Multiple sequence alignment - TraesCS5D01G424200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G424200 chr5D 100.000 3573 0 0 1 3573 483700435 483704007 0.000000e+00 6599.0
1 TraesCS5D01G424200 chr5D 98.649 74 1 0 1318 1391 233504732 233504805 8.050000e-27 132.0
2 TraesCS5D01G424200 chr5A 90.749 1535 105 19 1390 2907 605159041 605160555 0.000000e+00 2013.0
3 TraesCS5D01G424200 chr5A 90.038 522 34 6 3069 3573 605160554 605161074 0.000000e+00 660.0
4 TraesCS5D01G424200 chr5A 84.921 378 24 13 58 431 605157498 605157846 5.680000e-93 351.0
5 TraesCS5D01G424200 chr5A 86.640 247 15 8 973 1206 605158670 605158911 1.270000e-64 257.0
6 TraesCS5D01G424200 chr5A 91.781 73 2 3 1318 1388 673556002 673556072 8.160000e-17 99.0
7 TraesCS5D01G424200 chr5A 91.935 62 5 0 1251 1312 605158990 605159051 1.770000e-13 87.9
8 TraesCS5D01G424200 chr5B 89.320 1573 92 34 1390 2904 594907262 594908816 0.000000e+00 1905.0
9 TraesCS5D01G424200 chr5B 85.836 353 26 10 977 1316 594906935 594907276 1.580000e-93 353.0
10 TraesCS5D01G424200 chr5B 81.197 351 38 17 431 771 594906404 594906736 1.270000e-64 257.0
11 TraesCS5D01G424200 chr5B 93.413 167 11 0 2905 3071 262533787 262533621 7.660000e-62 248.0
12 TraesCS5D01G424200 chr3D 91.215 535 36 6 1406 1933 7926734 7926204 0.000000e+00 717.0
13 TraesCS5D01G424200 chr3D 92.982 171 11 1 2901 3070 369651900 369651730 7.660000e-62 248.0
14 TraesCS5D01G424200 chr3D 92.899 169 12 0 2902 3070 105119302 105119470 2.760000e-61 246.0
15 TraesCS5D01G424200 chr3D 83.682 239 18 8 976 1208 7927203 7926980 4.680000e-49 206.0
16 TraesCS5D01G424200 chr6A 93.103 174 11 1 2905 3077 458217875 458217702 1.650000e-63 254.0
17 TraesCS5D01G424200 chr6A 90.659 182 15 2 2903 3082 115317246 115317427 1.280000e-59 241.0
18 TraesCS5D01G424200 chr2D 93.373 166 11 0 2905 3070 302648799 302648964 2.760000e-61 246.0
19 TraesCS5D01G424200 chr1A 93.373 166 11 0 2905 3070 295312882 295312717 2.760000e-61 246.0
20 TraesCS5D01G424200 chr6D 91.525 177 14 1 2903 3079 104041159 104041334 3.560000e-60 243.0
21 TraesCS5D01G424200 chr6B 90.608 181 16 1 2891 3070 520090506 520090686 4.610000e-59 239.0
22 TraesCS5D01G424200 chr6B 94.366 71 2 1 1318 1388 690887243 690887175 1.360000e-19 108.0
23 TraesCS5D01G424200 chr2A 98.630 73 1 0 1318 1390 132255966 132256038 2.890000e-26 130.0
24 TraesCS5D01G424200 chr4B 92.593 81 5 1 1318 1397 596641585 596641665 8.110000e-22 115.0
25 TraesCS5D01G424200 chr4B 100.000 29 0 0 1932 1960 131712249 131712277 2.000000e-03 54.7
26 TraesCS5D01G424200 chr7D 94.595 74 2 2 1318 1391 38098180 38098251 2.920000e-21 113.0
27 TraesCS5D01G424200 chr1B 93.151 73 4 1 1318 1390 645257420 645257349 4.880000e-19 106.0
28 TraesCS5D01G424200 chr1D 93.220 59 2 2 1332 1390 396889938 396889994 6.360000e-13 86.1
29 TraesCS5D01G424200 chr4D 86.486 74 5 4 1318 1390 338475847 338475916 3.830000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G424200 chr5D 483700435 483704007 3572 False 6599.000000 6599 100.0000 1 3573 1 chr5D.!!$F2 3572
1 TraesCS5D01G424200 chr5A 605157498 605161074 3576 False 673.780000 2013 88.8566 58 3573 5 chr5A.!!$F2 3515
2 TraesCS5D01G424200 chr5B 594906404 594908816 2412 False 838.333333 1905 85.4510 431 2904 3 chr5B.!!$F1 2473
3 TraesCS5D01G424200 chr3D 7926204 7927203 999 True 461.500000 717 87.4485 976 1933 2 chr3D.!!$R2 957

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
30 31 0.031721 GTCGTCCCGTGGTATCATCC 59.968 60.0 0.0 0.0 0.0 3.51 F
588 646 0.031994 CGGTGGTTTCTGCCCTTTTG 59.968 55.0 0.0 0.0 0.0 2.44 F
885 964 0.110509 GCAATCGCTGTGTCTGTGTG 60.111 55.0 0.0 0.0 34.3 3.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1469 2065 0.250234 TCGAGATGGCCAACCTTGAG 59.750 55.0 10.96 6.41 36.63 3.02 R
2059 2663 0.676736 GAGGGAATACGAGCCTGAGG 59.323 60.0 0.00 0.00 0.00 3.86 R
2715 3360 0.036732 ATGAAAAGTCGAGGCAGCCA 59.963 50.0 15.80 0.00 0.00 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.758737 ATCCTGACCCCGTCGTCC 60.759 66.667 0.00 0.00 34.95 4.79
25 26 3.142838 CCCGTCGTCCCGTGGTAT 61.143 66.667 0.00 0.00 0.00 2.73
26 27 2.410469 CCGTCGTCCCGTGGTATC 59.590 66.667 0.00 0.00 0.00 2.24
27 28 2.409055 CCGTCGTCCCGTGGTATCA 61.409 63.158 0.00 0.00 0.00 2.15
28 29 1.731433 CCGTCGTCCCGTGGTATCAT 61.731 60.000 0.00 0.00 0.00 2.45
29 30 0.317603 CGTCGTCCCGTGGTATCATC 60.318 60.000 0.00 0.00 0.00 2.92
30 31 0.031721 GTCGTCCCGTGGTATCATCC 59.968 60.000 0.00 0.00 0.00 3.51
31 32 1.007734 CGTCCCGTGGTATCATCCG 60.008 63.158 0.00 0.00 0.00 4.18
32 33 1.731433 CGTCCCGTGGTATCATCCGT 61.731 60.000 0.00 0.00 0.00 4.69
33 34 1.321474 GTCCCGTGGTATCATCCGTA 58.679 55.000 0.00 0.00 0.00 4.02
34 35 1.268899 GTCCCGTGGTATCATCCGTAG 59.731 57.143 0.00 0.00 0.00 3.51
35 36 1.133699 TCCCGTGGTATCATCCGTAGT 60.134 52.381 0.00 0.00 0.00 2.73
36 37 1.268899 CCCGTGGTATCATCCGTAGTC 59.731 57.143 0.00 0.00 0.00 2.59
37 38 1.069432 CCGTGGTATCATCCGTAGTCG 60.069 57.143 0.00 0.00 0.00 4.18
38 39 1.600957 CGTGGTATCATCCGTAGTCGT 59.399 52.381 0.00 0.00 35.01 4.34
39 40 2.349249 CGTGGTATCATCCGTAGTCGTC 60.349 54.545 0.00 0.00 35.01 4.20
40 41 2.615447 GTGGTATCATCCGTAGTCGTCA 59.385 50.000 0.00 0.00 35.01 4.35
41 42 3.065786 GTGGTATCATCCGTAGTCGTCAA 59.934 47.826 0.00 0.00 35.01 3.18
42 43 3.695556 TGGTATCATCCGTAGTCGTCAAA 59.304 43.478 0.00 0.00 35.01 2.69
43 44 4.040376 GGTATCATCCGTAGTCGTCAAAC 58.960 47.826 0.00 0.00 35.01 2.93
44 45 2.642139 TCATCCGTAGTCGTCAAACC 57.358 50.000 0.00 0.00 35.01 3.27
45 46 1.135603 TCATCCGTAGTCGTCAAACCG 60.136 52.381 0.00 0.00 35.01 4.44
46 47 0.883833 ATCCGTAGTCGTCAAACCGT 59.116 50.000 0.00 0.00 35.01 4.83
47 48 0.040157 TCCGTAGTCGTCAAACCGTG 60.040 55.000 0.00 0.00 35.01 4.94
48 49 1.611592 CCGTAGTCGTCAAACCGTGC 61.612 60.000 0.00 0.00 35.01 5.34
49 50 0.935831 CGTAGTCGTCAAACCGTGCA 60.936 55.000 0.00 0.00 0.00 4.57
50 51 1.425412 GTAGTCGTCAAACCGTGCAT 58.575 50.000 0.00 0.00 0.00 3.96
51 52 1.389106 GTAGTCGTCAAACCGTGCATC 59.611 52.381 0.00 0.00 0.00 3.91
52 53 0.949105 AGTCGTCAAACCGTGCATCC 60.949 55.000 0.00 0.00 0.00 3.51
53 54 0.949105 GTCGTCAAACCGTGCATCCT 60.949 55.000 0.00 0.00 0.00 3.24
54 55 0.669318 TCGTCAAACCGTGCATCCTC 60.669 55.000 0.00 0.00 0.00 3.71
55 56 1.787847 GTCAAACCGTGCATCCTCG 59.212 57.895 0.00 0.00 0.00 4.63
56 57 0.949105 GTCAAACCGTGCATCCTCGT 60.949 55.000 0.00 0.00 0.00 4.18
65 66 2.898738 CATCCTCGTGGCTGAGCT 59.101 61.111 3.72 0.00 34.56 4.09
93 94 3.054503 CTGGCCACAGCAGAGCAC 61.055 66.667 0.00 0.00 42.56 4.40
95 96 2.360852 GGCCACAGCAGAGCACAT 60.361 61.111 0.00 0.00 42.56 3.21
98 99 1.919956 GCCACAGCAGAGCACATCAC 61.920 60.000 0.00 0.00 39.53 3.06
99 100 1.632948 CCACAGCAGAGCACATCACG 61.633 60.000 0.00 0.00 0.00 4.35
100 101 2.031516 ACAGCAGAGCACATCACGC 61.032 57.895 0.00 0.00 0.00 5.34
101 102 2.030958 CAGCAGAGCACATCACGCA 61.031 57.895 0.00 0.00 32.50 5.24
102 103 1.740664 AGCAGAGCACATCACGCAG 60.741 57.895 0.00 0.00 32.50 5.18
103 104 2.747822 GCAGAGCACATCACGCAGG 61.748 63.158 0.00 0.00 0.00 4.85
104 105 2.435586 AGAGCACATCACGCAGGC 60.436 61.111 0.00 0.00 0.00 4.85
105 106 2.743538 GAGCACATCACGCAGGCA 60.744 61.111 0.00 0.00 0.00 4.75
106 107 2.281692 AGCACATCACGCAGGCAA 60.282 55.556 0.00 0.00 0.00 4.52
165 166 2.616363 CCACCCCGACCCCCTATA 59.384 66.667 0.00 0.00 0.00 1.31
167 168 0.908180 CCACCCCGACCCCCTATATC 60.908 65.000 0.00 0.00 0.00 1.63
