>input_sequence_77827
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-----------------------------------------------ATGGGAGCTGGGATGAAGCGCTCGAGGGACGAG
GAGGTAT---TGTCGCTGGCGCTGGCACTGACCACGGACTCATCGACGTCGTCTACGACTTCAGCGGACTCAG---CCGG
GTCACCGGCCAAGAAAGCACGGCGACGCACGAGGGGCGCCGTGGTGGCGACGTCGGGTGAGGGGGAGTTCGTGTGCAAGA
CGTGTGGCCGTGCCTTTGCCTCCTTCCAGGCGCTAGGCGGGCACCGGACGAGCCACCTTCGGGGCCGCCACGAGCTGGAG
CTCGGTGTCGGCGTCGCCAAGGCAATCAGAGAACGGAGAAGACGGGAGAACAAGCAGCACGAGTGCAACATCTGCGGCAT
GGGGTTCGAGACGGGCCAGGCGCTCGGGGGACACATGAGGCGTCACCGCGAGGAGATGGCACTGCGCGGCG---GCCA--
-CGA------------------TGGCGTA---GCGCTACTGCCGGATCAGGTGGTGACGGGGCACCAGGCCACTACCAAG
CAGCCGCCCGTCTTGCTCAAGCTGTTCGTCTAG-----------------------------------------------
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>chr5D_1_TraesCS5D01G490600
TGAGCTACGCGCTAAGTGAGAACACGTACGCGCCAGTAAACTTTTGTTTTGGTTCTAGAACATCGCTCGGCCGGTCTATA
CGCTTTACCTAATCGTGATCTCAAGGCTCCAAGCTGAGAAATGCTGACCGATTTCCCTAGGGATTTGATTTTAGTTTACT
TGTTCTTCAGTGCTCTGGAAGCCGGCCGGGCAGCCCCCTCGCAGTACGACT---------------------TACCACTT
CAACTAGCTGCACA-----------AATAGATTGGATCAATGATCACGCAGTGACGTCACCATATATGTGCATGCCGATT
GTATGTGCTAATCTACTTGTGTCCCAAGTTTTGTTGCTCCTTCTTAGATAGTGGAACGCTGGTTCGGACAAGTTTCGTCG
ATGT-CCTGGGCAACATGTGTATTATAAAGA------CAAG-TACGAAGACGACGTCTCTTTCCGACTATATATATATAT
CTCC--------CGAGTCACGACCGTGTTGACACGGTTGTGCTTGCCT--------CTCATAAGGAGATTACTTAG---T
TA-------AGTTGTCGACATGTCCATATATTGGCATCCAACC-TGGTGAAAAAGAGCAAGAGTACATCTTCACCCATGC
ATATCCGA---ATC---TAAAAGTTTAATGTTTTGGACTGATTAGCA-TCTTTA---GTGGCAGGTGCATACTTG-----
---------------------------------TACTA-----GTAACCTCTTTAGGGGCACACGGTTGAGACCTTATTA
GTTTACTTAAC---TGAGATAGGATACAAGCTGCGCACT-GGTATATAAATTACGCGGTGCGGTACCATCATCAGTAAGT
AGTA--C---GTACG--TAGTTTACTTAAG--GTAAAATACATTGTTG-----TA-TTTTAATTGGTAGCTTTCCAGTTG
CAACAAGCTAG--------AT-----------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
TGCGTTTAGTTTGCCAGCCCATACCAACTCCACACCCACGTACC--TATATATGACATGAGC------CACCCATA----
--TGCCATATCAACT-----AGTTCATTCTCCATTCCCCCACAC--A-GACAACGAAGCTAGC---TGGAAGTC--TACG
AAGGACAAGAAG---TCGGAGGATCATCAAAC------------TCCATGGGAGCTGGGATGAAGCGCTCGAGGGACGAG
GAGGTAT---TGTCGCTGGCGCTGGCACTGACCACGGACTCATCGACGTCGTCTACGACTTCAGCGGACTCAG---CCGG
GTCACCGGCCAAGAAAGCACGGCGACGCACGAGGGGCGCCGTGGTGGCGACGTCGGGTGAGGGGGAGTTCGTGTGCAAGA
CGTGTGGCCGTGCCTTTGCCTCCTTCCAGGCGCTAGGCGGGCACCGGACGAGCCACCTTCGGGGCCGCCACGAGCTGGAG
CTCGGTGTCGGCGTCGCCAAGGCAATCAGAGAACGGAGAAGACGGGAGAACAAGCAGCACGAGTGCAACATCTGCGGCAT
GGGGTTCGAGACGGGCCAGGCGCTCGGGGGACACATGAGGCGTCACCGCGAGGAGATGGCACTGCGCGGCG---GCCA--
-CGA------------------TGGCGTA---GCGCTACTGCCGGATCAGGTGGTGACGGGGCACCAGGCCACTACCAAG
CAGCCGCCCGTCTTGCTCAAGCTGTTCGTCTAG---------------------------------------GTAGATAC
GTCCATTTCTCCGG------------------------------------------------------------------
-------------------CAA----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATAATTCCGAAAAGA
GG---------------GAGTATATACTACGCACAAGTAGAGATTGTTAGCGTTTCTGAAC-ATTGATGAACTTTGCTTA
GCATCA--------------------------------------------------------------------------
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-------TTCTTCATTCAGCAACT--------------------------------------------------------
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---------------------------------------------TGATCTAAAAATGTTGTTCTCGATCAGACATCAGA
TTGCGGTTCGACGAATATGATTGATGTACGTAGAGCATCAATGCTCCAGGCTGGCAGTGTTCCATTTGTTGCGCCGCATG
