Multiple sequence alignment - TraesCS5D01G348900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G348900 chr5D 100.000 2760 0 0 1 2760 434365192 434362433 0.000000e+00 5097.0
1 TraesCS5D01G348900 chr5D 93.314 688 31 11 1644 2323 434348378 434349058 0.000000e+00 1002.0
2 TraesCS5D01G348900 chr5D 91.901 568 28 3 1067 1634 434347700 434348249 0.000000e+00 778.0
3 TraesCS5D01G348900 chr5D 96.176 340 8 2 1 335 434375325 434374986 4.020000e-153 551.0
4 TraesCS5D01G348900 chr5D 96.396 333 12 0 1 333 89542824 89542492 1.440000e-152 549.0
5 TraesCS5D01G348900 chr5D 91.209 273 23 1 2351 2622 434349149 434349421 1.210000e-98 370.0
6 TraesCS5D01G348900 chr5D 84.821 112 17 0 2649 2760 483108850 483108739 2.250000e-21 113.0
7 TraesCS5D01G348900 chr5D 83.495 103 16 1 434 535 434335960 434336062 8.140000e-16 95.3
8 TraesCS5D01G348900 chr5B 91.169 2310 124 39 333 2623 527035302 527033054 0.000000e+00 3062.0
9 TraesCS5D01G348900 chr5A 89.895 1336 73 22 332 1646 548221854 548220560 0.000000e+00 1663.0
10 TraesCS5D01G348900 chr5A 92.558 215 10 4 1647 1859 548220478 548220268 1.240000e-78 303.0
11 TraesCS5D01G348900 chr2A 90.278 792 63 10 1838 2622 776392274 776393058 0.000000e+00 1024.0
12 TraesCS5D01G348900 chr1D 96.407 334 12 0 1 334 338959959 338959626 4.020000e-153 551.0
13 TraesCS5D01G348900 chr1D 96.142 337 11 2 1 335 277367347 277367683 1.440000e-152 549.0
14 TraesCS5D01G348900 chr7D 95.362 345 14 1 1 345 181578586 181578244 5.200000e-152 547.0
15 TraesCS5D01G348900 chr7D 95.588 340 15 0 1 340 429968354 429968015 1.870000e-151 545.0
16 TraesCS5D01G348900 chr4D 96.131 336 12 1 1 335 241320914 241320579 5.200000e-152 547.0
17 TraesCS5D01G348900 chr4D 96.131 336 12 1 1 335 362764284 362764619 5.200000e-152 547.0
18 TraesCS5D01G348900 chr4D 96.131 336 12 1 1 335 460933514 460933179 5.200000e-152 547.0
19 TraesCS5D01G348900 chr6D 89.655 116 10 2 2645 2760 243451522 243451409 2.210000e-31 147.0
20 TraesCS5D01G348900 chr6A 90.826 109 10 0 2652 2760 333957960 333958068 2.210000e-31 147.0
21 TraesCS5D01G348900 chr6A 93.023 43 3 0 2553 2595 515298821 515298779 2.290000e-06 63.9
22 TraesCS5D01G348900 chr6B 88.793 116 12 1 2645 2760 334454287 334454173 1.030000e-29 141.0
23 TraesCS5D01G348900 chr3D 87.500 112 14 0 2649 2760 575968102 575967991 2.230000e-26 130.0
24 TraesCS5D01G348900 chrUn 85.455 110 15 1 2644 2753 74618885 74618777 2.250000e-21 113.0
25 TraesCS5D01G348900 chr1B 85.000 100 14 1 2645 2744 319133901 319133803 1.750000e-17 100.0
26 TraesCS5D01G348900 chr2B 82.143 112 16 3 2649 2759 646994672 646994780 2.930000e-15 93.5
27 TraesCS5D01G348900 chr2B 100.000 29 0 0 2062 2090 627061585 627061557 1.000000e-03 54.7
28 TraesCS5D01G348900 chr3A 80.870 115 19 3 2649 2760 61230966 61231080 1.360000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G348900 chr5D 434362433 434365192 2759 True 5097.000000 5097 100.000000 1 2760 1 chr5D.!!$R2 2759
1 TraesCS5D01G348900 chr5D 434347700 434349421 1721 False 716.666667 1002 92.141333 1067 2622 3 chr5D.!!$F2 1555
2 TraesCS5D01G348900 chr5B 527033054 527035302 2248 True 3062.000000 3062 91.169000 333 2623 1 chr5B.!!$R1 2290
3 TraesCS5D01G348900 chr5A 548220268 548221854 1586 True 983.000000 1663 91.226500 332 1859 2 chr5A.!!$R1 1527
4 TraesCS5D01G348900 chr2A 776392274 776393058 784 False 1024.000000 1024 90.278000 1838 2622 1 chr2A.!!$F1 784

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
49 50 0.032678 CGATCCAATGCCTACGAGCT 59.967 55.0 0.00 0.0 0.00 4.09 F
266 267 0.036388 GCTCCCCTTGTGTCGAATCA 60.036 55.0 0.00 0.0 0.00 2.57 F
601 611 1.102809 TATGGAGCCCATTTGCAGCG 61.103 55.0 11.36 0.0 42.23 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1069 1097 1.734465 GGACATTGTGTGCTACTGCTC 59.266 52.381 0.0 0.0 35.71 4.26 R
1695 1954 3.084786 ACAGATTAGCTTTGCCTCCAAC 58.915 45.455 0.0 0.0 0.00 3.77 R
2548 2887 1.065564 GCATCTTTGAGAGACTGGGCT 60.066 52.381 0.0 0.0 37.17 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.097742 TGAACCACATCCGTCATAATTCT 57.902 39.130 0.00 0.00 0.00 2.40
23 24 5.116180 TGAACCACATCCGTCATAATTCTC 58.884 41.667 0.00 0.00 0.00 2.87
24 25 4.073293 ACCACATCCGTCATAATTCTCC 57.927 45.455 0.00 0.00 0.00 3.71
25 26 3.454447 ACCACATCCGTCATAATTCTCCA 59.546 43.478 0.00 0.00 0.00 3.86
26 27 4.103153 ACCACATCCGTCATAATTCTCCAT 59.897 41.667 0.00 0.00 0.00 3.41
27 28 4.692625 CCACATCCGTCATAATTCTCCATC 59.307 45.833 0.00 0.00 0.00 3.51
28 29 5.299949 CACATCCGTCATAATTCTCCATCA 58.700 41.667 0.00 0.00 0.00 3.07
29 30 5.178252 CACATCCGTCATAATTCTCCATCAC 59.822 44.000 0.00 0.00 0.00 3.06
30 31 4.336889 TCCGTCATAATTCTCCATCACC 57.663 45.455 0.00 0.00 0.00 4.02
31 32 3.059884 CCGTCATAATTCTCCATCACCG 58.940 50.000 0.00 0.00 0.00 4.94
32 33 3.243737 CCGTCATAATTCTCCATCACCGA 60.244 47.826 0.00 0.00 0.00 4.69
33 34 4.560128 CGTCATAATTCTCCATCACCGAT 58.440 43.478 0.00 0.00 0.00 4.18
34 35 4.623167 CGTCATAATTCTCCATCACCGATC 59.377 45.833 0.00 0.00 0.00 3.69
35 36 4.932200 GTCATAATTCTCCATCACCGATCC 59.068 45.833 0.00 0.00 0.00 3.36
36 37 4.592778 TCATAATTCTCCATCACCGATCCA 59.407 41.667 0.00 0.00 0.00 3.41
37 38 3.931907 AATTCTCCATCACCGATCCAA 57.068 42.857 0.00 0.00 0.00 3.53
38 39 4.443978 AATTCTCCATCACCGATCCAAT 57.556 40.909 0.00 0.00 0.00 3.16
39 40 2.916702 TCTCCATCACCGATCCAATG 57.083 50.000 0.00 0.00 0.00 2.82
40 41 1.202687 TCTCCATCACCGATCCAATGC 60.203 52.381 0.00 0.00 0.00 3.56
41 42 0.179020 TCCATCACCGATCCAATGCC 60.179 55.000 0.00 0.00 0.00 4.40
42 43 0.179009 CCATCACCGATCCAATGCCT 60.179 55.000 0.00 0.00 0.00 4.75
43 44 1.072173 CCATCACCGATCCAATGCCTA 59.928 52.381 0.00 0.00 0.00 3.93
44 45 2.146342 CATCACCGATCCAATGCCTAC 58.854 52.381 0.00 0.00 0.00 3.18
45 46 0.104120 TCACCGATCCAATGCCTACG 59.896 55.000 0.00 0.00 0.00 3.51
46 47 0.104120 CACCGATCCAATGCCTACGA 59.896 55.000 0.00 0.00 0.00 3.43
47 48 0.389391 ACCGATCCAATGCCTACGAG 59.611 55.000 0.00 0.00 0.00 4.18
48 49 0.946221 CCGATCCAATGCCTACGAGC 60.946 60.000 0.00 0.00 0.00 5.03
49 50 0.032678 CGATCCAATGCCTACGAGCT 59.967 55.000 0.00 0.00 0.00 4.09
50 51 1.539065 CGATCCAATGCCTACGAGCTT 60.539 52.381 0.00 0.00 0.00 3.74
51 52 2.565841 GATCCAATGCCTACGAGCTTT 58.434 47.619 0.00 0.00 0.00 3.51
52 53 2.489938 TCCAATGCCTACGAGCTTTT 57.510 45.000 0.00 0.00 0.00 2.27
53 54 2.356135 TCCAATGCCTACGAGCTTTTC 58.644 47.619 0.00 0.00 0.00 2.29
54 55 2.083774 CCAATGCCTACGAGCTTTTCA 58.916 47.619 0.00 0.00 0.00 2.69
55 56 2.159517 CCAATGCCTACGAGCTTTTCAC 60.160 50.000 0.00 0.00 0.00 3.18
56 57 2.472695 ATGCCTACGAGCTTTTCACA 57.527 45.000 0.00 0.00 0.00 3.58
57 58 2.472695 TGCCTACGAGCTTTTCACAT 57.527 45.000 0.00 0.00 0.00 3.21
58 59 3.603158 TGCCTACGAGCTTTTCACATA 57.397 42.857 0.00 0.00 0.00 2.29
59 60 4.137116 TGCCTACGAGCTTTTCACATAT 57.863 40.909 0.00 0.00 0.00 1.78
60 61 4.513442 TGCCTACGAGCTTTTCACATATT 58.487 39.130 0.00 0.00 0.00 1.28
61 62 4.332543 TGCCTACGAGCTTTTCACATATTG 59.667 41.667 0.00 0.00 0.00 1.90
62 63 4.332819 GCCTACGAGCTTTTCACATATTGT 59.667 41.667 0.00 0.00 0.00 2.71
63 64 5.163754 GCCTACGAGCTTTTCACATATTGTT 60.164 40.000 0.00 0.00 0.00 2.83
64 65 6.478588 CCTACGAGCTTTTCACATATTGTTC 58.521 40.000 0.00 0.00 0.00 3.18
65 66 5.296813 ACGAGCTTTTCACATATTGTTCC 57.703 39.130 0.00 0.00 0.00 3.62
66 67 5.003804 ACGAGCTTTTCACATATTGTTCCT 58.996 37.500 0.00 0.00 0.00 3.36
67 68 5.122396 ACGAGCTTTTCACATATTGTTCCTC 59.878 40.000 0.00 0.00 0.00 3.71
68 69 5.551760 AGCTTTTCACATATTGTTCCTCG 57.448 39.130 0.00 0.00 0.00 4.63
69 70 4.098416 GCTTTTCACATATTGTTCCTCGC 58.902 43.478 0.00 0.00 0.00 5.03
70 71 4.142600 GCTTTTCACATATTGTTCCTCGCT 60.143 41.667 0.00 0.00 0.00 4.93
71 72 5.619981 GCTTTTCACATATTGTTCCTCGCTT 60.620 40.000 0.00 0.00 0.00 4.68
72 73 6.403200 GCTTTTCACATATTGTTCCTCGCTTA 60.403 38.462 0.00 0.00 0.00 3.09
73 74 7.624360 TTTTCACATATTGTTCCTCGCTTAT 57.376 32.000 0.00 0.00 0.00 1.73