172 173 1.358103 CCCGACCCCCTATATCAGAGA 59.642 57.143 0.00 0.00 0.00 3.10
196 202 2.560119 CGAGCGAGAGGGCATAGCT 61.560 63.158 0.00 0.00 41.29 3.32
197 203 1.237954 CGAGCGAGAGGGCATAGCTA 61.238 60.000 0.00 0.00 38.39 3.32
198 204 0.525761 GAGCGAGAGGGCATAGCTAG 59.474 60.000 0.00 0.00 38.39 3.42
199 205 1.080161 GCGAGAGGGCATAGCTAGC 60.080 63.158 6.62 6.62 0.00 3.42
250 257 1.967779 CCCCGAGAAACCCACAAATTT 59.032 47.619 0.00 0.00 0.00 1.82
264 271 4.037923 CCACAAATTTGCAGAACCTACACT 59.962 41.667 18.12 0.00 0.00 3.55
272 279 0.966920 AGAACCTACACTGGGTCACG 59.033 55.000 1.28 0.00 45.90 4.35
273 280 0.037605 GAACCTACACTGGGTCACGG 60.038 60.000 0.00 0.00 43.10 4.94
274 281 1.477685 AACCTACACTGGGTCACGGG 61.478 60.000 0.00 0.00 35.83 5.28
275 282 2.264794 CTACACTGGGTCACGGGC 59.735 66.667 0.00 0.00 0.00 6.13
276 283 3.310860 CTACACTGGGTCACGGGCC 62.311 68.421 0.00 0.00 0.00 5.80
383 391 1.681486 CCTCGCCTCCTCCTTCCTTC 61.681 65.000 0.00 0.00 0.00 3.46
412 420 2.249413 CTGCCTGCCTCATCGTCCTT 62.249 60.000 0.00 0.00 0.00 3.36
416 424 1.110442 CTGCCTCATCGTCCTTCTCT 58.890 55.000 0.00 0.00 0.00 3.10
431 439 2.511829 TCTCTCTCGTCGCCTCGG 60.512 66.667 0.00 0.00 0.00 4.63
588 646 0.031994 CGGTGGTTTCTGCCCTTTTG 59.968 55.000 0.00 0.00 0.00 2.44
589 647 1.119684 GGTGGTTTCTGCCCTTTTGT 58.880 50.000 0.00 0.00 0.00 2.83
590 648 1.202521 GGTGGTTTCTGCCCTTTTGTG 60.203 52.381 0.00 0.00 0.00 3.33
593 651 3.131400 GTGGTTTCTGCCCTTTTGTGTTA 59.869 43.478 0.00 0.00 0.00 2.41
597 655 5.010213 GGTTTCTGCCCTTTTGTGTTATGTA 59.990 40.000 0.00 0.00 0.00 2.29
610 668 9.632807 TTTTGTGTTATGTAATGTAATGGCTTC 57.367 29.630 0.00 0.00 0.00 3.86
643 713 0.325860 AATTGCCAGGGATGCATGGT 60.326 50.000 19.49 0.00 38.76 3.55
666 736 4.951963 GCGGCGATTCCTCCTCGG 62.952 72.222 12.98 0.00 36.65 4.63
687 757 2.162008 GCGGAATCGGATCTACTAGGAC 59.838 54.545 0.00 0.00 36.79 3.85
688 758 3.677190 CGGAATCGGATCTACTAGGACT 58.323 50.000 0.00 0.00 0.00 3.85
689 759 4.829968 CGGAATCGGATCTACTAGGACTA 58.170 47.826 0.00 0.00 0.00 2.59
702 772 4.048600 ACTAGGACTAGGAGAGATGGTGA 58.951 47.826 10.81 0.00 37.49 4.02
725 802 1.264826 GGCTTTTCGTTCCTGCGTTAA 59.735 47.619 0.00 0.00 0.00 2.01
726 803 2.095415 GGCTTTTCGTTCCTGCGTTAAT 60.095 45.455 0.00 0.00 0.00 1.40
727 804 3.561503 GCTTTTCGTTCCTGCGTTAATT 58.438 40.909 0.00 0.00 0.00 1.40
728 805 4.378666 GGCTTTTCGTTCCTGCGTTAATTA 60.379 41.667 0.00 0.00 0.00 1.40
729 806 5.329493 GCTTTTCGTTCCTGCGTTAATTAT 58.671 37.500 0.00 0.00 0.00 1.28
730 807 5.798434 GCTTTTCGTTCCTGCGTTAATTATT 59.202 36.000 0.00 0.00 0.00 1.40
731 808 6.307077 GCTTTTCGTTCCTGCGTTAATTATTT 59.693 34.615 0.00 0.00 0.00 1.40
732 809 7.482428 GCTTTTCGTTCCTGCGTTAATTATTTA 59.518 33.333 0.00 0.00 0.00 1.40
733 810 8.658171 TTTTCGTTCCTGCGTTAATTATTTAC 57.342 30.769 0.00 0.00 0.00 2.01
782 859 1.203994 CGGTGTAATTCAGGTCCGAGT 59.796 52.381 0.00 0.00 35.95 4.18
803 880 2.109425 GTGTGGACGATAAAAGGGCT 57.891 50.000 0.00 0.00 0.00 5.19
804 881 3.255969 GTGTGGACGATAAAAGGGCTA 57.744 47.619 0.00 0.00 0.00 3.93
805 882 3.195661 GTGTGGACGATAAAAGGGCTAG 58.804 50.000 0.00 0.00 0.00 3.42
807 884 3.195661 GTGGACGATAAAAGGGCTAGTG 58.804 50.000 0.00 0.00 0.00 2.74
808 885 2.835764 TGGACGATAAAAGGGCTAGTGT 59.164 45.455 0.00 0.00 0.00 3.55
809 886 3.262405 TGGACGATAAAAGGGCTAGTGTT 59.738 43.478 0.00 0.00 0.00 3.32
829 908 1.512926 AGTGCTGTAAGAAACGCCTG 58.487 50.000 0.00 0.00 34.07 4.85
830 909 1.070134 AGTGCTGTAAGAAACGCCTGA 59.930 47.619 0.00 0.00 34.07 3.86
833 912 1.079503 CTGTAAGAAACGCCTGAGGC 58.920 55.000 14.89 14.89 40.75 4.70
854 933 2.436292 CAGTGCTCTGCTCTGCCC 60.436 66.667 2.32 0.00 41.87 5.36
860 939 1.153005 CTCTGCTCTGCCCAATCCC 60.153 63.158 0.00 0.00 0.00 3.85
863 942 2.832201 GCTCTGCCCAATCCCTGC 60.832 66.667 0.00 0.00 0.00 4.85
884 963 2.238353 GCAATCGCTGTGTCTGTGT 58.762 52.632 0.00 0.00 34.30 3.72
885 964 0.110509 GCAATCGCTGTGTCTGTGTG 60.111 55.000 0.00 0.00 34.30 3.82
886 965 1.501169 CAATCGCTGTGTCTGTGTGA 58.499 50.000 0.00 0.00 0.00 3.58
887 966 1.866601 CAATCGCTGTGTCTGTGTGAA 59.133 47.619 0.00 0.00 0.00 3.18
888 967 1.788258 ATCGCTGTGTCTGTGTGAAG 58.212 50.000 0.00 0.00 0.00 3.02
889 968 0.249447 TCGCTGTGTCTGTGTGAAGG 60.249 55.000 0.00 0.00 0.00 3.46
890 969 0.249447 CGCTGTGTCTGTGTGAAGGA 60.249 55.000 0.00 0.00 0.00 3.36
891 970 1.606480 CGCTGTGTCTGTGTGAAGGAT 60.606 52.381 0.00 0.00 0.00 3.24
892 971 1.802960 GCTGTGTCTGTGTGAAGGATG 59.197 52.381 0.00 0.00 0.00 3.51
893 972 1.802960 CTGTGTCTGTGTGAAGGATGC 59.197 52.381 0.00 0.00 0.00 3.91
917 996 6.016024 GCATGGTTATGATTTATGAAGCCTGA 60.016 38.462 0.00 0.00 36.36 3.86
922 1001 2.938451 TGATTTATGAAGCCTGACTGCG 59.062 45.455 0.00 0.00 36.02 5.18
924 1003 3.603158 TTTATGAAGCCTGACTGCGTA 57.397 42.857 0.00 0.00 36.02 4.42
925 1004 2.579207 TATGAAGCCTGACTGCGTAC 57.421 50.000 0.00 0.00 36.02 3.67
933 1033 1.058590 CTGACTGCGTACGTCGTGTC 61.059 60.000 17.90 17.95 41.42 3.67
935 1035 1.325904 GACTGCGTACGTCGTGTCAC 61.326 60.000 17.90 0.00 41.07 3.67
955 1055 3.663025 ACGTGTGATCATGTGTGATTGA 58.337 40.909 0.00 0.00 44.96 2.57
956 1056 3.433274 ACGTGTGATCATGTGTGATTGAC 59.567 43.478 0.00 0.00 44.96 3.18
957 1057 3.681417 CGTGTGATCATGTGTGATTGACT 59.319 43.478 0.00 0.00 44.96 3.41
958 1058 4.435121 CGTGTGATCATGTGTGATTGACTG 60.435 45.833 0.00 0.00 44.96 3.51
959 1059 4.692155 GTGTGATCATGTGTGATTGACTGA 59.308 41.667 0.00 0.00 44.96 3.41
960 1060 5.353400 GTGTGATCATGTGTGATTGACTGAT 59.647 40.000 0.00 0.00 44.96 2.90
961 1061 5.941647 TGTGATCATGTGTGATTGACTGATT 59.058 36.000 0.00 0.00 44.96 2.57
962 1062 6.128117 TGTGATCATGTGTGATTGACTGATTG 60.128 38.462 0.00 0.00 44.96 2.67
964 1064 4.073549 TCATGTGTGATTGACTGATTGCA 58.926 39.130 0.00 0.00 0.00 4.08
965 1065 3.902261 TGTGTGATTGACTGATTGCAC 57.098 42.857 0.00 0.00 0.00 4.57
966 1066 2.223845 TGTGTGATTGACTGATTGCACG 59.776 45.455 0.00 0.00 0.00 5.34
967 1067 2.224079 GTGTGATTGACTGATTGCACGT 59.776 45.455 0.00 0.00 0.00 4.49
968 1068 3.431912 GTGTGATTGACTGATTGCACGTA 59.568 43.478 0.00 0.00 0.00 3.57
969 1069 3.431912 TGTGATTGACTGATTGCACGTAC 59.568 43.478 0.00 0.00 0.00 3.67
970 1070 2.666022 TGATTGACTGATTGCACGTACG 59.334 45.455 15.01 15.01 0.00 3.67
971 1071 2.143008 TTGACTGATTGCACGTACGT 57.857 45.000 16.72 16.72 0.00 3.57
974 1371 0.511221 ACTGATTGCACGTACGTTGC 59.489 50.000 25.69 25.69 0.00 4.17
1005 1406 3.375699 TGGGGAAGAGTAGAAGATGGTC 58.624 50.000 0.00 0.00 0.00 4.02
1017 1418 3.325135 AGAAGATGGTCGTCAAGGAGTTT 59.675 43.478 0.00 0.00 0.00 2.66
1073 1482 5.843421 AGGTACCATCTGCTCTCTCAATATT 59.157 40.000 15.94 0.00 0.00 1.28
1144 1564 3.006752 TGTGCACATTTCCCATTCCTTTC 59.993 43.478 17.42 0.00 0.00 2.62
1146 1566 2.093500 GCACATTTCCCATTCCTTTCCC 60.093 50.000 0.00 0.00 0.00 3.97
1154 1574 4.672899 TCCCATTCCTTTCCCACTTTAAG 58.327 43.478 0.00 0.00 0.00 1.85
1161 1581 4.577283 TCCTTTCCCACTTTAAGTTTGTCG 59.423 41.667 0.00 0.00 0.00 4.35
1170 1590 6.970043 CCACTTTAAGTTTGTCGTCATTTTGA 59.030 34.615 0.00 0.00 0.00 2.69
1171 1591 7.165812 CCACTTTAAGTTTGTCGTCATTTTGAG 59.834 37.037 0.00 0.00 0.00 3.02
1172 1592 6.691388 ACTTTAAGTTTGTCGTCATTTTGAGC 59.309 34.615 0.00 0.00 0.00 4.26
1173 1593 4.900635 AAGTTTGTCGTCATTTTGAGCT 57.099 36.364 0.00 0.00 0.00 4.09
1175 1595 4.601019 AGTTTGTCGTCATTTTGAGCTTG 58.399 39.130 0.00 0.00 0.00 4.01
