 45.10 2.29
1996 4077 4.161333 GTTCGTGCGTACACTTACATAGT 58.839 43.478 4.09 0.00 45.10 2.12
1998 4079 4.897224 TCGTGCGTACACTTACATAGTAC 58.103 43.478 4.09 0.00 45.10 2.73
2010 4091 7.148340 ACACTTACATAGTACGTAGTCAACCTC 60.148 40.741 6.10 0.00 43.93 3.85
2037 4118 2.891580 GAGTCTGGACAGTGGACACTAA 59.108 50.000 4.41 0.00 40.20 2.24
2051 4132 2.735134 GACACTAAGTTGGCACGGTTAG 59.265 50.000 7.73 7.73 0.00 2.34
2065 4146 2.369532 ACGGTTAGGCTTGTCCAAACTA 59.630 45.455 0.00 0.00 37.29 2.24
2148 4231 0.679505 CCAAGAGACTTGACCCGTGA 59.320 55.000 12.25 0.00 0.00 4.35
2163 4246 5.163447 TGACCCGTGAATATCCAAGTCTAAG 60.163 44.000 0.00 0.00 0.00 2.18
2206 4294 3.382048 ACCTTTACTGGTCGACAAGTC 57.618 47.619 28.63 5.69 34.86 3.01
2213 4301 0.032130 TGGTCGACAAGTCTGCAGAC 59.968 55.000 34.82 34.82 45.08 3.51
2224 4312 0.523519 TCTGCAGACTAGCACTCACG 59.476 55.000 13.74 0.00 40.11 4.35
2225 4313 0.523519 CTGCAGACTAGCACTCACGA 59.476 55.000 8.42 0.00 40.11 4.35
2230 4318 2.747989 CAGACTAGCACTCACGAGGTAA 59.252 50.000 0.00 0.00 0.00 2.85
2233 4321 2.093106 CTAGCACTCACGAGGTAAGGT 58.907 52.381 0.00 0.00 0.00 3.50
2234 4322 2.211250 AGCACTCACGAGGTAAGGTA 57.789 50.000 0.00 0.00 0.00 3.08
2235 4323 2.522185 AGCACTCACGAGGTAAGGTAA 58.478 47.619 0.00 0.00 0.00 2.85
2236 4324 2.895404 AGCACTCACGAGGTAAGGTAAA 59.105 45.455 0.00 0.00 0.00 2.01
2237 4325 3.514309 AGCACTCACGAGGTAAGGTAAAT 59.486 43.478 0.00 0.00 0.00 1.40
2238 4326 3.617263 GCACTCACGAGGTAAGGTAAATG 59.383 47.826 0.00 0.00 0.00 2.32
2239 4327 3.617263 CACTCACGAGGTAAGGTAAATGC 59.383 47.826 0.00 0.00 0.00 3.56
2240 4328 3.195661 CTCACGAGGTAAGGTAAATGCC 58.804 50.000 0.00 0.00 0.00 4.40
2241 4329 2.568062 TCACGAGGTAAGGTAAATGCCA 59.432 45.455 0.00 0.00 0.00 4.92
2242 4330 2.676342 CACGAGGTAAGGTAAATGCCAC 59.324 50.000 0.00 0.00 0.00 5.01
2243 4331 2.570302 ACGAGGTAAGGTAAATGCCACT 59.430 45.455 0.00 0.00 0.00 4.00
2244 4332 3.195661 CGAGGTAAGGTAAATGCCACTC 58.804 50.000 0.00 0.00 0.00 3.51
2245 4333 3.195661 GAGGTAAGGTAAATGCCACTCG 58.804 50.000 0.00 0.00 0.00 4.18
2246 4334 2.835764 AGGTAAGGTAAATGCCACTCGA 59.164 45.455 0.00 0.00 0.00 4.04
2247 4335 3.454812 AGGTAAGGTAAATGCCACTCGAT 59.545 43.478 0.00 0.00 0.00 3.59
2248 4336 3.808174 GGTAAGGTAAATGCCACTCGATC 59.192 47.826 0.00 0.00 0.00 3.69
2249 4337 2.225068 AGGTAAATGCCACTCGATCG 57.775 50.000 9.36 9.36 0.00 3.69
2250 4338 1.202533 AGGTAAATGCCACTCGATCGG 60.203 52.381 16.41 8.65 0.00 4.18
2251 4339 1.472728 GGTAAATGCCACTCGATCGGT 60.473 52.381 16.41 9.34 0.00 4.69
2252 4340 1.593006 GTAAATGCCACTCGATCGGTG 59.407 52.381 22.24 22.24 34.78 4.94
2256 4344 2.509336 CCACTCGATCGGTGGCAC 60.509 66.667 30.00 9.70 45.97 5.01
2257 4345 2.261361 CACTCGATCGGTGGCACA 59.739 61.111 20.82 0.00 0.00 4.57
2271 4359 2.029518 CACACGGTGCAGCTCTCA 59.970 61.111 14.92 0.00 0.00 3.27
2272 4360 2.025969 CACACGGTGCAGCTCTCAG 61.026 63.158 14.92 0.00 0.00 3.35
2273 4361 2.203082 ACACGGTGCAGCTCTCAGA 61.203 57.895 14.92 0.00 0.00 3.27
2274 4362 1.735920 CACGGTGCAGCTCTCAGAC 60.736 63.158 14.92 0.00 0.00 3.51
2275 4363 2.203082 ACGGTGCAGCTCTCAGACA 61.203 57.895 14.92 0.00 0.00 3.41
2276 4364 1.005748 CGGTGCAGCTCTCAGACAA 60.006 57.895 14.92 0.00 0.00 3.18
2277 4365 0.601046 CGGTGCAGCTCTCAGACAAA 60.601 55.000 14.92 0.00 0.00 2.83
2278 4366 1.155042 GGTGCAGCTCTCAGACAAAG 58.845 55.000 9.07 0.00 0.00 2.77
2279 4367 1.155042 GTGCAGCTCTCAGACAAAGG 58.845 55.000 0.00 0.00 0.00 3.11
2280 4368 0.604780 TGCAGCTCTCAGACAAAGGC 60.605 55.000 0.00 0.00 0.00 4.35
2281 4369 0.321475 GCAGCTCTCAGACAAAGGCT 60.321 55.000 0.00 0.00 0.00 4.58
2282 4370 1.440708 CAGCTCTCAGACAAAGGCTG 58.559 55.000 0.00 0.00 40.52 4.85
2283 4371 1.055040 AGCTCTCAGACAAAGGCTGT 58.945 50.000 0.00 0.00 42.61 4.40
2284 4372 1.155042 GCTCTCAGACAAAGGCTGTG 58.845 55.000 2.28 2.28 38.84 3.66
2285 4373 1.155042 CTCTCAGACAAAGGCTGTGC 58.845 55.000 4.10 0.00 38.84 4.57
2295 4383 2.914097 GGCTGTGCCTGGTTGCTT 60.914 61.111 0.73 0.00 46.69 3.91
2296 4384 1.603455 GGCTGTGCCTGGTTGCTTA 60.603 57.895 0.73 0.00 46.69 3.09
2297 4385 1.178534 GGCTGTGCCTGGTTGCTTAA 61.179 55.000 0.73 0.00 46.69 1.85
2298 4386 0.890683 GCTGTGCCTGGTTGCTTAAT 59.109 50.000 0.00 0.00 0.00 1.40
2299 4387 2.091541 GCTGTGCCTGGTTGCTTAATA 58.908 47.619 0.00 0.00 0.00 0.98
2300 4388 2.159379 GCTGTGCCTGGTTGCTTAATAC 60.159 50.000 0.00 0.00 0.00 1.89
2301 4389 3.347216 CTGTGCCTGGTTGCTTAATACT 58.653 45.455 0.00 0.00 0.00 2.12
2302 4390 3.758554 CTGTGCCTGGTTGCTTAATACTT 59.241 43.478 0.00 0.00 0.00 2.24
2303 4391 4.148838 TGTGCCTGGTTGCTTAATACTTT 58.851 39.130 0.00 0.00 0.00 2.66
2304 4392 4.586841 TGTGCCTGGTTGCTTAATACTTTT 59.413 37.500 0.00 0.00 0.00 2.27
2305 4393 5.161358 GTGCCTGGTTGCTTAATACTTTTC 58.839 41.667 0.00 0.00 0.00 2.29
2306 4394 4.083003 TGCCTGGTTGCTTAATACTTTTCG 60.083 41.667 0.00 0.00 0.00 3.46
2307 4395 4.674362 GCCTGGTTGCTTAATACTTTTCGG 60.674 45.833 0.00 0.00 0.00 4.30
2308 4396 4.412207 CTGGTTGCTTAATACTTTTCGGC 58.588 43.478 0.00 0.00 0.00 5.54
2309 4397 3.191791 TGGTTGCTTAATACTTTTCGGCC 59.808 43.478 0.00 0.00 0.00 6.13
2310 4398 3.191791 GGTTGCTTAATACTTTTCGGCCA 59.808 43.478 2.24 0.00 0.00 5.36
2311 4399 4.321378 GGTTGCTTAATACTTTTCGGCCAA 60.321 41.667 2.24 0.00 0.00 4.52
2312 4400 5.407502 GTTGCTTAATACTTTTCGGCCAAT 58.592 37.500 2.24 0.00 0.00 3.16
2313 4401 5.652994 TGCTTAATACTTTTCGGCCAATT 57.347 34.783 2.24 0.00 0.00 2.32
2314 4402 6.761099 TGCTTAATACTTTTCGGCCAATTA 57.239 33.333 2.24 0.00 0.00 1.40
2315 4403 7.159322 TGCTTAATACTTTTCGGCCAATTAA 57.841 32.000 2.24 0.71 0.00 1.40
2316 4404 7.254852 TGCTTAATACTTTTCGGCCAATTAAG 58.745 34.615 2.24 10.55 38.79 1.85
2317 4405 7.121463 TGCTTAATACTTTTCGGCCAATTAAGA 59.879 33.333 18.31 1.28 38.37 2.10