GGTGACCTATATATGTTTCCATAGCTGATTTTTTTTCCAGAAAATGAGGATGACCCCCGGGCCTCTCTACATCTGGAAGA
TGCATGCAGCCACTTTATTAATTATTCACAAAAACCTAACAAAGTAATACATCAATATATCTAAAGCCACCGTCATGCTT
CCATGGTTGATACGGACTAGTTAGCCCGATCGAAGGCCACTTGTCCGAACACGTGTGTTGTTCG----------------
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-----------------------------------------------------------TGCGTACACTTACATAGTACG
TAGTCAACCTCCTCGCGAGTCTGGACAGTGGACACTAAGTTGGCACGGTTAGGCTTGTCCAAACTAGGAGCGCAAAGATG
AATCTGTCGGCATGTCCATGTCCTGGGCATCC--AACCTGCTGGTCAAAGACCAAGAGACTTGACCCGTGAATATCCAAG
TCTAAGGGTTTTGGATTGATTG----GATAA-TACCTTTACTGGTCGACAAGTCTGCAGACTAGCACTCACGAGGTAAGG
TAAATGCCACTCGATCGGTGGCACACGGTGCAGCTCTCAGACAAAGGCTGTGCCTGGTTGCTTAATACTTTTCGGCCAAT
TAAGACAGTGCCCCTAATCCAATTGTCCTCGAAATGTAAACAACGAATTGGAAGCTTCGTGTGGCCGCGGAGAAAGCACC
GCCCGTTTACTTCCCATTTAGCCGACAGGACTGGCCAAGCAGACGGCCGGATACAAAGCTTTAGGTCCTACTCATGGTGC
ATGTGCGGCGACGTCCGTGCTTACATGCTCTACCTCTCAT
>chr5B_1
TGAGCTACGCGCTAAGTGAGAACACGTACGCGCCAATAAACTTTCGTTTAGGTTCTAGAACATCGCTCGGCCAGTCTGTA
CGCTTTACCTAAACGTGACCTCAAGGCTCCAAGCTGGGAAATGCTGACCGATCTGCCTCAGGATTTGATTTTGGTTTACT
TGTTCTTCAGTGCTCTGGAAGCCGGCGGCGCAGCCTCCTCGCAGTACGACT---------------------TACCACTT
CAACTAGCTGCACC-----------AATAGATTAGATCAATGAGCACGCGGTGACGTCACCATATATGTGCATGCCGATT
CTATGTGCTAATCTACTTGTGTCCCAAGTTTTGTTGCTCCTTCTTAGATAGTGGAACGCTGGTTCGGACAAGTTTCGTCG
ATGT-TCTGGGCACCATGTGTATTATAAAGA------CAAG-TACGAAGACGACGTCTCTTTCCGACTATATCTCTC---
------GAGACTCGAGTCATGACCGTGTTGACACGGTTGTGCTTGCCT--------CTCATAAGGAGATTACTTAG---T
TA-------AGTTGTCGACATGTCCATATATTGGCATCCAACC-TGGTGAAAGAGAGC----------------------
-------A---ATC---TAACA-------GTTTTGGACTGATTAGTG-TCTTTA---CTTGCAAGTGCGCAAACTAAACA
TTGTACTCACGCGGCAAGGTG----------TATACTATACTAGTAACCTCTTTAGGGACACACGGTTGAGACCTTATTA
GTTTACTGAGTACTTGAGATAGGATCCAAGCTGCGCACTCGGTATATAAATTATGCGGTGCGGTACCATCATCAGTAAGT
AGTA--C---GTACG--TAGTTTACCTAAG--GTAGAATACATTGTTG-----TATTTTAATT-----------------
-AGCAAGCTAG--------ATGCTTTTAGGCGAATCAACTTGTGATTGGGTGGTTAGAGGGACTGTGATATCTCCAGTCC
ATCAGGGTTCAAATCCTGGTGCTCGCATTTATTTCAGAATTTCCGGCGATGCGCATTAAGTGGGAGGAGACGTTTCCGTC
GACGACGAGGTGCCTACGGTGATTTCGTAAATTTCAAGATGATATGCCGGCTAAGTCTTTCGGAGGTGCTTATAGAGATA
GGGTGTGTGTGTGTACGTTCATAGGGGTGAGTGTATGCGCGTGTACATGAGCGTTTGTGTTTTCAGAAAAAAAAGCTAGA
TGCGTTTAGTTTGCCAGCCCATACCAACTCCACACCCACGTACC--TATATATGACATGAGC------CACCCATA----
--TGCCATATCAACTAGTTCAGTTCATTCTCCATTCCCCCACAG--A-GACAACCAAGCTAGC---TGGAAGTCTATACG
AAGGACAAGAAG---TCGGAGAATCATCAAAC------------TCCATGGGAGCTGGGATGAAGCGCTCGAGGGACGAG
GAGGTAT---TGTCACTGAAGCTGGCACCGACCACGGACTCATCAACGTCGTCCACGACGTCAGCGGACTCAG---CCGG
GTCTCCGGCGAAGAAAGCACGGCGACGCATGAGGGGCGCCGTGGTGGCGACATCGGGTCAAGGGGAGTTCGTGTGCAAGA
CGTGTGGCCGTGCCTTCGCGTCGTTCCAGGCGCTCGGCGGCCACCGGACAAGCCACCTTCGAGGCCGGCACGAGCTGGAG
CTCGGCGTCGGCGTCACCAGGGCTATCAGAGAACGGAGAAGACGGGAGAACAAGCTGCACGAGTGCAGCATCTGCGGCAT
GGGGTTTGAGACCGGCCAGGCGCTCGGGGGACACATGAGGCGTCACCGCGAGGAGATGGCACTTCGCGGCC---GCGG--
-CGACGACGAGCAGTGGGTGTGTCGCGGTGTCGAGCTACAGCCGGGTCAGGTGGTGACGGGGCACCAGACCACTTCCAAC
CAGCCGCCCGTCTTGCTTAAGTTGTTCGTCTAG---------------------------------------GTAGCTAG
GT------------------------------------------------------------------------------
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>chr5B_79
------------------------------------------------------------------------------TA
CGCTTTACCTGAACGTGATCTCAAGGCCCTAAGCTGAGACATGCTGATCGATCTGCCTCAGGATTTGATTTTAGTTTATT
TACTTGTCAGCGCTCTGGAAGCCGGCCGCGCAGCCCCTG-GCAGCACGACTTGCCGCGTTAACTACTACTACTACCACTA
