Multiple sequence alignment - TraesCS5D01G316100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G316100 chr5D 100.000 3458 0 0 1 3458 410074582 410078039 0.000000e+00 6386
1 TraesCS5D01G316100 chr5D 82.803 628 77 17 2340 2942 419759648 419760269 1.830000e-147 532
2 TraesCS5D01G316100 chr5D 86.907 443 44 6 2961 3397 419759855 419760289 5.190000e-133 484
3 TraesCS5D01G316100 chr5B 92.507 2282 113 27 530 2784 491878916 491881166 0.000000e+00 3214
4 TraesCS5D01G316100 chr5B 78.619 1202 223 27 1185 2378 491952544 491953719 0.000000e+00 765
5 TraesCS5D01G316100 chr5B 90.944 519 33 8 1 514 491878081 491878590 0.000000e+00 686
6 TraesCS5D01G316100 chr5B 84.661 339 26 7 2991 3323 491880944 491881262 7.200000e-82 315
7 TraesCS5D01G316100 chr5A 92.482 2248 108 27 533 2767 521357798 521359997 0.000000e+00 3158
8 TraesCS5D01G316100 chr5A 76.446 1435 284 42 997 2404 521696497 521697904 0.000000e+00 728
9 TraesCS5D01G316100 chr5A 88.034 351 20 9 171 505 521357385 521357729 2.500000e-106 396
10 TraesCS5D01G316100 chr5A 87.826 230 8 6 2976 3202 521359785 521359997 5.730000e-63 252


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G316100 chr5D 410074582 410078039 3457 False 6386.000000 6386 100.000000 1 3458 1 chr5D.!!$F1 3457
1 TraesCS5D01G316100 chr5D 419759648 419760289 641 False 508.000000 532 84.855000 2340 3397 2 chr5D.!!$F2 1057
2 TraesCS5D01G316100 chr5B 491878081 491881262 3181 False 1405.000000 3214 89.370667 1 3323 3 chr5B.!!$F2 3322
3 TraesCS5D01G316100 chr5B 491952544 491953719 1175 False 765.000000 765 78.619000 1185 2378 1 chr5B.!!$F1 1193
4 TraesCS5D01G316100 chr5A 521357385 521359997 2612 False 1268.666667 3158 89.447333 171 3202 3 chr5A.!!$F2 3031
5 TraesCS5D01G316100 chr5A 521696497 521697904 1407 False 728.000000 728 76.446000 997 2404 1 chr5A.!!$F1 1407

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
708 1046 0.032678 CCGGATCGATCTTGTCCCTG 59.967 60.0 23.96 2.76 0.00 4.45 F
1752 2109 0.106708 TCAACTGCTTCTTCCGCACT 59.893 50.0 0.00 0.00 33.19 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2046 2403 0.036388 CGCCTTGGACCTTCTTGCTA 60.036 55.0 0.0 0.0 0.0 3.49 R
2874 3257 0.039346 TCGTGTATCGTGTCCGCAAA 60.039 50.0 0.0 0.0 40.8 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
68 69 9.950680 TCAATGAGAAACTGAAATAGTGAAAAC 57.049 29.630 0.00 0.00 40.26 2.43
69 70 9.956720 CAATGAGAAACTGAAATAGTGAAAACT 57.043 29.630 0.00 0.00 40.26 2.66
83 84 6.190954 AGTGAAAACTAAACAACTTTCGCT 57.809 33.333 4.16 4.16 41.45 4.93
90 91 8.767478 AAACTAAACAACTTTCGCTAGCTATA 57.233 30.769 13.93 0.00 0.00 1.31
91 92 8.943909 AACTAAACAACTTTCGCTAGCTATAT 57.056 30.769 13.93 0.00 0.00 0.86
92 93 8.354011 ACTAAACAACTTTCGCTAGCTATATG 57.646 34.615 13.93 6.83 0.00 1.78
95 96 4.101119 ACAACTTTCGCTAGCTATATGGGT 59.899 41.667 13.93 0.91 0.00 4.51
96 97 4.522722 ACTTTCGCTAGCTATATGGGTC 57.477 45.455 13.93 0.00 0.00 4.46
97 98 4.153411 ACTTTCGCTAGCTATATGGGTCT 58.847 43.478 13.93 0.00 0.00 3.85
129 130 0.614812 ATCCAGGGTTTGCAAATGCC 59.385 50.000 16.21 12.56 41.18 4.40
141 142 2.025863 GCAAATGCCACCCTAGCTGAT 61.026 52.381 0.00 0.00 34.31 2.90
179 180 2.895039 GTGTCCACACCACACGTAG 58.105 57.895 0.00 0.00 40.85 3.51
189 190 1.071699 ACCACACGTAGAAGGTTGCAT 59.928 47.619 0.00 0.00 0.00 3.96
291 296 1.075896 CCCCTCCCTCTCGTTAGCT 60.076 63.158 0.00 0.00 0.00 3.32
308 313 1.344942 GCTTGTCGACACTGTAGCCG 61.345 60.000 23.37 6.00 0.00 5.52
309 314 0.240145 CTTGTCGACACTGTAGCCGA 59.760 55.000 19.90 0.00 0.00 5.54
328 337 0.320374 AAGCCACCGAGTTGAATCGA 59.680 50.000 2.09 0.00 45.56 3.59
505 526 0.302890 CGATCGGCTCTACGTACGTT 59.697 55.000 27.92 10.83 34.94 3.99
506 527 1.522676 CGATCGGCTCTACGTACGTTA 59.477 52.381 27.92 14.22 34.94 3.18
507 528 2.657692 CGATCGGCTCTACGTACGTTAC 60.658 54.545 27.92 13.06 34.94 2.50
622 960 1.734748 GACACTAGAGGGCGGCTAC 59.265 63.158 9.56 3.21 0.00 3.58
624 962 1.756950 CACTAGAGGGCGGCTACCA 60.757 63.158 9.56 0.00 0.00 3.25
637 975 3.703420 CGGCTACCACTACTGTTCATAC 58.297 50.000 0.00 0.00 0.00 2.39
706 1044 1.301009 GCCGGATCGATCTTGTCCC 60.301 63.158 23.96 6.92 0.00 4.46
707 1045 1.749334 GCCGGATCGATCTTGTCCCT 61.749 60.000 23.96 0.00 0.00 4.20
708 1046 0.032678 CCGGATCGATCTTGTCCCTG 59.967 60.000 23.96 2.76 0.00 4.45
806 1144 3.508762 ACACGATCAATCTTGACGTACC 58.491 45.455 15.15 0.00 40.33 3.34
810 1148 4.639310 ACGATCAATCTTGACGTACCTACT 59.361 41.667 14.44 0.00 40.42 2.57
817 1155 4.053295 TCTTGACGTACCTACTTTGCAAC 58.947 43.478 0.00 0.00 0.00 4.17
820 1158 1.340889 ACGTACCTACTTTGCAACGGA 59.659 47.619 7.92 0.00 34.81 4.69
822 1160 2.758009 GTACCTACTTTGCAACGGACA 58.242 47.619 7.92 0.00 0.00 4.02
823 1161 1.589803 ACCTACTTTGCAACGGACAC 58.410 50.000 7.92 0.00 0.00 3.67
824 1162 1.134340 ACCTACTTTGCAACGGACACA 60.134 47.619 7.92 0.00 0.00 3.72
870 1209 1.873903 GCAGACTTGTCACGGTCACAT 60.874 52.381 3.49 0.00 35.18 3.21
871 1210 1.794701 CAGACTTGTCACGGTCACATG 59.205 52.381 3.49 0.00 35.18 3.21
872 1211 1.686587 AGACTTGTCACGGTCACATGA 59.313 47.619 5.10 0.00 35.18 3.07
873 1212 2.061773 GACTTGTCACGGTCACATGAG 58.938 52.381 5.10 0.00 33.19 2.90
874 1213 0.792640 CTTGTCACGGTCACATGAGC 59.207 55.000 0.00 0.86 39.04 4.26
877 1216 1.374631 TCACGGTCACATGAGCTGC 60.375 57.895 0.00 0.00 40.17 5.25
902 1241 2.607282 GGAGACGACGCACCATATAAGG 60.607 54.545 0.00 0.00 0.00 2.69
941 1283 5.475719 GCTACACACATACACTACAGGAAA 58.524 41.667 0.00 0.00 0.00 3.13
942 1284 5.929992 GCTACACACATACACTACAGGAAAA 59.070 40.000 0.00 0.00 0.00 2.29
943 1285 6.594159 GCTACACACATACACTACAGGAAAAT 59.406 38.462 0.00 0.00 0.00 1.82