2318 4406 7.431376 GCTTAATACTTTTCGGCCAATTAAGAC 59.569 37.037 18.31 11.15 38.37 3.01
2319 4407 6.827586 AATACTTTTCGGCCAATTAAGACA 57.172 33.333 2.24 0.00 0.00 3.41
2320 4408 4.766404 ACTTTTCGGCCAATTAAGACAG 57.234 40.909 2.24 0.00 0.00 3.51
2321 4409 4.142038 ACTTTTCGGCCAATTAAGACAGT 58.858 39.130 2.24 0.00 0.00 3.55
2322 4410 4.023193 ACTTTTCGGCCAATTAAGACAGTG 60.023 41.667 2.24 0.00 0.00 3.66
2323 4411 1.448985 TCGGCCAATTAAGACAGTGC 58.551 50.000 2.24 0.00 0.00 4.40
2324 4412 0.451783 CGGCCAATTAAGACAGTGCC 59.548 55.000 2.24 0.00 0.00 5.01
2325 4413 0.817654 GGCCAATTAAGACAGTGCCC 59.182 55.000 0.00 0.00 0.00 5.36
2326 4414 0.817654 GCCAATTAAGACAGTGCCCC 59.182 55.000 0.00 0.00 0.00 5.80
2327 4415 1.616994 GCCAATTAAGACAGTGCCCCT 60.617 52.381 0.00 0.00 0.00 4.79
2328 4416 2.356741 GCCAATTAAGACAGTGCCCCTA 60.357 50.000 0.00 0.00 0.00 3.53
2329 4417 3.876156 GCCAATTAAGACAGTGCCCCTAA 60.876 47.826 0.00 0.00 0.00 2.69
2330 4418 4.536765 CCAATTAAGACAGTGCCCCTAAT 58.463 43.478 0.00 0.00 0.00 1.73
2331 4419 4.580580 CCAATTAAGACAGTGCCCCTAATC 59.419 45.833 0.00 0.00 0.00 1.75
2332 4420 3.926058 TTAAGACAGTGCCCCTAATCC 57.074 47.619 0.00 0.00 0.00 3.01
2333 4421 1.668826 AAGACAGTGCCCCTAATCCA 58.331 50.000 0.00 0.00 0.00 3.41
2334 4422 1.668826 AGACAGTGCCCCTAATCCAA 58.331 50.000 0.00 0.00 0.00 3.53
2335 4423 2.208872 AGACAGTGCCCCTAATCCAAT 58.791 47.619 0.00 0.00 0.00 3.16
2336 4424 2.582636 AGACAGTGCCCCTAATCCAATT 59.417 45.455 0.00 0.00 0.00 2.32
2337 4425 2.689983 GACAGTGCCCCTAATCCAATTG 59.310 50.000 0.00 0.00 0.00 2.32
2338 4426 2.042979 ACAGTGCCCCTAATCCAATTGT 59.957 45.455 4.43 0.00 0.00 2.71
2339 4427 2.689983 CAGTGCCCCTAATCCAATTGTC 59.310 50.000 4.43 0.00 0.00 3.18
2340 4428 2.031870 GTGCCCCTAATCCAATTGTCC 58.968 52.381 4.43 0.00 0.00 4.02
2341 4429 1.929494 TGCCCCTAATCCAATTGTCCT 59.071 47.619 4.43 0.00 0.00 3.85
2342 4430 2.091885 TGCCCCTAATCCAATTGTCCTC 60.092 50.000 4.43 0.00 0.00 3.71
2343 4431 2.851195 CCCCTAATCCAATTGTCCTCG 58.149 52.381 4.43 0.00 0.00 4.63
2344 4432 2.438021 CCCCTAATCCAATTGTCCTCGA 59.562 50.000 4.43 0.00 0.00 4.04
2345 4433 3.118038 CCCCTAATCCAATTGTCCTCGAA 60.118 47.826 4.43 0.00 0.00 3.71
2346 4434 4.523083 CCCTAATCCAATTGTCCTCGAAA 58.477 43.478 4.43 0.00 0.00 3.46
2347 4435 5.133221 CCCTAATCCAATTGTCCTCGAAAT 58.867 41.667 4.43 0.00 0.00 2.17
2348 4436 5.009010 CCCTAATCCAATTGTCCTCGAAATG 59.991 44.000 4.43 0.00 0.00 2.32
2349 4437 5.590259 CCTAATCCAATTGTCCTCGAAATGT 59.410 40.000 4.43 0.00 0.00 2.71
2350 4438 6.765989 CCTAATCCAATTGTCCTCGAAATGTA 59.234 38.462 4.43 0.00 0.00 2.29
2351 4439 7.282224 CCTAATCCAATTGTCCTCGAAATGTAA 59.718 37.037 4.43 0.00 0.00 2.41
2352 4440 7.461182 AATCCAATTGTCCTCGAAATGTAAA 57.539 32.000 4.43 0.00 0.00 2.01
2353 4441 6.249035 TCCAATTGTCCTCGAAATGTAAAC 57.751 37.500 4.43 0.00 0.00 2.01
2354 4442 5.765677 TCCAATTGTCCTCGAAATGTAAACA 59.234 36.000 4.43 0.00 0.00 2.83
2355 4443 6.263392 TCCAATTGTCCTCGAAATGTAAACAA 59.737 34.615 4.43 0.00 0.00 2.83
2356 4444 6.362283 CCAATTGTCCTCGAAATGTAAACAAC 59.638 38.462 4.43 0.00 0.00 3.32
2357 4445 4.718858 TGTCCTCGAAATGTAAACAACG 57.281 40.909 0.00 0.00 0.00 4.10
2358 4446 4.370049 TGTCCTCGAAATGTAAACAACGA 58.630 39.130 0.00 0.00 0.00 3.85
2359 4447 4.809958 TGTCCTCGAAATGTAAACAACGAA 59.190 37.500 0.00 0.00 32.98 3.85
2360 4448 5.467399 TGTCCTCGAAATGTAAACAACGAAT 59.533 36.000 0.00 0.00 32.98 3.34
2361 4449 6.017770 TGTCCTCGAAATGTAAACAACGAATT 60.018 34.615 0.00 0.00 32.98 2.17
2362 4450 6.302313 GTCCTCGAAATGTAAACAACGAATTG 59.698 38.462 0.00 0.00 41.98 2.32
2363 4451 5.567534 CCTCGAAATGTAAACAACGAATTGG 59.432 40.000 0.00 0.00 40.42 3.16
2364 4452 6.301687 TCGAAATGTAAACAACGAATTGGA 57.698 33.333 0.00 0.00 40.42 3.53
2365 4453 6.726230 TCGAAATGTAAACAACGAATTGGAA 58.274 32.000 0.00 0.00 40.42 3.53
2366 4454 6.853872 TCGAAATGTAAACAACGAATTGGAAG 59.146 34.615 0.00 0.00 40.42 3.46
2367 4455 6.398517 CGAAATGTAAACAACGAATTGGAAGC 60.399 38.462 0.00 0.00 40.42 3.86
2368 4456 5.705609 ATGTAAACAACGAATTGGAAGCT 57.294 34.783 0.00 0.00 40.42 3.74
2369 4457 5.508200 TGTAAACAACGAATTGGAAGCTT 57.492 34.783 0.00 0.00 40.42 3.74
2370 4458 5.516090 TGTAAACAACGAATTGGAAGCTTC 58.484 37.500 18.54 18.54 40.42 3.86
2375 4463 2.232239 CGAATTGGAAGCTTCGTGTG 57.768 50.000 19.91 4.25 39.42 3.82
2376 4464 1.135972 CGAATTGGAAGCTTCGTGTGG 60.136 52.381 19.91 4.25 39.42 4.17
2377 4465 0.598065 AATTGGAAGCTTCGTGTGGC 59.402 50.000 19.91 5.83 0.00 5.01
2378 4466 1.244019 ATTGGAAGCTTCGTGTGGCC 61.244 55.000 19.91 5.78 0.00 5.36
2379 4467 3.423154 GGAAGCTTCGTGTGGCCG 61.423 66.667 19.91 0.00 0.00 6.13
2380 4468 4.090057 GAAGCTTCGTGTGGCCGC 62.090 66.667 11.40 10.11 0.00 6.53
2388 4476 3.423154 GTGTGGCCGCGGAGAAAG 61.423 66.667 33.48 0.01 0.00 2.62
2398 4486 4.699522 GGAGAAAGCACCGCCCGT 62.700 66.667 0.00 0.00 0.00 5.28
2399 4487 2.668550 GAGAAAGCACCGCCCGTT 60.669 61.111 0.00 0.00 0.00 4.44
2400 4488 2.203294 AGAAAGCACCGCCCGTTT 60.203 55.556 0.00 0.00 0.00 3.60
2401 4489 0.952010 GAGAAAGCACCGCCCGTTTA 60.952 55.000 0.00 0.00 0.00 2.01
2402 4490 1.208358 GAAAGCACCGCCCGTTTAC 59.792 57.895 0.00 0.00 0.00 2.01
2403 4491 1.228033 AAAGCACCGCCCGTTTACT 60.228 52.632 0.00 0.00 0.00 2.24
2404 4492 0.820482 AAAGCACCGCCCGTTTACTT 60.820 50.000 0.00 0.00 0.00 2.24
2405 4493 1.232621 AAGCACCGCCCGTTTACTTC 61.233 55.000 0.00 0.00 0.00 3.01
2406 4494 2.683859 GCACCGCCCGTTTACTTCC 61.684 63.158 0.00 0.00 0.00 3.46
2407 4495 2.036571 CACCGCCCGTTTACTTCCC 61.037 63.158 0.00 0.00 0.00 3.97
2408 4496 2.348243 CCGCCCGTTTACTTCCCA 59.652 61.111 0.00 0.00 0.00 4.37
2409 4497 1.078001 CCGCCCGTTTACTTCCCAT 60.078 57.895 0.00 0.00 0.00 4.00
2410 4498 0.678684 CCGCCCGTTTACTTCCCATT 60.679 55.000 0.00 0.00 0.00 3.16
2411 4499 1.170442 CGCCCGTTTACTTCCCATTT 58.830 50.000 0.00 0.00 0.00 2.32