CAACTAGCTGCACCTTGCAAGCCCGAACAGATTAGATCCATGAGCGCGCGGTGATGTCACCATGC---------------
----------ATCTACTTGTGTCCCAAATGTCGTTGCTCCTTCTTAGATACTGGAACGCTGGTTCGGACAAGTTTCC-CT
ATGT-CCTGGCAACCATGTGTATTATAAAGA------CAAG-TACGAAGACGATGTCTCTTTCCGACTATATATCTCTCG
AGTCTTGAGTCT-------TGACCGTGTTGACACGGTTGTGCTTGCCT--------CTCACAAGGAGATTACGTAGTTAT
TA-------AGTTATCGACATGTCCATGTATTGGCATCCAACC-TGATGAAAAAGACCAAGAGTACATCTTCACCCATGC
ATATATTA---ATCTAATAACA-------GTTTTGGACTGATTAGTA-TCTTTA---CTAGCAAGTGCGCAAAGTAAACA
TTGTACTCACGCGGCAAGGTG----------TATGCTA-----GTAACCTCTTTAGGGACACACGGTTGAGACCTTATTA
GTTTACTTAGTACTTGAGATAGGATCCAAGCTGCGCACTCGGTATATAAATTACGCGGTGCGGTACCATCATCAGTAAGT
AGTA--CTACGTACGTATAGATTACTTAAG--GTAGAATACATTGTTG-----TATTTTTAATTGGTAGCTTTCCAGTTG
CAGCAAGCTAG--------AT-----------------------------------------------------------
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-GCGTTTAGTTTGCCAGCCCATACCAACTCCACACCCACGTACC--TATATATGACATGAGC------CACCCATA----
--TGCCATATCAACTAGTTCA-----TTCTCCATTCTCTCACAG--A-GACAACCAAGCTAGC---TGGAAGTC--TAGA
AAGGACAGGAAA---TCAGAGGATCATCAAAC------------TACATGGGAGCGGGGATGAAGCGAGTGAGGAACGAA
GAGGTAT---TGTCGCTGGCGCTGGCACTGACCACGGACTCATCGACGTCGTCCATGACTTCAGCTGACTCAG---CCGT
GTCACCGGCCAAGAAAGCACGGCGACCCACGAGGGGCGCCGTGGTGGCGACGTCGGGTGAGGGGGAGTTCGTGTGCAAGA
CGTGCGGCCGTGCCTTCGCCTCGTTCCAGGCGCTCGGCGGGCACCGGACGAGCCACCTTCGGGGCCGCCACGAGCTGGAG
CTCGGCGCCGGCATCTCCAGGGCCATCAGAGAACGGAGAAGACGGGAGAACAAGCAGCACGAGTGCAGCATGTGCGGCAT
GGGGTTCGAGACGGGACAGGCGCTCGGGGGACACATGAGGCGTCACCGTGAGGAGATGGCACTGCGCGGCC---GCGG--
-CGACGACGACCAGTGGGTGTGGCGCGGCGTCGCGCTACTGCAGGGTCAGGTGGTGACGGGGCACTAGGCCACTGCCAAT
CAGCCGCCCGTCTTGCTCAAGCTGTTCGTCTAGCC-----------------------------------AGGTAGCTAG
----CTGGAAAGAAGGAAGACGACAAGGTTTGGTCTCCTTTTGTTTCTTGATGCGTGGAACACTTGTAAATGTTTTTGAT
TAGAATGAGATATAATGGTTCACTGTTCGATCTTGTAAACACGAAATTCATATGT-------------------------
--------------------------------------------------------------------------------
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---------------------ATGTAGTACGCACTAGTGTAGGGG-----------TGAAT-ATTGACGAAGTTTGCTAA
GGATGGTTCAGTTTTTGAACCTTACCCGCCTCG-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------GAGGAA
AATTCGTTTCTACATTTGGCAATT--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CGATCTCAAAAT---------GATCAGTCATTAGA
TTGCGGTTCGACGAATATGATTGATGTACGCAGCATACCGATGCTCCAGGCCGGCAGTGCTCCATTTGCTGGACCACAAC
ACGGGCC-ATCTATGTTTCCATAGCTGATACCGACCG-------------------------------------------
--------------------------------------------------------------------------------
-------------------GTTAGCCCGATCGAAGGCCACTTGTTCAAACACGTGTGATGTGCCTGTTATAAGATGCATG
GAGGTGGAGTATACCCTAGCGTAACCGTTATTAAACGATGAGATTGCAGCGGTACTTGCTTACGCCTTGACTGGGACGAG
ATGCTGACAGACCTTCTACTTCAGTTTCGTGCAAACGTCGCTTGCGCCCAAAGCCGCGATCTAGCTATCCCGGCCGCCAC
TATACTTGAATCGAACGCTGGACATGAGAATGATGAGATGAGCCCATCTGCCCATGCATGCACACGTGTGATGTCATGGC
ACCAACACCGCACGTCACCATGGCCATGTATGAATGCACATGTTCGAGGAATCTACTCGTGCACCAGGTGAGCAGTGAGA
ACGCGTGTACTACTAGTTAGTT----CTTGGATATATGCTGGACTGCAGGCTTGGACAAATTTCATGCATGATCGGATGT
GTACAAGAAGCATGTCTCTGTCCAACTAGTAT------------------------------------------------
--------------------------------------------------------------------------------
-----------CTCCCGAGTCTTGACAGTGGACA--------------------------------------CAAAGATG
AATCCGTCGGCATGTCCATGTCCTGGGCATCC--AACATGCTGGTCGAAGACCAAGAGACTTGACCCGTGCATACTCC--
--------------------------------------------------------------------------------