74 75 7.624360 TTTCACATATTGTTCCTCGCTTATT 57.376 32.000 0.00 0.00 0.00 1.40
75 76 7.624360 TTCACATATTGTTCCTCGCTTATTT 57.376 32.000 0.00 0.00 0.00 1.40
76 77 8.725405 TTCACATATTGTTCCTCGCTTATTTA 57.275 30.769 0.00 0.00 0.00 1.40
77 78 8.138365 TCACATATTGTTCCTCGCTTATTTAC 57.862 34.615 0.00 0.00 0.00 2.01
78 79 7.985184 TCACATATTGTTCCTCGCTTATTTACT 59.015 33.333 0.00 0.00 0.00 2.24
79 80 8.612619 CACATATTGTTCCTCGCTTATTTACTT 58.387 33.333 0.00 0.00 0.00 2.24
80 81 9.174166 ACATATTGTTCCTCGCTTATTTACTTT 57.826 29.630 0.00 0.00 0.00 2.66
83 84 8.965986 ATTGTTCCTCGCTTATTTACTTTTTC 57.034 30.769 0.00 0.00 0.00 2.29
84 85 6.595794 TGTTCCTCGCTTATTTACTTTTTCG 58.404 36.000 0.00 0.00 0.00 3.46
85 86 6.203338 TGTTCCTCGCTTATTTACTTTTTCGT 59.797 34.615 0.00 0.00 0.00 3.85
86 87 6.790285 TCCTCGCTTATTTACTTTTTCGTT 57.210 33.333 0.00 0.00 0.00 3.85
87 88 6.595794 TCCTCGCTTATTTACTTTTTCGTTG 58.404 36.000 0.00 0.00 0.00 4.10
88 89 5.283012 CCTCGCTTATTTACTTTTTCGTTGC 59.717 40.000 0.00 0.00 0.00 4.17
89 90 5.992729 TCGCTTATTTACTTTTTCGTTGCT 58.007 33.333 0.00 0.00 0.00 3.91
90 91 7.119605 TCGCTTATTTACTTTTTCGTTGCTA 57.880 32.000 0.00 0.00 0.00 3.49
91 92 7.745015 TCGCTTATTTACTTTTTCGTTGCTAT 58.255 30.769 0.00 0.00 0.00 2.97
92 93 8.231837 TCGCTTATTTACTTTTTCGTTGCTATT 58.768 29.630 0.00 0.00 0.00 1.73
93 94 8.304138 CGCTTATTTACTTTTTCGTTGCTATTG 58.696 33.333 0.00 0.00 0.00 1.90
94 95 9.124807 GCTTATTTACTTTTTCGTTGCTATTGT 57.875 29.630 0.00 0.00 0.00 2.71
98 99 9.953697 ATTTACTTTTTCGTTGCTATTGTTACA 57.046 25.926 0.00 0.00 0.00 2.41
99 100 9.784680 TTTACTTTTTCGTTGCTATTGTTACAA 57.215 25.926 0.00 0.00 0.00 2.41
100 101 9.953697 TTACTTTTTCGTTGCTATTGTTACAAT 57.046 25.926 15.22 15.22 0.00 2.71
101 102 8.502161 ACTTTTTCGTTGCTATTGTTACAATC 57.498 30.769 14.29 1.95 0.00 2.67
102 103 8.132362 ACTTTTTCGTTGCTATTGTTACAATCA 58.868 29.630 14.29 4.68 0.00 2.57
103 104 7.845617 TTTTCGTTGCTATTGTTACAATCAC 57.154 32.000 14.29 8.38 0.00 3.06
104 105 6.795098 TTCGTTGCTATTGTTACAATCACT 57.205 33.333 14.29 0.00 0.00 3.41
105 106 7.892778 TTCGTTGCTATTGTTACAATCACTA 57.107 32.000 14.29 2.52 0.00 2.74
106 107 7.285783 TCGTTGCTATTGTTACAATCACTAC 57.714 36.000 14.29 12.61 0.00 2.73
107 108 6.869388 TCGTTGCTATTGTTACAATCACTACA 59.131 34.615 14.29 4.43 0.00 2.74
108 109 7.385478 TCGTTGCTATTGTTACAATCACTACAA 59.615 33.333 14.29 9.68 35.25 2.41
109 110 8.012809 CGTTGCTATTGTTACAATCACTACAAA 58.987 33.333 14.29 0.00 34.54 2.83
110 111 9.672086 GTTGCTATTGTTACAATCACTACAAAA 57.328 29.630 14.29 0.00 34.54 2.44
111 112 9.672086 TTGCTATTGTTACAATCACTACAAAAC 57.328 29.630 14.29 0.00 34.54 2.43
112 113 8.293867 TGCTATTGTTACAATCACTACAAAACC 58.706 33.333 14.29 0.00 34.54 3.27
113 114 7.753580 GCTATTGTTACAATCACTACAAAACCC 59.246 37.037 14.29 0.00 34.54 4.11
114 115 7.589958 ATTGTTACAATCACTACAAAACCCA 57.410 32.000 4.56 0.00 34.54 4.51
115 116 7.406031 TTGTTACAATCACTACAAAACCCAA 57.594 32.000 0.00 0.00 0.00 4.12
116 117 7.406031 TGTTACAATCACTACAAAACCCAAA 57.594 32.000 0.00 0.00 0.00 3.28
117 118 7.837863 TGTTACAATCACTACAAAACCCAAAA 58.162 30.769 0.00 0.00 0.00 2.44
118 119 8.311836 TGTTACAATCACTACAAAACCCAAAAA 58.688 29.630 0.00 0.00 0.00 1.94
119 120 9.320352 GTTACAATCACTACAAAACCCAAAAAT 57.680 29.630 0.00 0.00 0.00 1.82
131 132 9.402320 ACAAAACCCAAAAATATTACTTTTGCT 57.598 25.926 5.11 0.00 40.75 3.91
132 133 9.662545 CAAAACCCAAAAATATTACTTTTGCTG 57.337 29.630 5.11 2.18 40.75 4.41
133 134 8.972458 AAACCCAAAAATATTACTTTTGCTGT 57.028 26.923 5.11 2.68 40.75 4.40
134 135 8.972458 AACCCAAAAATATTACTTTTGCTGTT 57.028 26.923 5.11 7.40 40.75 3.16
135 136 8.376889 ACCCAAAAATATTACTTTTGCTGTTG 57.623 30.769 5.11 0.00 40.75 3.33
136 137 7.990314 ACCCAAAAATATTACTTTTGCTGTTGT 59.010 29.630 5.11 0.00 40.75 3.32
137 138 8.835439 CCCAAAAATATTACTTTTGCTGTTGTT 58.165 29.630 5.11 0.00 40.75 2.83
141 142 8.736751 AAATATTACTTTTGCTGTTGTTACCG 57.263 30.769 0.00 0.00 0.00 4.02
142 143 5.761165 ATTACTTTTGCTGTTGTTACCGT 57.239 34.783 0.00 0.00 0.00 4.83
143 144 5.564048 TTACTTTTGCTGTTGTTACCGTT 57.436 34.783 0.00 0.00 0.00 4.44
144 145 6.674694 TTACTTTTGCTGTTGTTACCGTTA 57.325 33.333 0.00 0.00 0.00 3.18
145 146 4.912214 ACTTTTGCTGTTGTTACCGTTAC 58.088 39.130 0.00 0.00 0.00 2.50
146 147 4.637091 ACTTTTGCTGTTGTTACCGTTACT 59.363 37.500 0.00 0.00 0.00 2.24
147 148 5.124297 ACTTTTGCTGTTGTTACCGTTACTT 59.876 36.000 0.00 0.00 0.00 2.24
148 149 4.799419 TTGCTGTTGTTACCGTTACTTC 57.201 40.909 0.00 0.00 0.00 3.01
149 150 3.132925 TGCTGTTGTTACCGTTACTTCC 58.867 45.455 0.00 0.00 0.00 3.46
150 151 3.132925 GCTGTTGTTACCGTTACTTCCA 58.867 45.455 0.00 0.00 0.00 3.53
151 152 3.749609 GCTGTTGTTACCGTTACTTCCAT 59.250 43.478 0.00 0.00 0.00 3.41
152 153 4.931002 GCTGTTGTTACCGTTACTTCCATA 59.069 41.667 0.00 0.00 0.00 2.74
153 154 5.163923 GCTGTTGTTACCGTTACTTCCATAC 60.164 44.000 0.00 0.00 0.00 2.39
154 155 6.100404 TGTTGTTACCGTTACTTCCATACT 57.900 37.500 0.00 0.00 0.00 2.12
155 156 7.225784 TGTTGTTACCGTTACTTCCATACTA 57.774 36.000 0.00 0.00 0.00 1.82
156 157 7.090173 TGTTGTTACCGTTACTTCCATACTAC 58.910 38.462 0.00 0.00 0.00 2.73
157 158 7.039784 TGTTGTTACCGTTACTTCCATACTACT 60.040 37.037 0.00 0.00 0.00 2.57
158 159 7.466746 TGTTACCGTTACTTCCATACTACTT 57.533 36.000 0.00 0.00 0.00 2.24
159 160 7.895759 TGTTACCGTTACTTCCATACTACTTT 58.104 34.615 0.00 0.00 0.00 2.66
160 161 7.814107 TGTTACCGTTACTTCCATACTACTTTG 59.186 37.037 0.00 0.00 0.00 2.77
161 162 5.173664 ACCGTTACTTCCATACTACTTTGC 58.826 41.667 0.00 0.00 0.00 3.68
162 163 5.046807 ACCGTTACTTCCATACTACTTTGCT 60.047 40.000 0.00 0.00 0.00 3.91
163 164 6.153340 ACCGTTACTTCCATACTACTTTGCTA 59.847 38.462 0.00 0.00 0.00 3.49
164 165 6.474751 CCGTTACTTCCATACTACTTTGCTAC 59.525 42.308 0.00 0.00 0.00 3.58
165 166 7.256286 CGTTACTTCCATACTACTTTGCTACT 58.744 38.462 0.00 0.00 0.00 2.57
166 167 8.400947 CGTTACTTCCATACTACTTTGCTACTA 58.599 37.037 0.00 0.00 0.00 1.82
179 180 9.226345 CTACTTTGCTACTAAATAATTTGCTGC 57.774 33.333 0.00 0.00 0.00 5.25
180 181 7.601856 ACTTTGCTACTAAATAATTTGCTGCA 58.398 30.769 0.00 0.00 0.00 4.41
181 182 7.756722 ACTTTGCTACTAAATAATTTGCTGCAG 59.243 33.333 10.11 10.11 30.11 4.41
182 183 7.389803 TTGCTACTAAATAATTTGCTGCAGA 57.610 32.000 20.43 0.00 30.11 4.26
183 184 7.572523 TGCTACTAAATAATTTGCTGCAGAT 57.427 32.000 20.43 0.05 0.00 2.90
184 185 8.675705 TGCTACTAAATAATTTGCTGCAGATA 57.324 30.769 20.43 1.74 0.00 1.98
185 186 9.288576 TGCTACTAAATAATTTGCTGCAGATAT 57.711 29.630 20.43 3.71 0.00 1.63
196 197 8.696043 ATTTGCTGCAGATATTAAGTTATCCA 57.304 30.769 20.43 0.00 30.29 3.41
197 198 7.734924 TTGCTGCAGATATTAAGTTATCCAG 57.265 36.000 20.43 0.00 30.29 3.86
198 199 6.233434 TGCTGCAGATATTAAGTTATCCAGG 58.767 40.000 20.43 0.00 30.29 4.45
199 200 6.183361 TGCTGCAGATATTAAGTTATCCAGGT 60.183 38.462 20.43 0.00 30.29 4.00
200 201 6.148480 GCTGCAGATATTAAGTTATCCAGGTG 59.852 42.308 20.43 0.00 30.29 4.00
201 202 7.136822 TGCAGATATTAAGTTATCCAGGTGT 57.863 36.000 0.00 0.00 30.29 4.16
202 203 6.992123 TGCAGATATTAAGTTATCCAGGTGTG 59.008 38.462 0.00 0.00 30.29 3.82
203 204 6.428159 GCAGATATTAAGTTATCCAGGTGTGG 59.572 42.308 0.00 0.00 46.63 4.17
204 205 7.509546 CAGATATTAAGTTATCCAGGTGTGGT 58.490 38.462 0.00 0.00 45.28 4.16
205 206 7.993183 CAGATATTAAGTTATCCAGGTGTGGTT 59.007 37.037 0.00 0.00 45.28 3.67
206 207 7.993183 AGATATTAAGTTATCCAGGTGTGGTTG 59.007 37.037 0.00 0.00 45.28 3.77
207 208 5.570205 TTAAGTTATCCAGGTGTGGTTGA 57.430 39.130 0.00 0.00 45.28 3.18
208 209 4.447138 AAGTTATCCAGGTGTGGTTGAA 57.553 40.909 0.00 0.00 45.28 2.69
209 210 4.657814 AGTTATCCAGGTGTGGTTGAAT 57.342 40.909 0.00 0.00 45.28 2.57
210 211 4.998051 AGTTATCCAGGTGTGGTTGAATT 58.002 39.130 0.00 0.00 45.28 2.17
211 212 4.766891 AGTTATCCAGGTGTGGTTGAATTG 59.233 41.667 0.00 0.00 45.28 2.32
212 213 3.524095 ATCCAGGTGTGGTTGAATTGA 57.476 42.857 0.00 0.00 45.28 2.57
213 214 2.582052 TCCAGGTGTGGTTGAATTGAC 58.418 47.619 0.00 0.00 45.28 3.18