2412 4500 2.358015 CGCCCGTTTACTTCCCATTTA 58.642 47.619 0.00 0.00 0.00 1.40
2413 4501 2.353579 CGCCCGTTTACTTCCCATTTAG 59.646 50.000 0.00 0.00 0.00 1.85
2414 4502 2.098607 GCCCGTTTACTTCCCATTTAGC 59.901 50.000 0.00 0.00 0.00 3.09
2415 4503 2.686405 CCCGTTTACTTCCCATTTAGCC 59.314 50.000 0.00 0.00 0.00 3.93
2416 4504 2.353579 CCGTTTACTTCCCATTTAGCCG 59.646 50.000 0.00 0.00 0.00 5.52
2417 4505 3.264104 CGTTTACTTCCCATTTAGCCGA 58.736 45.455 0.00 0.00 0.00 5.54
2418 4506 3.063045 CGTTTACTTCCCATTTAGCCGAC 59.937 47.826 0.00 0.00 0.00 4.79
2419 4507 3.985019 TTACTTCCCATTTAGCCGACA 57.015 42.857 0.00 0.00 0.00 4.35
2420 4508 2.403252 ACTTCCCATTTAGCCGACAG 57.597 50.000 0.00 0.00 0.00 3.51
2421 4509 1.065418 ACTTCCCATTTAGCCGACAGG 60.065 52.381 0.00 0.00 41.62 4.00
2422 4510 1.209504 CTTCCCATTTAGCCGACAGGA 59.790 52.381 0.00 0.00 41.02 3.86
2423 4511 0.539986 TCCCATTTAGCCGACAGGAC 59.460 55.000 0.00 0.00 41.02 3.85
2424 4512 0.541863 CCCATTTAGCCGACAGGACT 59.458 55.000 0.00 0.00 41.02 3.85
2425 4513 1.656652 CCATTTAGCCGACAGGACTG 58.343 55.000 0.00 0.00 41.02 3.51
2426 4514 1.656652 CATTTAGCCGACAGGACTGG 58.343 55.000 4.14 0.00 41.02 4.00
2430 4518 4.329545 GCCGACAGGACTGGCCAA 62.330 66.667 7.01 0.00 43.06 4.52
2431 4519 2.046892 CCGACAGGACTGGCCAAG 60.047 66.667 7.01 3.48 41.02 3.61
2432 4520 2.743928 CGACAGGACTGGCCAAGC 60.744 66.667 7.01 0.50 40.02 4.01
2433 4521 2.431683 GACAGGACTGGCCAAGCA 59.568 61.111 7.01 0.00 40.02 3.91
2434 4522 1.673665 GACAGGACTGGCCAAGCAG 60.674 63.158 7.01 0.00 40.02 4.24
2435 4523 2.116983 GACAGGACTGGCCAAGCAGA 62.117 60.000 7.01 0.00 40.02 4.26
2436 4524 1.673665 CAGGACTGGCCAAGCAGAC 60.674 63.158 7.01 0.00 40.02 3.51
2437 4525 2.743928 GGACTGGCCAAGCAGACG 60.744 66.667 7.01 0.00 36.34 4.18
2438 4526 2.743928 GACTGGCCAAGCAGACGG 60.744 66.667 7.01 0.00 0.00 4.79
2444 4532 4.473520 CCAAGCAGACGGCCGGAT 62.474 66.667 31.76 15.08 46.50 4.18
2445 4533 2.499205 CAAGCAGACGGCCGGATA 59.501 61.111 31.76 0.00 46.50 2.59
2446 4534 1.883084 CAAGCAGACGGCCGGATAC 60.883 63.158 31.76 16.21 46.50 2.24
2447 4535 2.355986 AAGCAGACGGCCGGATACA 61.356 57.895 31.76 0.00 46.50 2.29
2448 4536 1.895020 AAGCAGACGGCCGGATACAA 61.895 55.000 31.76 0.00 46.50 2.41
2449 4537 1.448893 GCAGACGGCCGGATACAAA 60.449 57.895 31.76 0.00 36.11 2.83
2450 4538 1.429148 GCAGACGGCCGGATACAAAG 61.429 60.000 31.76 10.90 36.11 2.77
2451 4539 1.153429 AGACGGCCGGATACAAAGC 60.153 57.895 31.76 6.61 0.00 3.51
2452 4540 1.153429 GACGGCCGGATACAAAGCT 60.153 57.895 31.76 3.06 0.00 3.74
2453 4541 0.743345 GACGGCCGGATACAAAGCTT 60.743 55.000 31.76 2.41 0.00 3.74
2454 4542 0.322187 ACGGCCGGATACAAAGCTTT 60.322 50.000 31.76 5.69 0.00 3.51
2455 4543 1.065998 ACGGCCGGATACAAAGCTTTA 60.066 47.619 31.76 0.00 0.00 1.85
2456 4544 1.597663 CGGCCGGATACAAAGCTTTAG 59.402 52.381 20.10 9.05 0.00 1.85
2457 4545 1.947456 GGCCGGATACAAAGCTTTAGG 59.053 52.381 12.25 9.50 0.00 2.69
2458 4546 2.640184 GCCGGATACAAAGCTTTAGGT 58.360 47.619 12.25 9.35 0.00 3.08
2459 4547 2.612672 GCCGGATACAAAGCTTTAGGTC 59.387 50.000 12.25 9.51 0.00 3.85
2460 4548 3.203716 CCGGATACAAAGCTTTAGGTCC 58.796 50.000 12.25 16.51 0.00 4.46
2461 4549 3.118371 CCGGATACAAAGCTTTAGGTCCT 60.118 47.826 22.87 0.00 0.00 3.85
2462 4550 4.100498 CCGGATACAAAGCTTTAGGTCCTA 59.900 45.833 22.87 0.00 0.00 2.94
2463 4551 5.048507 CGGATACAAAGCTTTAGGTCCTAC 58.951 45.833 22.87 8.39 0.00 3.18
2464 4552 5.163437 CGGATACAAAGCTTTAGGTCCTACT 60.163 44.000 22.87 0.00 0.00 2.57
2465 4553 6.282167 GGATACAAAGCTTTAGGTCCTACTC 58.718 44.000 12.25 0.00 0.00 2.59
2466 4554 6.127140 GGATACAAAGCTTTAGGTCCTACTCA 60.127 42.308 12.25 0.00 0.00 3.41
2467 4555 5.763876 ACAAAGCTTTAGGTCCTACTCAT 57.236 39.130 12.25 0.00 0.00 2.90
2468 4556 5.491982 ACAAAGCTTTAGGTCCTACTCATG 58.508 41.667 12.25 0.00 0.00 3.07
2469 4557 4.762289 AAGCTTTAGGTCCTACTCATGG 57.238 45.455 0.00 0.00 0.00 3.66
2470 4558 3.725634 AGCTTTAGGTCCTACTCATGGT 58.274 45.455 0.00 0.00 0.00 3.55
2471 4559 3.452627 AGCTTTAGGTCCTACTCATGGTG 59.547 47.826 0.00 0.00 0.00 4.17
2472 4560 3.798202 CTTTAGGTCCTACTCATGGTGC 58.202 50.000 0.00 0.00 0.00 5.01
2473 4561 2.543037 TAGGTCCTACTCATGGTGCA 57.457 50.000 0.00 0.00 0.00 4.57
2474 4562 1.885049 AGGTCCTACTCATGGTGCAT 58.115 50.000 0.00 0.00 0.00 3.96
2475 4563 1.487976 AGGTCCTACTCATGGTGCATG 59.512 52.381 0.00 0.00 42.60 4.06
2476 4564 1.210478 GGTCCTACTCATGGTGCATGT 59.790 52.381 0.00 0.00 41.98 3.21
2477 4565 2.283298 GTCCTACTCATGGTGCATGTG 58.717 52.381 0.00 0.00 41.98 3.21
2478 4566 1.019673 CCTACTCATGGTGCATGTGC 58.980 55.000 0.00 0.00 41.98 4.57
2479 4567 0.654160 CTACTCATGGTGCATGTGCG 59.346 55.000 0.00 0.00 45.83 5.34
2480 4568 0.744057 TACTCATGGTGCATGTGCGG 60.744 55.000 0.00 0.00 45.83 5.69
2481 4569 3.405592 CTCATGGTGCATGTGCGGC 62.406 63.158 0.00 0.00 45.83 6.53
2482 4570 4.840288 CATGGTGCATGTGCGGCG 62.840 66.667 0.51 0.51 45.83 6.46
2496 4584 3.177249 GGCGACGTCCGTGCTTAC 61.177 66.667 10.58 0.00 41.15 2.34
2497 4585 2.429571 GCGACGTCCGTGCTTACA 60.430 61.111 10.58 0.00 41.15 2.41
2498 4586 1.804326 GCGACGTCCGTGCTTACAT 60.804 57.895 10.58 0.00 41.15 2.29
2499 4587 1.988409 CGACGTCCGTGCTTACATG 59.012 57.895 10.58 0.00 0.00 3.21
2500 4588 1.708027 GACGTCCGTGCTTACATGC 59.292 57.895 3.51 0.00 0.00 4.06
2501 4589 0.736325 GACGTCCGTGCTTACATGCT 60.736 55.000 3.51 0.00 0.00 3.79
2502 4590 0.736325 ACGTCCGTGCTTACATGCTC 60.736 55.000 0.00 0.00 0.00 4.26
2503 4591 0.458543 CGTCCGTGCTTACATGCTCT 60.459 55.000 0.00 0.00 0.00 4.09
2504 4592 1.202256 CGTCCGTGCTTACATGCTCTA 60.202 52.381 0.00 0.00 0.00 2.43
2505 4593 2.194271 GTCCGTGCTTACATGCTCTAC 58.806 52.381 0.00 0.00 0.00 2.59
2506 4594 1.136305 TCCGTGCTTACATGCTCTACC 59.864 52.381 0.00 0.00 0.00 3.18