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----------------------------------------
>chr5B_234
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-------------------------AATAGATTAGATCCATGAGCGCGCGCTGGAGTCACCATGTATGTATATACCAATT
CTATGTGCTAATCTACTTGTGCCCCAAGTGTTGTTGTTCCTTCTTAGATACTGGAACGCTGGTTCGGACAAGTTTCGTCT
ATGT-CCTGGGCACCATGTGTATTGTATTACAAAGACAGGTACAGGAGGACGACGTTTCTTTCCAACTATATCTCTG---
------GAATA--T-----CGGCCGCGTTGACACGGTTGTGCTTGCCT--------CTCATACGCCGAATACTTAG---T
TA-------AGTCGTCGACATGTTCATATATTGGCATCCAACC-TGGTGAAAAAGACCAAGAGTACATCTTCACCCACGC
ATATCTGA---ATC---TAACAGT----------------ATTAGTA-TCTTTATTACTGGCAAGTGCGCAAACTAAACA
TTGTACTCACGCGGCAAGGTACATACTTAATTACACTA-----GTAACCTCTTTAGGGGGACACGGTTGAGACCTTATTA
GT----T---TACTTGAGATAGGATCCAAGCTGCGCACTCGGTATATAAATTACGCAGTGAGGTACCATCATCAGTAAGT
AGTA--C---GTATCGTA--------------------------------------------------------------
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>chr5A_285
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----------------------------------------------------------------------------GATT
CTATGTGCTAGTTTACGTGTGTCCCAAGTGTTGCTGCTCCTTCTTAGATACTGGAACGCTGGTTCGGACAAATTTCGTCT
ATGTCTCGGGGCACGATGTGAACTATAAAGA------AAGTACAGGAAGACGATGTCTCTTTG-GACTATATCTCTC---
------GAGTCTCT-----CGGCCGTGTTGACACGGTTGTGCTTGCCTGATTGCCTCTCATAACACGGTTACTTAG---T
TA-------AGTTGTCGACATGTCCATATATTGGCATCCAACTTTGGTGAAAAAGACCAAGAGAACATCCTTCCCCGTAC
ATATCTGA---ATC---TAAAA-------GTTTTGAACTGATTAGTA-TCTTTATTACTGGCAAGTGCGCAAACTAAACA
TTGTACTCACGCGGCAAGGTACATACTTATGTA-ACTA-----GTAACCTTTTTAGGGGGACACGGTTGAGACCTTATTT
GT----T---TAGTTGAGATAGGATCCAAGCTGCACACTCGGTATATAAATTACGCGGTGCGGTACCATCATCAGCGAGT
AGTA--C---GTAC-TATAGTTTACTTTAGGAGTAGAATACATTGTTATACACTA-TTTTATTTGGTAGCTTTCCAGTTG
CAGCAAGCTAG--------AT-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-GCGTTTAGTTTGCCAGCCCCTAGCAACTCCACACCCACGTACC--TATATA--ACGTGAGC------CACCCATA----
--TGCCATATCAAATCC--------------------------------ACAACCAAGCTAGC-----GAAGTCTATACA
AAGGACAAGAAA---TCGGAGG---ATCAAAC------------ACCATGGGAGCGGGGATGAAGCGCACGAGGAACAAG
GAGGTAT---TGTCTCTGGCGCTGGCACTGACCACGGACTCATCAACGTCGTCCACAACGTCAGCGGACTCGG---CCGG
GTCACCGGCAAAGAAAGCACGGCGACGCGAGAGGGGCGCCATGGTGGCGACTTCGGGTGAGGGGGAGTTCGTGTGCAATA
CGTGCGGCCGTGCCTTCGCGTCCTTCCAGGCGCTCGGCGGGCACCGGACGAGCCACCTTCGGGGCCGCCACGAGCTGGAG
CTCGGCGTCGGCATCGCCAGGGCCATCAGAGAACGGAGAAGACGGGAGAACAAGCAGCACGAGTGCAGTATCTGCGGCAT
GGGGTTCGAGACGGGCCAGGCGCTCGGGGGACACATGAGGCGTCACCGCGAGGAGATGGCTCTGCGCGGCGGCGGCGG--
-CGACGACGACCAGTGGGTGTGGCGCAGCGTCGCGCTACTGCCGGGTCAGGTGGTGACGGGGCAGCAGGCCACTGCCAAC
CAGCCGCCTGTCTTGCTCAAGCTGTTTGTCTAG---------------------------------------GTAGCTTG
----CTGGAAAGAAGGAAGACGATACGTTTTCG------TTTCTTCATTGATGCGTGGTGCACTTGTAAATGTGTTTGAT
TCGAATGAGATATACAGGTTCGCTGTTCGATCTTGTAAACACGAAATTCATACTATACTGGTCCCTCCGT----------
---------------TTCTAAATAAATATAAGACTTTGTAGAGATTTTAATACATTGCTATATATGTATGTGGATGTATT
TTAGAGTGTAGATTCACACATTTCGCTTCGTATGTAATCCACATTTGAAATCCCTAAAAAGTCTTATATTTAGGAACTGA
GA---------------GAGTATATACTACGCATAGGTAGAGATTGTTAGCGTTTTTGAAC-ATTGGTGAATTTTGCTAT
GGATCTTTCAGTTTTTGAACC-----AGCCTTTGGACGGGATTCATCAATTTCGTTGGCGACTCAGAGGAAAATCTGTTT
TGCTATTCGTCAGGTACCTGAAATTCTTCCTCGTGCCAGTCACCTCTTTCCTTCCTTCCTTCGTTCCTTCACGCCGGACC
TCGCCGGAGAAGAGAACCCCACTATCTATCTTAGGGCGGAGCCATGACCCCATTATCTATCTTAGGGGGTGGGGGTGTAG
GGGATCGTCGGAATTGTTTTTGGGTGAGGTGGAGCTTAGAGGGATGGCCGGGGCGGCGGCCAACATGGCGGTGGGG-GAG
GTAGAGGGGAGGGCGGGGCAGGGAGGAAGAATGGCCGGAGGTAGAAGATGAACAGTGATGTGATATGTTCTCGACCGTTG