214 215 2.092158 TCCAGGTGTGGTTGAATTGACA 60.092 45.455 0.00 0.00 45.28 3.58
215 216 2.692557 CCAGGTGTGGTTGAATTGACAA 59.307 45.455 0.00 0.00 39.30 3.18
216 217 3.490761 CCAGGTGTGGTTGAATTGACAAC 60.491 47.826 0.00 0.00 46.20 3.32
217 218 3.381272 CAGGTGTGGTTGAATTGACAACT 59.619 43.478 9.21 0.00 46.17 3.16
218 219 3.632145 AGGTGTGGTTGAATTGACAACTC 59.368 43.478 9.21 0.00 46.17 3.01
219 220 3.380004 GGTGTGGTTGAATTGACAACTCA 59.620 43.478 9.21 0.00 46.17 3.41
220 221 4.142271 GGTGTGGTTGAATTGACAACTCAA 60.142 41.667 7.94 7.94 46.17 3.02
221 222 4.798387 GTGTGGTTGAATTGACAACTCAAC 59.202 41.667 26.56 26.56 46.17 3.18
222 223 4.704540 TGTGGTTGAATTGACAACTCAACT 59.295 37.500 30.54 0.00 45.33 3.16
223 224 5.036737 GTGGTTGAATTGACAACTCAACTG 58.963 41.667 30.54 0.00 45.33 3.16
224 225 4.044426 GGTTGAATTGACAACTCAACTGC 58.956 43.478 30.54 17.88 45.33 4.40
225 226 4.202050 GGTTGAATTGACAACTCAACTGCT 60.202 41.667 30.54 0.00 45.33 4.24
226 227 5.008613 GGTTGAATTGACAACTCAACTGCTA 59.991 40.000 30.54 2.98 45.33 3.49
227 228 6.459573 GGTTGAATTGACAACTCAACTGCTAA 60.460 38.462 30.54 2.33 45.33 3.09
228 229 6.882610 TGAATTGACAACTCAACTGCTAAT 57.117 33.333 0.00 0.00 39.28 1.73
229 230 7.977789 TGAATTGACAACTCAACTGCTAATA 57.022 32.000 0.00 0.00 39.28 0.98
230 231 7.806690 TGAATTGACAACTCAACTGCTAATAC 58.193 34.615 0.00 0.00 39.28 1.89
231 232 7.661437 TGAATTGACAACTCAACTGCTAATACT 59.339 33.333 0.00 0.00 39.28 2.12
232 233 7.986085 ATTGACAACTCAACTGCTAATACTT 57.014 32.000 0.00 0.00 39.28 2.24
233 234 6.785488 TGACAACTCAACTGCTAATACTTG 57.215 37.500 0.00 0.00 0.00 3.16
234 235 6.521162 TGACAACTCAACTGCTAATACTTGA 58.479 36.000 0.00 0.00 0.00 3.02
235 236 6.646653 TGACAACTCAACTGCTAATACTTGAG 59.353 38.462 4.99 4.99 43.51 3.02
236 237 6.759272 ACAACTCAACTGCTAATACTTGAGA 58.241 36.000 12.09 0.00 41.42 3.27
237 238 7.217200 ACAACTCAACTGCTAATACTTGAGAA 58.783 34.615 12.09 0.00 41.42 2.87
238 239 7.880195 ACAACTCAACTGCTAATACTTGAGAAT 59.120 33.333 12.09 0.14 41.42 2.40
239 240 9.371136 CAACTCAACTGCTAATACTTGAGAATA 57.629 33.333 12.09 0.00 41.42 1.75
259 260 3.625314 TTTTTGGCTCCCCTTGTGT 57.375 47.368 0.00 0.00 0.00 3.72
260 261 1.408969 TTTTTGGCTCCCCTTGTGTC 58.591 50.000 0.00 0.00 0.00 3.67
261 262 0.821711 TTTTGGCTCCCCTTGTGTCG 60.822 55.000 0.00 0.00 0.00 4.35
262 263 1.701031 TTTGGCTCCCCTTGTGTCGA 61.701 55.000 0.00 0.00 0.00 4.20
263 264 1.701031 TTGGCTCCCCTTGTGTCGAA 61.701 55.000 0.00 0.00 0.00 3.71
264 265 1.299976 GGCTCCCCTTGTGTCGAAT 59.700 57.895 0.00 0.00 0.00 3.34
265 266 0.744771 GGCTCCCCTTGTGTCGAATC 60.745 60.000 0.00 0.00 0.00 2.52
266 267 0.036388 GCTCCCCTTGTGTCGAATCA 60.036 55.000 0.00 0.00 0.00 2.57
267 268 1.610624 GCTCCCCTTGTGTCGAATCAA 60.611 52.381 0.00 0.00 0.00 2.57
268 269 2.941415 GCTCCCCTTGTGTCGAATCAAT 60.941 50.000 4.42 0.00 0.00 2.57
269 270 3.681594 GCTCCCCTTGTGTCGAATCAATA 60.682 47.826 4.42 0.00 0.00 1.90
270 271 4.513442 CTCCCCTTGTGTCGAATCAATAA 58.487 43.478 4.42 0.00 0.00 1.40
271 272 4.912586 TCCCCTTGTGTCGAATCAATAAA 58.087 39.130 4.42 0.00 0.00 1.40
272 273 5.505780 TCCCCTTGTGTCGAATCAATAAAT 58.494 37.500 4.42 0.00 0.00 1.40
273 274 5.949354 TCCCCTTGTGTCGAATCAATAAATT 59.051 36.000 4.42 0.00 0.00 1.82
274 275 6.435904 TCCCCTTGTGTCGAATCAATAAATTT 59.564 34.615 0.00 0.00 0.00 1.82
275 276 6.531240 CCCCTTGTGTCGAATCAATAAATTTG 59.469 38.462 0.00 0.00 0.00 2.32
276 277 6.531240 CCCTTGTGTCGAATCAATAAATTTGG 59.469 38.462 0.00 1.78 0.00 3.28
277 278 6.531240 CCTTGTGTCGAATCAATAAATTTGGG 59.469 38.462 0.00 0.00 0.00 4.12
278 279 6.582677 TGTGTCGAATCAATAAATTTGGGT 57.417 33.333 0.00 0.00 0.00 4.51
279 280 6.987386 TGTGTCGAATCAATAAATTTGGGTT 58.013 32.000 0.00 0.00 0.00 4.11
280 281 6.865726 TGTGTCGAATCAATAAATTTGGGTTG 59.134 34.615 0.00 3.99 0.00 3.77
281 282 7.087639 GTGTCGAATCAATAAATTTGGGTTGA 58.912 34.615 14.00 14.00 35.33 3.18
282 283 7.596995 GTGTCGAATCAATAAATTTGGGTTGAA 59.403 33.333 15.01 2.31 34.62 2.69
283 284 8.310382 TGTCGAATCAATAAATTTGGGTTGAAT 58.690 29.630 15.01 9.74 34.62 2.57
284 285 9.796120 GTCGAATCAATAAATTTGGGTTGAATA 57.204 29.630 15.01 4.16 34.62 1.75
285 286 9.796120 TCGAATCAATAAATTTGGGTTGAATAC 57.204 29.630 15.01 10.41 34.62 1.89
286 287 9.801873 CGAATCAATAAATTTGGGTTGAATACT 57.198 29.630 15.01 5.42 34.62 2.12
297 298 4.996788 GGTTGAATACTCTACCCTCGAA 57.003 45.455 0.00 0.00 40.45 3.71
298 299 5.334724 GGTTGAATACTCTACCCTCGAAA 57.665 43.478 0.00 0.00 40.45 3.46
299 300 5.727434 GGTTGAATACTCTACCCTCGAAAA 58.273 41.667 0.00 0.00 40.45 2.29
300 301 5.579904 GGTTGAATACTCTACCCTCGAAAAC 59.420 44.000 0.00 0.00 40.45 2.43
301 302 6.396450 GTTGAATACTCTACCCTCGAAAACT 58.604 40.000 0.00 0.00 0.00 2.66
302 303 5.962433 TGAATACTCTACCCTCGAAAACTG 58.038 41.667 0.00 0.00 0.00 3.16
303 304 5.479375 TGAATACTCTACCCTCGAAAACTGT 59.521 40.000 0.00 0.00 0.00 3.55
304 305 5.997384 ATACTCTACCCTCGAAAACTGTT 57.003 39.130 0.00 0.00 0.00 3.16
305 306 4.684484 ACTCTACCCTCGAAAACTGTTT 57.316 40.909 0.00 0.00 0.00 2.83
306 307 4.629092 ACTCTACCCTCGAAAACTGTTTC 58.371 43.478 6.20 0.09 39.90 2.78
320 321 8.705048 GAAAACTGTTTCGATCCTCTATACTT 57.295 34.615 6.20 0.00 34.17 2.24
321 322 8.480643 AAAACTGTTTCGATCCTCTATACTTG 57.519 34.615 6.20 0.00 0.00 3.16
322 323 6.777213 ACTGTTTCGATCCTCTATACTTGT 57.223 37.500 0.00 0.00 0.00 3.16
323 324 6.565234 ACTGTTTCGATCCTCTATACTTGTG 58.435 40.000 0.00 0.00 0.00 3.33
324 325 5.902681 TGTTTCGATCCTCTATACTTGTGG 58.097 41.667 0.00 0.00 0.00 4.17
325 326 5.163447 TGTTTCGATCCTCTATACTTGTGGG 60.163 44.000 0.00 0.00 0.00 4.61
326 327 4.180377 TCGATCCTCTATACTTGTGGGT 57.820 45.455 0.00 0.00 0.00 4.51
327 328 4.543689 TCGATCCTCTATACTTGTGGGTT 58.456 43.478 0.00 0.00 0.00 4.11
328 329 5.698104 TCGATCCTCTATACTTGTGGGTTA 58.302 41.667 0.00 0.00 0.00 2.85
329 330 6.312529 TCGATCCTCTATACTTGTGGGTTAT 58.687 40.000 0.00 0.00 0.00 1.89
330 331 6.433404 TCGATCCTCTATACTTGTGGGTTATC 59.567 42.308 0.00 0.00 0.00 1.75
366 367 2.176148 TCCACGGACTGATAGGGTATCA 59.824 50.000 0.00 0.00 42.56 2.15
437 439 3.065095 CGGTTTAAAGGTCCGTGTTGAAA 59.935 43.478 7.40 0.00 39.51 2.69
495 505 4.647611 CACCTATTGTTGGTTGGTAGTGA 58.352 43.478 0.00 0.00 35.28 3.41
537 547 9.991388 ATTGTTGATTTGAAAAACAGTCATTTG 57.009 25.926 0.00 0.00 35.39 2.32
549 559 9.463443 AAAAACAGTCATTTGCTAAATAGACAC 57.537 29.630 11.65 1.89 34.38 3.67
550 560 7.986085 AACAGTCATTTGCTAAATAGACACT 57.014 32.000 11.65 0.00 34.38 3.55
554 564 8.671921 CAGTCATTTGCTAAATAGACACTTCAT 58.328 33.333 11.65 0.00 34.38 2.57
600 610 1.335145 ATATGGAGCCCATTTGCAGC 58.665 50.000 11.36 0.00 42.23 5.25
601 611 1.102809 TATGGAGCCCATTTGCAGCG 61.103 55.000 11.36 0.00 42.23 5.18
603 613 2.123428 GGAGCCCATTTGCAGCGAT 61.123 57.895 0.00 0.00 0.00 4.58
605 615 1.660560 GAGCCCATTTGCAGCGATGT 61.661 55.000 1.22 0.00 0.00 3.06
617 640 1.135083 CAGCGATGTTCCGTAAGTCCT 60.135 52.381 0.00 0.00 0.00 3.85
627 650 8.851541 ATGTTCCGTAAGTCCTGTTTTATTTA 57.148 30.769 0.00 0.00 0.00 1.40
629 652 9.287373 TGTTCCGTAAGTCCTGTTTTATTTATT 57.713 29.630 0.00 0.00 0.00 1.40
806 829 4.780946 GCGTTGCGTGTATAAACAATCGAT 60.781 41.667 0.00 0.00 37.36 3.59
812 835 6.037720 TGCGTGTATAAACAATCGATTGGATT 59.962 34.615 34.69 29.34 46.29 3.01
828 851 7.166307 TCGATTGGATTAGTTTGATTACGTACG 59.834 37.037 15.01 15.01 0.00 3.67
829 852 7.043854 CGATTGGATTAGTTTGATTACGTACGT 60.044 37.037 25.98 25.98 0.00 3.57
830 853 9.236691 GATTGGATTAGTTTGATTACGTACGTA 57.763 33.333 23.60 23.60 0.00 3.57
831 854 9.754382 ATTGGATTAGTTTGATTACGTACGTAT 57.246 29.630 27.30 17.33 0.00 3.06
888 911 3.261897 CCCAGACTACAAGGTTGACATCT 59.738 47.826 0.00 0.00 0.00 2.90
930 953 2.034812 GTCAAGTCGTTCTCTGTGGAGT 59.965 50.000 0.00 0.00 40.29 3.85
969 996 4.584688 GCAAACAATGGCTGGCTC 57.415 55.556 2.00 0.00 0.00 4.70
981 1009 6.445139 ACAATGGCTGGCTCCTTATATATACT 59.555 38.462 2.00 0.00 0.00 2.12
987 1015 4.299295 TGGCTCCTTATATATACTCCCCCA 59.701 45.833 0.00 0.00 0.00 4.96