1176 1596 4.096382 AGTTTGTCGTCATTTTGAGCTTGT 59.904 37.500 0.00 0.00 0.00 3.16
1177 1597 3.607422 TGTCGTCATTTTGAGCTTGTG 57.393 42.857 0.00 0.00 0.00 3.33
1178 1598 2.290367 TGTCGTCATTTTGAGCTTGTGG 59.710 45.455 0.00 0.00 0.00 4.17
1179 1599 1.266718 TCGTCATTTTGAGCTTGTGGC 59.733 47.619 0.00 0.00 42.19 5.01
1180 1600 1.001487 CGTCATTTTGAGCTTGTGGCA 60.001 47.619 0.00 0.00 44.79 4.92
1182 1602 3.119884 CGTCATTTTGAGCTTGTGGCATA 60.120 43.478 0.00 0.00 44.79 3.14
1183 1603 4.168760 GTCATTTTGAGCTTGTGGCATAC 58.831 43.478 0.00 0.00 44.79 2.39
1184 1604 3.825585 TCATTTTGAGCTTGTGGCATACA 59.174 39.130 0.00 0.00 44.79 2.29
1185 1605 3.921119 TTTTGAGCTTGTGGCATACAG 57.079 42.857 0.00 0.00 44.79 2.74
1186 1606 1.167851 TTGAGCTTGTGGCATACAGC 58.832 50.000 7.28 7.28 44.79 4.40
1217 1789 1.881973 TGAGGTGCTGAAATGCTGAAC 59.118 47.619 0.00 0.00 0.00 3.18
1224 1796 3.243168 TGCTGAAATGCTGAACTGTCAAC 60.243 43.478 0.00 0.00 31.88 3.18
1249 1821 2.664402 AAGTGATGCTTGGTGGACTT 57.336 45.000 0.00 0.00 35.80 3.01
1256 1842 1.419762 TGCTTGGTGGACTTTGCTCTA 59.580 47.619 0.00 0.00 0.00 2.43
1316 1902 8.354426 TGTGGTTTTACAAGCTTTAACTTATCC 58.646 33.333 0.00 0.00 0.00 2.59
1317 1903 7.536281 GTGGTTTTACAAGCTTTAACTTATCCG 59.464 37.037 0.00 0.00 0.00 4.18
1318 1904 7.025365 GGTTTTACAAGCTTTAACTTATCCGG 58.975 38.462 0.00 0.00 0.00 5.14
1319 1905 7.308770 GGTTTTACAAGCTTTAACTTATCCGGT 60.309 37.037 0.00 0.00 0.00 5.28
1320 1906 6.730960 TTACAAGCTTTAACTTATCCGGTG 57.269 37.500 0.00 0.00 0.00 4.94
1321 1907 4.007659 ACAAGCTTTAACTTATCCGGTGG 58.992 43.478 0.00 0.00 0.00 4.61
1322 1908 4.258543 CAAGCTTTAACTTATCCGGTGGA 58.741 43.478 0.00 0.00 35.55 4.02
1323 1909 4.138487 AGCTTTAACTTATCCGGTGGAG 57.862 45.455 0.00 0.00 34.05 3.86
1324 1910 3.118371 AGCTTTAACTTATCCGGTGGAGG 60.118 47.826 0.00 0.00 34.05 4.30
1325 1911 2.994186 TTAACTTATCCGGTGGAGGC 57.006 50.000 0.00 0.00 34.05 4.70
1326 1912 2.170012 TAACTTATCCGGTGGAGGCT 57.830 50.000 0.00 0.00 34.05 4.58
1327 1913 1.286248 AACTTATCCGGTGGAGGCTT 58.714 50.000 0.00 0.00 34.05 4.35
1328 1914 0.831307 ACTTATCCGGTGGAGGCTTC 59.169 55.000 0.00 0.00 34.05 3.86
1329 1915 1.123928 CTTATCCGGTGGAGGCTTCT 58.876 55.000 0.00 0.00 34.05 2.85
1330 1916 2.317040 CTTATCCGGTGGAGGCTTCTA 58.683 52.381 0.00 0.00 34.05 2.10
1331 1917 2.696526 TATCCGGTGGAGGCTTCTAT 57.303 50.000 0.00 0.00 34.05 1.98
1332 1918 1.343069 ATCCGGTGGAGGCTTCTATC 58.657 55.000 0.00 0.00 34.05 2.08
1333 1919 0.759436 TCCGGTGGAGGCTTCTATCC 60.759 60.000 0.00 0.00 36.05 2.59
1334 1920 1.749033 CGGTGGAGGCTTCTATCCC 59.251 63.158 0.00 0.00 34.47 3.85
1335 1921 0.760945 CGGTGGAGGCTTCTATCCCT 60.761 60.000 0.00 0.00 34.47 4.20
1336 1922 1.480683 CGGTGGAGGCTTCTATCCCTA 60.481 57.143 0.00 0.00 34.47 3.53
1337 1923 1.972075 GGTGGAGGCTTCTATCCCTAC 59.028 57.143 0.00 0.00 34.47 3.18
1338 1924 2.426561 GGTGGAGGCTTCTATCCCTACT 60.427 54.545 0.00 0.00 32.98 2.57
1339 1925 2.894765 GTGGAGGCTTCTATCCCTACTC 59.105 54.545 0.00 0.00 32.98 2.59
1340 1926 2.792370 TGGAGGCTTCTATCCCTACTCT 59.208 50.000 0.00 0.00 32.98 3.24
1341 1927 3.207777 TGGAGGCTTCTATCCCTACTCTT 59.792 47.826 0.00 0.00 32.98 2.85
1342 1928 3.830178 GGAGGCTTCTATCCCTACTCTTC 59.170 52.174 0.00 0.00 0.00 2.87
1343 1929 4.448640 GGAGGCTTCTATCCCTACTCTTCT 60.449 50.000 0.00 0.00 0.00 2.85
1344 1930 5.144832 GAGGCTTCTATCCCTACTCTTCTT 58.855 45.833 0.00 0.00 0.00 2.52
1345 1931 5.144832 AGGCTTCTATCCCTACTCTTCTTC 58.855 45.833 0.00 0.00 0.00 2.87
1346 1932 5.103258 AGGCTTCTATCCCTACTCTTCTTCT 60.103 44.000 0.00 0.00 0.00 2.85
1347 1933 6.103501 AGGCTTCTATCCCTACTCTTCTTCTA 59.896 42.308 0.00 0.00 0.00 2.10
1348 1934 6.951778 GGCTTCTATCCCTACTCTTCTTCTAT 59.048 42.308 0.00 0.00 0.00 1.98
1349 1935 7.122204 GGCTTCTATCCCTACTCTTCTTCTATC 59.878 44.444 0.00 0.00 0.00 2.08
1350 1936 7.668052 GCTTCTATCCCTACTCTTCTTCTATCA 59.332 40.741 0.00 0.00 0.00 2.15
1351 1937 9.581289 CTTCTATCCCTACTCTTCTTCTATCAA 57.419 37.037 0.00 0.00 0.00 2.57
1371 1957 5.650543 TCAATATATGATATGCACGCTCGT 58.349 37.500 0.00 0.00 31.50 4.18
1372 1958 5.516339 TCAATATATGATATGCACGCTCGTG 59.484 40.000 17.09 17.09 40.06 4.35
1383 1969 3.000082 CACGCTCGTGCATATTCTAGA 58.000 47.619 9.55 0.00 39.39 2.43
1384 1970 3.372060 CACGCTCGTGCATATTCTAGAA 58.628 45.455 7.82 7.82 39.39 2.10
1385 1971 3.796717 CACGCTCGTGCATATTCTAGAAA 59.203 43.478 9.71 0.00 39.39 2.52
1386 1972 4.267690 CACGCTCGTGCATATTCTAGAAAA 59.732 41.667 9.71 0.00 39.39 2.29
1387 1973 4.868171 ACGCTCGTGCATATTCTAGAAAAA 59.132 37.500 9.71 1.10 39.64 1.94
1454 2044 5.693555 AGTAAACTACTACTTTTGACCGTGC 59.306 40.000 0.00 0.00 37.23 5.34
1456 2046 3.650139 ACTACTACTTTTGACCGTGCTG 58.350 45.455 0.00 0.00 0.00 4.41
1469 2065 1.665735 CCGTGCTGTGTATTTTGTGGC 60.666 52.381 0.00 0.00 0.00 5.01
1471 2067 2.665519 CGTGCTGTGTATTTTGTGGCTC 60.666 50.000 0.00 0.00 0.00 4.70
1593 2189 0.249699 CCAATGCGCTCCGGTGTATA 60.250 55.000 9.73 0.00 0.00 1.47
1722 2320 1.878656 GCTACCTGTCGTCTGCTGGT 61.879 60.000 0.00 0.00 40.49 4.00
1736 2334 0.746659 GCTGGTTGTTTGCCAAGTCT 59.253 50.000 0.00 0.00 35.32 3.24
1770 2368 5.491982 GTCACACCATTCAGGAAGTAATCT 58.508 41.667 0.00 0.00 41.22 2.40
1787 2385 7.146916 AAGTAATCTTGATGGCCCTATTTGGG 61.147 42.308 0.00 0.00 44.66 4.12
1856 2454 2.539953 CCACATCGAGACGAGAAGCTAC 60.540 54.545 0.00 0.00 39.91 3.58
1924 2523 5.240403 GGGATTCTCCTCATGCTTGTAAATC 59.760 44.000 0.00 3.96 36.57 2.17
1995 2599 3.582242 ATGGATGGTTGGTGCGGCA 62.582 57.895 0.00 0.00 0.00 5.69
2059 2663 3.584848 ACCATAAGCATCCTATGGACTCC 59.415 47.826 14.31 0.00 42.43 3.85
2133 2739 0.921896 ATCCCTGACTGAACCCATGG 59.078 55.000 4.14 4.14 0.00 3.66
2152 2758 6.151663 CATGGAATGGAAATGCTGAACATA 57.848 37.500 0.00 0.00 41.79 2.29
2153 2759 5.581126 TGGAATGGAAATGCTGAACATAC 57.419 39.130 0.00 0.00 38.34 2.39
2154 2760 5.015515 TGGAATGGAAATGCTGAACATACA 58.984 37.500 0.00 0.00 38.34 2.29
2155 2761 5.657745 TGGAATGGAAATGCTGAACATACAT 59.342 36.000 0.00 0.00 38.34 2.29
2167 2774 4.305769 TGAACATACATTTGCAAACTGCC 58.694 39.130 15.41 6.50 44.23 4.85
2189 2804 4.772100 CCTCCATGAAACATAACCCAAAGT 59.228 41.667 0.00 0.00 0.00 2.66
2244 2862 1.246649 ATGTTGTGGCATTCTTCGCA 58.753 45.000 0.00 0.00 0.00 5.10
2403 3023 1.207089 TCCACTTGAAGCCACCGATAG 59.793 52.381 0.00 0.00 0.00 2.08
2420 3040 4.261238 CCGATAGTCTACCAGTAGCTGTTG 60.261 50.000 0.00 0.00 33.32 3.33
2458 3078 0.249073 GACTCGTGATGCAGCGGTAT 60.249 55.000 0.00 0.00 0.00 2.73
2614 3237 5.654603 TGCACGAGGAATTTTAGTAGAGA 57.345 39.130 0.00 0.00 0.00 3.10
2615 3238 5.651530 TGCACGAGGAATTTTAGTAGAGAG 58.348 41.667 0.00 0.00 0.00 3.20
2616 3239 5.185249 TGCACGAGGAATTTTAGTAGAGAGT 59.815 40.000 0.00 0.00 0.00 3.24
2617 3240 6.100668 GCACGAGGAATTTTAGTAGAGAGTT 58.899 40.000 0.00 0.00 0.00 3.01
2636 3260 3.522343 AGTTTGTAGGCTTAGGTTAGGGG 59.478 47.826 0.00 0.00 0.00 4.79
2652 3276 1.252904 GGGGCAAAGCTCATCTTGCA 61.253 55.000 19.56 0.00 34.67 4.08
2673 3297 2.121291 TTCTGCAATGGGTTCGCATA 57.879 45.000 2.97 0.00 34.63 3.14
2715 3360 3.804036 TGTCCTGATGTGAAGACGTTTT 58.196 40.909 0.00 0.00 31.75 2.43
2718 3363 2.350772 CCTGATGTGAAGACGTTTTGGC 60.351 50.000 0.00 0.00 0.00 4.52
2725 3370 1.507141 AAGACGTTTTGGCTGCCTCG 61.507 55.000 21.03 19.31 0.00 4.63
2737 3382 1.373570 CTGCCTCGACTTTTCATCCC 58.626 55.000 0.00 0.00 0.00 3.85
2741 3386 1.373570 CTCGACTTTTCATCCCCAGC 58.626 55.000 0.00 0.00 0.00 4.85