GATGAAGATTTAAGGGCCCTGGATCAAGGTGACTGATGCAGTTTTTTTCAGTTAATTGATGCGTAGACGGTCCCGAGGAA
AATCCGTTTCTTCATTCAACAATT--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------GGATCTCAAAATGTTCTTATCGATCAGTCATCAGA
TTGCGGTTCGACGAATATGATCGGTGTATGTGGCGTATCGATGCTCCAGGCCGGCAGTGTTCCATTTGCTGCGCCACA--
-CGGGTC-ACCTATATTTCCATAGCTGAT---------------------------------------------------
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>chr5A_299
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----------ATCTACTTGTGTCCCAAATGTTGTTGCTCCTTCTTAGATACTGGAACGCTGGTTCGGACAAGTTTCC-CT
ATGT-CCTGGGAACCATGTGTATTATAAAGA------GAAG-CACGAAGACGATGTCTCTTTCCGACTATATCTCTC---
------GAGTCT-------TGACCGTGTTGACACGGTTGTGCTTGCCT--------CTCACAAGGAGATTACTTAG---T
TATTAAGTCAGTTATCGACATGTCCATATATTGGCATCCAACC-TGATGAAAAAGACCAACAGTACATCTTCACCCATGC
ATAGATGA---ATC---TAACA-------GTTTTGGACTGATTAGTACTCTTTC---CTGGCAAGTGCGCAAAGTAAACA
TTGTACTCACGCGGCAAGGTGTATAC-----TATACTA-----GTAACCTCTTTAGGGACACACGGTTGAGACCTTGTTA
GTTTACT---TAATTGAGATAGGATCCAAGCTGCGCACT-GGTACATAAATTACGCGGTGCCGTACCATCATCAGTAAGT
AGTATACTACGTACGTATAGATTACTTAAG--GTAGAATACATTGTTG-----TA-TTTTAATTGGTAGCTTTCCAGTTG
CAGCAAGCTAG--------AT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCGTTTAGTTTGCCAGCCCCAAGCAACTCCACACCCACCTACCTACATATA--ACGTGAGC------CACCCATA----
--TGCCATATCAACACCTTCA-----TTCTCCATTCTCTCACTCACACGACAACCAAGCAAGC---TCGAAGTC--TGCG
AAGGACAGGAAA---TCCGAGG---ATCAAAC------------CCCATGGGAGCGGGGATGAAGCGAGCAAGGAACGAA
GAGGTAT---TGTCGCTGGCGCTGGCACTGAGCACGGACTCATCGACGTCGTCCACGACTTCAGCTGACTCAG---CCGG
GTCACCGGCCAAGAAAGCACGGAGACGCACGAGGGGCGCCGTGCTGGCGACGTCGGGTGAGGGGGAGTTCGTGTGCAAGA
CGTGCGGCCGAGCCTTCGCCTCGTTCCAGGCGCTCGGCGGGCACCGCACGAGCCACCTTCGTGGCCGCCACGAGCTGGAC
CTCGGCGTCGGCATCGCCAGGGCCATCAGCGAGCGGAGAAGACGGGAGAACAAGCAGCACGAGTGCAGCATCTGCGGCAT
GGGGTTCGAGATGGGCCAAGCGCTCGGGGGTCACATGAGGCGTCACCGCGAGGAGATGGCTCTGCGCGGCC---GCGGTG
ACGACGACGACCAGTTGGTGTGGCGCGGCGTCGCGCTACAGCCGGGTCAGGTGGTGACGGGGCACCAGGCCACTGCCAAC
CAGCCGCCCGTCTTGCTCAAGCTGTTCGTCTAG---------------------------------------GTAGCTAG
----CTGGAAAGAAGAAAGACGATACGCTTTTG------TTTCTTTAATGATGCGTGGAGCACTTATAAATGTGTTTGAT
TGGAATGGGATATATAGGTTCACTGTTCGATTTTG---------------------------------------------
--------------------------------ACCTTTTAGAGATTTTAATATGG-GCTACATATGGATGTA--------
------TGTAGATTCACTCATTCCGGTTCGTATATAGTCCGCATTTGTAATCTCTAAAGAGCCTTATATTTAAAAACGGA
GA---------------GAGTATATACTATGCATAAGTAGAGATTGTTAGCGTTTCGGAAGGATTGATGAA-TTTTCTAA
GGATCTTTCATTATTTGAACCGTATAAGCCTTTGGACGGGATTCATCAATTTCATTGGTGACTTGGAGGAAAATGTGTTT
TGCTATTTGTCAGGTACCTGAAATTTTTCCTCACGTCAGTGACCTCTTTTCTTCCTTCCTTCATTCCTTCACGCCGGACC
TCGTTGGAGAAGAGAACCCCACTATCTATCTTAGGACGGAGCCATGGCCCCACTGTCTATCTTCGAGGGTGGTC-TGCAG
GGGATCACTACAGTTGTTTTGCGGTGAGGTAGAATTTAGAGGGATGGCCGGGACGGCGACCAACATGACTGTGGGGAGAG
GTAGATTGAACGCTGGGGCCGGGA--------------------------------------------------------
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----------------------------------------------------------ATCTAGCTAGCCCGGCCGCCAC
AATACTTAAATTGAACGCTGAACC---------TGAGATGAGCCCATGCAGTACTA-----------GTGATGTCATGGC
AGCAACACTGCATGTCACCTGGAGTACATATATGTTA-------CGAGTAATCTACTTGTGCCCCAGGTGAGCAGTGAGA
ACGCGTGTACTACTAGTT----------------------------CAGGATCGGACAATTTTGGTGCGTGATCGGATAT
GTACAAAAAGGATGTCTCTGTCCAAC---TAT------------------------------------------------
--------------------------------------------------------------------------------