999 1027 1.272147 ACTCCCCCAAGCAACTTCATC 60.272 52.381 0.00 0.00 0.00 2.92
1030 1058 3.163630 AGCAAACAAACACTCGCAATT 57.836 38.095 0.00 0.00 0.00 2.32
1031 1059 4.300189 AGCAAACAAACACTCGCAATTA 57.700 36.364 0.00 0.00 0.00 1.40
1032 1060 4.677584 AGCAAACAAACACTCGCAATTAA 58.322 34.783 0.00 0.00 0.00 1.40
1033 1061 5.288804 AGCAAACAAACACTCGCAATTAAT 58.711 33.333 0.00 0.00 0.00 1.40
1042 1070 3.694072 CACTCGCAATTAATCCTCCCAAA 59.306 43.478 0.00 0.00 0.00 3.28
1061 1089 8.129496 TCCCAAACTTTACAAACTTCTTCTTT 57.871 30.769 0.00 0.00 0.00 2.52
1383 1420 4.292178 GCCGAGATGAGGGAGGCG 62.292 72.222 0.00 0.00 38.28 5.52
1626 1663 4.641396 TGATTTCTCGTTCCAAGTCATGT 58.359 39.130 0.00 0.00 0.00 3.21
1627 1664 5.789521 TGATTTCTCGTTCCAAGTCATGTA 58.210 37.500 0.00 0.00 0.00 2.29
1628 1665 5.637810 TGATTTCTCGTTCCAAGTCATGTAC 59.362 40.000 0.00 0.00 0.00 2.90
1629 1666 4.866508 TTCTCGTTCCAAGTCATGTACT 57.133 40.909 0.00 0.00 41.49 2.73
1630 1667 5.970317 TTCTCGTTCCAAGTCATGTACTA 57.030 39.130 0.00 0.00 37.50 1.82
1631 1668 5.306532 TCTCGTTCCAAGTCATGTACTAC 57.693 43.478 0.00 0.00 37.50 2.73
1632 1669 5.008331 TCTCGTTCCAAGTCATGTACTACT 58.992 41.667 0.00 0.00 37.50 2.57
1633 1670 6.175471 TCTCGTTCCAAGTCATGTACTACTA 58.825 40.000 0.00 0.00 37.50 1.82
1634 1671 6.315642 TCTCGTTCCAAGTCATGTACTACTAG 59.684 42.308 0.00 0.00 37.50 2.57
1635 1672 5.942236 TCGTTCCAAGTCATGTACTACTAGT 59.058 40.000 0.00 0.00 37.50 2.57
1636 1673 6.432162 TCGTTCCAAGTCATGTACTACTAGTT 59.568 38.462 0.00 0.00 37.50 2.24
1951 2218 6.012745 AGAATTTCTTGTCTGGCAGGTTTAT 58.987 36.000 15.73 0.00 0.00 1.40
2150 2418 7.847096 ACTTCCTTGAAACAAAAATTAGTGGT 58.153 30.769 0.00 0.00 0.00 4.16
2151 2419 8.318412 ACTTCCTTGAAACAAAAATTAGTGGTT 58.682 29.630 0.00 0.00 0.00 3.67
2466 2805 3.042682 TCTGTGGTTGGACAGTTAGGAA 58.957 45.455 0.00 0.00 43.38 3.36
2537 2876 3.026630 AGCGACTTCGTCAATCTCAAA 57.973 42.857 0.00 0.00 42.22 2.69
2548 2887 3.058293 GTCAATCTCAAAACGATGTGCCA 60.058 43.478 0.00 0.00 0.00 4.92
2551 2890 0.109597 CTCAAAACGATGTGCCAGCC 60.110 55.000 0.00 0.00 0.00 4.85
2611 2950 3.576550 TGTGTGCATTCTAGGTGTGAGTA 59.423 43.478 0.00 0.00 0.00 2.59
2623 2962 9.856162 TTCTAGGTGTGAGTATATATGTGTACA 57.144 33.333 0.00 0.00 0.00 2.90
2626 2965 7.896811 AGGTGTGAGTATATATGTGTACATGG 58.103 38.462 7.73 0.00 37.15 3.66
2627 2966 6.590292 GGTGTGAGTATATATGTGTACATGGC 59.410 42.308 7.73 0.00 37.15 4.40
2628 2967 6.590292 GTGTGAGTATATATGTGTACATGGCC 59.410 42.308 7.73 0.00 37.15 5.36
2629 2968 6.496911 TGTGAGTATATATGTGTACATGGCCT 59.503 38.462 3.32 0.00 37.15 5.19
2630 2969 7.036220 GTGAGTATATATGTGTACATGGCCTC 58.964 42.308 3.32 6.46 37.15 4.70
2631 2970 6.154534 TGAGTATATATGTGTACATGGCCTCC 59.845 42.308 3.32 0.00 37.15 4.30
2632 2971 6.022958 AGTATATATGTGTACATGGCCTCCA 58.977 40.000 3.32 0.00 37.15 3.86
2633 2972 6.673978 AGTATATATGTGTACATGGCCTCCAT 59.326 38.462 3.32 0.00 46.37 3.41
2634 2973 4.729552 ATATGTGTACATGGCCTCCATT 57.270 40.909 3.32 0.00 42.23 3.16
2635 2974 2.897271 TGTGTACATGGCCTCCATTT 57.103 45.000 3.32 0.00 42.23 2.32
2636 2975 4.518278 ATGTGTACATGGCCTCCATTTA 57.482 40.909 3.32 0.00 42.23 1.40
2637 2976 4.518278 TGTGTACATGGCCTCCATTTAT 57.482 40.909 3.32 0.00 42.23 1.40
2638 2977 5.638530 TGTGTACATGGCCTCCATTTATA 57.361 39.130 3.32 0.00 42.23 0.98
2639 2978 5.620206 TGTGTACATGGCCTCCATTTATAG 58.380 41.667 3.32 0.00 42.23 1.31
2640 2979 4.455877 GTGTACATGGCCTCCATTTATAGC 59.544 45.833 3.32 0.00 42.23 2.97
2641 2980 4.350816 TGTACATGGCCTCCATTTATAGCT 59.649 41.667 3.32 0.00 42.23 3.32
2642 2981 4.026356 ACATGGCCTCCATTTATAGCTC 57.974 45.455 3.32 0.00 42.23 4.09
2643 2982 3.245052 ACATGGCCTCCATTTATAGCTCC 60.245 47.826 3.32 0.00 42.23 4.70
2644 2983 1.705186 TGGCCTCCATTTATAGCTCCC 59.295 52.381 3.32 0.00 0.00 4.30
2645 2984 1.988846 GGCCTCCATTTATAGCTCCCT 59.011 52.381 0.00 0.00 0.00 4.20
2646 2985 2.376855 GGCCTCCATTTATAGCTCCCTT 59.623 50.000 0.00 0.00 0.00 3.95
2647 2986 3.560239 GGCCTCCATTTATAGCTCCCTTC 60.560 52.174 0.00 0.00 0.00 3.46
2648 2987 3.073062 GCCTCCATTTATAGCTCCCTTCA 59.927 47.826 0.00 0.00 0.00 3.02
2649 2988 4.805609 GCCTCCATTTATAGCTCCCTTCAG 60.806 50.000 0.00 0.00 0.00 3.02
2650 2989 4.594920 CCTCCATTTATAGCTCCCTTCAGA 59.405 45.833 0.00 0.00 0.00 3.27
2651 2990 5.279910 CCTCCATTTATAGCTCCCTTCAGAG 60.280 48.000 0.00 0.00 36.92 3.35
2668 3007 0.678950 GAGCATCTCTAGCAGACCCC 59.321 60.000 0.00 0.00 32.26 4.95
2669 3008 0.264359 AGCATCTCTAGCAGACCCCT 59.736 55.000 0.00 0.00 32.26 4.79
2670 3009 1.127343 GCATCTCTAGCAGACCCCTT 58.873 55.000 0.00 0.00 32.26 3.95
2671 3010 2.091055 AGCATCTCTAGCAGACCCCTTA 60.091 50.000 0.00 0.00 32.26 2.69
2672 3011 2.903135 GCATCTCTAGCAGACCCCTTAT 59.097 50.000 0.00 0.00 32.26 1.73
2673 3012 4.090090 GCATCTCTAGCAGACCCCTTATA 58.910 47.826 0.00 0.00 32.26 0.98
2674 3013 4.714308 GCATCTCTAGCAGACCCCTTATAT 59.286 45.833 0.00 0.00 32.26 0.86
2675 3014 5.163457 GCATCTCTAGCAGACCCCTTATATC 60.163 48.000 0.00 0.00 32.26 1.63
2676 3015 4.936802 TCTCTAGCAGACCCCTTATATCC 58.063 47.826 0.00 0.00 0.00 2.59
2677 3016 4.027437 CTCTAGCAGACCCCTTATATCCC 58.973 52.174 0.00 0.00 0.00 3.85
2678 3017 2.815357 AGCAGACCCCTTATATCCCA 57.185 50.000 0.00 0.00 0.00 4.37
2679 3018 2.339769 AGCAGACCCCTTATATCCCAC 58.660 52.381 0.00 0.00 0.00 4.61
2680 3019 2.089925 AGCAGACCCCTTATATCCCACT 60.090 50.000 0.00 0.00 0.00 4.00
2681 3020 2.039084 GCAGACCCCTTATATCCCACTG 59.961 54.545 0.00 0.00 0.00 3.66
2682 3021 3.587498 CAGACCCCTTATATCCCACTGA 58.413 50.000 0.00 0.00 0.00 3.41
2683 3022 3.973973 CAGACCCCTTATATCCCACTGAA 59.026 47.826 0.00 0.00 0.00 3.02
2684 3023 3.974642 AGACCCCTTATATCCCACTGAAC 59.025 47.826 0.00 0.00 0.00 3.18
2685 3024 3.974642 GACCCCTTATATCCCACTGAACT 59.025 47.826 0.00 0.00 0.00 3.01
2686 3025 3.716872 ACCCCTTATATCCCACTGAACTG 59.283 47.826 0.00 0.00 0.00 3.16
2687 3026 3.716872 CCCCTTATATCCCACTGAACTGT 59.283 47.826 0.00 0.00 0.00 3.55
2688 3027 4.905456 CCCCTTATATCCCACTGAACTGTA 59.095 45.833 0.00 0.00 0.00 2.74
2689 3028 5.368523 CCCCTTATATCCCACTGAACTGTAA 59.631 44.000 0.00 0.00 0.00 2.41
2690 3029 6.126594 CCCCTTATATCCCACTGAACTGTAAA 60.127 42.308 0.00 0.00 0.00 2.01
2691 3030 7.343357 CCCTTATATCCCACTGAACTGTAAAA 58.657 38.462 0.00 0.00 0.00 1.52
2692 3031 7.998964 CCCTTATATCCCACTGAACTGTAAAAT 59.001 37.037 0.00 0.00 0.00 1.82
2696 3035 8.747538 ATATCCCACTGAACTGTAAAATAACC 57.252 34.615 0.00 0.00 0.00 2.85
2697 3036 5.942961 TCCCACTGAACTGTAAAATAACCA 58.057 37.500 0.00 0.00 0.00 3.67
2698 3037 6.548321 TCCCACTGAACTGTAAAATAACCAT 58.452 36.000 0.00 0.00 0.00 3.55
2699 3038 6.657541 TCCCACTGAACTGTAAAATAACCATC 59.342 38.462 0.00 0.00 0.00 3.51
2700 3039 6.432783 CCCACTGAACTGTAAAATAACCATCA 59.567 38.462 0.00 0.00 0.00 3.07
2701 3040 7.362056 CCCACTGAACTGTAAAATAACCATCAG 60.362 40.741 0.00 0.00 38.14 2.90
2702 3041 7.174946 CCACTGAACTGTAAAATAACCATCAGT 59.825 37.037 0.00 0.00 44.05 3.41
2703 3042 8.567948 CACTGAACTGTAAAATAACCATCAGTT 58.432 33.333 7.85 7.85 42.04 3.16
2704 3043 9.131791 ACTGAACTGTAAAATAACCATCAGTTT 57.868 29.630 9.19 0.00 41.41 2.66
2705 3044 9.965824 CTGAACTGTAAAATAACCATCAGTTTT 57.034 29.630 9.19 0.00 43.15 2.43
2706 3045 9.959749 TGAACTGTAAAATAACCATCAGTTTTC 57.040 29.630 9.19 0.49 43.15 2.29
2707 3046 9.959749 GAACTGTAAAATAACCATCAGTTTTCA 57.040 29.630 9.19 0.00 43.15 2.69
2714 3053 8.532977 AAATAACCATCAGTTTTCAATTTCGG 57.467 30.769 0.00 0.00 40.05 4.30
2715 3054 5.782893 AACCATCAGTTTTCAATTTCGGA 57.217 34.783 0.00 0.00 33.89 4.55
2716 3055 5.121221 ACCATCAGTTTTCAATTTCGGAC 57.879 39.130 0.00 0.00 0.00 4.79
2717 3056 4.158384 CCATCAGTTTTCAATTTCGGACG 58.842 43.478 0.00 0.00 0.00 4.79
2718 3057 3.889196 TCAGTTTTCAATTTCGGACGG 57.111 42.857 0.00 0.00 0.00 4.79
2719 3058 3.468770 TCAGTTTTCAATTTCGGACGGA 58.531 40.909 0.00 0.00 0.00 4.69
2720 3059 3.878103 TCAGTTTTCAATTTCGGACGGAA 59.122 39.130 0.00 0.00 0.00 4.30