944 1286 7.201530 GCTACACACATACACTACAGGAAAATC 60.202 40.741 0.00 0.00 0.00 2.17
950 1292 7.550551 CACATACACTACAGGAAAATCATCAGT 59.449 37.037 0.00 0.00 0.00 3.41
954 1296 6.169094 CACTACAGGAAAATCATCAGTGTCT 58.831 40.000 0.00 0.00 0.00 3.41
987 1329 2.417516 TCGCGAGATAAGCAGGCC 59.582 61.111 3.71 0.00 33.31 5.19
989 1331 2.663188 GCGAGATAAGCAGGCCGG 60.663 66.667 0.00 0.00 34.19 6.13
991 1333 2.281139 GAGATAAGCAGGCCGGCC 60.281 66.667 39.29 39.29 0.00 6.13
1646 2003 4.406173 CGTCCTGAGAGCGCACGT 62.406 66.667 11.47 0.00 0.00 4.49
1647 2004 2.807045 GTCCTGAGAGCGCACGTG 60.807 66.667 12.28 12.28 0.00 4.49
1728 2085 3.909086 GAGGGACCGCAGCAAGCTT 62.909 63.158 0.00 0.00 42.61 3.74
1752 2109 0.106708 TCAACTGCTTCTTCCGCACT 59.893 50.000 0.00 0.00 33.19 4.40
1839 2196 2.680913 GCTGAAGCGCACGACCATT 61.681 57.895 11.47 0.00 0.00 3.16
2463 2846 1.026718 CCCCGTTGGCTTGATCTGAC 61.027 60.000 0.00 0.00 0.00 3.51
2486 2869 0.535335 ACGTACCTAGTGCATGGGTG 59.465 55.000 15.36 5.42 43.83 4.61
2487 2870 0.535335 CGTACCTAGTGCATGGGTGT 59.465 55.000 15.36 2.23 43.83 4.16
2494 2877 0.840288 AGTGCATGGGTGTAGGGTGA 60.840 55.000 0.00 0.00 0.00 4.02
2514 2897 0.624206 TTGGGCTCCTGGATGGATCA 60.624 55.000 0.00 0.00 45.16 2.92
2522 2905 1.969923 CCTGGATGGATCAGAGGAGAC 59.030 57.143 0.00 0.00 38.35 3.36
2525 2908 2.023598 TGGATGGATCAGAGGAGACTGT 60.024 50.000 0.00 0.00 44.43 3.55
2538 2921 3.129287 AGGAGACTGTTTGTTTGCAAGTG 59.871 43.478 0.00 0.00 41.13 3.16
2566 2949 2.101380 GTTGTTTGTGCCGTGCGT 59.899 55.556 0.00 0.00 0.00 5.24
2567 2950 1.352404 GTTGTTTGTGCCGTGCGTA 59.648 52.632 0.00 0.00 0.00 4.42
2568 2951 0.926628 GTTGTTTGTGCCGTGCGTAC 60.927 55.000 0.00 0.00 0.00 3.67
2587 2970 5.002739 CGTACGTACGTACTTTCAATTTGC 58.997 41.667 40.05 20.37 46.22 3.68
2594 2977 4.739716 ACGTACTTTCAATTTGCTTGCTTG 59.260 37.500 0.00 0.00 34.66 4.01
2596 2979 3.469739 ACTTTCAATTTGCTTGCTTGGG 58.530 40.909 0.00 0.00 34.66 4.12
2605 2988 0.961753 GCTTGCTTGGGTTGCTTAGT 59.038 50.000 0.00 0.00 0.00 2.24
2606 2989 1.341209 GCTTGCTTGGGTTGCTTAGTT 59.659 47.619 0.00 0.00 0.00 2.24
2607 2990 2.863704 GCTTGCTTGGGTTGCTTAGTTG 60.864 50.000 0.00 0.00 0.00 3.16
2608 2991 0.673437 TGCTTGGGTTGCTTAGTTGC 59.327 50.000 0.00 0.00 0.00 4.17
2609 2992 0.961753 GCTTGGGTTGCTTAGTTGCT 59.038 50.000 0.00 0.00 0.00 3.91
2610 2993 1.336240 GCTTGGGTTGCTTAGTTGCTG 60.336 52.381 0.00 0.00 0.00 4.41
2611 2994 1.956477 CTTGGGTTGCTTAGTTGCTGT 59.044 47.619 0.00 0.00 0.00 4.40
2612 2995 2.065899 TGGGTTGCTTAGTTGCTGTT 57.934 45.000 0.00 0.00 0.00 3.16
2613 2996 1.680735 TGGGTTGCTTAGTTGCTGTTG 59.319 47.619 0.00 0.00 0.00 3.33
2614 2997 1.953686 GGGTTGCTTAGTTGCTGTTGA 59.046 47.619 0.00 0.00 0.00 3.18
2615 2998 2.558359 GGGTTGCTTAGTTGCTGTTGAT 59.442 45.455 0.00 0.00 0.00 2.57
2616 2999 3.366374 GGGTTGCTTAGTTGCTGTTGATC 60.366 47.826 0.00 0.00 0.00 2.92
2617 3000 3.482786 GTTGCTTAGTTGCTGTTGATCG 58.517 45.455 0.00 0.00 0.00 3.69
2618 3001 2.766313 TGCTTAGTTGCTGTTGATCGT 58.234 42.857 0.00 0.00 0.00 3.73
2619 3002 2.736721 TGCTTAGTTGCTGTTGATCGTC 59.263 45.455 0.00 0.00 0.00 4.20
2620 3003 2.222596 GCTTAGTTGCTGTTGATCGTCG 60.223 50.000 0.00 0.00 0.00 5.12
2621 3004 3.242518 CTTAGTTGCTGTTGATCGTCGA 58.757 45.455 0.00 0.00 0.00 4.20
2622 3005 1.419374 AGTTGCTGTTGATCGTCGAC 58.581 50.000 5.18 5.18 0.00 4.20
2623 3006 0.091344 GTTGCTGTTGATCGTCGACG 59.909 55.000 31.30 31.30 33.44 5.12
2624 3007 0.318360 TTGCTGTTGATCGTCGACGT 60.318 50.000 34.40 22.83 40.80 4.34
2625 3008 0.728129 TGCTGTTGATCGTCGACGTC 60.728 55.000 34.40 28.50 40.80 4.34
2626 3009 1.721257 GCTGTTGATCGTCGACGTCG 61.721 60.000 34.40 31.30 40.80 5.12
2639 3022 1.469917 GACGTCGAGTCGTTGTTTCA 58.530 50.000 13.12 0.00 44.21 2.69
2640 3023 2.049228 GACGTCGAGTCGTTGTTTCAT 58.951 47.619 13.12 0.00 44.21 2.57
2641 3024 2.049228 ACGTCGAGTCGTTGTTTCATC 58.951 47.619 13.12 0.00 41.37 2.92
2642 3025 1.055891 CGTCGAGTCGTTGTTTCATCG 59.944 52.381 13.12 1.85 0.00 3.84
2643 3026 2.049228 GTCGAGTCGTTGTTTCATCGT 58.951 47.619 13.12 0.00 0.00 3.73
2644 3027 3.228749 GTCGAGTCGTTGTTTCATCGTA 58.771 45.455 13.12 0.00 0.00 3.43
2645 3028 3.297461 GTCGAGTCGTTGTTTCATCGTAG 59.703 47.826 13.12 0.00 0.00 3.51
2646 3029 3.187022 TCGAGTCGTTGTTTCATCGTAGA 59.813 43.478 13.12 0.00 45.75 2.59
2647 3030 3.538782 CGAGTCGTTGTTTCATCGTAGAG 59.461 47.826 3.82 0.00 43.63 2.43
2648 3031 3.243336 AGTCGTTGTTTCATCGTAGAGC 58.757 45.455 0.00 0.00 43.63 4.09
2649 3032 2.026507 GTCGTTGTTTCATCGTAGAGCG 59.973 50.000 0.00 0.00 43.63 5.03
2650 3033 1.320555 CGTTGTTTCATCGTAGAGCGG 59.679 52.381 0.00 0.00 43.63 5.52
2651 3034 2.602878 GTTGTTTCATCGTAGAGCGGA 58.397 47.619 0.00 0.00 43.63 5.54
2652 3035 2.561733 TGTTTCATCGTAGAGCGGAG 57.438 50.000 0.00 0.00 43.63 4.63
2653 3036 2.089201 TGTTTCATCGTAGAGCGGAGA 58.911 47.619 0.00 0.00 43.63 3.71
2654 3037 2.490509 TGTTTCATCGTAGAGCGGAGAA 59.509 45.455 0.00 0.00 43.63 2.87
2655 3038 3.130516 TGTTTCATCGTAGAGCGGAGAAT 59.869 43.478 0.00 0.00 43.63 2.40
2656 3039 4.337274 TGTTTCATCGTAGAGCGGAGAATA 59.663 41.667 0.00 0.00 43.63 1.75
2657 3040 5.163591 TGTTTCATCGTAGAGCGGAGAATAA 60.164 40.000 0.00 0.00 43.63 1.40
2658 3041 4.750952 TCATCGTAGAGCGGAGAATAAG 57.249 45.455 0.00 0.00 43.63 1.73
2659 3042 3.058155 TCATCGTAGAGCGGAGAATAAGC 60.058 47.826 0.00 0.00 43.63 3.09
2660 3043 2.573369 TCGTAGAGCGGAGAATAAGCT 58.427 47.619 0.00 0.00 44.80 3.74
2663 3046 3.187211 GAGCGGAGAATAAGCTCGG 57.813 57.895 0.81 0.00 46.14 4.63
2664 3047 0.669077 GAGCGGAGAATAAGCTCGGA 59.331 55.000 0.81 0.00 46.14 4.55