-----------CTCTCGAGTATGGACAGTGGACACTA-GTTGGCACGGCTAAACTTGTCCAAACTGGGAGCGCAAAGATG
AATCTGTCGGCATGTCCATGTCCTGGGGCATCCAAACCTGTTGGTCGAAGACGAAGAGACTTGGCCCGTGCATATCTAAG
TCT--CGGTTTTGGACTGATTG----GATAAGTACCTTTACTGGTCGACAAGGGTGCAGAGTTGCACTCACACGGTAGGG
--------------------------------------------------------------------------------
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----------------------------------------
>chr5D_313
--------------------------------------------------------------------------------
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------------------------CAAGTTTTGTGGCTCCTTCTTAGATACTGGAACGCTGGTTCGGACAAGTTTCC-CT
ATGT-CCTGGGAACCATATGTATTATAAAGA------CAAG-TACGAAGACGATGTCTTTTTCCGACCATATCTCTC---
------GAGTCT-------TGACCGTGTTGACACGGTTGTGCTTGCCT--------CTCACAAGGAGATTACTTAG---T
TATTAA----GTTATCGACATGTCCATATATTGGCATCCAACC-TGATGAAAAAGACCAAGAGTACATCATCACCCATGC
ATATAAATCAGATC---TAACA-------GTTTTGGACTGATTAGTG-TCTTTA---CTGGCAAGTGCGCAAACTAAACA
TTGTACTGACGCGGCAAGGTGTATAC-----TATACTA-----GTAACCTCTTTAGGGACACACGGTTGAGACCTTATT-
-----------AGTTGAGATAGGATCCAAGCTGCGCACTCGGTATATAAATTACGCGGTGCGGTACCATCATCAGTAAAT
AGTA--C---GTACGTATAGTTTACTTAAG--GTAGAATACATTGTTG-----TA-TTTTAATTG-TAGCTTTCCAGTTG
CAGCAAGCTAG--------AT-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCGTTTAGCTTGCCAGCCCCTAGCAACTCCATACCCACCTACT--TATATATAACGTGAGCCACGGGCACCCATA----
--TGCCATATCAACCCGTTCA-----TTCTCCATTCTCTCAC----A-GACAACCAAGCTAGC---TGGAAATC--TACG
AAGGACAAGAAGAAGTCGGAGG---ATCAAAC------------TCCATGGGAGCGGGGATGAAGCGCGCGAGGGACAAG
GAGGTAT---TGTCGCTCGCGCTGGCGCTGACCACGGACTCACCGACGCCGTCCACGACGTCAGCGGACTCAG---CCGG
GTCACCGGCCAAGAAATCACGGCGACGCGCGAGGGGCGCCGTGGTGGCCACATCGGGTGAGGGGGAGTTCGTGTGCAAGA
CGTGCGGCCGTGCCTTCGTGTCGTTCCGGGCGCTAGGCGGGCACCGGACGAGCCACCTTCGGGGCCGTCATGAGCTGGAG
CTCGGTGTCGGCATCGCCAGGGCCATCAGAGAACGGAGAAGACGGGAGAACAAGCAGCACGAGTGCAGCATCTGCGGCAT
GGGGTTCGAGACGGGCCAGGCGCTCGGGGGACACATGAGGCGTCACCGCGAGGAGATGGCACTGCGCGGCC---GCAG--
-CGACGACGACCAGTGGGTGTGGCGCGGCGTCGCGCTACTGCCGGGTCAGGTGGTGACGGGGCACCAGGCCAGTGCCAAC
CAGCCACCCGTCTTGCTTAAGCTGTTCGTCTAG---------------------------------------GTAGCTAG
CTAGCTGGAAAGAAGGAAGACGATCAAAAGGTCACTTTGGAACCCGGGTGCATTGGAGCCCTATTTTTTGAACTGTGTTA
AAAGGCTATTTTAAAGTTTCAA----------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------AAAATTCTGAAAACA
AATCAACATGTTTATATGAGTGTATATAACACATGTGTAAATTTTGATGCTGAAATAAGTAACCATGTGAATTACACAAA
AATGATAAAATCATGATTTTGGA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------AAGATGAACAGTGCATGCATTATTCACTATTTGGAA
ATCATCATCTTGTCATTTTTGTATAGGTCGCATATTTACTTATTTCATCACCAAACTTTACACATGTGTTATATACATTA
GTGTTACAATTTACATGAACACCGACACCGCCATCCATCCACCACCCATCCTACTCTATCGACTAACTACTCGGTCTAGC
CCATCCTTCCACATTTCGAAAGAAGTCGTTCATCATTGATGACCTGTAAAAAGTTAACGCAAAGTTGGGTACCTTCTATA
GACATCCTAGCATAAAAATAAAAATAAAAATCAAACGATTCTAGCTGATCAAAATATTGAATGAGGCATCAGTCATTAGA
ATGGAATGCGTGTTACCTTTTTTTTTAAATTTCAACGGGGTTAATCAGTAGTGGACGAAGCACGCGGGTTACGTCTTACG
TGCGTATGCTACTAGTAGAAGAAGAGGATAAAATCACACTAGTTGAATATATTTTTCTTTTTGATTGAAACGGATAGTTG
AATTATACGAACGTGGAGCTAAAACGAATGTATTTTACTG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------CCAGTGCCATGTATGTATGCATGTCAACACACTGAGGCTCGACACGTCGTGGGTATTGAGGCG
GGCCCACACGGCGTCGCTTTGCTTCCCTCTGTCTTGCTCCAATAATCGCCTCGGCTTGTTAAAAGGCTCCACATGCAGCC
GCCTCCAATTAGCTCCAACACGACCCTCTCACATAGCTATCGGGAGCAGGGAAGGAAGCACCTTCAGCATCCGTTTGTCT
AGCGACGGTGAGTCACTCCCCTCTCCCTCTTAACTTTGTCTTTCGATGTGGTCATCCGTTTCCTCCATCTCCATCGAATG