2729 3068 1.799544 TTCGGACGGAAAAAGTAGGC 58.200 50.000 0.00 0.00 0.00 3.93
2730 3069 0.037046 TCGGACGGAAAAAGTAGGCC 60.037 55.000 0.00 0.00 0.00 5.19
2732 3071 0.037046 GGACGGAAAAAGTAGGCCGA 60.037 55.000 7.16 0.00 46.29 5.54
2733 3072 1.608801 GGACGGAAAAAGTAGGCCGAA 60.609 52.381 7.16 0.00 46.29 4.30
2734 3073 1.462283 GACGGAAAAAGTAGGCCGAAC 59.538 52.381 7.16 0.00 46.29 3.95
2735 3074 1.202675 ACGGAAAAAGTAGGCCGAACA 60.203 47.619 13.01 0.00 46.29 3.18
2736 3075 1.463444 CGGAAAAAGTAGGCCGAACAG 59.537 52.381 13.01 0.00 46.29 3.16
2737 3076 2.774687 GGAAAAAGTAGGCCGAACAGA 58.225 47.619 13.01 0.00 0.00 3.41
2738 3077 2.483106 GGAAAAAGTAGGCCGAACAGAC 59.517 50.000 13.01 0.00 0.00 3.51
2739 3078 2.922740 AAAAGTAGGCCGAACAGACA 57.077 45.000 13.01 0.00 0.00 3.41
2740 3079 2.165319 AAAGTAGGCCGAACAGACAC 57.835 50.000 13.01 0.00 0.00 3.67
2741 3080 1.045407 AAGTAGGCCGAACAGACACA 58.955 50.000 13.01 0.00 0.00 3.72
2742 3081 1.267121 AGTAGGCCGAACAGACACAT 58.733 50.000 13.01 0.00 0.00 3.21
2743 3082 1.623811 AGTAGGCCGAACAGACACATT 59.376 47.619 13.01 0.00 0.00 2.71
2744 3083 2.038557 AGTAGGCCGAACAGACACATTT 59.961 45.455 13.01 0.00 0.00 2.32
2745 3084 1.981256 AGGCCGAACAGACACATTTT 58.019 45.000 0.00 0.00 0.00 1.82
2746 3085 3.134574 AGGCCGAACAGACACATTTTA 57.865 42.857 0.00 0.00 0.00 1.52
2747 3086 2.812011 AGGCCGAACAGACACATTTTAC 59.188 45.455 0.00 0.00 0.00 2.01
2748 3087 2.550606 GGCCGAACAGACACATTTTACA 59.449 45.455 0.00 0.00 0.00 2.41
2749 3088 3.551551 GCCGAACAGACACATTTTACAC 58.448 45.455 0.00 0.00 0.00 2.90
2750 3089 3.608474 GCCGAACAGACACATTTTACACC 60.608 47.826 0.00 0.00 0.00 4.16
2751 3090 3.813166 CCGAACAGACACATTTTACACCT 59.187 43.478 0.00 0.00 0.00 4.00
2752 3091 4.274950 CCGAACAGACACATTTTACACCTT 59.725 41.667 0.00 0.00 0.00 3.50
2753 3092 5.440685 CGAACAGACACATTTTACACCTTC 58.559 41.667 0.00 0.00 0.00 3.46
2754 3093 5.418310 AACAGACACATTTTACACCTTCG 57.582 39.130 0.00 0.00 0.00 3.79
2755 3094 4.699637 ACAGACACATTTTACACCTTCGA 58.300 39.130 0.00 0.00 0.00 3.71
2756 3095 4.510340 ACAGACACATTTTACACCTTCGAC 59.490 41.667 0.00 0.00 0.00 4.20
2757 3096 4.062991 AGACACATTTTACACCTTCGACC 58.937 43.478 0.00 0.00 0.00 4.79
2758 3097 4.062991 GACACATTTTACACCTTCGACCT 58.937 43.478 0.00 0.00 0.00 3.85
2759 3098 4.457466 ACACATTTTACACCTTCGACCTT 58.543 39.130 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.097742 AGAATTATGACGGATGTGGTTCA 57.902 39.130 0.00 0.00 0.00 3.18
1 2 4.511826 GGAGAATTATGACGGATGTGGTTC 59.488 45.833 0.00 0.00 0.00 3.62
2 3 4.080582 TGGAGAATTATGACGGATGTGGTT 60.081 41.667 0.00 0.00 0.00 3.67
3 4 3.454447 TGGAGAATTATGACGGATGTGGT 59.546 43.478 0.00 0.00 0.00 4.16
4 5 4.071961 TGGAGAATTATGACGGATGTGG 57.928 45.455 0.00 0.00 0.00 4.17
5 6 5.178252 GTGATGGAGAATTATGACGGATGTG 59.822 44.000 0.00 0.00 0.00 3.21
6 7 5.300752 GTGATGGAGAATTATGACGGATGT 58.699 41.667 0.00 0.00 0.00 3.06
7 8 4.692625 GGTGATGGAGAATTATGACGGATG 59.307 45.833 0.00 0.00 0.00 3.51
8 9 4.561530 CGGTGATGGAGAATTATGACGGAT 60.562 45.833 0.00 0.00 0.00 4.18
9 10 3.243737 CGGTGATGGAGAATTATGACGGA 60.244 47.826 0.00 0.00 0.00 4.69
10 11 3.059884 CGGTGATGGAGAATTATGACGG 58.940 50.000 0.00 0.00 0.00 4.79
11 12 3.977427 TCGGTGATGGAGAATTATGACG 58.023 45.455 0.00 0.00 0.00 4.35
12 13 4.932200 GGATCGGTGATGGAGAATTATGAC 59.068 45.833 0.00 0.00 0.00 3.06
13 14 4.592778 TGGATCGGTGATGGAGAATTATGA 59.407 41.667 0.00 0.00 0.00 2.15
14 15 4.898320 TGGATCGGTGATGGAGAATTATG 58.102 43.478 0.00 0.00 0.00 1.90
15 16 5.567037 TTGGATCGGTGATGGAGAATTAT 57.433 39.130 0.00 0.00 0.00 1.28
16 17 5.308014 CATTGGATCGGTGATGGAGAATTA 58.692 41.667 0.00 0.00 0.00 1.40
17 18 3.931907 TTGGATCGGTGATGGAGAATT 57.068 42.857 0.00 0.00 0.00 2.17
18 19 3.748083 CATTGGATCGGTGATGGAGAAT 58.252 45.455 0.00 0.00 0.00 2.40
19 20 2.746142 GCATTGGATCGGTGATGGAGAA 60.746 50.000 0.00 0.00 0.00 2.87
20 21 1.202687 GCATTGGATCGGTGATGGAGA 60.203 52.381 0.00 0.00 0.00 3.71
21 22 1.233019 GCATTGGATCGGTGATGGAG 58.767 55.000 0.00 0.00 0.00 3.86
22 23 0.179020 GGCATTGGATCGGTGATGGA 60.179 55.000 0.00 0.00 0.00 3.41
23 24 0.179009 AGGCATTGGATCGGTGATGG 60.179 55.000 0.00 0.00 0.00 3.51
24 25 2.146342 GTAGGCATTGGATCGGTGATG 58.854 52.381 0.00 0.00 0.00 3.07
25 26 1.270305 CGTAGGCATTGGATCGGTGAT 60.270 52.381 0.00 0.00 0.00 3.06
26 27 0.104120 CGTAGGCATTGGATCGGTGA 59.896 55.000 0.00 0.00 0.00 4.02
27 28 0.104120 TCGTAGGCATTGGATCGGTG 59.896 55.000 0.00 0.00 0.00 4.94
28 29 0.389391 CTCGTAGGCATTGGATCGGT 59.611 55.000 0.00 0.00 0.00 4.69
29 30 0.946221 GCTCGTAGGCATTGGATCGG 60.946 60.000 0.00 0.00 0.00 4.18
30 31 0.032678 AGCTCGTAGGCATTGGATCG 59.967 55.000 0.00 0.00 34.17 3.69
31 32 2.246719 AAGCTCGTAGGCATTGGATC 57.753 50.000 0.00 0.00 34.17 3.36
32 33 2.717639 AAAGCTCGTAGGCATTGGAT 57.282 45.000 0.00 0.00 34.17 3.41
33 34 2.290008 TGAAAAGCTCGTAGGCATTGGA 60.290 45.455 0.00 0.00 34.17 3.53
34 35 2.083774 TGAAAAGCTCGTAGGCATTGG 58.916 47.619 0.00 0.00 34.17 3.16
35 36 2.483877 TGTGAAAAGCTCGTAGGCATTG 59.516 45.455 0.00 0.00 34.17 2.82
36 37 2.778299 TGTGAAAAGCTCGTAGGCATT 58.222 42.857 0.00 0.00 34.17 3.56
37 38 2.472695 TGTGAAAAGCTCGTAGGCAT 57.527 45.000 0.00 0.00 34.17 4.40
38 39 2.472695 ATGTGAAAAGCTCGTAGGCA 57.527 45.000 0.00 0.00 34.17 4.75
39 40 4.332819 ACAATATGTGAAAAGCTCGTAGGC 59.667 41.667 0.00 0.00 0.00 3.93
40 41 6.422776 AACAATATGTGAAAAGCTCGTAGG 57.577 37.500 0.00 0.00 0.00 3.18
41 42 6.313905 AGGAACAATATGTGAAAAGCTCGTAG 59.686 38.462 0.00 0.00 0.00 3.51
42 43 6.170506 AGGAACAATATGTGAAAAGCTCGTA 58.829 36.000 0.00 0.00 0.00 3.43
43 44 5.003804 AGGAACAATATGTGAAAAGCTCGT 58.996 37.500 0.00 0.00 0.00 4.18
44 45 5.551760 AGGAACAATATGTGAAAAGCTCG 57.448 39.130 0.00 0.00 0.00 5.03
45 46 5.563842 CGAGGAACAATATGTGAAAAGCTC 58.436 41.667 0.00 0.00 0.00 4.09
46 47 4.142600 GCGAGGAACAATATGTGAAAAGCT 60.143 41.667 0.00 0.00 0.00 3.74
47 48 4.098416 GCGAGGAACAATATGTGAAAAGC 58.902 43.478 0.00 0.00 0.00 3.51
48 49 5.551760 AGCGAGGAACAATATGTGAAAAG 57.448 39.130 0.00 0.00 0.00 2.27
49 50 5.957842 AAGCGAGGAACAATATGTGAAAA 57.042 34.783 0.00 0.00 0.00 2.29
50 51 7.624360 AATAAGCGAGGAACAATATGTGAAA 57.376 32.000 0.00 0.00 0.00 2.69
51 52 7.624360 AAATAAGCGAGGAACAATATGTGAA 57.376 32.000 0.00 0.00 0.00 3.18
52 53 7.985184 AGTAAATAAGCGAGGAACAATATGTGA 59.015 33.333 0.00 0.00 0.00 3.58
53 54 8.142994 AGTAAATAAGCGAGGAACAATATGTG 57.857 34.615 0.00 0.00 0.00 3.21
54 55 8.732746 AAGTAAATAAGCGAGGAACAATATGT 57.267 30.769 0.00 0.00 0.00 2.29
58 59 7.749126 CGAAAAAGTAAATAAGCGAGGAACAAT 59.251 33.333 0.00 0.00 0.00 2.71
59 60 7.073265 CGAAAAAGTAAATAAGCGAGGAACAA 58.927 34.615 0.00 0.00 0.00 2.83
60 61 6.203338 ACGAAAAAGTAAATAAGCGAGGAACA 59.797 34.615 0.00 0.00 0.00 3.18
61 62 6.596703 ACGAAAAAGTAAATAAGCGAGGAAC 58.403 36.000 0.00 0.00 0.00 3.62
62 63 6.790285 ACGAAAAAGTAAATAAGCGAGGAA 57.210 33.333 0.00 0.00 0.00 3.36
63 64 6.595794 CAACGAAAAAGTAAATAAGCGAGGA 58.404 36.000 0.00 0.00 0.00 3.71
64 65 5.283012 GCAACGAAAAAGTAAATAAGCGAGG 59.717 40.000 0.00 0.00 0.00 4.63
65 66 6.077838 AGCAACGAAAAAGTAAATAAGCGAG 58.922 36.000 0.00 0.00 0.00 5.03
66 67 5.992729 AGCAACGAAAAAGTAAATAAGCGA 58.007 33.333 0.00 0.00 0.00 4.93
67 68 7.948513 ATAGCAACGAAAAAGTAAATAAGCG 57.051 32.000 0.00 0.00 0.00 4.68
68 69 9.124807 ACAATAGCAACGAAAAAGTAAATAAGC 57.875 29.630 0.00 0.00 0.00 3.09
72 73 9.953697 TGTAACAATAGCAACGAAAAAGTAAAT 57.046 25.926 0.00 0.00 0.00 1.40
73 74 9.784680 TTGTAACAATAGCAACGAAAAAGTAAA 57.215 25.926 0.00 0.00 0.00 2.01
74 75 9.953697 ATTGTAACAATAGCAACGAAAAAGTAA 57.046 25.926 0.00 0.00 0.00 2.24
75 76 9.601971 GATTGTAACAATAGCAACGAAAAAGTA 57.398 29.630 0.00 0.00 0.00 2.24
76 77 8.132362 TGATTGTAACAATAGCAACGAAAAAGT 58.868 29.630 0.00 0.00 0.00 2.66
77 78 8.417176 GTGATTGTAACAATAGCAACGAAAAAG 58.583 33.333 0.00 0.00 0.00 2.27
78 79 8.132362 AGTGATTGTAACAATAGCAACGAAAAA 58.868 29.630 0.00 0.00 0.00 1.94