2665 3048 1.067212 GAGCGGAGAATAAGCTCGGAA 59.933 52.381 0.81 0.00 46.14 4.30
2666 3049 1.202428 AGCGGAGAATAAGCTCGGAAC 60.202 52.381 0.00 0.00 36.33 3.62
2667 3050 1.854227 CGGAGAATAAGCTCGGAACC 58.146 55.000 0.00 0.00 37.40 3.62
2668 3051 1.409427 CGGAGAATAAGCTCGGAACCT 59.591 52.381 0.00 0.00 37.40 3.50
2669 3052 2.544069 CGGAGAATAAGCTCGGAACCTC 60.544 54.545 0.00 0.00 37.40 3.85
2670 3053 2.224090 GGAGAATAAGCTCGGAACCTCC 60.224 54.545 0.00 0.00 35.74 4.30
2671 3054 2.431057 GAGAATAAGCTCGGAACCTCCA 59.569 50.000 0.00 0.00 35.91 3.86
2672 3055 3.041946 AGAATAAGCTCGGAACCTCCAT 58.958 45.455 0.00 0.00 35.91 3.41
2673 3056 3.070302 AGAATAAGCTCGGAACCTCCATC 59.930 47.826 0.00 0.00 35.91 3.51
2674 3057 2.160721 TAAGCTCGGAACCTCCATCT 57.839 50.000 0.00 0.00 35.91 2.90
2675 3058 0.539051 AAGCTCGGAACCTCCATCTG 59.461 55.000 0.00 0.00 35.91 2.90
2676 3059 1.144936 GCTCGGAACCTCCATCTGG 59.855 63.158 0.00 0.00 35.91 3.86
2677 3060 1.826024 CTCGGAACCTCCATCTGGG 59.174 63.158 0.00 0.00 35.91 4.45
2678 3061 2.190578 CGGAACCTCCATCTGGGC 59.809 66.667 0.00 0.00 35.91 5.36
2679 3062 2.370445 CGGAACCTCCATCTGGGCT 61.370 63.158 0.00 0.00 35.91 5.19
2680 3063 1.915078 CGGAACCTCCATCTGGGCTT 61.915 60.000 0.00 0.00 35.91 4.35
2681 3064 0.332972 GGAACCTCCATCTGGGCTTT 59.667 55.000 0.00 0.00 36.28 3.51
2682 3065 1.683319 GGAACCTCCATCTGGGCTTTC 60.683 57.143 0.00 0.00 36.28 2.62
2683 3066 1.283321 GAACCTCCATCTGGGCTTTCT 59.717 52.381 0.00 0.00 36.21 2.52
2684 3067 0.915364 ACCTCCATCTGGGCTTTCTC 59.085 55.000 0.00 0.00 36.21 2.87
2685 3068 1.211456 CCTCCATCTGGGCTTTCTCT 58.789 55.000 0.00 0.00 36.21 3.10
2686 3069 2.293184 ACCTCCATCTGGGCTTTCTCTA 60.293 50.000 0.00 0.00 36.21 2.43
2687 3070 2.978278 CCTCCATCTGGGCTTTCTCTAT 59.022 50.000 0.00 0.00 36.21 1.98
2688 3071 3.393941 CCTCCATCTGGGCTTTCTCTATT 59.606 47.826 0.00 0.00 36.21 1.73
2689 3072 4.141298 CCTCCATCTGGGCTTTCTCTATTT 60.141 45.833 0.00 0.00 36.21 1.40
2690 3073 5.444176 CTCCATCTGGGCTTTCTCTATTTT 58.556 41.667 0.00 0.00 36.21 1.82
2691 3074 6.409695 CCTCCATCTGGGCTTTCTCTATTTTA 60.410 42.308 0.00 0.00 36.21 1.52
2692 3075 7.154191 TCCATCTGGGCTTTCTCTATTTTAT 57.846 36.000 0.00 0.00 36.21 1.40
2693 3076 7.586349 TCCATCTGGGCTTTCTCTATTTTATT 58.414 34.615 0.00 0.00 36.21 1.40
2694 3077 7.503566 TCCATCTGGGCTTTCTCTATTTTATTG 59.496 37.037 0.00 0.00 36.21 1.90
2695 3078 7.286316 CCATCTGGGCTTTCTCTATTTTATTGT 59.714 37.037 0.00 0.00 0.00 2.71
2696 3079 9.342308 CATCTGGGCTTTCTCTATTTTATTGTA 57.658 33.333 0.00 0.00 0.00 2.41
2697 3080 8.732746 TCTGGGCTTTCTCTATTTTATTGTAC 57.267 34.615 0.00 0.00 0.00 2.90
2698 3081 8.548877 TCTGGGCTTTCTCTATTTTATTGTACT 58.451 33.333 0.00 0.00 0.00 2.73
2699 3082 9.178758 CTGGGCTTTCTCTATTTTATTGTACTT 57.821 33.333 0.00 0.00 0.00 2.24
2700 3083 9.174166 TGGGCTTTCTCTATTTTATTGTACTTC 57.826 33.333 0.00 0.00 0.00 3.01
2701 3084 8.336080 GGGCTTTCTCTATTTTATTGTACTTCG 58.664 37.037 0.00 0.00 0.00 3.79
2702 3085 9.095065 GGCTTTCTCTATTTTATTGTACTTCGA 57.905 33.333 0.00 0.00 0.00 3.71
2713 3096 8.842358 TTTATTGTACTTCGATCTTGTTTCCT 57.158 30.769 0.00 0.00 0.00 3.36
2714 3097 6.727824 ATTGTACTTCGATCTTGTTTCCTG 57.272 37.500 0.00 0.00 0.00 3.86
2715 3098 3.994392 TGTACTTCGATCTTGTTTCCTGC 59.006 43.478 0.00 0.00 0.00 4.85
2716 3099 2.427506 ACTTCGATCTTGTTTCCTGCC 58.572 47.619 0.00 0.00 0.00 4.85
2717 3100 2.039084 ACTTCGATCTTGTTTCCTGCCT 59.961 45.455 0.00 0.00 0.00 4.75
2718 3101 2.859165 TCGATCTTGTTTCCTGCCTT 57.141 45.000 0.00 0.00 0.00 4.35
2719 3102 3.140325 TCGATCTTGTTTCCTGCCTTT 57.860 42.857 0.00 0.00 0.00 3.11
2720 3103 3.074412 TCGATCTTGTTTCCTGCCTTTC 58.926 45.455 0.00 0.00 0.00 2.62
2721 3104 2.159653 CGATCTTGTTTCCTGCCTTTCG 60.160 50.000 0.00 0.00 0.00 3.46
2722 3105 2.341846 TCTTGTTTCCTGCCTTTCGT 57.658 45.000 0.00 0.00 0.00 3.85
2723 3106 2.218603 TCTTGTTTCCTGCCTTTCGTC 58.781 47.619 0.00 0.00 0.00 4.20
2724 3107 0.941542 TTGTTTCCTGCCTTTCGTCG 59.058 50.000 0.00 0.00 0.00 5.12
2725 3108 0.882927 TGTTTCCTGCCTTTCGTCGG 60.883 55.000 0.00 0.00 0.00 4.79
2726 3109 0.601841 GTTTCCTGCCTTTCGTCGGA 60.602 55.000 0.00 0.00 0.00 4.55
2727 3110 0.107081 TTTCCTGCCTTTCGTCGGAA 59.893 50.000 0.00 0.00 32.30 4.30
2728 3111 0.323629 TTCCTGCCTTTCGTCGGAAT 59.676 50.000 0.00 0.00 30.88 3.01
2729 3112 0.108329 TCCTGCCTTTCGTCGGAATC 60.108 55.000 0.00 0.00 30.88 2.52
2730 3113 1.090052 CCTGCCTTTCGTCGGAATCC 61.090 60.000 0.00 0.00 30.88 3.01
2731 3114 0.391130 CTGCCTTTCGTCGGAATCCA 60.391 55.000 0.00 0.00 30.88 3.41
2732 3115 0.251916 TGCCTTTCGTCGGAATCCAT 59.748 50.000 0.00 0.00 30.88 3.41
2733 3116 0.657840 GCCTTTCGTCGGAATCCATG 59.342 55.000 0.00 0.00 30.88 3.66
2734 3117 1.299541 CCTTTCGTCGGAATCCATGG 58.700 55.000 4.97 4.97 30.88 3.66
2735 3118 0.657840 CTTTCGTCGGAATCCATGGC 59.342 55.000 6.96 0.00 30.88 4.40
2736 3119 1.087202 TTTCGTCGGAATCCATGGCG 61.087 55.000 6.96 4.85 30.88 5.69
2737 3120 2.202878 CGTCGGAATCCATGGCGT 60.203 61.111 6.96 0.00 0.00 5.68
2738 3121 1.066752 CGTCGGAATCCATGGCGTA 59.933 57.895 6.96 0.00 0.00 4.42
2739 3122 0.319555 CGTCGGAATCCATGGCGTAT 60.320 55.000 6.96 0.00 0.00 3.06
2740 3123 1.872237 CGTCGGAATCCATGGCGTATT 60.872 52.381 6.96 1.19 0.00 1.89
2741 3124 2.218603 GTCGGAATCCATGGCGTATTT 58.781 47.619 6.96 0.00 0.00 1.40
2742 3125 2.616842 GTCGGAATCCATGGCGTATTTT 59.383 45.455 6.96 0.00 0.00 1.82
2743 3126 2.616376 TCGGAATCCATGGCGTATTTTG 59.384 45.455 6.96 0.00 0.00 2.44
2744 3127 2.616376 CGGAATCCATGGCGTATTTTGA 59.384 45.455 6.96 0.00 0.00 2.69
2745 3128 3.548014 CGGAATCCATGGCGTATTTTGAC 60.548 47.826 6.96 0.00 0.00 3.18