2748 3393 2.071778 TTTCATCCCCAGCAATAGGC 57.928 50.000 0.00 0.00 45.30 3.93
2800 3448 9.799106 AGGATAAATAGTCATATTCCTTGGTTG 57.201 33.333 0.00 0.00 31.02 3.77
2833 3481 9.814899 GATATCTTCTGTCATCTTTCTCTTTGA 57.185 33.333 0.00 0.00 0.00 2.69
2907 3555 3.182967 CTCGTCATGAGTTGCCTTCTAC 58.817 50.000 0.00 0.00 40.03 2.59
2908 3556 2.094182 TCGTCATGAGTTGCCTTCTACC 60.094 50.000 0.00 0.00 0.00 3.18
2909 3557 2.633488 GTCATGAGTTGCCTTCTACCC 58.367 52.381 0.00 0.00 0.00 3.69
2910 3558 1.559682 TCATGAGTTGCCTTCTACCCC 59.440 52.381 0.00 0.00 0.00 4.95
2911 3559 0.919710 ATGAGTTGCCTTCTACCCCC 59.080 55.000 0.00 0.00 0.00 5.40
2912 3560 0.178873 TGAGTTGCCTTCTACCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
2913 3561 1.079825 TGAGTTGCCTTCTACCCCCTA 59.920 52.381 0.00 0.00 0.00 3.53
2914 3562 2.293586 TGAGTTGCCTTCTACCCCCTAT 60.294 50.000 0.00 0.00 0.00 2.57
2915 3563 2.104963 GAGTTGCCTTCTACCCCCTATG 59.895 54.545 0.00 0.00 0.00 2.23
2916 3564 1.844497 GTTGCCTTCTACCCCCTATGT 59.156 52.381 0.00 0.00 0.00 2.29
2917 3565 2.241430 GTTGCCTTCTACCCCCTATGTT 59.759 50.000 0.00 0.00 0.00 2.71
2918 3566 2.124411 TGCCTTCTACCCCCTATGTTC 58.876 52.381 0.00 0.00 0.00 3.18
2919 3567 1.420514 GCCTTCTACCCCCTATGTTCC 59.579 57.143 0.00 0.00 0.00 3.62
2920 3568 2.964803 GCCTTCTACCCCCTATGTTCCT 60.965 54.545 0.00 0.00 0.00 3.36
2921 3569 3.696313 GCCTTCTACCCCCTATGTTCCTA 60.696 52.174 0.00 0.00 0.00 2.94
2922 3570 4.563782 CCTTCTACCCCCTATGTTCCTAA 58.436 47.826 0.00 0.00 0.00 2.69
2923 3571 4.973211 CCTTCTACCCCCTATGTTCCTAAA 59.027 45.833 0.00 0.00 0.00 1.85
2924 3572 5.611408 CCTTCTACCCCCTATGTTCCTAAAT 59.389 44.000 0.00 0.00 0.00 1.40
2925 3573 6.790963 CCTTCTACCCCCTATGTTCCTAAATA 59.209 42.308 0.00 0.00 0.00 1.40
2926 3574 7.461363 CCTTCTACCCCCTATGTTCCTAAATAT 59.539 40.741 0.00 0.00 0.00 1.28
2927 3575 9.556772 CTTCTACCCCCTATGTTCCTAAATATA 57.443 37.037 0.00 0.00 0.00 0.86
2928 3576 9.917118 TTCTACCCCCTATGTTCCTAAATATAA 57.083 33.333 0.00 0.00 0.00 0.98
2929 3577 9.556772 TCTACCCCCTATGTTCCTAAATATAAG 57.443 37.037 0.00 0.00 0.00 1.73
2930 3578 9.335211 CTACCCCCTATGTTCCTAAATATAAGT 57.665 37.037 0.00 0.00 0.00 2.24
2931 3579 8.215954 ACCCCCTATGTTCCTAAATATAAGTC 57.784 38.462 0.00 0.00 0.00 3.01
2932 3580 8.023271 ACCCCCTATGTTCCTAAATATAAGTCT 58.977 37.037 0.00 0.00 0.00 3.24
2933 3581 8.891501 CCCCCTATGTTCCTAAATATAAGTCTT 58.108 37.037 0.00 0.00 0.00 3.01
2955 3603 8.690203 TCTTTCTAGACATTTCAAATGGACAA 57.310 30.769 14.70 0.00 0.00 3.18
2956 3604 8.567948 TCTTTCTAGACATTTCAAATGGACAAC 58.432 33.333 14.70 1.26 0.00 3.32
2957 3605 7.815840 TTCTAGACATTTCAAATGGACAACA 57.184 32.000 14.70 0.00 0.00 3.33
2958 3606 7.815840 TCTAGACATTTCAAATGGACAACAA 57.184 32.000 14.70 0.00 0.00 2.83
2959 3607 8.408043 TCTAGACATTTCAAATGGACAACAAT 57.592 30.769 14.70 0.00 0.00 2.71
2960 3608 9.513906 TCTAGACATTTCAAATGGACAACAATA 57.486 29.630 14.70 0.00 0.00 1.90
2964 3612 9.853555 GACATTTCAAATGGACAACAATATACA 57.146 29.630 14.70 0.00 0.00 2.29
2965 3613 9.859427 ACATTTCAAATGGACAACAATATACAG 57.141 29.630 14.70 0.00 0.00 2.74
2969 3617 8.806429 TCAAATGGACAACAATATACAGATGT 57.194 30.769 0.00 0.00 0.00 3.06
2970 3618 9.898152 TCAAATGGACAACAATATACAGATGTA 57.102 29.630 0.00 0.00 34.67 2.29
2973 3621 9.851686 AATGGACAACAATATACAGATGTATGT 57.148 29.630 14.36 6.14 41.03 2.29
2975 3623 9.981114 TGGACAACAATATACAGATGTATGTAG 57.019 33.333 14.36 7.12 41.03 2.74
2976 3624 9.424319 GGACAACAATATACAGATGTATGTAGG 57.576 37.037 14.36 7.46 41.03 3.18
2977 3625 8.833231 ACAACAATATACAGATGTATGTAGGC 57.167 34.615 14.36 0.00 41.03 3.93
2978 3626 8.428852 ACAACAATATACAGATGTATGTAGGCA 58.571 33.333 14.36 0.00 41.03 4.75
2979 3627 9.440773 CAACAATATACAGATGTATGTAGGCAT 57.559 33.333 14.36 0.00 41.03 4.40
2988 3636 9.935241 ACAGATGTATGTAGGCATATTTTAGAG 57.065 33.333 0.00 0.00 39.49 2.43
2989 3637 9.935241 CAGATGTATGTAGGCATATTTTAGAGT 57.065 33.333 0.00 0.00 39.49 3.24
2990 3638 9.935241 AGATGTATGTAGGCATATTTTAGAGTG 57.065 33.333 0.00 0.00 39.49 3.51
2991 3639 9.712305 GATGTATGTAGGCATATTTTAGAGTGT 57.288 33.333 0.00 0.00 39.49 3.55
2994 3642 9.640963 GTATGTAGGCATATTTTAGAGTGTAGG 57.359 37.037 0.00 0.00 39.49 3.18
2995 3643 7.670605 TGTAGGCATATTTTAGAGTGTAGGT 57.329 36.000 0.00 0.00 0.00 3.08
2996 3644 8.086143 TGTAGGCATATTTTAGAGTGTAGGTT 57.914 34.615 0.00 0.00 0.00 3.50
2997 3645 8.202137 TGTAGGCATATTTTAGAGTGTAGGTTC 58.798 37.037 0.00 0.00 0.00 3.62
2998 3646 7.195374 AGGCATATTTTAGAGTGTAGGTTCA 57.805 36.000 0.00 0.00 0.00 3.18
2999 3647 7.048512 AGGCATATTTTAGAGTGTAGGTTCAC 58.951 38.462 0.00 0.00 38.46 3.18
3009 3657 4.718961 AGTGTAGGTTCACTCATTTTGCT 58.281 39.130 0.00 0.00 44.07 3.91
3010 3658 4.757149 AGTGTAGGTTCACTCATTTTGCTC 59.243 41.667 0.00 0.00 44.07 4.26
3011 3659 4.072131 TGTAGGTTCACTCATTTTGCTCC 58.928 43.478 0.00 0.00 0.00 4.70
3012 3660 2.154462 AGGTTCACTCATTTTGCTCCG 58.846 47.619 0.00 0.00 0.00 4.63
3013 3661 1.880027 GGTTCACTCATTTTGCTCCGT 59.120 47.619 0.00 0.00 0.00 4.69
3014 3662 3.071479 GGTTCACTCATTTTGCTCCGTA 58.929 45.455 0.00 0.00 0.00 4.02
3015 3663 3.689649 GGTTCACTCATTTTGCTCCGTAT 59.310 43.478 0.00 0.00 0.00 3.06
3016 3664 4.437390 GGTTCACTCATTTTGCTCCGTATG 60.437 45.833 0.00 0.00 0.00 2.39
3017 3665 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3018 3666 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3019 3667 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3020 3668 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3021 3669 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3022 3670 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3023 3671 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3024 3672 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3025 3673 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3026 3674 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3027 3675 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3028 3676 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3029 3677 4.460034 TGCTCCGTATGTAGTCACTTGTTA 59.540 41.667 0.00 0.00 0.00 2.41
3030 3678 5.035443 GCTCCGTATGTAGTCACTTGTTAG 58.965 45.833 0.00 0.00 0.00 2.34
3031 3679 5.163683 GCTCCGTATGTAGTCACTTGTTAGA 60.164 44.000 0.00 0.00 0.00 2.10
3032 3680 6.624423 GCTCCGTATGTAGTCACTTGTTAGAA 60.624 42.308 0.00 0.00 0.00 2.10
3033 3681 7.400599 TCCGTATGTAGTCACTTGTTAGAAT 57.599 36.000 0.00 0.00 0.00 2.40
3034 3682 7.478322 TCCGTATGTAGTCACTTGTTAGAATC 58.522 38.462 0.00 0.00 0.00 2.52
3035 3683 7.338703 TCCGTATGTAGTCACTTGTTAGAATCT 59.661 37.037 0.00 0.00 0.00 2.40
3036 3684 7.644551 CCGTATGTAGTCACTTGTTAGAATCTC 59.355 40.741 0.00 0.00 0.00 2.75
3037 3685 8.399425 CGTATGTAGTCACTTGTTAGAATCTCT 58.601 37.037 0.00 0.00 0.00 3.10
3040 3688 9.688091 ATGTAGTCACTTGTTAGAATCTCTAGA 57.312 33.333 0.00 0.00 29.56 2.43
3041 3689 9.516546 TGTAGTCACTTGTTAGAATCTCTAGAA 57.483 33.333 0.00 0.00 29.56 2.10
3044 3692 9.303116 AGTCACTTGTTAGAATCTCTAGAAAGA 57.697 33.333 0.00 0.00 32.30 2.52
3045 3693 9.349145 GTCACTTGTTAGAATCTCTAGAAAGAC 57.651 37.037 0.00 0.00 32.30 3.01
3046 3694 9.303116 TCACTTGTTAGAATCTCTAGAAAGACT 57.697 33.333 0.00 0.00 32.30 3.24
3047 3695 9.921637 CACTTGTTAGAATCTCTAGAAAGACTT 57.078 33.333 0.00 0.00 32.30 3.01
3064 3712 8.049721 AGAAAGACTTATATTTGGGAACAGAGG 58.950 37.037 0.00 0.00 44.54 3.69
3065 3713 6.253946 AGACTTATATTTGGGAACAGAGGG 57.746 41.667 0.00 0.00 44.54 4.30