TTGGAAACCTTCACGCTGGACCGTCTTGCTCAAGCTGTTCGTCTAGGTAGCTA---------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr5B_766
--------------------------------------------------------------------------------
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--------------G--TAGTTAACTTAAG--GTAGAATACATTGTTG-----TA-TTTTAATTGATAGCTTTCCAGTTG
CAGCAAGCTAGTACAGTAGAT-----------------------------------------------------------
--------------------------------------------------------------------------------
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-GCGTTTAGTTTGCCAGCACCTAGCAACTCCACACCCACGGACCTATATATA--ACGTGTGC------CATCCATATGCC
ATTGCCATATCAACTCGTTCA-----TTCTCCATTCTCTCAC----ACGACAACCAAACTAGC---TCGAGGTC--TACG
AAGGACAGGAAA---TCGGAGG---ATCAAAC------------TCCATGGGAGCGGGGATGAAGCGCGCGAGGGACGAG
GAGGTAT---TGTCACTGGCGCTGGAACTGACCACGGACTCATCGACGTCGTCCACGACTTCGACGGACACAA---CCAG
GTCACCCGCCAAGAAAGCACGGCGACGCACGAGCGGCGCCGTGGTGGCGACGTCGGGTGAGGGGGAGTTTGTGTGCAAGA
CGTGCGGCCGTGCCTTCGCGTCGTTCCAGGCGCTCGGCGGGCACCGGACGAGCCACCTTCGGGGCCGCCACGAGCTGGAG
CTCGGCGTCCGCATCGCCAGGGATATCAGAGAGCGGAGAAGACGGGAGAACAAGCGGCACGAGTGCAGCATCTGCGGCAT
GGGGTTCGAGACGGGCCAGGCGCTCGGGGGACACATGAGGCGTCACCGCGAGGAGATGGTACTGCGCGGCC---GCGG--
-CGACGACGACCAGTGGGTGTGGCGCGGCGTCGCGCTACTGCCGGGTCAGGTGATGACGGGGCACCAGGCCACTGGCAAC
CAGCCGCCCGTCTTGCTCAAGCTGTTCGTCTAGTTTGTTTGTTTGTCTGTTTTTTGCGAAATGTTCTCCTAGGTAGCTAG
----CTGGAAAGAAGGAAGTCGATACGTTTTTG------TTTCTTGATTGATGCGTGAAGCACATGTAAATTTGTTTGAT
TAGAATGAGATATATAAGTTCACTATTCGATCTTGTAAACATAAAGCTCATATGTACCCCCTCCGTTCACTGTTTCATCT
TGTAAACACAAAGTCTTTTAAGAGAATCCACGACTATATACGGACGTATATAGACA--------------------TATT
TTACAGTGTAGTTTCATTAATTTTATTCTGTATGTAGTTCATAATGGAA---TCTCTAGAAACTTATATTTAGGAACAGA
TG---------------GATTATGTACTACGCACAAGTGAGGGTTGTTGGCGTTTTGAAAT-ATTGATGAATGTTGCAAA
GGATCGTTCAGTTTTTGAACCTTATACACCTTTGGACGGAATTCATTAATTCCATTGGCAGCTCGGAGG-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------A
AAATCCGTTCTTCATTCGGCAATT--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------TGATCTAAAAATGTTGTTCTGGATCAGTAATCAAA
TTGCGGTTCGACGAATATGATCGATGTACCCAGAGTATATATGCTACAGGCTGGCAGTGTTCCATTTGCTGCGCCACA--
-CCGGCC-ATCTATG-----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GACCGAAGGCCACACTGTACCCTAGCAGTGCTGGCCGGCCAATAGGACTTTTG
TCGCCTCCATGCCTGCGTAATCGTCG-----TAAACGATGAGATTGCAGCGGTACTTGCTTACGCCTTGACTC-------
---------------------CAGTTTCATTCAAACGTAGCTTGCGCTCAAAGCTGCGATCTAGCTAGCCCGGCCGCCAC
AGTACCTGAATTGAACGCTGAACATGGATG--------------------------------------------------
-------------------------------------------TCGAGTAATCTACTTGTGCCCCAGCTGAGCAGTGAGA
ACGCGTGTACTACTAGTTAGTTGATTCTCGGATATATGCTGGACTGCAGGTTCGGGCAAATTTCGTGCATGACCGGACAT
ATACAAGAAGGATGTCTCTGTCCAAC---TAT------------------------------------------------
--------------------------------------------------------------------------------
-----------CTCTTGAGTCTGGACAGTGGACACTA-GTTGGGACTGTTAAGCATGTCCAAACTGGGAATGCAAAGAAA
AATATGTCGACATGTCCATGTCCTGGGCATCC--AACCTGCTGATCGAAGACGAGGAGACTTGACCCGTGCATATCTAAG
TCTAACGGTTTTGGACTGATTGATGGGATAA-TACCCATACTGGTCTAGAAGTGTGCACAGTAGCACTCACACGGTAGGG
--------------------------------------------------------------------------------
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----------------------------------------
>chr5A_936
CACACGAC------------------------------------------------------------------------
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----------------------------------------------------ACCAAGCTAAGCTGTGGAAGCC--TACG