79 80 7.644490 AGTGATTGTAACAATAGCAACGAAAA 58.356 30.769 0.00 0.00 0.00 2.29
80 81 7.197071 AGTGATTGTAACAATAGCAACGAAA 57.803 32.000 0.00 0.00 0.00 3.46
81 82 6.795098 AGTGATTGTAACAATAGCAACGAA 57.205 33.333 0.00 0.00 0.00 3.85
82 83 6.869388 TGTAGTGATTGTAACAATAGCAACGA 59.131 34.615 0.00 0.00 0.00 3.85
83 84 7.056002 TGTAGTGATTGTAACAATAGCAACG 57.944 36.000 0.00 0.00 0.00 4.10
84 85 9.672086 TTTTGTAGTGATTGTAACAATAGCAAC 57.328 29.630 0.00 0.00 32.31 4.17
85 86 9.672086 GTTTTGTAGTGATTGTAACAATAGCAA 57.328 29.630 0.00 0.00 32.31 3.91
86 87 8.293867 GGTTTTGTAGTGATTGTAACAATAGCA 58.706 33.333 0.00 0.00 34.00 3.49
87 88 7.753580 GGGTTTTGTAGTGATTGTAACAATAGC 59.246 37.037 0.00 0.00 33.46 2.97
88 89 8.788806 TGGGTTTTGTAGTGATTGTAACAATAG 58.211 33.333 0.00 0.00 32.31 1.73
89 90 8.693120 TGGGTTTTGTAGTGATTGTAACAATA 57.307 30.769 0.00 0.00 32.31 1.90
90 91 7.589958 TGGGTTTTGTAGTGATTGTAACAAT 57.410 32.000 0.00 0.00 32.31 2.71
91 92 7.406031 TTGGGTTTTGTAGTGATTGTAACAA 57.594 32.000 0.00 0.00 0.00 2.83
92 93 7.406031 TTTGGGTTTTGTAGTGATTGTAACA 57.594 32.000 0.00 0.00 0.00 2.41
93 94 8.705048 TTTTTGGGTTTTGTAGTGATTGTAAC 57.295 30.769 0.00 0.00 0.00 2.50
105 106 9.402320 AGCAAAAGTAATATTTTTGGGTTTTGT 57.598 25.926 18.29 2.39 42.76 2.83
106 107 9.662545 CAGCAAAAGTAATATTTTTGGGTTTTG 57.337 29.630 18.29 10.41 42.76 2.44
107 108 9.402320 ACAGCAAAAGTAATATTTTTGGGTTTT 57.598 25.926 18.29 0.73 42.76 2.43
108 109 8.972458 ACAGCAAAAGTAATATTTTTGGGTTT 57.028 26.923 18.29 1.53 42.76 3.27
109 110 8.835439 CAACAGCAAAAGTAATATTTTTGGGTT 58.165 29.630 18.29 4.02 42.76 4.11
110 111 7.990314 ACAACAGCAAAAGTAATATTTTTGGGT 59.010 29.630 18.29 3.52 42.76 4.51
111 112 8.376889 ACAACAGCAAAAGTAATATTTTTGGG 57.623 30.769 18.29 0.30 42.76 4.12
115 116 9.187455 CGGTAACAACAGCAAAAGTAATATTTT 57.813 29.630 0.00 0.00 32.65 1.82
116 117 8.354426 ACGGTAACAACAGCAAAAGTAATATTT 58.646 29.630 0.00 0.00 0.00 1.40
117 118 7.878036 ACGGTAACAACAGCAAAAGTAATATT 58.122 30.769 0.00 0.00 0.00 1.28
118 119 7.443259 ACGGTAACAACAGCAAAAGTAATAT 57.557 32.000 0.00 0.00 0.00 1.28
119 120 6.864360 ACGGTAACAACAGCAAAAGTAATA 57.136 33.333 0.00 0.00 0.00 0.98
120 121 5.761165 ACGGTAACAACAGCAAAAGTAAT 57.239 34.783 0.00 0.00 0.00 1.89
121 122 5.564048 AACGGTAACAACAGCAAAAGTAA 57.436 34.783 0.00 0.00 0.00 2.24
122 123 5.816777 AGTAACGGTAACAACAGCAAAAGTA 59.183 36.000 0.00 0.00 0.00 2.24
123 124 4.637091 AGTAACGGTAACAACAGCAAAAGT 59.363 37.500 0.00 0.00 0.00 2.66
124 125 5.164606 AGTAACGGTAACAACAGCAAAAG 57.835 39.130 0.00 0.00 0.00 2.27
125 126 5.448904 GGAAGTAACGGTAACAACAGCAAAA 60.449 40.000 0.00 0.00 0.00 2.44
126 127 4.035441 GGAAGTAACGGTAACAACAGCAAA 59.965 41.667 0.00 0.00 0.00 3.68
127 128 3.560896 GGAAGTAACGGTAACAACAGCAA 59.439 43.478 0.00 0.00 0.00 3.91
128 129 3.132925 GGAAGTAACGGTAACAACAGCA 58.867 45.455 0.00 0.00 0.00 4.41
129 130 3.132925 TGGAAGTAACGGTAACAACAGC 58.867 45.455 0.00 0.00 0.00 4.40
130 131 6.161381 AGTATGGAAGTAACGGTAACAACAG 58.839 40.000 0.00 0.00 0.00 3.16
131 132 6.100404 AGTATGGAAGTAACGGTAACAACA 57.900 37.500 0.00 0.00 0.00 3.33
132 133 7.315890 AGTAGTATGGAAGTAACGGTAACAAC 58.684 38.462 0.00 0.00 0.00 3.32
133 134 7.466746 AGTAGTATGGAAGTAACGGTAACAA 57.533 36.000 0.00 0.00 0.00 2.83
134 135 7.466746 AAGTAGTATGGAAGTAACGGTAACA 57.533 36.000 0.00 0.00 0.00 2.41
135 136 7.201470 GCAAAGTAGTATGGAAGTAACGGTAAC 60.201 40.741 0.00 0.00 0.00 2.50
136 137 6.813152 GCAAAGTAGTATGGAAGTAACGGTAA 59.187 38.462 0.00 0.00 0.00 2.85
137 138 6.153340 AGCAAAGTAGTATGGAAGTAACGGTA 59.847 38.462 0.00 0.00 0.00 4.02
138 139 5.046807 AGCAAAGTAGTATGGAAGTAACGGT 60.047 40.000 0.00 0.00 0.00 4.83
139 140 5.416947 AGCAAAGTAGTATGGAAGTAACGG 58.583 41.667 0.00 0.00 0.00 4.44
140 141 7.256286 AGTAGCAAAGTAGTATGGAAGTAACG 58.744 38.462 0.00 0.00 0.00 3.18
153 154 9.226345 GCAGCAAATTATTTAGTAGCAAAGTAG 57.774 33.333 0.00 0.00 0.00 2.57
154 155 8.735315 TGCAGCAAATTATTTAGTAGCAAAGTA 58.265 29.630 0.00 0.00 0.00 2.24
155 156 7.601856 TGCAGCAAATTATTTAGTAGCAAAGT 58.398 30.769 0.00 0.00 0.00 2.66
156 157 7.970061 TCTGCAGCAAATTATTTAGTAGCAAAG 59.030 33.333 9.47 0.88 0.00 2.77
157 158 7.825681 TCTGCAGCAAATTATTTAGTAGCAAA 58.174 30.769 9.47 0.00 0.00 3.68
158 159 7.389803 TCTGCAGCAAATTATTTAGTAGCAA 57.610 32.000 9.47 0.00 0.00 3.91
159 160 7.572523 ATCTGCAGCAAATTATTTAGTAGCA 57.427 32.000 9.47 0.00 0.00 3.49
170 171 9.135189 TGGATAACTTAATATCTGCAGCAAATT 57.865 29.630 9.47 10.61 33.63 1.82
171 172 8.696043 TGGATAACTTAATATCTGCAGCAAAT 57.304 30.769 9.47 0.00 33.63 2.32
172 173 7.229306 CCTGGATAACTTAATATCTGCAGCAAA 59.771 37.037 9.47 0.00 33.63 3.68
173 174 6.712095 CCTGGATAACTTAATATCTGCAGCAA 59.288 38.462 9.47 0.00 33.63 3.91
174 175 6.183361 ACCTGGATAACTTAATATCTGCAGCA 60.183 38.462 9.47 0.00 33.63 4.41
175 176 6.148480 CACCTGGATAACTTAATATCTGCAGC 59.852 42.308 9.47 0.00 33.63 5.25
176 177 7.172190 CACACCTGGATAACTTAATATCTGCAG 59.828 40.741 7.63 7.63 33.63 4.41
177 178 6.992123 CACACCTGGATAACTTAATATCTGCA 59.008 38.462 0.00 0.00 33.63 4.41
178 179 6.428159 CCACACCTGGATAACTTAATATCTGC 59.572 42.308 0.00 0.00 40.55 4.26
179 180 7.509546 ACCACACCTGGATAACTTAATATCTG 58.490 38.462 0.00 0.00 40.55 2.90
180 181 7.691993 ACCACACCTGGATAACTTAATATCT 57.308 36.000 0.00 0.00 40.55 1.98
181 182 7.990886 TCAACCACACCTGGATAACTTAATATC 59.009 37.037 0.00 0.00 40.55 1.63
182 183 7.867921 TCAACCACACCTGGATAACTTAATAT 58.132 34.615 0.00 0.00 40.55 1.28
183 184 7.260387 TCAACCACACCTGGATAACTTAATA 57.740 36.000 0.00 0.00 40.55 0.98
184 185 6.134535 TCAACCACACCTGGATAACTTAAT 57.865 37.500 0.00 0.00 40.55 1.40
185 186 5.570205 TCAACCACACCTGGATAACTTAA 57.430 39.130 0.00 0.00 40.55 1.85
186 187 5.570205 TTCAACCACACCTGGATAACTTA 57.430 39.130 0.00 0.00 40.55 2.24
187 188 4.447138 TTCAACCACACCTGGATAACTT 57.553 40.909 0.00 0.00 40.55 2.66
188 189 4.657814 ATTCAACCACACCTGGATAACT 57.342 40.909 0.00 0.00 40.55 2.24
189 190 4.764823 TCAATTCAACCACACCTGGATAAC 59.235 41.667 0.00 0.00 40.55 1.89
190 191 4.764823 GTCAATTCAACCACACCTGGATAA 59.235 41.667 0.00 0.00 40.55 1.75
191 192 4.202514 TGTCAATTCAACCACACCTGGATA 60.203 41.667 0.00 0.00 40.55 2.59
192 193 3.157087 GTCAATTCAACCACACCTGGAT 58.843 45.455 0.00 0.00 40.55 3.41
193 194 2.092158 TGTCAATTCAACCACACCTGGA 60.092 45.455 0.00 0.00 40.55 3.86
194 195 2.305928 TGTCAATTCAACCACACCTGG 58.694 47.619 0.00 0.00 44.26 4.45
195 196 3.381272 AGTTGTCAATTCAACCACACCTG 59.619 43.478 6.44 0.00 45.90 4.00
196 197 3.631250 AGTTGTCAATTCAACCACACCT 58.369 40.909 6.44 0.00 45.90 4.00
197 198 3.380004 TGAGTTGTCAATTCAACCACACC 59.620 43.478 8.22 0.00 45.90 4.16
198 199 4.630894 TGAGTTGTCAATTCAACCACAC 57.369 40.909 8.22 0.00 45.90 3.82
199 200 4.992688 GTTGAGTTGTCAATTCAACCACA 58.007 39.130 29.81 8.46 46.35 4.17
204 205 6.691754 TTAGCAGTTGAGTTGTCAATTCAA 57.308 33.333 16.95 16.95 44.58 2.69
205 206 6.882610 ATTAGCAGTTGAGTTGTCAATTCA 57.117 33.333 6.67 6.67 44.58 2.57
206 207 8.034058 AGTATTAGCAGTTGAGTTGTCAATTC 57.966 34.615 1.25 1.25 44.58 2.17
207 208 7.986085 AGTATTAGCAGTTGAGTTGTCAATT 57.014 32.000 0.00 0.00 44.58 2.32
208 209 7.661437 TCAAGTATTAGCAGTTGAGTTGTCAAT 59.339 33.333 0.00 0.00 44.58 2.57
209 210 6.989759 TCAAGTATTAGCAGTTGAGTTGTCAA 59.010 34.615 0.00 0.00 40.55 3.18
210 211 6.521162 TCAAGTATTAGCAGTTGAGTTGTCA 58.479 36.000 0.00 0.00 33.85 3.58
211 212 7.054855 CTCAAGTATTAGCAGTTGAGTTGTC 57.945 40.000 11.00 0.00 45.15 3.18
241 242 1.408969 GACACAAGGGGAGCCAAAAA 58.591 50.000 0.00 0.00 0.00 1.94
242 243 0.821711 CGACACAAGGGGAGCCAAAA 60.822 55.000 0.00 0.00 0.00 2.44
243 244 1.228124 CGACACAAGGGGAGCCAAA 60.228 57.895 0.00 0.00 0.00 3.28
244 245 1.701031 TTCGACACAAGGGGAGCCAA 61.701 55.000 0.00 0.00 0.00 4.52
245 246 1.488705 ATTCGACACAAGGGGAGCCA 61.489 55.000 0.00 0.00 0.00 4.75
246 247 0.744771 GATTCGACACAAGGGGAGCC 60.745 60.000 0.00 0.00 0.00 4.70
247 248 0.036388 TGATTCGACACAAGGGGAGC 60.036 55.000 0.00 0.00 0.00 4.70