2746 3129 3.632145 GGAATCCATGGCGTATTTTGACT 59.368 43.478 6.96 0.00 0.00 3.41
2747 3130 4.498009 GGAATCCATGGCGTATTTTGACTG 60.498 45.833 6.96 0.00 0.00 3.51
2748 3131 3.066291 TCCATGGCGTATTTTGACTGT 57.934 42.857 6.96 0.00 0.00 3.55
2749 3132 3.417101 TCCATGGCGTATTTTGACTGTT 58.583 40.909 6.96 0.00 0.00 3.16
2750 3133 3.823873 TCCATGGCGTATTTTGACTGTTT 59.176 39.130 6.96 0.00 0.00 2.83
2751 3134 4.279671 TCCATGGCGTATTTTGACTGTTTT 59.720 37.500 6.96 0.00 0.00 2.43
2752 3135 4.621034 CCATGGCGTATTTTGACTGTTTTC 59.379 41.667 0.00 0.00 0.00 2.29
2753 3136 4.902443 TGGCGTATTTTGACTGTTTTCA 57.098 36.364 0.00 0.00 0.00 2.69
2754 3137 5.250235 TGGCGTATTTTGACTGTTTTCAA 57.750 34.783 0.00 0.00 33.55 2.69
2755 3138 5.038033 TGGCGTATTTTGACTGTTTTCAAC 58.962 37.500 0.00 0.00 35.18 3.18
2756 3139 5.163602 TGGCGTATTTTGACTGTTTTCAACT 60.164 36.000 0.00 0.00 35.18 3.16
2757 3140 5.746721 GGCGTATTTTGACTGTTTTCAACTT 59.253 36.000 0.00 0.00 35.18 2.66
2758 3141 6.254804 GGCGTATTTTGACTGTTTTCAACTTT 59.745 34.615 0.00 0.00 35.18 2.66
2759 3142 7.110511 GCGTATTTTGACTGTTTTCAACTTTG 58.889 34.615 0.00 0.00 35.18 2.77
2760 3143 7.608755 CGTATTTTGACTGTTTTCAACTTTGG 58.391 34.615 0.00 0.00 35.18 3.28
2761 3144 7.274686 CGTATTTTGACTGTTTTCAACTTTGGT 59.725 33.333 0.00 0.00 35.18 3.67
2762 3145 7.595311 ATTTTGACTGTTTTCAACTTTGGTC 57.405 32.000 0.00 0.00 35.18 4.02
2763 3146 5.713792 TTGACTGTTTTCAACTTTGGTCA 57.286 34.783 0.00 0.00 30.29 4.02
2764 3147 5.913137 TGACTGTTTTCAACTTTGGTCAT 57.087 34.783 0.00 0.00 0.00 3.06
2765 3148 7.397892 TTGACTGTTTTCAACTTTGGTCATA 57.602 32.000 0.00 0.00 32.51 2.15
2766 3149 7.397892 TGACTGTTTTCAACTTTGGTCATAA 57.602 32.000 0.00 0.00 0.00 1.90
2767 3150 7.831753 TGACTGTTTTCAACTTTGGTCATAAA 58.168 30.769 0.00 0.00 0.00 1.40
2768 3151 8.474025 TGACTGTTTTCAACTTTGGTCATAAAT 58.526 29.630 0.00 0.00 0.00 1.40
2769 3152 9.313118 GACTGTTTTCAACTTTGGTCATAAATT 57.687 29.630 0.00 0.00 0.00 1.82
2770 3153 9.097257 ACTGTTTTCAACTTTGGTCATAAATTG 57.903 29.630 0.00 0.00 0.00 2.32
2771 3154 9.097257 CTGTTTTCAACTTTGGTCATAAATTGT 57.903 29.630 0.00 0.00 0.00 2.71
2772 3155 9.442047 TGTTTTCAACTTTGGTCATAAATTGTT 57.558 25.926 0.00 0.00 0.00 2.83
2813 3196 9.869757 ATGAAGTTTACATTAACAATTTAGGGC 57.130 29.630 0.00 0.00 0.00 5.19
2814 3197 8.861086 TGAAGTTTACATTAACAATTTAGGGCA 58.139 29.630 0.00 0.00 0.00 5.36
2815 3198 9.869757 GAAGTTTACATTAACAATTTAGGGCAT 57.130 29.630 0.00 0.00 0.00 4.40
2816 3199 9.869757 AAGTTTACATTAACAATTTAGGGCATC 57.130 29.630 0.00 0.00 0.00 3.91
2817 3200 9.255029 AGTTTACATTAACAATTTAGGGCATCT 57.745 29.630 0.00 0.00 0.00 2.90
2818 3201 9.516314 GTTTACATTAACAATTTAGGGCATCTC 57.484 33.333 0.00 0.00 0.00 2.75
2819 3202 9.474313 TTTACATTAACAATTTAGGGCATCTCT 57.526 29.630 0.00 0.00 0.00 3.10
2822 3205 8.903820 ACATTAACAATTTAGGGCATCTCTAAC 58.096 33.333 0.00 0.00 0.00 2.34
2823 3206 7.548196 TTAACAATTTAGGGCATCTCTAACG 57.452 36.000 0.00 0.00 0.00 3.18
2824 3207 3.877508 ACAATTTAGGGCATCTCTAACGC 59.122 43.478 0.00 0.00 0.00 4.84
2825 3208 2.218953 TTTAGGGCATCTCTAACGCG 57.781 50.000 3.53 3.53 0.00 6.01
2826 3209 1.108776 TTAGGGCATCTCTAACGCGT 58.891 50.000 5.58 5.58 0.00 6.01
2827 3210 1.971481 TAGGGCATCTCTAACGCGTA 58.029 50.000 14.46 0.00 0.00 4.42
2828 3211 0.384669 AGGGCATCTCTAACGCGTAC 59.615 55.000 14.46 0.00 0.00 3.67
2829 3212 0.596859 GGGCATCTCTAACGCGTACC 60.597 60.000 14.46 4.06 0.00 3.34
2830 3213 0.596859 GGCATCTCTAACGCGTACCC 60.597 60.000 14.46 0.20 0.00 3.69
2831 3214 0.384669 GCATCTCTAACGCGTACCCT 59.615 55.000 14.46 0.00 0.00 4.34
2832 3215 1.202382 GCATCTCTAACGCGTACCCTT 60.202 52.381 14.46 0.00 0.00 3.95
2833 3216 2.033801 GCATCTCTAACGCGTACCCTTA 59.966 50.000 14.46 0.00 0.00 2.69
2834 3217 3.489738 GCATCTCTAACGCGTACCCTTAA 60.490 47.826 14.46 0.00 0.00 1.85
2835 3218 4.675510 CATCTCTAACGCGTACCCTTAAA 58.324 43.478 14.46 0.00 0.00 1.52
2836 3219 4.782019 TCTCTAACGCGTACCCTTAAAA 57.218 40.909 14.46 0.00 0.00 1.52
2837 3220 4.485163 TCTCTAACGCGTACCCTTAAAAC 58.515 43.478 14.46 0.00 0.00 2.43
2838 3221 3.241701 TCTAACGCGTACCCTTAAAACG 58.758 45.455 14.46 0.00 39.55 3.60
2839 3222 1.147473 AACGCGTACCCTTAAAACGG 58.853 50.000 14.46 0.00 37.12 4.44
2840 3223 0.316841 ACGCGTACCCTTAAAACGGA 59.683 50.000 11.67 0.00 37.12 4.69
2841 3224 0.715551 CGCGTACCCTTAAAACGGAC 59.284 55.000 0.00 0.00 37.12 4.79
2842 3225 1.794512 GCGTACCCTTAAAACGGACA 58.205 50.000 0.00 0.00 37.12 4.02
2843 3226 1.460743 GCGTACCCTTAAAACGGACAC 59.539 52.381 0.00 0.00 37.12 3.67
2844 3227 2.753296 CGTACCCTTAAAACGGACACA 58.247 47.619 0.00 0.00 33.13 3.72
2845 3228 2.476241 CGTACCCTTAAAACGGACACAC 59.524 50.000 0.00 0.00 33.13 3.82
2846 3229 3.732212 GTACCCTTAAAACGGACACACT 58.268 45.455 0.00 0.00 0.00 3.55
2847 3230 4.558496 CGTACCCTTAAAACGGACACACTA 60.558 45.833 0.00 0.00 33.13 2.74
2848 3231 4.628963 ACCCTTAAAACGGACACACTAT 57.371 40.909 0.00 0.00 0.00 2.12
2849 3232 4.572909 ACCCTTAAAACGGACACACTATC 58.427 43.478 0.00 0.00 0.00 2.08
2850 3233 3.615496 CCCTTAAAACGGACACACTATCG 59.385 47.826 0.00 0.00 0.00 2.92
2851 3234 3.615496 CCTTAAAACGGACACACTATCGG 59.385 47.826 0.00 0.00 0.00 4.18
2852 3235 4.487948 CTTAAAACGGACACACTATCGGA 58.512 43.478 0.00 0.00 0.00 4.55
2853 3236 3.604875 AAAACGGACACACTATCGGAT 57.395 42.857 0.00 0.00 0.00 4.18
2854 3237 2.579207 AACGGACACACTATCGGATG 57.421 50.000 0.00 0.00 0.00 3.51
2855 3238 1.471119 ACGGACACACTATCGGATGT 58.529 50.000 0.00 0.00 0.00 3.06
2862 3245 2.743938 ACACTATCGGATGTGAATCGC 58.256 47.619 20.04 0.00 37.59 4.58
2863 3246 1.716050 CACTATCGGATGTGAATCGCG 59.284 52.381 0.00 0.00 36.38 5.87