3066 3714 5.970640 AGACTTATATTTGGGAACAGAGGGA 59.029 40.000 0.00 0.00 44.54 4.20
3067 3715 6.100424 AGACTTATATTTGGGAACAGAGGGAG 59.900 42.308 0.00 0.00 44.54 4.30
3068 3716 5.731678 ACTTATATTTGGGAACAGAGGGAGT 59.268 40.000 0.00 0.00 44.54 3.85
3069 3717 6.906901 ACTTATATTTGGGAACAGAGGGAGTA 59.093 38.462 0.00 0.00 44.54 2.59
3087 3735 6.385467 AGGGAGTATCAGCATAAAGGGATATC 59.615 42.308 0.00 0.00 36.25 1.63
3109 3761 6.849085 TCTGAAGGATATTCTCTGGATAGC 57.151 41.667 0.00 0.00 0.00 2.97
3115 3767 4.940654 GGATATTCTCTGGATAGCCTTTGC 59.059 45.833 0.00 0.00 37.95 3.68
3155 3807 5.811100 TGTACAAACTTGAACGTGTGTGATA 59.189 36.000 0.00 0.00 36.12 2.15
3171 3823 9.265938 CGTGTGTGATAGAAATAAATGAACTTG 57.734 33.333 0.00 0.00 0.00 3.16
3193 3845 9.337396 ACTTGTACATATGAGTGAAGAAACAAA 57.663 29.630 10.38 0.00 0.00 2.83
3195 3847 9.554395 TTGTACATATGAGTGAAGAAACAAAGA 57.446 29.630 10.38 0.00 0.00 2.52
3205 3857 8.185003 AGTGAAGAAACAAAGAAAATTTTCCG 57.815 30.769 24.01 16.29 37.92 4.30
3212 3864 5.113383 ACAAAGAAAATTTTCCGGTGGAAC 58.887 37.500 24.01 0.39 41.87 3.62
3221 3873 7.527568 AATTTTCCGGTGGAACTAATGTTAA 57.472 32.000 0.00 0.00 41.87 2.01
3233 3885 6.422776 AACTAATGTTAAGCCATGAGAACG 57.577 37.500 0.00 0.00 34.15 3.95
3246 3898 2.844946 TGAGAACGTGGCAAATCTGAA 58.155 42.857 3.04 0.00 0.00 3.02
3258 3910 1.386533 AATCTGAAGCCATTCCTGCG 58.613 50.000 0.00 0.00 34.28 5.18
3263 3915 3.976701 AAGCCATTCCTGCGGTCGG 62.977 63.158 0.00 0.00 0.00 4.79
3284 3936 1.151668 GATCGCACATGGGTCATAGC 58.848 55.000 0.00 0.00 0.00 2.97
3301 3953 5.047021 GTCATAGCAATACCTGGCAGAGATA 60.047 44.000 17.94 5.81 0.00 1.98
3316 3968 5.105554 GGCAGAGATACACCCATATACTCAG 60.106 48.000 0.00 0.00 0.00 3.35
3346 3998 3.699067 CCATCTCATTCGCAACAATTCC 58.301 45.455 0.00 0.00 0.00 3.01
3356 4008 2.160615 CGCAACAATTCCGTGGTTCATA 59.839 45.455 0.00 0.00 0.00 2.15
3369 4021 5.298527 CCGTGGTTCATAGTACAGATCTACA 59.701 44.000 0.00 0.00 0.00 2.74
3370 4022 6.431278 CGTGGTTCATAGTACAGATCTACAG 58.569 44.000 0.00 0.00 0.00 2.74
3397 4061 1.022735 GGGCATCAGAAGCACATGAG 58.977 55.000 0.00 0.00 34.91 2.90
3418 4083 5.598830 TGAGACTATTGGTTCAGATACCCTC 59.401 44.000 0.00 0.00 37.39 4.30
3453 4118 4.712051 AAAGGTGCTAGATGCCATATGA 57.288 40.909 3.65 0.00 42.00 2.15
3463 4128 9.135189 TGCTAGATGCCATATGAATTAAGTTTT 57.865 29.630 3.65 0.00 42.00 2.43
3469 4134 8.121305 TGCCATATGAATTAAGTTTTGACAGT 57.879 30.769 3.65 0.00 0.00 3.55
3489 4154 6.879400 ACAGTAACTAGTGGATTTGATCTCC 58.121 40.000 0.00 0.00 0.00 3.71
3494 4159 5.665459 ACTAGTGGATTTGATCTCCGAAAG 58.335 41.667 0.00 0.00 35.41 2.62
3496 4161 5.165961 AGTGGATTTGATCTCCGAAAGAA 57.834 39.130 0.00 0.00 37.61 2.52
3502 4167 2.699954 TGATCTCCGAAAGAAACAGCC 58.300 47.619 0.00 0.00 37.61 4.85
3505 4170 1.416401 TCTCCGAAAGAAACAGCCTGT 59.584 47.619 0.00 0.00 0.00 4.00
3524 4189 6.096846 AGCCTGTTCAAAACAAAATGTAGACT 59.903 34.615 0.00 0.00 41.61 3.24
3551 4216 6.016111 GCTAAATTGCGACTAGAAACAAGTC 58.984 40.000 0.00 0.00 40.01 3.01
3559 4224 5.446741 GCGACTAGAAACAAGTCAACAACAA 60.447 40.000 0.00 0.00 42.91 2.83
3561 4226 6.628856 CGACTAGAAACAAGTCAACAACAATG 59.371 38.462 0.00 0.00 42.91 2.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.758737 GGACGACGGGGTCAGGAT 60.759 66.667 9.81 0.00 38.70 3.24
14 15 1.268899 CTACGGATGATACCACGGGAC 59.731 57.143 0.00 0.00 0.00 4.46
15 16 1.133699 ACTACGGATGATACCACGGGA 60.134 52.381 0.00 0.00 0.00 5.14
16 17 1.268899 GACTACGGATGATACCACGGG 59.731 57.143 0.00 0.00 0.00 5.28
17 18 1.069432 CGACTACGGATGATACCACGG 60.069 57.143 0.00 0.00 35.72 4.94
18 19 1.600957 ACGACTACGGATGATACCACG 59.399 52.381 0.00 0.00 44.46 4.94
19 20 2.615447 TGACGACTACGGATGATACCAC 59.385 50.000 0.00 0.00 44.46 4.16
20 21 2.921821 TGACGACTACGGATGATACCA 58.078 47.619 0.00 0.00 44.46 3.25
21 22 3.976793 TTGACGACTACGGATGATACC 57.023 47.619 0.00 0.00 44.46 2.73
22 23 4.040376 GGTTTGACGACTACGGATGATAC 58.960 47.826 0.00 0.00 44.46 2.24
23 24 3.242837 CGGTTTGACGACTACGGATGATA 60.243 47.826 0.00 0.00 44.46 2.15
24 25 2.479049 CGGTTTGACGACTACGGATGAT 60.479 50.000 0.00 0.00 44.46 2.45
25 26 1.135603 CGGTTTGACGACTACGGATGA 60.136 52.381 0.00 0.00 44.46 2.92
26 27 1.265568 CGGTTTGACGACTACGGATG 58.734 55.000 0.00 0.00 44.46 3.51
27 28 0.883833 ACGGTTTGACGACTACGGAT 59.116 50.000 0.00 0.00 44.46 4.18
28 29 0.040157 CACGGTTTGACGACTACGGA 60.040 55.000 0.00 0.00 44.46 4.69
29 30 1.611592 GCACGGTTTGACGACTACGG 61.612 60.000 0.00 0.00 44.46 4.02
30 31 0.935831 TGCACGGTTTGACGACTACG 60.936 55.000 0.00 0.00 45.75 3.51
31 32 1.389106 GATGCACGGTTTGACGACTAC 59.611 52.381 0.00 0.00 37.61 2.73
32 33 1.670674 GGATGCACGGTTTGACGACTA 60.671 52.381 0.00 0.00 37.61 2.59
33 34 0.949105 GGATGCACGGTTTGACGACT 60.949 55.000 0.00 0.00 37.61 4.18
34 35 0.949105 AGGATGCACGGTTTGACGAC 60.949 55.000 0.00 0.00 37.61 4.34
35 36 0.669318 GAGGATGCACGGTTTGACGA 60.669 55.000 0.00 0.00 37.61 4.20
36 37 1.787847 GAGGATGCACGGTTTGACG 59.212 57.895 0.00 0.00 40.31 4.35
37 38 0.949105 ACGAGGATGCACGGTTTGAC 60.949 55.000 9.06 0.00 0.00 3.18
38 39 0.948623 CACGAGGATGCACGGTTTGA 60.949 55.000 9.06 0.00 0.00 2.69
39 40 1.497278 CACGAGGATGCACGGTTTG 59.503 57.895 9.06 0.00 0.00 2.93
40 41 1.671054 CCACGAGGATGCACGGTTT 60.671 57.895 9.06 0.00 36.89 3.27
41 42 2.047274 CCACGAGGATGCACGGTT 60.047 61.111 9.06 0.00 36.89 4.44
42 43 4.760047 GCCACGAGGATGCACGGT 62.760 66.667 9.06 0.00 36.89 4.83
43 44 4.457496 AGCCACGAGGATGCACGG 62.457 66.667 9.06 0.00 36.89 4.94
44 45 3.190849 CAGCCACGAGGATGCACG 61.191 66.667 3.70 1.95 45.53 5.34
49 50 1.047596 ATCAGCTCAGCCACGAGGAT 61.048 55.000 1.86 0.00 36.89 3.24
50 51 1.683707 ATCAGCTCAGCCACGAGGA 60.684 57.895 1.86 0.00 36.89 3.71
51 52 1.521010 CATCAGCTCAGCCACGAGG 60.521 63.158 0.00 0.00 33.36 4.63
52 53 2.172372 GCATCAGCTCAGCCACGAG 61.172 63.158 0.00 0.00 37.91 4.18
53 54 2.125391 GCATCAGCTCAGCCACGA 60.125 61.111 0.00 0.00 37.91 4.35
65 66 0.178995 TGTGGCCAGTCAAAGCATCA 60.179 50.000 5.11 0.00 0.00 3.07
93 94 2.180017 GGCTTTGCCTGCGTGATG 59.820 61.111 0.73 0.00 46.69 3.07
147 148 2.411476 ATATAGGGGGTCGGGGTGGG 62.411 65.000 0.00 0.00 0.00 4.61
148 149 0.908180 GATATAGGGGGTCGGGGTGG 60.908 65.000 0.00 0.00 0.00 4.61
149 150 0.178915 TGATATAGGGGGTCGGGGTG 60.179 60.000 0.00 0.00 0.00 4.61
150 151 0.116541 CTGATATAGGGGGTCGGGGT 59.883 60.000 0.00 0.00 0.00 4.95
151 152 0.412244 TCTGATATAGGGGGTCGGGG 59.588 60.000 0.00 0.00 0.00 5.73
152 153 1.358103 TCTCTGATATAGGGGGTCGGG 59.642 57.143 0.00 0.00 0.00 5.14
153 154 2.729194 CTCTCTGATATAGGGGGTCGG 58.271 57.143 0.00 0.00 0.00 4.79
154 155 2.096248 GCTCTCTGATATAGGGGGTCG 58.904 57.143 0.00 0.00 26.29 4.79
155 156 2.096248 CGCTCTCTGATATAGGGGGTC 58.904 57.143 0.00 0.00 26.29 4.46
156 157 1.711375 TCGCTCTCTGATATAGGGGGT 59.289 52.381 0.00 0.00 26.29 4.95
165 166 2.721231 GCTCGCTCGCTCTCTGAT 59.279 61.111 0.00 0.00 0.00 2.90
167 168 3.788586 CTCGCTCGCTCGCTCTCTG 62.789 68.421 0.00 0.00 0.00 3.35
210 216 1.079819 CGATCTGCAACAGTCGGGT 60.080 57.895 9.97 0.00 34.25 5.28
250 257 0.685097 GACCCAGTGTAGGTTCTGCA 59.315 55.000 0.00 0.00 37.88 4.41
350 358 2.340443 GAGGCGAGGCGGAATAGG 59.660 66.667 0.00 0.00 0.00 2.57
370 378 1.911471 GGCAGGAAGGAAGGAGGAG 59.089 63.158 0.00 0.00 0.00 3.69
371 379 1.990060 CGGCAGGAAGGAAGGAGGA 60.990 63.158 0.00 0.00 0.00 3.71