248 249 2.472695 TTGATTCGACACAAGGGGAG 57.527 50.000 0.00 0.00 0.00 4.30
249 250 4.561500 TTATTGATTCGACACAAGGGGA 57.438 40.909 8.90 0.00 0.00 4.81
250 251 5.835113 ATTTATTGATTCGACACAAGGGG 57.165 39.130 8.90 0.00 0.00 4.79
251 252 6.531240 CCAAATTTATTGATTCGACACAAGGG 59.469 38.462 8.90 0.00 0.00 3.95
252 253 6.531240 CCCAAATTTATTGATTCGACACAAGG 59.469 38.462 8.90 3.91 0.00 3.61
253 254 7.090173 ACCCAAATTTATTGATTCGACACAAG 58.910 34.615 8.90 0.00 0.00 3.16
254 255 6.987386 ACCCAAATTTATTGATTCGACACAA 58.013 32.000 6.03 6.03 0.00 3.33
255 256 6.582677 ACCCAAATTTATTGATTCGACACA 57.417 33.333 0.00 0.00 0.00 3.72
256 257 7.087639 TCAACCCAAATTTATTGATTCGACAC 58.912 34.615 7.33 0.00 0.00 3.67
257 258 7.220741 TCAACCCAAATTTATTGATTCGACA 57.779 32.000 7.33 0.00 0.00 4.35
258 259 8.702163 ATTCAACCCAAATTTATTGATTCGAC 57.298 30.769 10.73 0.00 31.45 4.20
259 260 9.796120 GTATTCAACCCAAATTTATTGATTCGA 57.204 29.630 10.73 0.00 31.45 3.71
260 261 9.801873 AGTATTCAACCCAAATTTATTGATTCG 57.198 29.630 10.73 0.00 31.45 3.34
276 277 4.996788 TTCGAGGGTAGAGTATTCAACC 57.003 45.455 0.00 0.00 0.00 3.77
277 278 6.310711 CAGTTTTCGAGGGTAGAGTATTCAAC 59.689 42.308 0.00 0.00 0.00 3.18
278 279 6.014840 ACAGTTTTCGAGGGTAGAGTATTCAA 60.015 38.462 0.00 0.00 0.00 2.69
279 280 5.479375 ACAGTTTTCGAGGGTAGAGTATTCA 59.521 40.000 0.00 0.00 0.00 2.57
280 281 5.963594 ACAGTTTTCGAGGGTAGAGTATTC 58.036 41.667 0.00 0.00 0.00 1.75
281 282 5.997384 ACAGTTTTCGAGGGTAGAGTATT 57.003 39.130 0.00 0.00 0.00 1.89
282 283 5.997384 AACAGTTTTCGAGGGTAGAGTAT 57.003 39.130 0.00 0.00 0.00 2.12
283 284 5.776744 GAAACAGTTTTCGAGGGTAGAGTA 58.223 41.667 0.00 0.00 32.08 2.59
284 285 4.629092 GAAACAGTTTTCGAGGGTAGAGT 58.371 43.478 0.00 0.00 32.08 3.24
295 296 8.596380 CAAGTATAGAGGATCGAAACAGTTTTC 58.404 37.037 0.00 0.00 42.67 2.29
296 297 8.095169 ACAAGTATAGAGGATCGAAACAGTTTT 58.905 33.333 0.00 0.00 42.67 2.43
297 298 7.545965 CACAAGTATAGAGGATCGAAACAGTTT 59.454 37.037 0.00 0.00 42.67 2.66
298 299 7.036220 CACAAGTATAGAGGATCGAAACAGTT 58.964 38.462 0.00 0.00 42.67 3.16
299 300 6.405953 CCACAAGTATAGAGGATCGAAACAGT 60.406 42.308 0.00 0.00 42.67 3.55
300 301 5.980116 CCACAAGTATAGAGGATCGAAACAG 59.020 44.000 0.00 0.00 42.67 3.16
301 302 5.163447 CCCACAAGTATAGAGGATCGAAACA 60.163 44.000 0.00 0.00 42.67 2.83
302 303 5.163437 ACCCACAAGTATAGAGGATCGAAAC 60.163 44.000 0.00 0.00 42.67 2.78
303 304 4.960469 ACCCACAAGTATAGAGGATCGAAA 59.040 41.667 0.00 0.00 42.67 3.46
304 305 4.543689 ACCCACAAGTATAGAGGATCGAA 58.456 43.478 0.00 0.00 42.67 3.71
305 306 4.180377 ACCCACAAGTATAGAGGATCGA 57.820 45.455 0.00 0.00 42.67 3.59
306 307 4.939052 AACCCACAAGTATAGAGGATCG 57.061 45.455 0.00 0.00 42.67 3.69
307 308 7.451877 TCTGATAACCCACAAGTATAGAGGATC 59.548 40.741 0.00 0.00 0.00 3.36
308 309 7.233757 GTCTGATAACCCACAAGTATAGAGGAT 59.766 40.741 0.00 0.00 0.00 3.24
309 310 6.550108 GTCTGATAACCCACAAGTATAGAGGA 59.450 42.308 0.00 0.00 0.00 3.71
310 311 6.515200 CGTCTGATAACCCACAAGTATAGAGG 60.515 46.154 0.00 0.00 0.00 3.69
311 312 6.039493 ACGTCTGATAACCCACAAGTATAGAG 59.961 42.308 0.00 0.00 0.00 2.43
312 313 5.889853 ACGTCTGATAACCCACAAGTATAGA 59.110 40.000 0.00 0.00 0.00 1.98
313 314 6.039493 AGACGTCTGATAACCCACAAGTATAG 59.961 42.308 19.30 0.00 0.00 1.31
314 315 5.889853 AGACGTCTGATAACCCACAAGTATA 59.110 40.000 19.30 0.00 0.00 1.47
315 316 4.710375 AGACGTCTGATAACCCACAAGTAT 59.290 41.667 19.30 0.00 0.00 2.12
316 317 4.082408 CAGACGTCTGATAACCCACAAGTA 60.082 45.833 36.73 0.00 46.59 2.24
317 318 2.897969 AGACGTCTGATAACCCACAAGT 59.102 45.455 19.30 0.00 0.00 3.16
318 319 3.254060 CAGACGTCTGATAACCCACAAG 58.746 50.000 36.73 7.99 46.59 3.16
319 320 2.028476 CCAGACGTCTGATAACCCACAA 60.028 50.000 40.21 0.00 46.59 3.33
320 321 1.548719 CCAGACGTCTGATAACCCACA 59.451 52.381 40.21 0.00 46.59 4.17
321 322 1.822990 TCCAGACGTCTGATAACCCAC 59.177 52.381 40.21 0.27 46.59 4.61
322 323 1.822990 GTCCAGACGTCTGATAACCCA 59.177 52.381 40.21 15.83 46.59 4.51
323 324 2.580966 GTCCAGACGTCTGATAACCC 57.419 55.000 40.21 19.66 46.59 4.11
403 405 0.885196 TTAAACCGCCTGCAACCATC 59.115 50.000 0.00 0.00 0.00 3.51
406 408 0.038618 CCTTTAAACCGCCTGCAACC 60.039 55.000 0.00 0.00 0.00 3.77
437 439 7.615365 TCCTGCAAATCAATCTTTAGGTACATT 59.385 33.333 0.00 0.00 0.00 2.71
572 582 7.070447 TGCAAATGGGCTCCATATTTTATACAA 59.930 33.333 7.09 0.00 44.40 2.41
573 583 6.552725 TGCAAATGGGCTCCATATTTTATACA 59.447 34.615 7.09 0.00 44.40 2.29
582 592 1.102809 CGCTGCAAATGGGCTCCATA 61.103 55.000 7.09 0.00 44.40 2.74
584 594 2.842188 ATCGCTGCAAATGGGCTCCA 62.842 55.000 0.00 0.00 38.19 3.86
600 610 2.649331 ACAGGACTTACGGAACATCG 57.351 50.000 0.00 0.00 0.00 3.84
601 611 6.980051 ATAAAACAGGACTTACGGAACATC 57.020 37.500 0.00 0.00 0.00 3.06
603 613 8.851541 ATAAATAAAACAGGACTTACGGAACA 57.148 30.769 0.00 0.00 0.00 3.18
806 829 9.585099 AATACGTACGTAATCAAACTAATCCAA 57.415 29.630 29.91 5.14 33.99 3.53
818 841 8.947940 ACAATCGAAAGTAATACGTACGTAATC 58.052 33.333 29.91 21.31 37.81 1.75
828 851 8.882415 TCCTATTCCACAATCGAAAGTAATAC 57.118 34.615 0.00 0.00 0.00 1.89
829 852 9.893634 TTTCCTATTCCACAATCGAAAGTAATA 57.106 29.630 0.00 0.00 0.00 0.98
830 853 8.801882 TTTCCTATTCCACAATCGAAAGTAAT 57.198 30.769 0.00 0.00 0.00 1.89
831 854 8.673711 CATTTCCTATTCCACAATCGAAAGTAA 58.326 33.333 0.00 0.00 30.00 2.24
838 861 6.293626 GGTCATCATTTCCTATTCCACAATCG 60.294 42.308 0.00 0.00 0.00 3.34
888 911 4.164981 ACCAAATACGATGGGCTCCTATA 58.835 43.478 0.00 0.00 42.48 1.31
930 953 3.694072 CCAAATGAAAAGGATAGACGGCA 59.306 43.478 0.00 0.00 0.00 5.69
969 996 6.215636 AGTTGCTTGGGGGAGTATATATAAGG 59.784 42.308 0.00 0.00 0.00 2.69
981 1009 0.039618 GGATGAAGTTGCTTGGGGGA 59.960 55.000 0.00 0.00 0.00 4.81
987 1015 1.002430 TGAGAGCGGATGAAGTTGCTT 59.998 47.619 0.00 0.00 37.91 3.91
999 1027 0.662619 TTGTTTGCTTGTGAGAGCGG 59.337 50.000 0.00 0.00 45.64 5.52
1030 1058 8.002459 AGAAGTTTGTAAAGTTTGGGAGGATTA 58.998 33.333 0.00 0.00 32.00 1.75
1031 1059 6.839134 AGAAGTTTGTAAAGTTTGGGAGGATT 59.161 34.615 0.00 0.00 32.00 3.01
1032 1060 6.373759 AGAAGTTTGTAAAGTTTGGGAGGAT 58.626 36.000 0.00 0.00 32.00 3.24
1033 1061 5.762279 AGAAGTTTGTAAAGTTTGGGAGGA 58.238 37.500 0.00 0.00 32.00 3.71
1061 1089 3.253921 TGTGTGCTACTGCTCTACGTAAA 59.746 43.478 0.00 0.00 40.48 2.01
1069 1097 1.734465 GGACATTGTGTGCTACTGCTC 59.266 52.381 0.00 0.00 35.71 4.26
1626 1663 9.737427 CTAGCACGTAGTAGTAAACTAGTAGTA 57.263 37.037 2.50 0.00 41.61 1.82
1627 1664 7.223777 GCTAGCACGTAGTAGTAAACTAGTAGT 59.776 40.741 10.63 0.00 41.61 2.73
1628 1665 7.437862 AGCTAGCACGTAGTAGTAAACTAGTAG 59.562 40.741 18.83 0.00 41.61 2.57
1629 1666 7.268586 AGCTAGCACGTAGTAGTAAACTAGTA 58.731 38.462 18.83 1.35 41.61 1.82
1630 1667 6.112058 AGCTAGCACGTAGTAGTAAACTAGT 58.888 40.000 18.83 3.15 41.61 2.57
1631 1668 6.601741 AGCTAGCACGTAGTAGTAAACTAG 57.398 41.667 18.83 0.00 41.61 2.57
1632 1669 9.935241 ATATAGCTAGCACGTAGTAGTAAACTA 57.065 33.333 18.83 0.00 41.61 2.24
1633 1670 8.719648 CATATAGCTAGCACGTAGTAGTAAACT 58.280 37.037 18.83 0.00 41.61 2.66
1634 1671 8.502387 ACATATAGCTAGCACGTAGTAGTAAAC 58.498 37.037 18.83 0.00 41.61 2.01
1635 1672 8.613060 ACATATAGCTAGCACGTAGTAGTAAA 57.387 34.615 18.83 0.00 41.61 2.01
1636 1673 9.144747 GTACATATAGCTAGCACGTAGTAGTAA 57.855 37.037 18.83 0.00 41.61 2.24
1695 1954 3.084786 ACAGATTAGCTTTGCCTCCAAC 58.915 45.455 0.00 0.00 0.00 3.77
1759 2024 4.151867 GGAGACGTTGCTTACAAAAGGTAG 59.848 45.833 0.00 0.00 37.58 3.18
2144 2412 6.486056 TGGATGCTTACCATTTTAACCACTA 58.514 36.000 0.00 0.00 33.29 2.74
2430 2769 4.495422 ACCACAGATTAGTTCGTGATGAC 58.505 43.478 0.00 0.00 33.50 3.06
2433 2772 4.020573 TCCAACCACAGATTAGTTCGTGAT 60.021 41.667 0.00 0.00 33.50 3.06
2537 2876 2.360350 CTGGGCTGGCACATCGTT 60.360 61.111 2.88 0.00 38.20 3.85
2548 2887 1.065564 GCATCTTTGAGAGACTGGGCT 60.066 52.381 0.00 0.00 37.17 5.19
2551 2890 3.260740 GTGAGCATCTTTGAGAGACTGG 58.739 50.000 0.00 0.00 37.17 4.00