2507 4595 1.137086 CCGTGCTTACATGCTCTACCT 59.863 52.381 0.00 0.00 0.00 3.08
2508 4596 2.464865 CGTGCTTACATGCTCTACCTC 58.535 52.381 0.00 0.00 0.00 3.85
2509 4597 2.099921 CGTGCTTACATGCTCTACCTCT 59.900 50.000 0.00 0.00 0.00 3.69
2510 4598 3.712187 GTGCTTACATGCTCTACCTCTC 58.288 50.000 0.00 0.00 0.00 3.20
2511 4599 3.131223 GTGCTTACATGCTCTACCTCTCA 59.869 47.826 0.00 0.00 0.00 3.27
2512 4600 3.963374 TGCTTACATGCTCTACCTCTCAT 59.037 43.478 0.00 0.00 0.00 2.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 9.628746 TGTTCTAGAACCAAAACAAAAGTTTAC 57.371 29.630 28.43 2.75 40.46 2.01
44 45 4.385825 AGCGATGTTCTAGAACCAAAACA 58.614 39.130 28.43 13.32 40.46 2.83
49 50 1.134367 CCGAGCGATGTTCTAGAACCA 59.866 52.381 28.43 18.36 40.46 3.67
92 93 1.205655 CTTGGAGCCTTGAGATCACGA 59.794 52.381 0.00 0.00 0.00 4.35
134 135 9.475620 AAGTAAACTAAAATCAAATCCCTAGGG 57.524 33.333 23.22 23.22 0.00 3.53
232 254 6.487668 TGCGTGATCATTGATCCAATCTATTT 59.512 34.615 21.08 0.00 38.20 1.40
241 274 2.286294 GTCACTGCGTGATCATTGATCC 59.714 50.000 21.08 12.69 44.63 3.36
251 284 2.027024 GGTGACGTCACTGCGTGA 59.973 61.111 39.01 6.25 45.79 4.35
257 290 3.132111 TGCACATATATGGTGACGTCACT 59.868 43.478 39.01 26.95 45.73 3.41
288 321 5.753921 GGGACACAAGTAGATTAGCACATAC 59.246 44.000 0.00 0.00 0.00 2.39
434 475 3.345414 GGTCGTGACTCGGGAGATATAT 58.655 50.000 2.08 0.00 40.32 0.86
436 477 1.606903 GGTCGTGACTCGGGAGATAT 58.393 55.000 2.08 0.00 40.32 1.63
438 479 2.113433 CGGTCGTGACTCGGGAGAT 61.113 63.158 2.08 0.00 40.32 2.75
439 480 2.745100 CGGTCGTGACTCGGGAGA 60.745 66.667 2.08 0.00 40.32 3.71
440 481 3.054503 ACGGTCGTGACTCGGGAG 61.055 66.667 12.95 0.00 40.32 4.30
591 665 8.579850 AGATGCTAATCAGTCCAAAACATTAA 57.420 30.769 0.00 0.00 35.03 1.40
592 666 8.579850 AAGATGCTAATCAGTCCAAAACATTA 57.420 30.769 0.00 0.00 35.03 1.90
593 667 7.472334 AAGATGCTAATCAGTCCAAAACATT 57.528 32.000 0.00 0.00 35.03 2.71
594 668 7.472334 AAAGATGCTAATCAGTCCAAAACAT 57.528 32.000 0.00 0.00 35.03 2.71
595 669 6.899393 AAAGATGCTAATCAGTCCAAAACA 57.101 33.333 0.00 0.00 35.03 2.83
612 686 1.825090 TGCACCTGCCACTAAAGATG 58.175 50.000 0.00 0.00 41.18 2.90
620 698 1.737793 GTACAAGTATGCACCTGCCAC 59.262 52.381 0.00 0.00 41.18 5.01
626 704 6.096564 AGAGGTTACTAGTACAAGTATGCACC 59.903 42.308 0.91 4.39 33.39 5.01
631 709 9.418839 CCCTAAAGAGGTTACTAGTACAAGTAT 57.581 37.037 0.91 0.00 41.95 2.12
632 710 7.836183 CCCCTAAAGAGGTTACTAGTACAAGTA 59.164 40.741 0.91 0.00 41.95 2.24
634 712 6.406737 GCCCCTAAAGAGGTTACTAGTACAAG 60.407 46.154 0.91 0.00 41.95 3.16
635 713 5.423290 GCCCCTAAAGAGGTTACTAGTACAA 59.577 44.000 0.91 0.00 41.95 2.41
636 714 4.958581 GCCCCTAAAGAGGTTACTAGTACA 59.041 45.833 0.91 0.00 41.95 2.90
637 715 4.958581 TGCCCCTAAAGAGGTTACTAGTAC 59.041 45.833 0.91 0.00 41.95 2.73
689 810 3.005261 CGCAGCTTGTATCCTATCTCAGT 59.995 47.826 0.00 0.00 0.00 3.41
690 811 3.573598 CGCAGCTTGTATCCTATCTCAG 58.426 50.000 0.00 0.00 0.00 3.35
823 963 6.456988 GCAAACTAAACGCATATCTAGCTTGT 60.457 38.462 0.00 0.00 0.00 3.16
947 1415 2.683867 TCGTAGACTTCCAGCTAGCTTC 59.316 50.000 16.46 10.04 0.00 3.86
1083 1574 0.803117 CTGAGTCCGCTGAAGTCGTA 59.197 55.000 0.00 0.00 0.00 3.43
1286 1780 1.561643 TCTCCGTTCTCTGATTGCCT 58.438 50.000 0.00 0.00 0.00 4.75
1290 1784 2.164624 CCGTCTTCTCCGTTCTCTGATT 59.835 50.000 0.00 0.00 0.00 2.57
1430 1948 1.796190 CTGATCCGGCAGTAGCGCTA 61.796 60.000 14.45 14.45 43.41 4.26
1431 1949 3.144120 CTGATCCGGCAGTAGCGCT 62.144 63.158 17.26 17.26 43.41 5.92
1517 2077 0.828022 TGCCGGAGAAATGGACGTAT 59.172 50.000 5.05 0.00 0.00 3.06
1520 2080 1.094785 ATTTGCCGGAGAAATGGACG 58.905 50.000 5.05 0.00 0.00 4.79
1523 2083 4.620982 GGAATTATTTGCCGGAGAAATGG 58.379 43.478 5.05 0.00 0.00 3.16
1524 2084 4.036262 TCGGAATTATTTGCCGGAGAAATG 59.964 41.667 5.05 0.00 44.87 2.32
1525 2085 4.204012 TCGGAATTATTTGCCGGAGAAAT 58.796 39.130 5.05 11.41 44.87 2.17
1527 2087 3.269538 TCGGAATTATTTGCCGGAGAA 57.730 42.857 5.05 0.00 44.87 2.87
1528 2088 2.992124 TCGGAATTATTTGCCGGAGA 57.008 45.000 5.05 0.00 44.87 3.71
1529 2089 4.095782 TCTTTTCGGAATTATTTGCCGGAG 59.904 41.667 5.05 0.00 44.87 4.63
1530 2090 4.011023 TCTTTTCGGAATTATTTGCCGGA 58.989 39.130 5.05 0.00 44.87 5.14
1531 2091 4.351192 CTCTTTTCGGAATTATTTGCCGG 58.649 43.478 0.00 0.00 44.87 6.13
1532 2092 4.351192 CCTCTTTTCGGAATTATTTGCCG 58.649 43.478 0.00 0.00 46.08 5.69
1533 2093 4.401202 TCCCTCTTTTCGGAATTATTTGCC 59.599 41.667 0.00 0.00 0.00 4.52
1534 2094 5.125578 ACTCCCTCTTTTCGGAATTATTTGC 59.874 40.000 0.00 0.00 0.00 3.68
1545 2393 6.072838 TGCGTAGTATATACTCCCTCTTTTCG 60.073 42.308 18.68 11.04 37.73 3.46
1608 2472 7.255569 TGAATGAAGAATGATGCTAAGCAAAG 58.744 34.615 0.00 0.00 43.62 2.77
1615 2479 5.884232 AGTTGCTGAATGAAGAATGATGCTA 59.116 36.000 0.00 0.00 0.00 3.49
1618 2482 6.617879 TCAAGTTGCTGAATGAAGAATGATG 58.382 36.000 0.00 0.00 0.00 3.07
1622 2486 8.571461 TTAGATCAAGTTGCTGAATGAAGAAT 57.429 30.769 0.00 0.00 0.00 2.40
1667 3193 1.359848 GTCGAACCGCAATCTGATGT 58.640 50.000 0.00 0.00 0.00 3.06
1750 3276 5.648092 GGAAACATATATAGGTCACCCATGC 59.352 44.000 0.00 0.00 0.00 4.06
1786 3312 5.245977 GGGTCATCCTCATTTTCTGGAAAAA 59.754 40.000 11.69 0.00 42.71 1.94
1787 3313 4.772100 GGGTCATCCTCATTTTCTGGAAAA 59.228 41.667 10.33 10.33 43.48 2.29
1789 3315 3.309121 GGGGTCATCCTCATTTTCTGGAA 60.309 47.826 0.00 0.00 33.58 3.53
1790 3316 2.242196 GGGGTCATCCTCATTTTCTGGA 59.758 50.000 0.00 0.00 33.58 3.86
1792 3318 2.659428 GGGGGTCATCCTCATTTTCTG 58.341 52.381 0.00 0.00 35.50 3.02
1793 3319 1.212935 CGGGGGTCATCCTCATTTTCT 59.787 52.381 0.00 0.00 35.01 2.52
1794 3320 1.680338 CGGGGGTCATCCTCATTTTC 58.320 55.000 0.00 0.00 35.01 2.29
1796 3322 1.645402 CCCGGGGGTCATCCTCATTT 61.645 60.000 14.71 0.00 35.01 2.32
1797 3323 2.078665 CCCGGGGGTCATCCTCATT 61.079 63.158 14.71 0.00 35.01 2.57