2864 3247 1.337071 ACTATCGGATGTGAATCGCGT 59.663 47.619 5.77 0.00 0.00 6.01
2865 3248 2.223735 ACTATCGGATGTGAATCGCGTT 60.224 45.455 5.77 0.00 0.00 4.84
2866 3249 1.209128 ATCGGATGTGAATCGCGTTC 58.791 50.000 5.77 10.15 37.35 3.95
2867 3250 1.137459 TCGGATGTGAATCGCGTTCG 61.137 55.000 10.24 10.24 39.80 3.95
2868 3251 1.636340 GGATGTGAATCGCGTTCGG 59.364 57.895 5.77 0.00 39.80 4.30
2869 3252 0.804544 GGATGTGAATCGCGTTCGGA 60.805 55.000 5.77 0.75 39.80 4.55
2870 3253 1.209128 GATGTGAATCGCGTTCGGAT 58.791 50.000 5.77 5.50 39.80 4.18
2871 3254 0.930310 ATGTGAATCGCGTTCGGATG 59.070 50.000 5.77 0.00 39.80 3.51
2872 3255 1.012234 GTGAATCGCGTTCGGATGC 60.012 57.895 5.77 0.00 39.80 3.91
2873 3256 2.171079 TGAATCGCGTTCGGATGCC 61.171 57.895 5.77 0.00 39.80 4.40
2874 3257 1.883084 GAATCGCGTTCGGATGCCT 60.883 57.895 5.77 0.00 34.17 4.75
2875 3258 1.429148 GAATCGCGTTCGGATGCCTT 61.429 55.000 5.77 0.00 34.17 4.35
2876 3259 1.024579 AATCGCGTTCGGATGCCTTT 61.025 50.000 5.77 0.00 34.17 3.11
2877 3260 1.705337 ATCGCGTTCGGATGCCTTTG 61.705 55.000 5.77 0.00 34.17 2.77
2878 3261 2.202479 GCGTTCGGATGCCTTTGC 60.202 61.111 0.00 0.00 38.26 3.68
2879 3262 2.098298 CGTTCGGATGCCTTTGCG 59.902 61.111 0.00 0.00 41.78 4.85
2880 3263 2.485122 GTTCGGATGCCTTTGCGG 59.515 61.111 0.00 0.00 41.78 5.69
2881 3264 2.038269 GTTCGGATGCCTTTGCGGA 61.038 57.895 0.00 0.00 41.78 5.54
2882 3265 2.038269 TTCGGATGCCTTTGCGGAC 61.038 57.895 0.00 0.00 41.78 4.79
2883 3266 2.739849 TTCGGATGCCTTTGCGGACA 62.740 55.000 0.00 0.00 41.78 4.02
2884 3267 2.877691 GGATGCCTTTGCGGACAC 59.122 61.111 0.00 0.00 41.78 3.67
2885 3268 2.480555 GATGCCTTTGCGGACACG 59.519 61.111 0.00 0.00 41.78 4.49
2886 3269 2.031919 ATGCCTTTGCGGACACGA 59.968 55.556 0.00 0.00 44.60 4.35
2887 3270 1.369091 GATGCCTTTGCGGACACGAT 61.369 55.000 0.00 0.00 44.60 3.73
2888 3271 0.107897 ATGCCTTTGCGGACACGATA 60.108 50.000 0.00 0.00 44.60 2.92
2889 3272 1.017177 TGCCTTTGCGGACACGATAC 61.017 55.000 0.00 0.00 44.60 2.24
2890 3273 1.017177 GCCTTTGCGGACACGATACA 61.017 55.000 0.00 0.00 44.60 2.29
2891 3274 0.719465 CCTTTGCGGACACGATACAC 59.281 55.000 0.00 0.00 44.60 2.90
2892 3275 0.365523 CTTTGCGGACACGATACACG 59.634 55.000 0.00 0.00 44.60 4.49
2893 3276 0.039346 TTTGCGGACACGATACACGA 60.039 50.000 0.00 0.00 45.77 4.35
2894 3277 0.455464 TTGCGGACACGATACACGAG 60.455 55.000 0.00 0.00 45.77 4.18
2895 3278 2.222217 GCGGACACGATACACGAGC 61.222 63.158 0.00 0.00 45.77 5.03
2896 3279 1.585521 CGGACACGATACACGAGCC 60.586 63.158 0.00 0.00 45.77 4.70
2897 3280 1.585521 GGACACGATACACGAGCCG 60.586 63.158 0.00 0.00 45.77 5.52
2898 3281 1.585521 GACACGATACACGAGCCGG 60.586 63.158 0.00 0.00 45.77 6.13
2899 3282 2.954868 CACGATACACGAGCCGGC 60.955 66.667 21.89 21.89 45.77 6.13
2900 3283 4.203076 ACGATACACGAGCCGGCC 62.203 66.667 26.15 14.23 45.77 6.13
2901 3284 4.201679 CGATACACGAGCCGGCCA 62.202 66.667 26.15 1.31 45.77 5.36
2902 3285 2.421739 GATACACGAGCCGGCCAT 59.578 61.111 26.15 4.93 0.00 4.40
2903 3286 1.664965 GATACACGAGCCGGCCATC 60.665 63.158 26.15 14.91 0.00 3.51
2904 3287 3.165160 ATACACGAGCCGGCCATCC 62.165 63.158 26.15 9.35 0.00 3.51
2906 3289 4.776322 CACGAGCCGGCCATCCAA 62.776 66.667 26.15 0.00 0.00 3.53
2907 3290 4.778143 ACGAGCCGGCCATCCAAC 62.778 66.667 26.15 5.17 0.00 3.77
2913 3296 2.671619 CGGCCATCCAACCGTGTT 60.672 61.111 2.24 0.00 44.46 3.32
2914 3297 2.265182 CGGCCATCCAACCGTGTTT 61.265 57.895 2.24 0.00 44.46 2.83
2915 3298 0.956410 CGGCCATCCAACCGTGTTTA 60.956 55.000 2.24 0.00 44.46 2.01
2916 3299 1.249407 GGCCATCCAACCGTGTTTAA 58.751 50.000 0.00 0.00 0.00 1.52
2917 3300 1.614413 GGCCATCCAACCGTGTTTAAA 59.386 47.619 0.00 0.00 0.00 1.52
2918 3301 2.608506 GGCCATCCAACCGTGTTTAAAC 60.609 50.000 11.54 11.54 0.00 2.01
2919 3302 2.918968 GCCATCCAACCGTGTTTAAACG 60.919 50.000 13.45 3.33 43.20 3.60
2920 3303 2.291190 CCATCCAACCGTGTTTAAACGT 59.709 45.455 13.45 2.95 42.01 3.99
2921 3304 3.547601 CATCCAACCGTGTTTAAACGTC 58.452 45.455 13.45 8.26 42.01 4.34
2922 3305 1.939255 TCCAACCGTGTTTAAACGTCC 59.061 47.619 13.45 3.55 42.01 4.79
2923 3306 1.941975 CCAACCGTGTTTAAACGTCCT 59.058 47.619 13.45 0.00 42.01 3.85
2924 3307 2.032636 CCAACCGTGTTTAAACGTCCTC 60.033 50.000 13.45 1.61 42.01 3.71
2925 3308 1.869774 ACCGTGTTTAAACGTCCTCC 58.130 50.000 13.45 0.00 42.01 4.30
2926 3309 1.150827 CCGTGTTTAAACGTCCTCCC 58.849 55.000 13.45 0.00 42.01 4.30
2927 3310 1.270465 CCGTGTTTAAACGTCCTCCCT 60.270 52.381 13.45 0.00 42.01 4.20
2928 3311 2.486918 CGTGTTTAAACGTCCTCCCTT 58.513 47.619 13.45 0.00 38.74 3.95
2929 3312 2.222445 CGTGTTTAAACGTCCTCCCTTG 59.778 50.000 13.45 0.00 38.74 3.61
2930 3313 3.208594 GTGTTTAAACGTCCTCCCTTGT 58.791 45.455 13.45 0.00 0.00 3.16
2931 3314 3.628942 GTGTTTAAACGTCCTCCCTTGTT 59.371 43.478 13.45 0.00 0.00 2.83
2932 3315 4.096833 GTGTTTAAACGTCCTCCCTTGTTT 59.903 41.667 13.45 0.00 38.10 2.83
2933 3316 4.705991 TGTTTAAACGTCCTCCCTTGTTTT 59.294 37.500 13.45 0.00 36.14 2.43
2934 3317 5.185442 TGTTTAAACGTCCTCCCTTGTTTTT 59.815 36.000 13.45 0.00 36.14 1.94
2954 3337 2.358322 TTTTTCTCAAGTCCGCCCTT 57.642 45.000 0.00 0.00 0.00 3.95
2955 3338 1.892209 TTTTCTCAAGTCCGCCCTTC 58.108 50.000 0.00 0.00 0.00 3.46
2956 3339 0.320421 TTTCTCAAGTCCGCCCTTCG 60.320 55.000 0.00 0.00 38.08 3.79
2967 3350 4.157607 CCCTTCGGCAGTGTTGTT 57.842 55.556 0.00 0.00 0.00 2.83
2968 3351 2.414750 CCCTTCGGCAGTGTTGTTT 58.585 52.632 0.00 0.00 0.00 2.83
2969 3352 0.030638 CCCTTCGGCAGTGTTGTTTG 59.969 55.000 0.00 0.00 0.00 2.93
2970 3353 0.738389 CCTTCGGCAGTGTTGTTTGT 59.262 50.000 0.00 0.00 0.00 2.83
2971 3354 1.533756 CCTTCGGCAGTGTTGTTTGTG 60.534 52.381 0.00 0.00 0.00 3.33