2604 2943 6.496911 AGGCCATGTACACATATATACTCACA 59.503 38.462 5.01 0.00 34.26 3.58
2611 2950 6.392911 AATGGAGGCCATGTACACATATAT 57.607 37.500 5.01 0.00 44.40 0.86
2624 2963 1.705186 GGGAGCTATAAATGGAGGCCA 59.295 52.381 5.01 0.00 38.19 5.36
2625 2964 1.988846 AGGGAGCTATAAATGGAGGCC 59.011 52.381 0.00 0.00 0.00 5.19
2626 2965 3.073062 TGAAGGGAGCTATAAATGGAGGC 59.927 47.826 0.00 0.00 0.00 4.70
2627 2966 4.594920 TCTGAAGGGAGCTATAAATGGAGG 59.405 45.833 0.00 0.00 0.00 4.30
2628 2967 5.792741 CTCTGAAGGGAGCTATAAATGGAG 58.207 45.833 0.00 0.00 0.00 3.86
2629 2968 5.815233 CTCTGAAGGGAGCTATAAATGGA 57.185 43.478 0.00 0.00 0.00 3.41
2640 2979 2.297033 GCTAGAGATGCTCTGAAGGGAG 59.703 54.545 7.19 0.00 41.37 4.30
2641 2980 2.315176 GCTAGAGATGCTCTGAAGGGA 58.685 52.381 7.19 0.00 41.37 4.20
2642 2981 2.036217 CTGCTAGAGATGCTCTGAAGGG 59.964 54.545 7.19 0.00 41.37 3.95
2643 2982 2.957680 TCTGCTAGAGATGCTCTGAAGG 59.042 50.000 7.19 0.00 41.37 3.46
2644 2983 3.243501 GGTCTGCTAGAGATGCTCTGAAG 60.244 52.174 7.19 0.00 41.37 3.02
2645 2984 2.692557 GGTCTGCTAGAGATGCTCTGAA 59.307 50.000 7.19 0.00 41.37 3.02
2646 2985 2.305928 GGTCTGCTAGAGATGCTCTGA 58.694 52.381 7.19 0.00 41.37 3.27
2647 2986 1.340889 GGGTCTGCTAGAGATGCTCTG 59.659 57.143 7.19 0.00 41.37 3.35
2648 2987 1.703411 GGGTCTGCTAGAGATGCTCT 58.297 55.000 0.00 2.22 43.83 4.09
2649 2988 0.678950 GGGGTCTGCTAGAGATGCTC 59.321 60.000 0.00 0.00 31.63 4.26
2650 2989 0.264359 AGGGGTCTGCTAGAGATGCT 59.736 55.000 0.00 0.00 31.63 3.79
2651 2990 1.127343 AAGGGGTCTGCTAGAGATGC 58.873 55.000 0.00 0.00 31.63 3.91
2652 2991 5.362430 GGATATAAGGGGTCTGCTAGAGATG 59.638 48.000 0.00 0.00 31.63 2.90
2653 2992 5.524535 GGATATAAGGGGTCTGCTAGAGAT 58.475 45.833 0.00 0.00 31.63 2.75
2654 2993 4.264442 GGGATATAAGGGGTCTGCTAGAGA 60.264 50.000 0.00 0.00 0.00 3.10
2655 2994 4.027437 GGGATATAAGGGGTCTGCTAGAG 58.973 52.174 0.00 0.00 0.00 2.43
2656 2995 3.404769 TGGGATATAAGGGGTCTGCTAGA 59.595 47.826 0.00 0.00 0.00 2.43
2657 2996 3.515901 GTGGGATATAAGGGGTCTGCTAG 59.484 52.174 0.00 0.00 0.00 3.42
2658 2997 3.144125 AGTGGGATATAAGGGGTCTGCTA 59.856 47.826 0.00 0.00 0.00 3.49
2659 2998 2.089925 AGTGGGATATAAGGGGTCTGCT 60.090 50.000 0.00 0.00 0.00 4.24
2660 2999 2.039084 CAGTGGGATATAAGGGGTCTGC 59.961 54.545 0.00 0.00 0.00 4.26
2661 3000 3.587498 TCAGTGGGATATAAGGGGTCTG 58.413 50.000 0.00 0.00 0.00 3.51
2662 3001 3.974642 GTTCAGTGGGATATAAGGGGTCT 59.025 47.826 0.00 0.00 0.00 3.85
2663 3002 3.974642 AGTTCAGTGGGATATAAGGGGTC 59.025 47.826 0.00 0.00 0.00 4.46
2664 3003 3.716872 CAGTTCAGTGGGATATAAGGGGT 59.283 47.826 0.00 0.00 0.00 4.95
2665 3004 3.716872 ACAGTTCAGTGGGATATAAGGGG 59.283 47.826 0.00 0.00 0.00 4.79
2666 3005 6.494666 TTACAGTTCAGTGGGATATAAGGG 57.505 41.667 0.00 0.00 0.00 3.95
2667 3006 8.980481 ATTTTACAGTTCAGTGGGATATAAGG 57.020 34.615 0.00 0.00 0.00 2.69
2670 3009 9.841295 GGTTATTTTACAGTTCAGTGGGATATA 57.159 33.333 0.00 0.00 0.00 0.86
2671 3010 8.333235 TGGTTATTTTACAGTTCAGTGGGATAT 58.667 33.333 0.00 0.00 0.00 1.63
2672 3011 7.691213 TGGTTATTTTACAGTTCAGTGGGATA 58.309 34.615 0.00 0.00 0.00 2.59
2673 3012 6.548321 TGGTTATTTTACAGTTCAGTGGGAT 58.452 36.000 0.00 0.00 0.00 3.85
2674 3013 5.942961 TGGTTATTTTACAGTTCAGTGGGA 58.057 37.500 0.00 0.00 0.00 4.37
2675 3014 6.432783 TGATGGTTATTTTACAGTTCAGTGGG 59.567 38.462 0.00 0.00 0.00 4.61
2676 3015 7.174946 ACTGATGGTTATTTTACAGTTCAGTGG 59.825 37.037 0.00 0.00 35.52 4.00
2677 3016 8.099364 ACTGATGGTTATTTTACAGTTCAGTG 57.901 34.615 0.00 0.00 35.52 3.66
2678 3017 8.691661 AACTGATGGTTATTTTACAGTTCAGT 57.308 30.769 0.00 0.00 42.30 3.41
2679 3018 9.965824 AAAACTGATGGTTATTTTACAGTTCAG 57.034 29.630 0.00 0.00 44.17 3.02
2680 3019 9.959749 GAAAACTGATGGTTATTTTACAGTTCA 57.040 29.630 0.00 0.00 44.17 3.18
2681 3020 9.959749 TGAAAACTGATGGTTATTTTACAGTTC 57.040 29.630 0.00 0.00 44.17 3.01
2688 3027 8.987890 CCGAAATTGAAAACTGATGGTTATTTT 58.012 29.630 0.00 0.00 37.12 1.82
2689 3028 8.364142 TCCGAAATTGAAAACTGATGGTTATTT 58.636 29.630 0.00 0.00 37.12 1.40
2690 3029 7.812669 GTCCGAAATTGAAAACTGATGGTTATT 59.187 33.333 0.00 0.00 37.12 1.40
2691 3030 7.312899 GTCCGAAATTGAAAACTGATGGTTAT 58.687 34.615 0.00 0.00 37.12 1.89
2692 3031 6.566942 CGTCCGAAATTGAAAACTGATGGTTA 60.567 38.462 0.00 0.00 37.12 2.85
2693 3032 5.528870 GTCCGAAATTGAAAACTGATGGTT 58.471 37.500 0.00 0.00 40.28 3.67
2694 3033 4.320202 CGTCCGAAATTGAAAACTGATGGT 60.320 41.667 0.00 0.00 0.00 3.55
2695 3034 4.158384 CGTCCGAAATTGAAAACTGATGG 58.842 43.478 0.00 0.00 0.00 3.51
2696 3035 4.083537 TCCGTCCGAAATTGAAAACTGATG 60.084 41.667 0.00 0.00 0.00 3.07
2697 3036 4.069304 TCCGTCCGAAATTGAAAACTGAT 58.931 39.130 0.00 0.00 0.00 2.90
2698 3037 3.468770 TCCGTCCGAAATTGAAAACTGA 58.531 40.909 0.00 0.00 0.00 3.41
2699 3038 3.889196 TCCGTCCGAAATTGAAAACTG 57.111 42.857 0.00 0.00 0.00 3.16
2700 3039 4.904253 TTTCCGTCCGAAATTGAAAACT 57.096 36.364 0.00 0.00 35.49 2.66
2701 3040 5.517411 ACTTTTTCCGTCCGAAATTGAAAAC 59.483 36.000 0.00 0.00 40.18 2.43
2702 3041 5.652518 ACTTTTTCCGTCCGAAATTGAAAA 58.347 33.333 0.00 0.00 40.18 2.29
2703 3042 5.251601 ACTTTTTCCGTCCGAAATTGAAA 57.748 34.783 0.00 0.00 40.18 2.69
2704 3043 4.904253 ACTTTTTCCGTCCGAAATTGAA 57.096 36.364 0.00 0.00 40.18 2.69
2705 3044 4.453136 CCTACTTTTTCCGTCCGAAATTGA 59.547 41.667 0.00 0.00 40.18 2.57
2706 3045 4.719040 CCTACTTTTTCCGTCCGAAATTG 58.281 43.478 0.00 0.00 40.18 2.32
2707 3046 3.189910 GCCTACTTTTTCCGTCCGAAATT 59.810 43.478 0.00 0.00 40.18 1.82
2708 3047 2.745821 GCCTACTTTTTCCGTCCGAAAT 59.254 45.455 0.00 0.00 40.18 2.17
2709 3048 2.145536 GCCTACTTTTTCCGTCCGAAA 58.854 47.619 0.00 0.00 38.74 3.46
2710 3049 1.608801 GGCCTACTTTTTCCGTCCGAA 60.609 52.381 0.00 0.00 0.00 4.30
2711 3050 0.037046 GGCCTACTTTTTCCGTCCGA 60.037 55.000 0.00 0.00 0.00 4.55
2712 3051 1.356527 CGGCCTACTTTTTCCGTCCG 61.357 60.000 0.00 0.00 37.33 4.79
2713 3052 0.037046 TCGGCCTACTTTTTCCGTCC 60.037 55.000 0.00 0.00 42.28 4.79
2714 3053 1.462283 GTTCGGCCTACTTTTTCCGTC 59.538 52.381 0.00 0.00 42.28 4.79
2715 3054 1.202675 TGTTCGGCCTACTTTTTCCGT 60.203 47.619 0.00 0.00 42.28 4.69
2716 3055 1.463444 CTGTTCGGCCTACTTTTTCCG 59.537 52.381 0.00 0.00 42.96 4.30
2717 3056 2.483106 GTCTGTTCGGCCTACTTTTTCC 59.517 50.000 0.00 0.00 0.00 3.13
2718 3057 3.059120 GTGTCTGTTCGGCCTACTTTTTC 60.059 47.826 0.00 0.00 0.00 2.29
2719 3058 2.876550 GTGTCTGTTCGGCCTACTTTTT 59.123 45.455 0.00 0.00 0.00 1.94
2720 3059 2.158871 TGTGTCTGTTCGGCCTACTTTT 60.159 45.455 0.00 0.00 0.00 2.27
2721 3060 1.414919 TGTGTCTGTTCGGCCTACTTT 59.585 47.619 0.00 0.00 0.00 2.66
2722 3061 1.045407 TGTGTCTGTTCGGCCTACTT 58.955 50.000 0.00 0.00 0.00 2.24
2723 3062 1.267121 ATGTGTCTGTTCGGCCTACT 58.733 50.000 0.00 0.00 0.00 2.57
2724 3063 2.094762 AATGTGTCTGTTCGGCCTAC 57.905 50.000 0.00 0.00 0.00 3.18
2725 3064 2.851263 AAATGTGTCTGTTCGGCCTA 57.149 45.000 0.00 0.00 0.00 3.93
2726 3065 1.981256 AAAATGTGTCTGTTCGGCCT 58.019 45.000 0.00 0.00 0.00 5.19
2727 3066 2.550606 TGTAAAATGTGTCTGTTCGGCC 59.449 45.455 0.00 0.00 0.00 6.13
2728 3067 3.551551 GTGTAAAATGTGTCTGTTCGGC 58.448 45.455 0.00 0.00 0.00 5.54
2729 3068 3.813166 AGGTGTAAAATGTGTCTGTTCGG 59.187 43.478 0.00 0.00 0.00 4.30
2730 3069 5.418310 AAGGTGTAAAATGTGTCTGTTCG 57.582 39.130 0.00 0.00 0.00 3.95
2731 3070 5.235616 TCGAAGGTGTAAAATGTGTCTGTTC 59.764 40.000 0.00 0.00 0.00 3.18
2732 3071 5.007332 GTCGAAGGTGTAAAATGTGTCTGTT 59.993 40.000 0.00 0.00 0.00 3.16
2733 3072 4.510340 GTCGAAGGTGTAAAATGTGTCTGT 59.490 41.667 0.00 0.00 0.00 3.41
2734 3073 4.084013 GGTCGAAGGTGTAAAATGTGTCTG 60.084 45.833 0.00 0.00 0.00 3.51
2735 3074 4.062991 GGTCGAAGGTGTAAAATGTGTCT 58.937 43.478 0.00 0.00 0.00 3.41
2736 3075 4.062991 AGGTCGAAGGTGTAAAATGTGTC 58.937 43.478 0.00 0.00 0.00 3.67
2737 3076 4.081322 AGGTCGAAGGTGTAAAATGTGT 57.919 40.909 0.00 0.00 0.00 3.72


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.