1798 3324 2.448542 CCCGGGGGTCATCCTCAT 60.449 66.667 14.71 0.00 35.01 2.90
1806 3332 4.153330 TAGAGAGGCCCGGGGGTC 62.153 72.222 25.28 5.09 40.91 4.46
1807 3333 4.477119 GTAGAGAGGCCCGGGGGT 62.477 72.222 25.28 0.00 37.65 4.95
1808 3334 3.776016 ATGTAGAGAGGCCCGGGGG 62.776 68.421 25.28 2.24 38.57 5.40
1809 3335 2.122813 ATGTAGAGAGGCCCGGGG 60.123 66.667 25.28 9.31 0.00 5.73
1810 3336 1.152440 AGATGTAGAGAGGCCCGGG 60.152 63.158 19.09 19.09 0.00 5.73
1812 3338 0.468214 TCCAGATGTAGAGAGGCCCG 60.468 60.000 0.00 0.00 0.00 6.13
1813 3339 1.691434 CTTCCAGATGTAGAGAGGCCC 59.309 57.143 0.00 0.00 0.00 5.80
1814 3340 2.672098 TCTTCCAGATGTAGAGAGGCC 58.328 52.381 0.00 0.00 0.00 5.19
1815 3341 4.255833 CATCTTCCAGATGTAGAGAGGC 57.744 50.000 5.69 0.00 45.33 4.70
1825 3351 1.319541 GCTGCATGCATCTTCCAGAT 58.680 50.000 22.97 0.00 42.31 2.90
1826 3352 0.750546 GGCTGCATGCATCTTCCAGA 60.751 55.000 22.97 0.00 45.15 3.86
1827 3353 1.035385 TGGCTGCATGCATCTTCCAG 61.035 55.000 22.97 8.76 45.15 3.86
1828 3354 1.000646 TGGCTGCATGCATCTTCCA 60.001 52.632 22.97 21.25 45.15 3.53
1829 3355 1.035932 AGTGGCTGCATGCATCTTCC 61.036 55.000 22.97 19.03 45.15 3.46
1830 3356 0.815734 AAGTGGCTGCATGCATCTTC 59.184 50.000 22.97 13.62 45.15 2.87
1831 3357 1.263356 AAAGTGGCTGCATGCATCTT 58.737 45.000 22.97 18.67 45.15 2.40
1832 3358 2.133281 TAAAGTGGCTGCATGCATCT 57.867 45.000 22.97 14.03 45.15 2.90
1833 3359 3.447918 AATAAAGTGGCTGCATGCATC 57.552 42.857 22.97 17.75 45.15 3.91
1834 3360 5.540400 ATTAATAAAGTGGCTGCATGCAT 57.460 34.783 22.97 6.91 45.15 3.96
1835 3361 5.341872 AATTAATAAAGTGGCTGCATGCA 57.658 34.783 21.29 21.29 45.15 3.96
1836 3362 7.652909 TGAATAATTAATAAAGTGGCTGCATGC 59.347 33.333 11.82 11.82 41.94 4.06
1837 3363 8.971321 GTGAATAATTAATAAAGTGGCTGCATG 58.029 33.333 0.50 0.00 0.00 4.06
1838 3364 8.694540 TGTGAATAATTAATAAAGTGGCTGCAT 58.305 29.630 0.50 0.00 0.00 3.96
1839 3365 8.060931 TGTGAATAATTAATAAAGTGGCTGCA 57.939 30.769 0.50 0.00 0.00 4.41
1840 3366 8.925161 TTGTGAATAATTAATAAAGTGGCTGC 57.075 30.769 0.00 0.00 0.00 5.25
1880 3406 9.383519 CGGTGGCTTTAGATATATTGATGTATT 57.616 33.333 0.00 0.00 0.00 1.89
1881 3407 8.540388 ACGGTGGCTTTAGATATATTGATGTAT 58.460 33.333 0.00 0.00 0.00 2.29
1882 3408 7.903145 ACGGTGGCTTTAGATATATTGATGTA 58.097 34.615 0.00 0.00 0.00 2.29
1883 3409 6.769512 ACGGTGGCTTTAGATATATTGATGT 58.230 36.000 0.00 0.00 0.00 3.06
1884 3410 6.873605 TGACGGTGGCTTTAGATATATTGATG 59.126 38.462 0.00 0.00 0.00 3.07
1885 3411 7.004555 TGACGGTGGCTTTAGATATATTGAT 57.995 36.000 0.00 0.00 0.00 2.57
1886 3412 6.413783 TGACGGTGGCTTTAGATATATTGA 57.586 37.500 0.00 0.00 0.00 2.57
1887 3413 6.402550 GCATGACGGTGGCTTTAGATATATTG 60.403 42.308 0.00 0.00 0.00 1.90
1888 3414 5.643777 GCATGACGGTGGCTTTAGATATATT 59.356 40.000 0.00 0.00 0.00 1.28
1889 3415 5.046304 AGCATGACGGTGGCTTTAGATATAT 60.046 40.000 0.00 0.00 33.21 0.86
1890 3416 4.283467 AGCATGACGGTGGCTTTAGATATA 59.717 41.667 0.00 0.00 33.21 0.86
1891 3417 3.071602 AGCATGACGGTGGCTTTAGATAT 59.928 43.478 0.00 0.00 33.21 1.63
1892 3418 2.434336 AGCATGACGGTGGCTTTAGATA 59.566 45.455 0.00 0.00 33.21 1.98
1893 3419 1.210478 AGCATGACGGTGGCTTTAGAT 59.790 47.619 0.00 0.00 33.21 1.98
1894 3420 0.613260 AGCATGACGGTGGCTTTAGA 59.387 50.000 0.00 0.00 33.21 2.10
1895 3421 1.398390 GAAGCATGACGGTGGCTTTAG 59.602 52.381 11.17 0.00 47.00 1.85
1896 3422 1.448985 GAAGCATGACGGTGGCTTTA 58.551 50.000 11.17 0.00 47.00 1.85
1897 3423 1.244019 GGAAGCATGACGGTGGCTTT 61.244 55.000 11.17 0.00 47.00 3.51
1899 3425 2.045926 GGAAGCATGACGGTGGCT 60.046 61.111 0.00 0.00 40.14 4.75
1900 3426 1.750399 ATGGAAGCATGACGGTGGC 60.750 57.895 0.00 0.00 0.00 5.01
1901 3427 1.378882 CCATGGAAGCATGACGGTGG 61.379 60.000 5.56 0.00 34.66 4.61
1902 3428 0.677731 ACCATGGAAGCATGACGGTG 60.678 55.000 21.47 0.00 34.66 4.94
1903 3429 0.038166 AACCATGGAAGCATGACGGT 59.962 50.000 21.47 0.00 34.66 4.83
1904 3430 0.452987 CAACCATGGAAGCATGACGG 59.547 55.000 21.47 0.00 34.66 4.79
1905 3431 1.452110 TCAACCATGGAAGCATGACG 58.548 50.000 21.47 0.00 34.66 4.35
1906 3432 3.002656 CGTATCAACCATGGAAGCATGAC 59.997 47.826 21.47 6.34 34.66 3.06
1907 3433 3.205338 CGTATCAACCATGGAAGCATGA 58.795 45.455 21.47 14.07 34.66 3.07
1908 3434 2.291465 CCGTATCAACCATGGAAGCATG 59.709 50.000 21.47 9.12 0.00 4.06
1909 3435 2.172505 TCCGTATCAACCATGGAAGCAT 59.827 45.455 21.47 7.09 0.00 3.79
1910 3436 1.557371 TCCGTATCAACCATGGAAGCA 59.443 47.619 21.47 0.00 0.00 3.91
1911 3437 1.940613 GTCCGTATCAACCATGGAAGC 59.059 52.381 21.47 1.22 32.88 3.86
1912 3438 3.543680 AGTCCGTATCAACCATGGAAG 57.456 47.619 21.47 10.43 32.88 3.46
1913 3439 4.028131 ACTAGTCCGTATCAACCATGGAA 58.972 43.478 21.47 3.46 32.88 3.53
1914 3440 3.638860 ACTAGTCCGTATCAACCATGGA 58.361 45.455 21.47 0.00 0.00 3.41
1915 3441 4.402056 AACTAGTCCGTATCAACCATGG 57.598 45.455 11.19 11.19 0.00 3.66
1916 3442 4.982916 GCTAACTAGTCCGTATCAACCATG 59.017 45.833 0.00 0.00 0.00 3.66
1917 3443 4.038883 GGCTAACTAGTCCGTATCAACCAT 59.961 45.833 0.00 0.00 0.00 3.55
1918 3444 3.382546 GGCTAACTAGTCCGTATCAACCA 59.617 47.826 0.00 0.00 0.00 3.67
1919 3445 3.243670 GGGCTAACTAGTCCGTATCAACC 60.244 52.174 0.00 0.00 38.47 3.77
1920 3446 3.974912 GGGCTAACTAGTCCGTATCAAC 58.025 50.000 0.00 0.00 38.47 3.18
1928 3454 1.602311 TCGATCGGGCTAACTAGTCC 58.398 55.000 16.41 0.00 44.60 3.85
1929 3455 2.030981 CCTTCGATCGGGCTAACTAGTC 60.031 54.545 16.41 0.00 0.00 2.59
1930 3456 1.955080 CCTTCGATCGGGCTAACTAGT 59.045 52.381 16.41 0.00 0.00 2.57
1931 3457 1.336056 GCCTTCGATCGGGCTAACTAG 60.336 57.143 23.23 6.37 44.48 2.57
1932 3458 0.672342 GCCTTCGATCGGGCTAACTA 59.328 55.000 23.23 0.00 44.48 2.24
1933 3459 1.442148 GCCTTCGATCGGGCTAACT 59.558 57.895 23.23 0.00 44.48 2.24
1982 4063 7.905493 GGTTGACTACGTACTATGTAAGTGTAC 59.095 40.741 6.57 0.00 39.39 2.90