AAGGACGGGAAA---TCGAGGG---ATCAAAATCCACAAGTGAATCCATGGGAGCTGGGATGAAGCGCGGGAGGAAGGAG
GAGCCAACCGTGTCGTTGGCGTTGTCGCTGAGCCCGGACTCCTCGACGTCTTCCGTAACGTCGGCCGATTCGGGTGCCGG
TGCGCAGGCCAAG------------CGCAAGCGGGGTGCCGTGGTGGCGACGTCGGGTGAGGGGGAGTTCGTGTGCAAGA
CTTGCGGGCGGGCCTTCCCGTCGTTCCAGGCGTTGGGCGGGCACCGGACCAGCCACCTCCGCGGCCGCCACGGGCTGGAG
CTCGGCGTCGGCGTCGCCAGAGCCATCAAGGAACGGAAAAGGCGTGAGGAGAAACAACACGAGTGCCACATCTGCGGACT
CGGCTTCGAGACGGGCCAGGCGCTCGGGGGGCACATGAGGCGGCACCGTGAGCAGATGGCACCGCGCGGCG---CCGA--
-CGA------------------TCGCGGGGTCGCGCTGCTGCCGGATCAGGATGTGGCGGGGCATCATGCCGCCGCCGAC
CAGCCCCCGGTCTTGCTCGAGCTGTTCGTCTAG---------------------------------------G-------
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----------------------------------------
>SNPs
-----------------------------------S--------S----S----------------------S----S--
------------S---------------------------------------S-S---SS--------------------
----------------------------S---------------------------------------------------
-------------S-------------------S---------S-----S------------------------------
S-------------------------------------------------------------------------------
-------------S------------------------------------------------------------S-S-SS
SSS-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S------------------SSSSS----------------S-----------S-----S----SS-SSSS-----
--------------------------------------------------------------------------------
---------SS--------------S------------------------------------------------------
-----------------------------------S--------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------------------
-------------------S---S--------------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------S---SS---------------------------------------------S----S
----------------------------------------------------------------------------S--S
--SSS-SSSSSSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-----------------------------------------------------------------------S------S-
-S---S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
---------------------------------------S-----------------------------------S--S-
S-S-S--S---------------------SSSS-SS-SSS-SSSSS-SSSSSSSSS-SSSSSSSS-SS-SSSSSSSSSSS
SSSSSSSS-SSSS-SS-SSS-SS-SSS-SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-------------------------S-S----------S---S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-S-S--SS-S---S-S-S-
-S-SS-----S--------------------------S-------------S-------------S--------------
----------------------------------------------S-----------------------S---------
-----S---------S-------------------------------------S------S----------SS----S--
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_1415
--------------------------------------------------------------------------------
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-----------------------------------ATTCCCCCACACAGACAACG-------------------------
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----------------------------------------
>reverse_3429
--------------------------------------------------------------------------------
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--------------------------------------------------------------------ACCGTCATGCTT
CCATGGTT------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------