372 380 1.842381 AACGGCAGGAAGGAAGGAGG 61.842 60.000 0.00 0.00 0.00 4.30
373 381 0.674895 CAACGGCAGGAAGGAAGGAG 60.675 60.000 0.00 0.00 0.00 3.69
404 412 2.557317 GACGAGAGAGAGAAGGACGAT 58.443 52.381 0.00 0.00 0.00 3.73
412 420 1.519676 CGAGGCGACGAGAGAGAGA 60.520 63.158 0.00 0.00 35.09 3.10
431 439 0.473501 AGGAGAGGAGATGGGATGGC 60.474 60.000 0.00 0.00 0.00 4.40
550 608 4.821589 GAGACGGCGAAGGGGCAG 62.822 72.222 16.62 0.00 42.43 4.85
588 646 6.427150 CCGAAGCCATTACATTACATAACAC 58.573 40.000 0.00 0.00 0.00 3.32
589 647 5.008217 GCCGAAGCCATTACATTACATAACA 59.992 40.000 0.00 0.00 0.00 2.41
590 648 5.008217 TGCCGAAGCCATTACATTACATAAC 59.992 40.000 0.00 0.00 38.69 1.89
593 651 3.550820 TGCCGAAGCCATTACATTACAT 58.449 40.909 0.00 0.00 38.69 2.29
666 736 2.162008 GTCCTAGTAGATCCGATTCCGC 59.838 54.545 0.00 0.00 0.00 5.54
687 757 1.622811 GCCCATCACCATCTCTCCTAG 59.377 57.143 0.00 0.00 0.00 3.02
688 758 1.221523 AGCCCATCACCATCTCTCCTA 59.778 52.381 0.00 0.00 0.00 2.94
689 759 0.030297 AGCCCATCACCATCTCTCCT 60.030 55.000 0.00 0.00 0.00 3.69
699 769 1.200020 CAGGAACGAAAAGCCCATCAC 59.800 52.381 0.00 0.00 0.00 3.06
702 772 1.586154 CGCAGGAACGAAAAGCCCAT 61.586 55.000 0.00 0.00 34.06 4.00
740 817 7.431084 CACCGCGCAGTAATAATAAAGAAAAAT 59.569 33.333 8.75 0.00 0.00 1.82
757 834 1.019278 ACCTGAATTACACCGCGCAG 61.019 55.000 8.75 0.00 0.00 5.18
795 872 3.181443 ACAGCACTAACACTAGCCCTTTT 60.181 43.478 0.00 0.00 0.00 2.27
798 875 1.645710 ACAGCACTAACACTAGCCCT 58.354 50.000 0.00 0.00 0.00 5.19
801 878 5.164080 CGTTTCTTACAGCACTAACACTAGC 60.164 44.000 0.00 0.00 0.00 3.42
802 879 5.164080 GCGTTTCTTACAGCACTAACACTAG 60.164 44.000 0.00 0.00 0.00 2.57
803 880 4.682860 GCGTTTCTTACAGCACTAACACTA 59.317 41.667 0.00 0.00 0.00 2.74
804 881 3.493503 GCGTTTCTTACAGCACTAACACT 59.506 43.478 0.00 0.00 0.00 3.55
805 882 3.363673 GGCGTTTCTTACAGCACTAACAC 60.364 47.826 0.00 0.00 0.00 3.32
807 884 3.064931 AGGCGTTTCTTACAGCACTAAC 58.935 45.455 0.00 0.00 0.00 2.34
808 885 3.064207 CAGGCGTTTCTTACAGCACTAA 58.936 45.455 0.00 0.00 0.00 2.24
809 886 2.297880 TCAGGCGTTTCTTACAGCACTA 59.702 45.455 0.00 0.00 0.00 2.74
848 927 3.008517 TCGCAGGGATTGGGCAGA 61.009 61.111 0.00 0.00 39.45 4.26
849 928 2.515523 CTCGCAGGGATTGGGCAG 60.516 66.667 0.00 0.00 39.45 4.85
850 929 4.802051 GCTCGCAGGGATTGGGCA 62.802 66.667 0.00 0.00 39.45 5.36
851 930 4.802051 TGCTCGCAGGGATTGGGC 62.802 66.667 0.00 0.00 39.45 5.36
852 931 1.450531 GATTGCTCGCAGGGATTGGG 61.451 60.000 0.00 0.00 40.88 4.12
853 932 1.779025 CGATTGCTCGCAGGGATTGG 61.779 60.000 0.00 0.00 38.20 3.16
854 933 1.645455 CGATTGCTCGCAGGGATTG 59.355 57.895 0.00 0.00 38.20 2.67
879 958 1.830279 ACCATGCATCCTTCACACAG 58.170 50.000 0.00 0.00 0.00 3.66
880 959 2.291209 AACCATGCATCCTTCACACA 57.709 45.000 0.00 0.00 0.00 3.72
881 960 3.947196 TCATAACCATGCATCCTTCACAC 59.053 43.478 0.00 0.00 31.73 3.82
882 961 4.233632 TCATAACCATGCATCCTTCACA 57.766 40.909 0.00 0.00 31.73 3.58
884 963 7.724951 TCATAAATCATAACCATGCATCCTTCA 59.275 33.333 0.00 0.00 31.73 3.02
885 964 8.114331 TCATAAATCATAACCATGCATCCTTC 57.886 34.615 0.00 0.00 31.73 3.46
886 965 8.481492 TTCATAAATCATAACCATGCATCCTT 57.519 30.769 0.00 0.00 31.73 3.36
887 966 7.309621 GCTTCATAAATCATAACCATGCATCCT 60.310 37.037 0.00 0.00 31.73 3.24
888 967 6.810182 GCTTCATAAATCATAACCATGCATCC 59.190 38.462 0.00 0.00 31.73 3.51
889 968 6.810182 GGCTTCATAAATCATAACCATGCATC 59.190 38.462 0.00 0.00 31.73 3.91
890 969 6.495872 AGGCTTCATAAATCATAACCATGCAT 59.504 34.615 0.00 0.00 31.73 3.96
891 970 5.834742 AGGCTTCATAAATCATAACCATGCA 59.165 36.000 0.00 0.00 31.73 3.96
892 971 6.016024 TCAGGCTTCATAAATCATAACCATGC 60.016 38.462 0.00 0.00 31.73 4.06
893 972 7.230108 AGTCAGGCTTCATAAATCATAACCATG 59.770 37.037 0.00 0.00 0.00 3.66
917 996 1.369689 GTGACACGACGTACGCAGT 60.370 57.895 16.72 12.84 46.94 4.40
925 1004 0.659123 TGATCACACGTGACACGACG 60.659 55.000 33.12 23.91 46.05 5.12
933 1033 3.432933 TCAATCACACATGATCACACGTG 59.567 43.478 15.48 15.48 45.26 4.49
935 1035 3.681417 AGTCAATCACACATGATCACACG 59.319 43.478 0.00 0.00 45.26 4.49
949 1049 2.666022 CGTACGTGCAATCAGTCAATCA 59.334 45.455 7.22 0.00 0.00 2.57
950 1050 2.666508 ACGTACGTGCAATCAGTCAATC 59.333 45.455 22.14 0.00 0.00 2.67
951 1051 2.683968 ACGTACGTGCAATCAGTCAAT 58.316 42.857 22.14 0.00 0.00 2.57
952 1052 2.143008 ACGTACGTGCAATCAGTCAA 57.857 45.000 22.14 0.00 0.00 3.18
953 1053 1.790043 CAACGTACGTGCAATCAGTCA 59.210 47.619 23.57 0.00 0.00 3.41
954 1054 1.461888 GCAACGTACGTGCAATCAGTC 60.462 52.381 23.57 0.00 0.00 3.51
955 1055 0.511221 GCAACGTACGTGCAATCAGT 59.489 50.000 23.57 0.00 0.00 3.41
956 1056 0.510790 TGCAACGTACGTGCAATCAG 59.489 50.000 29.88 14.48 35.46 2.90
957 1057 0.510790 CTGCAACGTACGTGCAATCA 59.489 50.000 30.70 19.94 38.15 2.57
958 1058 0.789383 GCTGCAACGTACGTGCAATC 60.789 55.000 30.70 24.33 38.15 2.67
959 1059 1.206578 GCTGCAACGTACGTGCAAT 59.793 52.632 30.70 13.94 38.15 3.56
960 1060 1.827315 GAGCTGCAACGTACGTGCAA 61.827 55.000 30.70 20.67 38.15 4.08
961 1061 2.279851 AGCTGCAACGTACGTGCA 60.280 55.556 29.85 29.85 37.04 4.57
962 1062 2.022129 AGAGCTGCAACGTACGTGC 61.022 57.895 23.57 24.92 0.00 5.34
964 1064 0.243907 ATCAGAGCTGCAACGTACGT 59.756 50.000 16.72 16.72 0.00 3.57
965 1065 1.059692 CAATCAGAGCTGCAACGTACG 59.940 52.381 15.01 15.01 0.00 3.67
966 1066 1.394917 CCAATCAGAGCTGCAACGTAC 59.605 52.381 1.02 0.00 0.00 3.67
967 1067 1.675714 CCCAATCAGAGCTGCAACGTA 60.676 52.381 1.02 0.00 0.00 3.57
968 1068 0.957395 CCCAATCAGAGCTGCAACGT 60.957 55.000 1.02 0.00 0.00 3.99
969 1069 1.651240 CCCCAATCAGAGCTGCAACG 61.651 60.000 1.02 0.00 0.00 4.10
970 1070 0.322816 TCCCCAATCAGAGCTGCAAC 60.323 55.000 1.02 0.00 0.00 4.17
971 1071 0.405198 TTCCCCAATCAGAGCTGCAA 59.595 50.000 1.02 0.00 0.00 4.08
974 1371 1.558756 ACTCTTCCCCAATCAGAGCTG 59.441 52.381 0.00 0.00 38.10 4.24
1005 1406 2.746269 TCAACGGTAAACTCCTTGACG 58.254 47.619 0.00 0.00 0.00 4.35
1073 1482 4.746115 GCAACAATTGATGTGAAGAAGCAA 59.254 37.500 13.59 0.00 42.99 3.91
1144 1564 5.432885 AATGACGACAAACTTAAAGTGGG 57.567 39.130 0.00 0.00 0.00 4.61
1146 1566 7.305418 GCTCAAAATGACGACAAACTTAAAGTG 60.305 37.037 0.00 0.00 0.00 3.16
1154 1574 4.204978 CACAAGCTCAAAATGACGACAAAC 59.795 41.667 0.00 0.00 0.00 2.93
1161 1581 2.798976 TGCCACAAGCTCAAAATGAC 57.201 45.000 0.00 0.00 44.23 3.06
1178 1598 3.797039 TCAGAAGTGTATGGCTGTATGC 58.203 45.455 0.00 0.00 41.94 3.14
1179 1599 4.141846 ACCTCAGAAGTGTATGGCTGTATG 60.142 45.833 0.00 0.00 0.00 2.39
1180 1600 4.033709 ACCTCAGAAGTGTATGGCTGTAT 58.966 43.478 0.00 0.00 0.00 2.29
1182 1602 2.027745 CACCTCAGAAGTGTATGGCTGT 60.028 50.000 0.00 0.00 0.00 4.40
1183 1603 2.625737 CACCTCAGAAGTGTATGGCTG 58.374 52.381 0.00 0.00 0.00 4.85
1184 1604 1.065854 GCACCTCAGAAGTGTATGGCT 60.066 52.381 1.05 0.00 37.56 4.75
1185 1605 1.065854 AGCACCTCAGAAGTGTATGGC 60.066 52.381 1.05 0.00 37.56 4.40
1186 1606 2.234661 TCAGCACCTCAGAAGTGTATGG 59.765 50.000 1.05 0.00 37.56 2.74
1217 1789 5.117355 AGCATCACTTGAAATGTTGACAG 57.883 39.130 0.00 0.00 0.00 3.51
1249 1821 9.265901 GCATATTATTTCAGAAGAGTAGAGCAA 57.734 33.333 0.00 0.00 0.00 3.91
1256 1842 9.539825 CACTACAGCATATTATTTCAGAAGAGT 57.460 33.333 0.00 0.00 0.00 3.24
1304 1890 3.118371 AGCCTCCACCGGATAAGTTAAAG 60.118 47.826 9.46 0.00 0.00 1.85
1316 1902 0.760945 AGGGATAGAAGCCTCCACCG 60.761 60.000 0.00 0.00 32.90 4.94
1317 1903 1.972075 GTAGGGATAGAAGCCTCCACC 59.028 57.143 0.00 0.00 32.90 4.61