1984 4065 6.656693 AGGTTGACTACGTACTATGTAAGTGT 59.343 38.462 6.57 3.72 39.39 3.55
1987 4068 6.541641 AGGAGGTTGACTACGTACTATGTAAG 59.458 42.308 0.00 0.00 34.05 2.34
1988 4069 6.418101 AGGAGGTTGACTACGTACTATGTAA 58.582 40.000 0.00 0.00 34.05 2.41
1990 4071 4.853007 AGGAGGTTGACTACGTACTATGT 58.147 43.478 0.00 0.00 34.05 2.29
1994 4075 2.354259 CGAGGAGGTTGACTACGTACT 58.646 52.381 0.00 0.00 38.51 2.73
1996 4077 1.089920 GCGAGGAGGTTGACTACGTA 58.910 55.000 0.00 0.00 34.15 3.57
1998 4079 1.226323 CGCGAGGAGGTTGACTACG 60.226 63.158 0.00 0.00 34.15 3.51
2001 4082 3.279183 CTCGCGAGGAGGTTGACT 58.721 61.111 28.40 0.00 39.22 3.41
2010 4091 2.336478 ACTGTCCAGACTCGCGAGG 61.336 63.158 36.93 22.24 0.00 4.63
2037 4118 0.889186 CAAGCCTAACCGTGCCAACT 60.889 55.000 0.00 0.00 0.00 3.16
2051 4132 1.454201 GCTCCTAGTTTGGACAAGCC 58.546 55.000 0.00 0.00 31.94 4.35
2065 4146 2.286872 CAGATTCATCTTTGCGCTCCT 58.713 47.619 9.73 0.00 34.22 3.69
2124 4207 2.224305 CGGGTCAAGTCTCTTGGTCTTT 60.224 50.000 9.18 0.00 0.00 2.52
2148 4231 7.039722 TCCAAAACCCTTAGACTTGGATATT 57.960 36.000 0.00 0.00 40.41 1.28
2163 4246 7.290014 AGGTATTATCCAATCAATCCAAAACCC 59.710 37.037 0.00 0.00 0.00 4.11
2173 4256 7.713507 CGACCAGTAAAGGTATTATCCAATCAA 59.286 37.037 0.00 0.00 43.38 2.57
2206 4294 0.523519 TCGTGAGTGCTAGTCTGCAG 59.476 55.000 7.63 7.63 44.20 4.41
2213 4301 2.093106 ACCTTACCTCGTGAGTGCTAG 58.907 52.381 0.00 0.00 0.00 3.42
2224 4312 3.118884 TCGAGTGGCATTTACCTTACCTC 60.119 47.826 0.00 0.00 0.00 3.85
2225 4313 2.835764 TCGAGTGGCATTTACCTTACCT 59.164 45.455 0.00 0.00 0.00 3.08
2230 4318 1.202533 CCGATCGAGTGGCATTTACCT 60.203 52.381 18.66 0.00 0.00 3.08
2233 4321 1.934589 CACCGATCGAGTGGCATTTA 58.065 50.000 18.66 0.00 0.00 1.40
2234 4322 2.767536 CACCGATCGAGTGGCATTT 58.232 52.632 18.66 0.00 0.00 2.32
2235 4323 4.521075 CACCGATCGAGTGGCATT 57.479 55.556 18.66 0.00 0.00 3.56
2240 4328 2.094659 GTGTGCCACCGATCGAGTG 61.095 63.158 18.66 20.95 34.91 3.51
2241 4329 2.261671 GTGTGCCACCGATCGAGT 59.738 61.111 18.66 10.13 0.00 4.18
2242 4330 2.880879 CGTGTGCCACCGATCGAG 60.881 66.667 18.66 9.42 0.00 4.04
2243 4331 4.429212 CCGTGTGCCACCGATCGA 62.429 66.667 18.66 0.00 0.00 3.59
2244 4332 4.735132 ACCGTGTGCCACCGATCG 62.735 66.667 8.51 8.51 0.00 3.69
2245 4333 3.118454 CACCGTGTGCCACCGATC 61.118 66.667 7.20 0.00 0.00 3.69
2254 4342 2.025969 CTGAGAGCTGCACCGTGTG 61.026 63.158 1.02 0.25 36.51 3.82
2255 4343 2.203082 TCTGAGAGCTGCACCGTGT 61.203 57.895 1.02 0.00 0.00 4.49
2256 4344 1.735920 GTCTGAGAGCTGCACCGTG 60.736 63.158 1.02 0.00 0.00 4.94
2257 4345 1.748329 TTGTCTGAGAGCTGCACCGT 61.748 55.000 1.02 0.00 0.00 4.83
2258 4346 0.601046 TTTGTCTGAGAGCTGCACCG 60.601 55.000 1.02 0.00 0.00 4.94
2259 4347 1.155042 CTTTGTCTGAGAGCTGCACC 58.845 55.000 1.02 0.00 0.00 5.01
2260 4348 1.155042 CCTTTGTCTGAGAGCTGCAC 58.845 55.000 1.02 0.00 0.00 4.57
2261 4349 0.604780 GCCTTTGTCTGAGAGCTGCA 60.605 55.000 1.02 0.00 0.00 4.41
2262 4350 0.321475 AGCCTTTGTCTGAGAGCTGC 60.321 55.000 0.00 0.00 0.00 5.25
2263 4351 1.440708 CAGCCTTTGTCTGAGAGCTG 58.559 55.000 6.30 6.30 41.43 4.24
2264 4352 1.055040 ACAGCCTTTGTCTGAGAGCT 58.945 50.000 0.00 0.00 33.87 4.09
2265 4353 1.155042 CACAGCCTTTGTCTGAGAGC 58.845 55.000 0.00 0.00 38.16 4.09
2266 4354 1.155042 GCACAGCCTTTGTCTGAGAG 58.845 55.000 0.00 0.00 38.16 3.20
2267 4355 0.250467 GGCACAGCCTTTGTCTGAGA 60.250 55.000 0.00 0.00 46.69 3.27
2268 4356 2.251600 GGCACAGCCTTTGTCTGAG 58.748 57.895 0.00 0.00 46.69 3.35
2269 4357 4.481195 GGCACAGCCTTTGTCTGA 57.519 55.556 0.00 0.00 46.69 3.27
2279 4367 0.890683 ATTAAGCAACCAGGCACAGC 59.109 50.000 0.00 0.00 35.83 4.40
2280 4368 3.347216 AGTATTAAGCAACCAGGCACAG 58.653 45.455 0.00 0.00 35.83 3.66
2281 4369 3.433306 AGTATTAAGCAACCAGGCACA 57.567 42.857 0.00 0.00 35.83 4.57
2282 4370 4.783764 AAAGTATTAAGCAACCAGGCAC 57.216 40.909 0.00 0.00 35.83 5.01
2283 4371 4.083003 CGAAAAGTATTAAGCAACCAGGCA 60.083 41.667 0.00 0.00 35.83 4.75
2284 4372 4.412207 CGAAAAGTATTAAGCAACCAGGC 58.588 43.478 0.00 0.00 0.00 4.85
2285 4373 4.674362 GCCGAAAAGTATTAAGCAACCAGG 60.674 45.833 0.00 0.00 0.00 4.45
2286 4374 4.412207 GCCGAAAAGTATTAAGCAACCAG 58.588 43.478 0.00 0.00 0.00 4.00
2287 4375 3.191791 GGCCGAAAAGTATTAAGCAACCA 59.808 43.478 0.00 0.00 0.00 3.67
2288 4376 3.191791 TGGCCGAAAAGTATTAAGCAACC 59.808 43.478 0.00 0.00 0.00 3.77
2289 4377 4.428615 TGGCCGAAAAGTATTAAGCAAC 57.571 40.909 0.00 0.00 0.00 4.17
2290 4378 5.652994 ATTGGCCGAAAAGTATTAAGCAA 57.347 34.783 0.00 0.00 0.00 3.91
2291 4379 5.652994 AATTGGCCGAAAAGTATTAAGCA 57.347 34.783 0.00 0.00 0.00 3.91
2292 4380 7.431376 GTCTTAATTGGCCGAAAAGTATTAAGC 59.569 37.037 13.47 7.77 36.35 3.09
2293 4381 8.455682 TGTCTTAATTGGCCGAAAAGTATTAAG 58.544 33.333 14.94 13.73 37.11 1.85
2294 4382 8.338072 TGTCTTAATTGGCCGAAAAGTATTAA 57.662 30.769 14.94 6.29 0.00 1.40
2295 4383 7.608761 ACTGTCTTAATTGGCCGAAAAGTATTA 59.391 33.333 14.94 0.00 0.00 0.98
2296 4384 6.433093 ACTGTCTTAATTGGCCGAAAAGTATT 59.567 34.615 14.94 0.00 0.00 1.89
2297 4385 5.944007 ACTGTCTTAATTGGCCGAAAAGTAT 59.056 36.000 14.94 1.73 0.00 2.12
2298 4386 5.180492 CACTGTCTTAATTGGCCGAAAAGTA 59.820 40.000 14.94 0.00 0.00 2.24
2299 4387 4.023193 CACTGTCTTAATTGGCCGAAAAGT 60.023 41.667 14.94 0.00 0.00 2.66
2300 4388 4.475944 CACTGTCTTAATTGGCCGAAAAG 58.524 43.478 10.85 10.85 0.00 2.27
2301 4389 3.305064 GCACTGTCTTAATTGGCCGAAAA 60.305 43.478 0.00 0.00 0.00 2.29
2302 4390 2.227865 GCACTGTCTTAATTGGCCGAAA 59.772 45.455 0.00 0.00 0.00 3.46
2303 4391 1.810151 GCACTGTCTTAATTGGCCGAA 59.190 47.619 0.00 0.00 0.00 4.30
2304 4392 1.448985 GCACTGTCTTAATTGGCCGA 58.551 50.000 0.00 0.00 0.00 5.54
2305 4393 0.451783 GGCACTGTCTTAATTGGCCG 59.548 55.000 0.00 0.00 0.00 6.13