2972 3355 0.179150 TTCGGCAGTGTTGTTTGTGC 60.179 50.000 0.00 0.00 35.07 4.57
2975 3358 3.739077 GCAGTGTTGTTTGTGCCTT 57.261 47.368 0.00 0.00 0.00 4.35
2976 3359 1.280066 GCAGTGTTGTTTGTGCCTTG 58.720 50.000 0.00 0.00 0.00 3.61
2977 3360 1.280066 CAGTGTTGTTTGTGCCTTGC 58.720 50.000 0.00 0.00 0.00 4.01
2978 3361 0.175531 AGTGTTGTTTGTGCCTTGCC 59.824 50.000 0.00 0.00 0.00 4.52
2979 3362 1.140589 TGTTGTTTGTGCCTTGCCG 59.859 52.632 0.00 0.00 0.00 5.69
2980 3363 1.140804 GTTGTTTGTGCCTTGCCGT 59.859 52.632 0.00 0.00 0.00 5.68
3011 3394 3.377172 ACGTACTTTCACTTTGCTTGCTT 59.623 39.130 0.00 0.00 0.00 3.91
3012 3395 3.725740 CGTACTTTCACTTTGCTTGCTTG 59.274 43.478 0.00 0.00 0.00 4.01
3013 3396 3.169355 ACTTTCACTTTGCTTGCTTGG 57.831 42.857 0.00 0.00 0.00 3.61
3014 3397 1.862827 CTTTCACTTTGCTTGCTTGGC 59.137 47.619 0.00 0.00 0.00 4.52
3015 3398 1.113788 TTCACTTTGCTTGCTTGGCT 58.886 45.000 0.00 0.00 0.00 4.75
3016 3399 1.113788 TCACTTTGCTTGCTTGGCTT 58.886 45.000 0.00 0.00 0.00 4.35
3017 3400 1.202440 TCACTTTGCTTGCTTGGCTTG 60.202 47.619 0.00 0.00 0.00 4.01
3018 3401 0.531311 ACTTTGCTTGCTTGGCTTGC 60.531 50.000 0.00 0.00 0.00 4.01
3019 3402 1.226030 CTTTGCTTGCTTGGCTTGCC 61.226 55.000 4.43 4.43 0.00 4.52
3058 3450 0.179045 AGTCGTTGTTTGGAGCTGCT 60.179 50.000 6.82 0.00 0.00 4.24
3059 3451 0.040958 GTCGTTGTTTGGAGCTGCTG 60.041 55.000 7.01 0.00 0.00 4.41
3060 3452 1.370900 CGTTGTTTGGAGCTGCTGC 60.371 57.895 14.73 14.73 40.05 5.25
3083 3475 1.202428 GGTGATTGGTAGAGCGGAGAC 60.202 57.143 0.00 0.00 0.00 3.36
3092 3484 2.395651 GAGCGGAGACTAAGCTCGA 58.604 57.895 13.69 0.00 46.14 4.04
3093 3485 0.948678 GAGCGGAGACTAAGCTCGAT 59.051 55.000 13.69 0.00 46.14 3.59
3094 3486 0.948678 AGCGGAGACTAAGCTCGATC 59.051 55.000 0.00 0.00 36.33 3.69
3095 3487 0.384974 GCGGAGACTAAGCTCGATCG 60.385 60.000 9.36 9.36 35.74 3.69
3096 3488 0.384974 CGGAGACTAAGCTCGATCGC 60.385 60.000 11.09 0.00 35.74 4.58
3142 3537 9.917129 TCACTTTTATTGTACTTCGATCTTGTA 57.083 29.630 0.00 0.00 0.00 2.41
3184 3579 4.209307 TCCATGGCGTATTTTGACTGTA 57.791 40.909 6.96 0.00 0.00 2.74
3226 3621 6.772770 TTGTTTGCACAATCATTCTTCATG 57.227 33.333 0.00 0.00 38.03 3.07
3263 3663 0.651031 GCATCTTTAACGCCGACTCC 59.349 55.000 0.00 0.00 0.00 3.85
3271 3671 0.314935 AACGCCGACTCCTAAAACGA 59.685 50.000 0.00 0.00 0.00 3.85
3323 3729 1.136085 CCCGTTTGCAGACACAATACG 60.136 52.381 8.25 0.00 35.63 3.06
3328 3734 1.345176 GCAGACACAATACGCGAGC 59.655 57.895 15.93 0.00 0.00 5.03
3331 3737 2.508439 ACACAATACGCGAGCCGG 60.508 61.111 15.93 0.00 42.52 6.13
3354 3760 5.517299 GGCCATCTAATCATGTCCCCTAAAT 60.517 44.000 0.00 0.00 0.00 1.40
3356 3762 5.416952 CCATCTAATCATGTCCCCTAAATGC 59.583 44.000 0.00 0.00 0.00 3.56
3359 3765 0.182537 TCATGTCCCCTAAATGCCCG 59.817 55.000 0.00 0.00 0.00 6.13
3365 3771 2.519302 CCTAAATGCCCGCCCCTG 60.519 66.667 0.00 0.00 0.00 4.45
3366 3772 3.219198 CTAAATGCCCGCCCCTGC 61.219 66.667 0.00 0.00 0.00 4.85
3397 3804 6.017109 TCTCTTTCCACAACACTCAAAATAGC 60.017 38.462 0.00 0.00 0.00 2.97
3398 3805 5.827797 TCTTTCCACAACACTCAAAATAGCT 59.172 36.000 0.00 0.00 0.00 3.32
3399 3806 6.995686 TCTTTCCACAACACTCAAAATAGCTA 59.004 34.615 0.00 0.00 0.00 3.32
3400 3807 7.665559 TCTTTCCACAACACTCAAAATAGCTAT 59.334 33.333 0.00 0.00 0.00 2.97
3401 3808 8.856153 TTTCCACAACACTCAAAATAGCTATA 57.144 30.769 6.68 0.00 0.00 1.31
3402 3809 8.492673 TTCCACAACACTCAAAATAGCTATAG 57.507 34.615 6.68 3.11 0.00 1.31
3403 3810 7.047891 TCCACAACACTCAAAATAGCTATAGG 58.952 38.462 6.68 0.00 0.00 2.57
3404 3811 7.047891 CCACAACACTCAAAATAGCTATAGGA 58.952 38.462 6.68 4.38 0.00 2.94
3405 3812 7.552687 CCACAACACTCAAAATAGCTATAGGAA 59.447 37.037 6.68 0.00 0.00 3.36
3406 3813 8.946085 CACAACACTCAAAATAGCTATAGGAAA 58.054 33.333 6.68 0.00 0.00 3.13
3407 3814 9.686683 ACAACACTCAAAATAGCTATAGGAAAT 57.313 29.630 6.68 0.00 0.00 2.17
3433 3840 8.954950 AACAAAATTCATCCATAAACACACAA 57.045 26.923 0.00 0.00 0.00 3.33
3434 3841 8.954950 ACAAAATTCATCCATAAACACACAAA 57.045 26.923 0.00 0.00 0.00 2.83
3435 3842 9.558396 ACAAAATTCATCCATAAACACACAAAT 57.442 25.926 0.00 0.00 0.00 2.32
3440 3847 7.581213 TCATCCATAAACACACAAATATCCC 57.419 36.000 0.00 0.00 0.00 3.85
3441 3848 7.353525 TCATCCATAAACACACAAATATCCCT 58.646 34.615 0.00 0.00 0.00 4.20
3442 3849 8.498575 TCATCCATAAACACACAAATATCCCTA 58.501 33.333 0.00 0.00 0.00 3.53
3443 3850 8.786898 CATCCATAAACACACAAATATCCCTAG 58.213 37.037 0.00 0.00 0.00 3.02
3444 3851 7.867921 TCCATAAACACACAAATATCCCTAGT 58.132 34.615 0.00 0.00 0.00 2.57
3445 3852 8.994500 TCCATAAACACACAAATATCCCTAGTA 58.006 33.333 0.00 0.00 0.00 1.82
3446 3853 9.052759 CCATAAACACACAAATATCCCTAGTAC 57.947 37.037 0.00 0.00 0.00 2.73
3447 3854 9.607988 CATAAACACACAAATATCCCTAGTACA 57.392 33.333 0.00 0.00 0.00 2.90
3449 3856 7.916914 AACACACAAATATCCCTAGTACAAC 57.083 36.000 0.00 0.00 0.00 3.32
3450 3857 7.011499 ACACACAAATATCCCTAGTACAACA 57.989 36.000 0.00 0.00 0.00 3.33
3451 3858 7.455058 ACACACAAATATCCCTAGTACAACAA 58.545 34.615 0.00 0.00 0.00 2.83
3452 3859 8.107095 ACACACAAATATCCCTAGTACAACAAT 58.893 33.333 0.00 0.00 0.00 2.71
3453 3860 9.607988 CACACAAATATCCCTAGTACAACAATA 57.392 33.333 0.00 0.00 0.00 1.90
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 7.438459 CCATATAGCTAGCGAAAGTTGTTTAGT 59.562 37.037 9.55 0.00 0.00 2.24
68 69 7.095607 CCCATATAGCTAGCGAAAGTTGTTTAG 60.096 40.741 9.55 0.00 0.00 1.85
69 70 6.704493 CCCATATAGCTAGCGAAAGTTGTTTA 59.296 38.462 9.55 0.00 0.00 2.01
74 75 4.589374 AGACCCATATAGCTAGCGAAAGTT 59.411 41.667 9.55 0.00 0.00 2.66