1318 1904 2.894765 GAGTAGGGATAGAAGCCTCCAC 59.105 54.545 0.00 0.00 32.90 4.02
1319 1905 2.792370 AGAGTAGGGATAGAAGCCTCCA 59.208 50.000 0.00 0.00 32.90 3.86
1320 1906 3.536075 AGAGTAGGGATAGAAGCCTCC 57.464 52.381 0.00 0.00 0.00 4.30
1321 1907 4.736473 AGAAGAGTAGGGATAGAAGCCTC 58.264 47.826 0.00 0.00 0.00 4.70
1322 1908 4.825199 AGAAGAGTAGGGATAGAAGCCT 57.175 45.455 0.00 0.00 0.00 4.58
1323 1909 5.144832 AGAAGAAGAGTAGGGATAGAAGCC 58.855 45.833 0.00 0.00 0.00 4.35
1324 1910 7.668052 TGATAGAAGAAGAGTAGGGATAGAAGC 59.332 40.741 0.00 0.00 0.00 3.86
1325 1911 9.581289 TTGATAGAAGAAGAGTAGGGATAGAAG 57.419 37.037 0.00 0.00 0.00 2.85
1346 1932 7.379529 CACGAGCGTGCATATCATATATTGATA 59.620 37.037 10.25 8.89 43.33 2.15
1347 1933 6.199719 CACGAGCGTGCATATCATATATTGAT 59.800 38.462 10.25 5.92 42.34 2.57
1348 1934 5.516339 CACGAGCGTGCATATCATATATTGA 59.484 40.000 10.25 0.00 39.39 2.57
1349 1935 5.721238 CACGAGCGTGCATATCATATATTG 58.279 41.667 10.25 0.00 39.39 1.90
1350 1936 5.956171 CACGAGCGTGCATATCATATATT 57.044 39.130 10.25 0.00 39.39 1.28
1364 1950 3.710326 TTCTAGAATATGCACGAGCGT 57.290 42.857 0.00 4.63 46.23 5.07
1365 1951 5.389642 TTTTTCTAGAATATGCACGAGCG 57.610 39.130 5.89 0.00 46.23 5.03
1390 1976 9.343539 AGAAGCAATTCTCAGTAAGTTAAAACT 57.656 29.630 0.00 0.00 42.04 2.66
1391 1977 9.387123 CAGAAGCAATTCTCAGTAAGTTAAAAC 57.613 33.333 0.00 0.00 0.00 2.43
1392 1978 8.076178 GCAGAAGCAATTCTCAGTAAGTTAAAA 58.924 33.333 0.00 0.00 41.58 1.52
1393 1979 7.308589 GGCAGAAGCAATTCTCAGTAAGTTAAA 60.309 37.037 0.00 0.00 44.61 1.52
1394 1980 6.149474 GGCAGAAGCAATTCTCAGTAAGTTAA 59.851 38.462 0.00 0.00 44.61 2.01
1395 1981 5.643777 GGCAGAAGCAATTCTCAGTAAGTTA 59.356 40.000 0.00 0.00 44.61 2.24
1396 1982 4.457257 GGCAGAAGCAATTCTCAGTAAGTT 59.543 41.667 0.00 0.00 44.61 2.66
1397 1983 4.006319 GGCAGAAGCAATTCTCAGTAAGT 58.994 43.478 0.00 0.00 44.61 2.24
1398 1984 4.094590 CAGGCAGAAGCAATTCTCAGTAAG 59.905 45.833 0.00 0.00 44.61 2.34
1399 1985 4.005650 CAGGCAGAAGCAATTCTCAGTAA 58.994 43.478 0.00 0.00 44.61 2.24
1400 1986 3.261643 TCAGGCAGAAGCAATTCTCAGTA 59.738 43.478 0.00 0.00 44.61 2.74
1401 1987 2.039480 TCAGGCAGAAGCAATTCTCAGT 59.961 45.455 0.00 0.00 44.61 3.41
1402 1988 2.419324 GTCAGGCAGAAGCAATTCTCAG 59.581 50.000 0.00 0.00 44.61 3.35
1403 1989 2.224597 TGTCAGGCAGAAGCAATTCTCA 60.225 45.455 0.00 0.00 44.61 3.27
1454 2044 3.569701 ACCTTGAGCCACAAAATACACAG 59.430 43.478 0.00 0.00 38.08 3.66
1456 2046 4.298332 CAACCTTGAGCCACAAAATACAC 58.702 43.478 0.00 0.00 38.08 2.90
1469 2065 0.250234 TCGAGATGGCCAACCTTGAG 59.750 55.000 10.96 6.41 36.63 3.02
1471 2067 0.745845 CCTCGAGATGGCCAACCTTG 60.746 60.000 15.71 14.33 36.63 3.61
1593 2189 6.041523 CCAAAATCCCCCAATGACGTTAATAT 59.958 38.462 0.00 0.00 0.00 1.28
1722 2320 1.403679 CCGAACAGACTTGGCAAACAA 59.596 47.619 0.00 0.00 37.55 2.83
1736 2334 1.373435 GGTGTGACCCATCCGAACA 59.627 57.895 0.00 0.00 30.04 3.18
1787 2385 2.923605 TCAACGTCCAAACAAACACC 57.076 45.000 0.00 0.00 0.00 4.16
1856 2454 7.878127 TGAAGGTTGATAAGTTCTTCTTACCAG 59.122 37.037 0.00 0.00 40.80 4.00
1995 2599 1.289109 CGCGGTGTTCGACCTGAAAT 61.289 55.000 0.00 0.00 43.55 2.17
2014 2618 3.445096 GGCATCCATGGATAAGGTAATGC 59.555 47.826 26.87 22.83 35.51 3.56
2059 2663 0.676736 GAGGGAATACGAGCCTGAGG 59.323 60.000 0.00 0.00 0.00 3.86
2133 2739 7.464977 GCAAATGTATGTTCAGCATTTCCATTC 60.465 37.037 11.91 0.00 39.79 2.67
2167 2774 5.336690 CCACTTTGGGTTATGTTTCATGGAG 60.337 44.000 0.00 0.00 32.67 3.86
2244 2862 0.898320 CAGGAGTCGTGGATGGACTT 59.102 55.000 4.87 0.00 44.41 3.01
2403 3023 2.231478 TGAGCAACAGCTACTGGTAGAC 59.769 50.000 11.44 3.69 39.10 2.59
2420 3040 3.817647 AGTCAAGTTTGTGAGGAATGAGC 59.182 43.478 0.00 0.00 0.00 4.26
2458 3078 0.770499 TGAAATGGTGGCTGAGGTGA 59.230 50.000 0.00 0.00 0.00 4.02
2536 3156 1.002366 CGATCTTGGACGAAGGCAAG 58.998 55.000 0.00 0.00 31.85 4.01
2537 3157 1.019278 GCGATCTTGGACGAAGGCAA 61.019 55.000 0.00 0.00 31.85 4.52
2587 3209 5.613358 ACTAAAATTCCTCGTGCAAAGAG 57.387 39.130 12.16 12.16 42.39 2.85
2596 3218 9.291664 CTACAAACTCTCTACTAAAATTCCTCG 57.708 37.037 0.00 0.00 0.00 4.63
2614 3237 3.522343 CCCCTAACCTAAGCCTACAAACT 59.478 47.826 0.00 0.00 0.00 2.66
2615 3238 3.882444 CCCCTAACCTAAGCCTACAAAC 58.118 50.000 0.00 0.00 0.00 2.93
2616 3239 2.240414 GCCCCTAACCTAAGCCTACAAA 59.760 50.000 0.00 0.00 0.00 2.83
2617 3240 1.841919 GCCCCTAACCTAAGCCTACAA 59.158 52.381 0.00 0.00 0.00 2.41
2636 3260 3.612860 CAGAAATGCAAGATGAGCTTTGC 59.387 43.478 12.87 12.87 33.60 3.68
2652 3276 1.255882 TGCGAACCCATTGCAGAAAT 58.744 45.000 0.00 0.00 34.03 2.17
2660 3284 1.949525 GTGCAGATATGCGAACCCATT 59.050 47.619 7.97 0.00 37.69 3.16
2673 3297 0.615331 ACATCTCCAACCGTGCAGAT 59.385 50.000 0.00 0.00 0.00 2.90
2715 3360 0.036732 ATGAAAAGTCGAGGCAGCCA 59.963 50.000 15.80 0.00 0.00 4.75
2718 3363 1.373570 GGGATGAAAAGTCGAGGCAG 58.626 55.000 0.00 0.00 0.00 4.85
2725 3370 3.633986 CCTATTGCTGGGGATGAAAAGTC 59.366 47.826 0.00 0.00 0.00 3.01
2741 3386 8.594881 ACTAGAACGAAATGAATAGCCTATTG 57.405 34.615 0.71 0.00 0.00 1.90
2748 3393 7.916128 ACATCGACTAGAACGAAATGAATAG 57.084 36.000 16.94 6.39 42.80 1.73
2754 3399 6.446781 TCCTAACATCGACTAGAACGAAAT 57.553 37.500 16.94 10.64 42.80 2.17
2761 3406 9.788889 TGACTATTTATCCTAACATCGACTAGA 57.211 33.333 0.00 0.00 0.00 2.43
2833 3481 3.537580 TGAACAGCCGACAACTAAAACT 58.462 40.909 0.00 0.00 0.00 2.66
2907 3555 8.450780 AGACTTATATTTAGGAACATAGGGGG 57.549 38.462 0.00 0.00 0.00 5.40
2930 3578 8.567948 GTTGTCCATTTGAAATGTCTAGAAAGA 58.432 33.333 15.93 1.84 0.00 2.52
2931 3579 8.352201 TGTTGTCCATTTGAAATGTCTAGAAAG 58.648 33.333 15.93 0.00 0.00 2.62
2932 3580 8.231692 TGTTGTCCATTTGAAATGTCTAGAAA 57.768 30.769 15.93 0.00 0.00 2.52
2933 3581 7.815840 TGTTGTCCATTTGAAATGTCTAGAA 57.184 32.000 15.93 4.41 0.00 2.10
2934 3582 7.815840 TTGTTGTCCATTTGAAATGTCTAGA 57.184 32.000 15.93 4.16 0.00 2.43
2938 3586 9.853555 TGTATATTGTTGTCCATTTGAAATGTC 57.146 29.630 15.93 9.53 0.00 3.06
2939 3587 9.859427 CTGTATATTGTTGTCCATTTGAAATGT 57.141 29.630 15.93 0.00 0.00 2.71
2943 3591 9.241919 ACATCTGTATATTGTTGTCCATTTGAA 57.758 29.630 0.00 0.00 0.00 2.69
2944 3592 8.806429 ACATCTGTATATTGTTGTCCATTTGA 57.194 30.769 0.00 0.00 0.00 2.69
2947 3595 9.851686 ACATACATCTGTATATTGTTGTCCATT 57.148 29.630 2.65 0.00 39.06 3.16
2949 3597 9.981114 CTACATACATCTGTATATTGTTGTCCA 57.019 33.333 2.65 0.00 39.06 4.02
2950 3598 9.424319 CCTACATACATCTGTATATTGTTGTCC 57.576 37.037 2.65 0.00 39.06 4.02
2951 3599 8.926710 GCCTACATACATCTGTATATTGTTGTC 58.073 37.037 2.65 0.00 39.06 3.18
2952 3600 8.428852 TGCCTACATACATCTGTATATTGTTGT 58.571 33.333 2.65 0.97 39.06 3.32
2953 3601 8.831715 TGCCTACATACATCTGTATATTGTTG 57.168 34.615 2.65 1.19 39.06 3.33
2962 3610 9.935241 CTCTAAAATATGCCTACATACATCTGT 57.065 33.333 0.00 0.00 41.50 3.41
2963 3611 9.935241 ACTCTAAAATATGCCTACATACATCTG 57.065 33.333 0.00 0.00 41.50 2.90
2964 3612 9.935241 CACTCTAAAATATGCCTACATACATCT 57.065 33.333 0.00 0.00 41.50 2.90
2965 3613 9.712305 ACACTCTAAAATATGCCTACATACATC 57.288 33.333 0.00 0.00 41.50 3.06
2968 3616 9.640963 CCTACACTCTAAAATATGCCTACATAC 57.359 37.037 0.00 0.00 41.50 2.39
2969 3617 9.375974 ACCTACACTCTAAAATATGCCTACATA 57.624 33.333 0.00 0.00 42.85 2.29
2970 3618 8.263854 ACCTACACTCTAAAATATGCCTACAT 57.736 34.615 0.00 0.00 40.49 2.29