2306 4394 0.817654 GGGCACTGTCTTAATTGGCC 59.182 55.000 0.00 0.00 46.20 5.36
2307 4395 0.817654 GGGGCACTGTCTTAATTGGC 59.182 55.000 0.00 0.00 0.00 4.52
2308 4396 2.514458 AGGGGCACTGTCTTAATTGG 57.486 50.000 0.00 0.00 0.00 3.16
2309 4397 4.580580 GGATTAGGGGCACTGTCTTAATTG 59.419 45.833 0.00 0.00 0.00 2.32
2310 4398 4.229582 TGGATTAGGGGCACTGTCTTAATT 59.770 41.667 0.00 0.00 0.00 1.40
2311 4399 3.785887 TGGATTAGGGGCACTGTCTTAAT 59.214 43.478 0.00 0.00 0.00 1.40
2312 4400 3.186283 TGGATTAGGGGCACTGTCTTAA 58.814 45.455 0.00 0.00 0.00 1.85
2313 4401 2.840511 TGGATTAGGGGCACTGTCTTA 58.159 47.619 0.00 0.00 0.00 2.10
2314 4402 1.668826 TGGATTAGGGGCACTGTCTT 58.331 50.000 0.00 0.00 0.00 3.01
2315 4403 1.668826 TTGGATTAGGGGCACTGTCT 58.331 50.000 0.00 0.00 0.00 3.41
2316 4404 2.689983 CAATTGGATTAGGGGCACTGTC 59.310 50.000 0.00 0.00 0.00 3.51
2317 4405 2.042979 ACAATTGGATTAGGGGCACTGT 59.957 45.455 10.83 0.00 0.00 3.55
2318 4406 2.689983 GACAATTGGATTAGGGGCACTG 59.310 50.000 10.83 0.00 0.00 3.66
2319 4407 2.358195 GGACAATTGGATTAGGGGCACT 60.358 50.000 10.83 0.00 0.00 4.40
2320 4408 2.031870 GGACAATTGGATTAGGGGCAC 58.968 52.381 10.83 0.00 0.00 5.01
2321 4409 1.929494 AGGACAATTGGATTAGGGGCA 59.071 47.619 10.83 0.00 0.00 5.36
2322 4410 2.587522 GAGGACAATTGGATTAGGGGC 58.412 52.381 10.83 0.00 0.00 5.80
2323 4411 2.438021 TCGAGGACAATTGGATTAGGGG 59.562 50.000 10.83 0.00 0.00 4.79
2324 4412 3.838244 TCGAGGACAATTGGATTAGGG 57.162 47.619 10.83 0.00 0.00 3.53
2325 4413 5.590259 ACATTTCGAGGACAATTGGATTAGG 59.410 40.000 10.83 0.00 0.00 2.69
2326 4414 6.683974 ACATTTCGAGGACAATTGGATTAG 57.316 37.500 10.83 0.00 0.00 1.73
2327 4415 8.455682 GTTTACATTTCGAGGACAATTGGATTA 58.544 33.333 10.83 0.00 0.00 1.75
2328 4416 7.040062 TGTTTACATTTCGAGGACAATTGGATT 60.040 33.333 10.83 0.00 0.00 3.01
2329 4417 6.432783 TGTTTACATTTCGAGGACAATTGGAT 59.567 34.615 10.83 0.00 0.00 3.41
2330 4418 5.765677 TGTTTACATTTCGAGGACAATTGGA 59.234 36.000 10.83 0.00 0.00 3.53
2331 4419 6.007936 TGTTTACATTTCGAGGACAATTGG 57.992 37.500 10.83 0.00 0.00 3.16
2332 4420 6.086241 CGTTGTTTACATTTCGAGGACAATTG 59.914 38.462 3.24 3.24 0.00 2.32
2333 4421 6.017770 TCGTTGTTTACATTTCGAGGACAATT 60.018 34.615 0.00 0.00 0.00 2.32
2334 4422 5.467399 TCGTTGTTTACATTTCGAGGACAAT 59.533 36.000 0.00 0.00 0.00 2.71
2335 4423 4.809958 TCGTTGTTTACATTTCGAGGACAA 59.190 37.500 0.00 0.00 0.00 3.18
2336 4424 4.370049 TCGTTGTTTACATTTCGAGGACA 58.630 39.130 0.00 0.00 0.00 4.02
2337 4425 4.977741 TCGTTGTTTACATTTCGAGGAC 57.022 40.909 0.00 0.00 0.00 3.85
2338 4426 6.367421 CAATTCGTTGTTTACATTTCGAGGA 58.633 36.000 0.00 0.00 0.00 3.71
2339 4427 5.567534 CCAATTCGTTGTTTACATTTCGAGG 59.432 40.000 0.00 0.00 0.00 4.63
2340 4428 6.367421 TCCAATTCGTTGTTTACATTTCGAG 58.633 36.000 0.00 0.00 0.00 4.04
2341 4429 6.301687 TCCAATTCGTTGTTTACATTTCGA 57.698 33.333 0.00 0.00 0.00 3.71
2342 4430 6.398517 GCTTCCAATTCGTTGTTTACATTTCG 60.399 38.462 0.00 0.00 0.00 3.46
2343 4431 6.640907 AGCTTCCAATTCGTTGTTTACATTTC 59.359 34.615 0.00 0.00 0.00 2.17
2344 4432 6.512297 AGCTTCCAATTCGTTGTTTACATTT 58.488 32.000 0.00 0.00 0.00 2.32
2345 4433 6.084326 AGCTTCCAATTCGTTGTTTACATT 57.916 33.333 0.00 0.00 0.00 2.71
2346 4434 5.705609 AGCTTCCAATTCGTTGTTTACAT 57.294 34.783 0.00 0.00 0.00 2.29
2347 4435 5.508200 AAGCTTCCAATTCGTTGTTTACA 57.492 34.783 0.00 0.00 0.00 2.41
2348 4436 4.611366 CGAAGCTTCCAATTCGTTGTTTAC 59.389 41.667 20.62 0.00 42.47 2.01
2349 4437 4.778904 CGAAGCTTCCAATTCGTTGTTTA 58.221 39.130 20.62 0.00 42.47 2.01
2350 4438 3.628017 CGAAGCTTCCAATTCGTTGTTT 58.372 40.909 20.62 0.00 42.47 2.83
2351 4439 3.268013 CGAAGCTTCCAATTCGTTGTT 57.732 42.857 20.62 0.00 42.47 2.83
2352 4440 2.969443 CGAAGCTTCCAATTCGTTGT 57.031 45.000 20.62 0.00 42.47 3.32
2357 4445 1.401539 GCCACACGAAGCTTCCAATTC 60.402 52.381 20.62 2.56 0.00 2.17
2358 4446 0.598065 GCCACACGAAGCTTCCAATT 59.402 50.000 20.62 0.00 0.00 2.32
2359 4447 1.244019 GGCCACACGAAGCTTCCAAT 61.244 55.000 20.62 3.81 0.00 3.16
2360 4448 1.896660 GGCCACACGAAGCTTCCAA 60.897 57.895 20.62 0.00 0.00 3.53
2361 4449 2.281484 GGCCACACGAAGCTTCCA 60.281 61.111 20.62 0.00 0.00 3.53
2362 4450 3.423154 CGGCCACACGAAGCTTCC 61.423 66.667 20.62 4.45 35.47 3.46
2363 4451 4.090057 GCGGCCACACGAAGCTTC 62.090 66.667 16.84 16.84 35.47 3.86
2371 4459 3.423154 CTTTCTCCGCGGCCACAC 61.423 66.667 23.51 0.00 0.00 3.82
2381 4469 4.699522 ACGGGCGGTGCTTTCTCC 62.700 66.667 0.00 0.00 0.00 3.71
2382 4470 0.952010 TAAACGGGCGGTGCTTTCTC 60.952 55.000 0.00 0.00 0.00 2.87
2383 4471 1.071814 TAAACGGGCGGTGCTTTCT 59.928 52.632 0.00 0.00 0.00 2.52
2384 4472 1.208358 GTAAACGGGCGGTGCTTTC 59.792 57.895 0.00 0.00 0.00 2.62
2385 4473 0.820482 AAGTAAACGGGCGGTGCTTT 60.820 50.000 0.00 0.00 0.00 3.51
2386 4474 1.228033 AAGTAAACGGGCGGTGCTT 60.228 52.632 0.00 1.69 0.00 3.91
2387 4475 1.670083 GAAGTAAACGGGCGGTGCT 60.670 57.895 0.00 0.00 0.00 4.40
2388 4476 2.683859 GGAAGTAAACGGGCGGTGC 61.684 63.158 0.00 0.00 0.00 5.01
2389 4477 2.036571 GGGAAGTAAACGGGCGGTG 61.037 63.158 0.00 0.00 0.00 4.94
2390 4478 1.844544 ATGGGAAGTAAACGGGCGGT 61.845 55.000 0.00 0.00 0.00 5.68
2391 4479 0.678684 AATGGGAAGTAAACGGGCGG 60.679 55.000 0.00 0.00 0.00 6.13
2392 4480 1.170442 AAATGGGAAGTAAACGGGCG 58.830 50.000 0.00 0.00 0.00 6.13
2393 4481 2.098607 GCTAAATGGGAAGTAAACGGGC 59.901 50.000 0.00 0.00 0.00 6.13
2394 4482 2.686405 GGCTAAATGGGAAGTAAACGGG 59.314 50.000 0.00 0.00 0.00 5.28
2395 4483 2.353579 CGGCTAAATGGGAAGTAAACGG 59.646 50.000 0.00 0.00 0.00 4.44
2396 4484 3.063045 GTCGGCTAAATGGGAAGTAAACG 59.937 47.826 0.00 0.00 0.00 3.60
2397 4485 4.004982 TGTCGGCTAAATGGGAAGTAAAC 58.995 43.478 0.00 0.00 0.00 2.01
2398 4486 4.258543 CTGTCGGCTAAATGGGAAGTAAA 58.741 43.478 0.00 0.00 0.00 2.01
2399 4487 3.370103 CCTGTCGGCTAAATGGGAAGTAA 60.370 47.826 0.00 0.00 0.00 2.24