75 76 4.153411 AGACCCATATAGCTAGCGAAAGT 58.847 43.478 9.55 1.78 0.00 2.66
112 113 0.603439 GTGGCATTTGCAAACCCTGG 60.603 55.000 23.59 10.69 44.36 4.45
120 121 0.966875 CAGCTAGGGTGGCATTTGCA 60.967 55.000 4.74 0.00 44.36 4.08
129 130 2.271800 GAACGTTCATCAGCTAGGGTG 58.728 52.381 23.12 0.00 0.00 4.61
141 142 0.739462 CCATAGCTGGCGAACGTTCA 60.739 55.000 26.71 8.47 35.23 3.18
179 180 6.515272 TTTTTAGAGATCCATGCAACCTTC 57.485 37.500 0.00 0.00 0.00 3.46
228 233 9.651718 CATTTTCTAGCGAAGGATTAAATGTAC 57.348 33.333 0.00 0.00 0.00 2.90
233 238 6.751514 TGCATTTTCTAGCGAAGGATTAAA 57.248 33.333 0.00 0.00 0.00 1.52
291 296 0.669619 TTCGGCTACAGTGTCGACAA 59.330 50.000 21.95 3.28 0.00 3.18
308 313 0.721718 CGATTCAACTCGGTGGCTTC 59.278 55.000 0.00 0.00 35.03 3.86
309 314 0.320374 TCGATTCAACTCGGTGGCTT 59.680 50.000 0.00 0.00 39.13 4.35
328 337 1.355720 CCTCCAAGTCCTTTCCATGGT 59.644 52.381 12.58 0.00 32.90 3.55
359 369 1.739667 GGTTGGTGAAGGGTGCAAC 59.260 57.895 0.00 0.00 0.00 4.17
511 569 1.609072 TCATGCAGTAGCTACGCTAGG 59.391 52.381 28.21 20.78 42.11 3.02
522 580 1.205893 TGCACGTACCATCATGCAGTA 59.794 47.619 0.00 0.00 42.92 2.74
531 589 1.202533 GCCTCTACATGCACGTACCAT 60.203 52.381 0.00 0.00 0.00 3.55
622 960 1.556564 CGGCGTATGAACAGTAGTGG 58.443 55.000 0.00 0.00 0.00 4.00
624 962 0.179119 GCCGGCGTATGAACAGTAGT 60.179 55.000 12.58 0.00 0.00 2.73
806 1144 3.684103 TTTGTGTCCGTTGCAAAGTAG 57.316 42.857 11.48 0.00 0.00 2.57
810 1148 3.849911 TGAATTTTGTGTCCGTTGCAAA 58.150 36.364 0.00 0.00 0.00 3.68
817 1155 1.068610 ACGCCATGAATTTTGTGTCCG 60.069 47.619 0.00 0.00 0.00 4.79
820 1158 1.068281 TGCACGCCATGAATTTTGTGT 59.932 42.857 0.00 0.00 0.00 3.72
822 1160 1.068281 TGTGCACGCCATGAATTTTGT 59.932 42.857 13.13 0.00 0.00 2.83
823 1161 1.780806 TGTGCACGCCATGAATTTTG 58.219 45.000 13.13 0.00 0.00 2.44
824 1162 2.288948 ACATGTGCACGCCATGAATTTT 60.289 40.909 19.39 0.00 41.78 1.82
941 1283 9.288576 TCTTGAATGTTTTAGACACTGATGATT 57.711 29.630 0.00 0.00 42.04 2.57
942 1284 8.853077 TCTTGAATGTTTTAGACACTGATGAT 57.147 30.769 0.00 0.00 42.04 2.45
943 1285 8.150296 TCTCTTGAATGTTTTAGACACTGATGA 58.850 33.333 0.00 0.00 42.04 2.92
944 1286 8.315391 TCTCTTGAATGTTTTAGACACTGATG 57.685 34.615 0.00 0.00 42.04 3.07
950 1292 5.062183 CGCGATCTCTTGAATGTTTTAGACA 59.938 40.000 0.00 0.00 43.71 3.41
954 1296 5.407502 TCTCGCGATCTCTTGAATGTTTTA 58.592 37.500 10.36 0.00 0.00 1.52
987 1329 4.444838 TCCATGTCCGTTCGGCCG 62.445 66.667 22.12 22.12 0.00 6.13
989 1331 1.144057 ATCTCCATGTCCGTTCGGC 59.856 57.895 6.35 2.90 0.00 5.54
991 1333 1.154205 GCCATCTCCATGTCCGTTCG 61.154 60.000 0.00 0.00 0.00 3.95
1728 2085 1.606480 CGGAAGAAGCAGTTGAGCAGA 60.606 52.381 0.00 0.00 36.85 4.26
1852 2209 3.283303 GGCCAAATTGTAGCCGCA 58.717 55.556 0.00 0.00 36.84 5.69
2046 2403 0.036388 CGCCTTGGACCTTCTTGCTA 60.036 55.000 0.00 0.00 0.00 3.49
2463 2846 1.268896 CCATGCACTAGGTACGTACGG 60.269 57.143 21.06 13.54 0.00 4.02
2486 2869 0.181350 CAGGAGCCCAATCACCCTAC 59.819 60.000 0.00 0.00 0.00 3.18
2487 2870 0.988145 CCAGGAGCCCAATCACCCTA 60.988 60.000 0.00 0.00 0.00 3.53
2494 2877 4.526102 TCCATCCAGGAGCCCAAT 57.474 55.556 0.00 0.00 43.07 3.16
2514 2897 3.281727 TGCAAACAAACAGTCTCCTCT 57.718 42.857 0.00 0.00 0.00 3.69
2522 2905 1.847999 CTCGCACTTGCAAACAAACAG 59.152 47.619 0.00 0.00 42.21 3.16
2525 2908 1.098869 TCCTCGCACTTGCAAACAAA 58.901 45.000 0.00 0.00 42.21 2.83
2538 2921 1.014352 ACAAACAACACTGTCCTCGC 58.986 50.000 0.00 0.00 33.45 5.03
2566 2949 6.583160 CAAGCAAATTGAAAGTACGTACGTA 58.417 36.000 23.60 23.60 41.83 3.57
2567 2950 5.437263 CAAGCAAATTGAAAGTACGTACGT 58.563 37.500 25.98 25.98 41.83 3.57
2568 2951 4.317291 GCAAGCAAATTGAAAGTACGTACG 59.683 41.667 19.49 15.01 41.83 3.67
2569 2952 5.449304 AGCAAGCAAATTGAAAGTACGTAC 58.551 37.500 18.10 18.10 41.83 3.67
2570 2953 5.682943 AGCAAGCAAATTGAAAGTACGTA 57.317 34.783 0.00 0.00 41.83 3.57
2571 2954 4.568152 AGCAAGCAAATTGAAAGTACGT 57.432 36.364 0.00 0.00 41.83 3.57
2577 2960 3.557228 ACCCAAGCAAGCAAATTGAAA 57.443 38.095 0.00 0.00 41.83 2.69
2582 2965 0.760572 AGCAACCCAAGCAAGCAAAT 59.239 45.000 0.00 0.00 0.00 2.32
2587 2970 2.863704 GCAACTAAGCAACCCAAGCAAG 60.864 50.000 0.00 0.00 0.00 4.01
2594 2977 1.953686 TCAACAGCAACTAAGCAACCC 59.046 47.619 0.00 0.00 36.85 4.11
2596 2979 3.058914 ACGATCAACAGCAACTAAGCAAC 60.059 43.478 0.00 0.00 36.85 4.17
2605 2988 0.318360 ACGTCGACGATCAACAGCAA 60.318 50.000 41.52 0.00 43.02 3.91
2606 2989 0.728129 GACGTCGACGATCAACAGCA 60.728 55.000 41.52 0.00 43.02 4.41
2607 2990 1.721257 CGACGTCGACGATCAACAGC 61.721 60.000 41.52 18.34 43.02 4.40
2608 2991 0.179233 TCGACGTCGACGATCAACAG 60.179 55.000 41.52 22.46 44.22 3.16
2609 2992 0.179233 CTCGACGTCGACGATCAACA 60.179 55.000 41.52 19.48 44.22 3.33
2610 2993 0.179230 ACTCGACGTCGACGATCAAC 60.179 55.000 41.52 23.73 44.22 3.18
2611 2994 0.094216 GACTCGACGTCGACGATCAA 59.906 55.000 41.52 20.41 44.22 2.57
2612 2995 1.706301 GACTCGACGTCGACGATCA 59.294 57.895 41.52 22.89 44.22 2.92
2613 2996 4.549135 GACTCGACGTCGACGATC 57.451 61.111 41.52 30.37 44.22 3.69
2620 3003 1.469917 TGAAACAACGACTCGACGTC 58.530 50.000 5.18 5.18 45.83 4.34
2622 3005 1.055891 CGATGAAACAACGACTCGACG 59.944 52.381 5.20 0.00 31.46 5.12
2623 3006 2.049228 ACGATGAAACAACGACTCGAC 58.951 47.619 5.20 0.00 33.96 4.20
2624 3007 2.410785 ACGATGAAACAACGACTCGA 57.589 45.000 5.20 0.00 33.96 4.04
2625 3008 3.485633 TCTACGATGAAACAACGACTCG 58.514 45.455 8.23 0.00 33.96 4.18
2626 3009 3.301116 GCTCTACGATGAAACAACGACTC 59.699 47.826 8.23 0.00 33.96 3.36
2627 3010 3.243336 GCTCTACGATGAAACAACGACT 58.757 45.455 8.23 0.00 33.96 4.18