2971 3619 7.670605 ACCTACACTCTAAAATATGCCTACA 57.329 36.000 0.00 0.00 0.00 2.74
2972 3620 8.202137 TGAACCTACACTCTAAAATATGCCTAC 58.798 37.037 0.00 0.00 0.00 3.18
2973 3621 8.202137 GTGAACCTACACTCTAAAATATGCCTA 58.798 37.037 0.00 0.00 37.73 3.93
2974 3622 7.048512 GTGAACCTACACTCTAAAATATGCCT 58.951 38.462 0.00 0.00 37.73 4.75
2975 3623 7.048512 AGTGAACCTACACTCTAAAATATGCC 58.951 38.462 0.00 0.00 46.36 4.40
2988 3636 4.083271 GGAGCAAAATGAGTGAACCTACAC 60.083 45.833 0.00 0.00 40.60 2.90
2989 3637 4.072131 GGAGCAAAATGAGTGAACCTACA 58.928 43.478 0.00 0.00 0.00 2.74
2990 3638 3.125316 CGGAGCAAAATGAGTGAACCTAC 59.875 47.826 0.00 0.00 0.00 3.18
2991 3639 3.244422 ACGGAGCAAAATGAGTGAACCTA 60.244 43.478 0.00 0.00 0.00 3.08
2992 3640 2.154462 CGGAGCAAAATGAGTGAACCT 58.846 47.619 0.00 0.00 0.00 3.50
2993 3641 1.880027 ACGGAGCAAAATGAGTGAACC 59.120 47.619 0.00 0.00 0.00 3.62
2994 3642 4.154195 ACATACGGAGCAAAATGAGTGAAC 59.846 41.667 0.00 0.00 0.00 3.18
2995 3643 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2996 3644 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2997 3645 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2998 3646 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2999 3647 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3000 3648 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3001 3649 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3002 3650 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3003 3651 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3004 3652 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3005 3653 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3006 3654 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3007 3655 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3008 3656 6.432607 TCTAACAAGTGACTACATACGGAG 57.567 41.667 0.00 0.00 0.00 4.63
3009 3657 6.822667 TTCTAACAAGTGACTACATACGGA 57.177 37.500 0.00 0.00 0.00 4.69
3010 3658 7.481642 AGATTCTAACAAGTGACTACATACGG 58.518 38.462 0.00 0.00 0.00 4.02
3011 3659 8.399425 AGAGATTCTAACAAGTGACTACATACG 58.601 37.037 0.00 0.00 0.00 3.06
3014 3662 9.688091 TCTAGAGATTCTAACAAGTGACTACAT 57.312 33.333 0.00 0.00 0.00 2.29
3015 3663 9.516546 TTCTAGAGATTCTAACAAGTGACTACA 57.483 33.333 0.00 0.00 0.00 2.74
3018 3666 9.303116 TCTTTCTAGAGATTCTAACAAGTGACT 57.697 33.333 0.00 0.00 0.00 3.41
3019 3667 9.349145 GTCTTTCTAGAGATTCTAACAAGTGAC 57.651 37.037 0.00 0.00 0.00 3.67
3020 3668 9.303116 AGTCTTTCTAGAGATTCTAACAAGTGA 57.697 33.333 0.00 0.00 0.00 3.41
3021 3669 9.921637 AAGTCTTTCTAGAGATTCTAACAAGTG 57.078 33.333 0.00 0.00 0.00 3.16
3038 3686 8.049721 CCTCTGTTCCCAAATATAAGTCTTTCT 58.950 37.037 0.00 0.00 0.00 2.52
3039 3687 7.283354 CCCTCTGTTCCCAAATATAAGTCTTTC 59.717 40.741 0.00 0.00 0.00 2.62
3040 3688 7.036863 TCCCTCTGTTCCCAAATATAAGTCTTT 60.037 37.037 0.00 0.00 0.00 2.52
3041 3689 6.447084 TCCCTCTGTTCCCAAATATAAGTCTT 59.553 38.462 0.00 0.00 0.00 3.01
3042 3690 5.970640 TCCCTCTGTTCCCAAATATAAGTCT 59.029 40.000 0.00 0.00 0.00 3.24
3043 3691 6.126739 ACTCCCTCTGTTCCCAAATATAAGTC 60.127 42.308 0.00 0.00 0.00 3.01
3044 3692 5.731678 ACTCCCTCTGTTCCCAAATATAAGT 59.268 40.000 0.00 0.00 0.00 2.24
3045 3693 6.253946 ACTCCCTCTGTTCCCAAATATAAG 57.746 41.667 0.00 0.00 0.00 1.73
3046 3694 7.570982 TGATACTCCCTCTGTTCCCAAATATAA 59.429 37.037 0.00 0.00 0.00 0.98
3047 3695 7.079700 TGATACTCCCTCTGTTCCCAAATATA 58.920 38.462 0.00 0.00 0.00 0.86
3048 3696 5.911178 TGATACTCCCTCTGTTCCCAAATAT 59.089 40.000 0.00 0.00 0.00 1.28
3049 3697 5.285401 TGATACTCCCTCTGTTCCCAAATA 58.715 41.667 0.00 0.00 0.00 1.40
3050 3698 4.111577 TGATACTCCCTCTGTTCCCAAAT 58.888 43.478 0.00 0.00 0.00 2.32
3051 3699 3.519510 CTGATACTCCCTCTGTTCCCAAA 59.480 47.826 0.00 0.00 0.00 3.28
3052 3700 3.107601 CTGATACTCCCTCTGTTCCCAA 58.892 50.000 0.00 0.00 0.00 4.12
3053 3701 2.752030 CTGATACTCCCTCTGTTCCCA 58.248 52.381 0.00 0.00 0.00 4.37
3054 3702 1.414550 GCTGATACTCCCTCTGTTCCC 59.585 57.143 0.00 0.00 0.00 3.97
3055 3703 2.111384 TGCTGATACTCCCTCTGTTCC 58.889 52.381 0.00 0.00 0.00 3.62
3056 3704 5.537300 TTATGCTGATACTCCCTCTGTTC 57.463 43.478 0.00 0.00 0.00 3.18
3057 3705 5.163258 CCTTTATGCTGATACTCCCTCTGTT 60.163 44.000 0.00 0.00 0.00 3.16
3058 3706 4.346418 CCTTTATGCTGATACTCCCTCTGT 59.654 45.833 0.00 0.00 0.00 3.41
3059 3707 4.262808 CCCTTTATGCTGATACTCCCTCTG 60.263 50.000 0.00 0.00 0.00 3.35
3060 3708 3.906846 CCCTTTATGCTGATACTCCCTCT 59.093 47.826 0.00 0.00 0.00 3.69
3061 3709 3.904339 TCCCTTTATGCTGATACTCCCTC 59.096 47.826 0.00 0.00 0.00 4.30
3062 3710 3.941629 TCCCTTTATGCTGATACTCCCT 58.058 45.455 0.00 0.00 0.00 4.20
3063 3711 4.917906 ATCCCTTTATGCTGATACTCCC 57.082 45.455 0.00 0.00 0.00 4.30
3064 3712 7.124901 TCAGATATCCCTTTATGCTGATACTCC 59.875 40.741 0.00 0.00 0.00 3.85
3065 3713 8.072321 TCAGATATCCCTTTATGCTGATACTC 57.928 38.462 0.00 0.00 0.00 2.59
3066 3714 8.441311 TTCAGATATCCCTTTATGCTGATACT 57.559 34.615 0.00 0.00 31.80 2.12
3067 3715 7.768120 CCTTCAGATATCCCTTTATGCTGATAC 59.232 40.741 0.00 0.00 31.80 2.24
3068 3716 7.679881 TCCTTCAGATATCCCTTTATGCTGATA 59.320 37.037 0.00 0.00 31.80 2.15
3069 3717 6.503217 TCCTTCAGATATCCCTTTATGCTGAT 59.497 38.462 0.00 0.00 31.80 2.90
3087 3735 5.721000 AGGCTATCCAGAGAATATCCTTCAG 59.279 44.000 0.00 0.00 33.74 3.02
3109 3761 4.023707 CACACTCTTCTAAAGGTGCAAAGG 60.024 45.833 0.00 0.00 34.85 3.11
3115 3767 6.761714 AGTTTGTACACACTCTTCTAAAGGTG 59.238 38.462 8.89 0.00 36.43 4.00
3193 3845 6.266786 ACATTAGTTCCACCGGAAAATTTTCT 59.733 34.615 25.86 7.93 43.86 2.52
3195 3847 6.413783 ACATTAGTTCCACCGGAAAATTTT 57.586 33.333 9.46 2.28 43.86 1.82
3198 3850 6.349860 GCTTAACATTAGTTCCACCGGAAAAT 60.350 38.462 9.46 0.85 43.86 1.82
3205 3857 4.947388 TCATGGCTTAACATTAGTTCCACC 59.053 41.667 0.00 0.00 39.15 4.61
3212 3864 5.220662 CCACGTTCTCATGGCTTAACATTAG 60.221 44.000 0.00 0.00 0.00 1.73
3258 3910 1.592669 CCATGTGCGATCTCCGACC 60.593 63.158 0.00 0.00 41.76 4.79
3263 3915 2.681706 CTATGACCCATGTGCGATCTC 58.318 52.381 0.00 0.00 0.00 2.75
3284 3936 3.495100 GGGTGTATCTCTGCCAGGTATTG 60.495 52.174 0.00 0.00 0.00 1.90
3301 3953 2.700897 GAGTGCCTGAGTATATGGGTGT 59.299 50.000 0.00 0.00 0.00 4.16
3346 3998 6.373186 TGTAGATCTGTACTATGAACCACG 57.627 41.667 5.18 0.00 0.00 4.94
3356 4008 3.449018 CCAACTGGCTGTAGATCTGTACT 59.551 47.826 5.18 0.00 0.00 2.73
3397 4061 4.654262 TGGAGGGTATCTGAACCAATAGTC 59.346 45.833 9.97 0.00 41.67 2.59
3418 4083 5.143376 AGCACCTTTTGATTCTGAAATGG 57.857 39.130 0.00 0.00 35.00 3.16
3453 4118 9.841295 TCCACTAGTTACTGTCAAAACTTAATT 57.159 29.630 0.00 0.00 37.19 1.40
3463 4128 7.363880 GGAGATCAAATCCACTAGTTACTGTCA 60.364 40.741 0.00 0.00 36.79 3.58
3469 4134 6.785337 TTCGGAGATCAAATCCACTAGTTA 57.215 37.500 0.00 0.00 36.57 2.24
3489 4154 3.691049 TTGAACAGGCTGTTTCTTTCG 57.309 42.857 31.60 0.00 41.28 3.46
3494 4159 5.854431 TTTTGTTTTGAACAGGCTGTTTC 57.146 34.783 31.60 23.44 41.28 2.78
3496 4161 5.244755 ACATTTTGTTTTGAACAGGCTGTT 58.755 33.333 31.59 31.59 44.37 3.16
3502 4167 7.166473 GCTCAGTCTACATTTTGTTTTGAACAG 59.834 37.037 0.00 0.00 43.27 3.16
3505 4170 7.333528 AGCTCAGTCTACATTTTGTTTTGAA 57.666 32.000 0.00 0.00 0.00 2.69
3524 4189 5.234752 TGTTTCTAGTCGCAATTTAGCTCA 58.765 37.500 0.00 0.00 0.00 4.26
3551 4216 2.477375 GTCTGGCAATGCATTGTTGTTG 59.523 45.455 33.67 21.23 39.88 3.33


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.