2400 4488 2.169769 CCTGTCGGCTAAATGGGAAGTA 59.830 50.000 0.00 0.00 0.00 2.24
2401 4489 1.065418 CCTGTCGGCTAAATGGGAAGT 60.065 52.381 0.00 0.00 0.00 3.01
2402 4490 1.209504 TCCTGTCGGCTAAATGGGAAG 59.790 52.381 0.00 0.00 0.00 3.46
2403 4491 1.065709 GTCCTGTCGGCTAAATGGGAA 60.066 52.381 0.00 0.00 0.00 3.97
2404 4492 0.539986 GTCCTGTCGGCTAAATGGGA 59.460 55.000 0.00 0.00 0.00 4.37
2405 4493 0.541863 AGTCCTGTCGGCTAAATGGG 59.458 55.000 0.00 0.00 0.00 4.00
2406 4494 1.656652 CAGTCCTGTCGGCTAAATGG 58.343 55.000 0.00 0.00 0.00 3.16
2407 4495 1.656652 CCAGTCCTGTCGGCTAAATG 58.343 55.000 0.00 0.00 0.00 2.32
2408 4496 0.107654 GCCAGTCCTGTCGGCTAAAT 60.108 55.000 0.00 0.00 42.78 1.40
2409 4497 1.295423 GCCAGTCCTGTCGGCTAAA 59.705 57.895 0.00 0.00 42.78 1.85
2410 4498 2.656069 GGCCAGTCCTGTCGGCTAA 61.656 63.158 0.00 0.00 45.50 3.09
2411 4499 3.075005 GGCCAGTCCTGTCGGCTA 61.075 66.667 0.00 0.00 45.50 3.93
2413 4501 4.329545 TTGGCCAGTCCTGTCGGC 62.330 66.667 5.11 0.00 45.47 5.54
2414 4502 2.046892 CTTGGCCAGTCCTGTCGG 60.047 66.667 5.11 0.00 35.26 4.79
2415 4503 2.743928 GCTTGGCCAGTCCTGTCG 60.744 66.667 5.11 0.00 35.26 4.35
2416 4504 1.673665 CTGCTTGGCCAGTCCTGTC 60.674 63.158 5.11 0.00 35.26 3.51
2417 4505 2.149383 TCTGCTTGGCCAGTCCTGT 61.149 57.895 5.11 0.00 34.47 4.00
2418 4506 1.673665 GTCTGCTTGGCCAGTCCTG 60.674 63.158 5.11 2.77 34.47 3.86
2419 4507 2.753029 GTCTGCTTGGCCAGTCCT 59.247 61.111 5.11 0.00 34.47 3.85
2420 4508 2.743928 CGTCTGCTTGGCCAGTCC 60.744 66.667 5.11 0.00 34.47 3.85
2421 4509 2.743928 CCGTCTGCTTGGCCAGTC 60.744 66.667 5.11 1.93 34.47 3.51
2427 4515 3.088941 TATCCGGCCGTCTGCTTGG 62.089 63.158 26.12 5.84 40.92 3.61
2428 4516 1.883084 GTATCCGGCCGTCTGCTTG 60.883 63.158 26.12 6.69 40.92 4.01
2429 4517 1.895020 TTGTATCCGGCCGTCTGCTT 61.895 55.000 26.12 4.19 40.92 3.91
2430 4518 1.895020 TTTGTATCCGGCCGTCTGCT 61.895 55.000 26.12 2.57 40.92 4.24
2431 4519 1.429148 CTTTGTATCCGGCCGTCTGC 61.429 60.000 26.12 14.59 40.16 4.26
2432 4520 1.429148 GCTTTGTATCCGGCCGTCTG 61.429 60.000 26.12 9.25 0.00 3.51
2433 4521 1.153429 GCTTTGTATCCGGCCGTCT 60.153 57.895 26.12 13.37 0.00 4.18
2434 4522 0.743345 AAGCTTTGTATCCGGCCGTC 60.743 55.000 26.12 11.88 0.00 4.79
2435 4523 0.322187 AAAGCTTTGTATCCGGCCGT 60.322 50.000 26.12 9.29 0.00 5.68
2436 4524 1.597663 CTAAAGCTTTGTATCCGGCCG 59.402 52.381 21.04 21.04 0.00 6.13
2437 4525 1.947456 CCTAAAGCTTTGTATCCGGCC 59.053 52.381 22.02 0.00 0.00 6.13
2438 4526 2.612672 GACCTAAAGCTTTGTATCCGGC 59.387 50.000 22.02 0.92 0.00 6.13
2439 4527 3.118371 AGGACCTAAAGCTTTGTATCCGG 60.118 47.826 22.02 13.22 0.00 5.14
2440 4528 4.138487 AGGACCTAAAGCTTTGTATCCG 57.862 45.455 22.02 4.95 0.00 4.18
2441 4529 6.127140 TGAGTAGGACCTAAAGCTTTGTATCC 60.127 42.308 22.02 21.54 0.00 2.59
2442 4530 6.875076 TGAGTAGGACCTAAAGCTTTGTATC 58.125 40.000 22.02 14.41 0.00 2.24
2443 4531 6.869206 TGAGTAGGACCTAAAGCTTTGTAT 57.131 37.500 22.02 6.29 0.00 2.29
2444 4532 6.351881 CCATGAGTAGGACCTAAAGCTTTGTA 60.352 42.308 22.02 1.38 0.00 2.41
2445 4533 5.491982 CATGAGTAGGACCTAAAGCTTTGT 58.508 41.667 22.02 11.84 0.00 2.83
2446 4534 4.878397 CCATGAGTAGGACCTAAAGCTTTG 59.122 45.833 22.02 8.45 0.00 2.77
2447 4535 4.536489 ACCATGAGTAGGACCTAAAGCTTT 59.464 41.667 17.30 17.30 0.00 3.51
2448 4536 4.080863 CACCATGAGTAGGACCTAAAGCTT 60.081 45.833 1.75 0.00 0.00 3.74
2449 4537 3.452627 CACCATGAGTAGGACCTAAAGCT 59.547 47.826 1.75 0.00 0.00 3.74
2450 4538 3.798202 CACCATGAGTAGGACCTAAAGC 58.202 50.000 1.75 0.00 0.00 3.51
2451 4539 3.197766 TGCACCATGAGTAGGACCTAAAG 59.802 47.826 1.75 0.00 0.00 1.85
2452 4540 3.178046 TGCACCATGAGTAGGACCTAAA 58.822 45.455 1.75 0.00 0.00 1.85
2453 4541 2.827755 TGCACCATGAGTAGGACCTAA 58.172 47.619 1.75 0.00 0.00 2.69
2454 4542 2.543037 TGCACCATGAGTAGGACCTA 57.457 50.000 0.00 0.00 0.00 3.08
2455 4543 1.487976 CATGCACCATGAGTAGGACCT 59.512 52.381 0.00 0.00 43.81 3.85
2456 4544 1.210478 ACATGCACCATGAGTAGGACC 59.790 52.381 11.78 0.00 43.81 4.46
2457 4545 2.283298 CACATGCACCATGAGTAGGAC 58.717 52.381 11.78 0.00 43.81 3.85
2458 4546 1.407299 GCACATGCACCATGAGTAGGA 60.407 52.381 11.78 0.00 43.81 2.94
2459 4547 1.019673 GCACATGCACCATGAGTAGG 58.980 55.000 11.78 0.00 43.81 3.18
2460 4548 0.654160 CGCACATGCACCATGAGTAG 59.346 55.000 11.78 0.50 43.81 2.57
2461 4549 0.744057 CCGCACATGCACCATGAGTA 60.744 55.000 11.78 0.00 43.81 2.59
2462 4550 2.042259 CCGCACATGCACCATGAGT 61.042 57.895 11.78 0.00 43.81 3.41
2463 4551 2.795973 CCGCACATGCACCATGAG 59.204 61.111 11.78 5.38 43.81 2.90
2464 4552 3.442167 GCCGCACATGCACCATGA 61.442 61.111 11.78 0.00 43.81 3.07
2465 4553 4.840288 CGCCGCACATGCACCATG 62.840 66.667 4.49 3.80 46.18 3.66
2479 4567 3.177249 GTAAGCACGGACGTCGCC 61.177 66.667 9.92 0.00 43.89 5.54
2480 4568 1.804326 ATGTAAGCACGGACGTCGC 60.804 57.895 9.92 7.68 43.89 5.19
2481 4569 1.988409 CATGTAAGCACGGACGTCG 59.012 57.895 9.92 7.64 45.88 5.12
2482 4570 0.736325 AGCATGTAAGCACGGACGTC 60.736 55.000 7.13 7.13 36.85 4.34
2483 4571 0.736325 GAGCATGTAAGCACGGACGT 60.736 55.000 0.00 0.00 36.85 4.34
2484 4572 0.458543 AGAGCATGTAAGCACGGACG 60.459 55.000 0.00 0.00 36.85 4.79
2485 4573 2.194271 GTAGAGCATGTAAGCACGGAC 58.806 52.381 0.00 0.00 36.85 4.79
2486 4574 1.136305 GGTAGAGCATGTAAGCACGGA 59.864 52.381 0.00 0.00 36.85 4.69
2487 4575 1.137086 AGGTAGAGCATGTAAGCACGG 59.863 52.381 0.00 0.00 36.85 4.94
2488 4576 2.099921 AGAGGTAGAGCATGTAAGCACG 59.900 50.000 0.00 0.00 36.85 5.34
2489 4577 3.131223 TGAGAGGTAGAGCATGTAAGCAC 59.869 47.826 0.00 0.00 36.85 4.40
2490 4578 3.365472 TGAGAGGTAGAGCATGTAAGCA 58.635 45.455 0.00 0.00 36.85 3.91
2491 4579 4.599047 ATGAGAGGTAGAGCATGTAAGC 57.401 45.455 0.00 0.00 0.00 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.