2628 3011 3.619751 GCTCTACGATGAAACAACGAC 57.380 47.619 8.23 0.00 33.96 4.34
2641 3024 2.663334 CGAGCTTATTCTCCGCTCTACG 60.663 54.545 8.60 0.00 45.95 3.51
2642 3025 2.350964 CCGAGCTTATTCTCCGCTCTAC 60.351 54.545 8.60 0.00 45.95 2.59
2643 3026 1.880675 CCGAGCTTATTCTCCGCTCTA 59.119 52.381 8.60 0.00 45.95 2.43
2644 3027 0.671251 CCGAGCTTATTCTCCGCTCT 59.329 55.000 8.60 0.00 45.95 4.09
2645 3028 0.669077 TCCGAGCTTATTCTCCGCTC 59.331 55.000 0.00 0.00 44.98 5.03
2646 3029 1.112113 TTCCGAGCTTATTCTCCGCT 58.888 50.000 0.00 0.00 36.57 5.52
2647 3030 1.209998 GTTCCGAGCTTATTCTCCGC 58.790 55.000 0.00 0.00 0.00 5.54
2648 3031 1.409427 AGGTTCCGAGCTTATTCTCCG 59.591 52.381 0.00 0.00 0.00 4.63
2649 3032 2.224090 GGAGGTTCCGAGCTTATTCTCC 60.224 54.545 0.00 0.00 32.79 3.71
2650 3033 2.431057 TGGAGGTTCCGAGCTTATTCTC 59.569 50.000 0.00 0.00 40.17 2.87
2651 3034 2.467880 TGGAGGTTCCGAGCTTATTCT 58.532 47.619 0.00 0.00 40.17 2.40
2652 3035 2.981859 TGGAGGTTCCGAGCTTATTC 57.018 50.000 0.00 0.00 40.17 1.75
2653 3036 3.041946 AGATGGAGGTTCCGAGCTTATT 58.958 45.455 0.00 0.00 40.17 1.40
2654 3037 2.366916 CAGATGGAGGTTCCGAGCTTAT 59.633 50.000 0.00 0.00 40.17 1.73
2655 3038 1.757118 CAGATGGAGGTTCCGAGCTTA 59.243 52.381 0.00 0.00 40.17 3.09
2656 3039 0.539051 CAGATGGAGGTTCCGAGCTT 59.461 55.000 0.00 0.00 40.17 3.74
2657 3040 1.333636 CCAGATGGAGGTTCCGAGCT 61.334 60.000 0.00 0.00 40.17 4.09
2658 3041 1.144936 CCAGATGGAGGTTCCGAGC 59.855 63.158 0.00 0.00 40.17 5.03
2659 3042 1.826024 CCCAGATGGAGGTTCCGAG 59.174 63.158 0.00 0.00 40.17 4.63
2660 3043 2.367202 GCCCAGATGGAGGTTCCGA 61.367 63.158 0.00 0.00 40.17 4.55
2661 3044 1.915078 AAGCCCAGATGGAGGTTCCG 61.915 60.000 0.00 0.00 40.17 4.30
2662 3045 0.332972 AAAGCCCAGATGGAGGTTCC 59.667 55.000 0.00 0.00 37.39 3.62
2663 3046 1.283321 AGAAAGCCCAGATGGAGGTTC 59.717 52.381 0.00 0.91 37.39 3.62
2664 3047 1.283321 GAGAAAGCCCAGATGGAGGTT 59.717 52.381 0.00 0.00 37.39 3.50
2665 3048 0.915364 GAGAAAGCCCAGATGGAGGT 59.085 55.000 0.00 0.00 37.39 3.85
2666 3049 1.211456 AGAGAAAGCCCAGATGGAGG 58.789 55.000 0.00 0.00 37.39 4.30
2667 3050 4.703379 AATAGAGAAAGCCCAGATGGAG 57.297 45.455 0.00 0.00 37.39 3.86
2668 3051 5.456921 AAAATAGAGAAAGCCCAGATGGA 57.543 39.130 0.00 0.00 37.39 3.41
2669 3052 7.286316 ACAATAAAATAGAGAAAGCCCAGATGG 59.714 37.037 0.00 0.00 37.09 3.51
2670 3053 8.230472 ACAATAAAATAGAGAAAGCCCAGATG 57.770 34.615 0.00 0.00 0.00 2.90
2671 3054 9.343539 GTACAATAAAATAGAGAAAGCCCAGAT 57.656 33.333 0.00 0.00 0.00 2.90
2672 3055 8.548877 AGTACAATAAAATAGAGAAAGCCCAGA 58.451 33.333 0.00 0.00 0.00 3.86
2673 3056 8.738645 AGTACAATAAAATAGAGAAAGCCCAG 57.261 34.615 0.00 0.00 0.00 4.45
2674 3057 9.174166 GAAGTACAATAAAATAGAGAAAGCCCA 57.826 33.333 0.00 0.00 0.00 5.36
2675 3058 8.336080 CGAAGTACAATAAAATAGAGAAAGCCC 58.664 37.037 0.00 0.00 0.00 5.19
2676 3059 9.095065 TCGAAGTACAATAAAATAGAGAAAGCC 57.905 33.333 0.00 0.00 0.00 4.35
2687 3070 9.280174 AGGAAACAAGATCGAAGTACAATAAAA 57.720 29.630 0.00 0.00 0.00 1.52
2688 3071 8.717821 CAGGAAACAAGATCGAAGTACAATAAA 58.282 33.333 0.00 0.00 0.00 1.40
2689 3072 7.148474 GCAGGAAACAAGATCGAAGTACAATAA 60.148 37.037 0.00 0.00 0.00 1.40
2690 3073 6.312918 GCAGGAAACAAGATCGAAGTACAATA 59.687 38.462 0.00 0.00 0.00 1.90
2691 3074 5.122396 GCAGGAAACAAGATCGAAGTACAAT 59.878 40.000 0.00 0.00 0.00 2.71
2692 3075 4.451096 GCAGGAAACAAGATCGAAGTACAA 59.549 41.667 0.00 0.00 0.00 2.41
2693 3076 3.994392 GCAGGAAACAAGATCGAAGTACA 59.006 43.478 0.00 0.00 0.00 2.90
2694 3077 3.371285 GGCAGGAAACAAGATCGAAGTAC 59.629 47.826 0.00 0.00 0.00 2.73
2695 3078 3.260884 AGGCAGGAAACAAGATCGAAGTA 59.739 43.478 0.00 0.00 0.00 2.24
2696 3079 2.039084 AGGCAGGAAACAAGATCGAAGT 59.961 45.455 0.00 0.00 0.00 3.01
2697 3080 2.704572 AGGCAGGAAACAAGATCGAAG 58.295 47.619 0.00 0.00 0.00 3.79
2698 3081 2.859165 AGGCAGGAAACAAGATCGAA 57.141 45.000 0.00 0.00 0.00 3.71
2699 3082 2.859165 AAGGCAGGAAACAAGATCGA 57.141 45.000 0.00 0.00 0.00 3.59
2700 3083 2.159653 CGAAAGGCAGGAAACAAGATCG 60.160 50.000 0.00 0.00 0.00 3.69
2701 3084 2.814336 ACGAAAGGCAGGAAACAAGATC 59.186 45.455 0.00 0.00 0.00 2.75
2702 3085 2.814336 GACGAAAGGCAGGAAACAAGAT 59.186 45.455 0.00 0.00 40.66 2.40
2703 3086 2.218603 GACGAAAGGCAGGAAACAAGA 58.781 47.619 0.00 0.00 40.66 3.02
2704 3087 1.069906 CGACGAAAGGCAGGAAACAAG 60.070 52.381 0.00 0.00 41.50 3.16
2705 3088 0.941542 CGACGAAAGGCAGGAAACAA 59.058 50.000 0.00 0.00 41.50 2.83
2706 3089 0.882927 CCGACGAAAGGCAGGAAACA 60.883 55.000 0.00 0.00 41.50 2.83
2707 3090 0.601841 TCCGACGAAAGGCAGGAAAC 60.602 55.000 0.00 0.00 41.50 2.78
2708 3091 0.107081 TTCCGACGAAAGGCAGGAAA 59.893 50.000 0.00 0.00 44.64 3.13
2709 3092 1.749665 TTCCGACGAAAGGCAGGAA 59.250 52.632 0.00 0.00 45.13 3.36
2710 3093 0.108329 GATTCCGACGAAAGGCAGGA 60.108 55.000 0.00 0.00 41.50 3.86
2711 3094 1.090052 GGATTCCGACGAAAGGCAGG 61.090 60.000 0.00 0.00 41.50 4.85
2712 3095 0.391130 TGGATTCCGACGAAAGGCAG 60.391 55.000 0.00 0.00 41.50 4.85
2713 3096 0.251916 ATGGATTCCGACGAAAGGCA 59.748 50.000 0.00 0.00 41.50 4.75
2714 3097 0.657840 CATGGATTCCGACGAAAGGC 59.342 55.000 0.00 0.00 0.00 4.35
2715 3098 1.299541 CCATGGATTCCGACGAAAGG 58.700 55.000 5.56 0.00 0.00 3.11
2716 3099 0.657840 GCCATGGATTCCGACGAAAG 59.342 55.000 18.40 0.00 0.00 2.62
2717 3100 1.087202 CGCCATGGATTCCGACGAAA 61.087 55.000 18.40 0.00 0.00 3.46
2718 3101 1.520564 CGCCATGGATTCCGACGAA 60.521 57.895 18.40 0.00 0.00 3.85
2719 3102 1.385756 TACGCCATGGATTCCGACGA 61.386 55.000 18.40 0.00 0.00 4.20
2720 3103 0.319555 ATACGCCATGGATTCCGACG 60.320 55.000 18.40 10.18 0.00 5.12
2721 3104 1.878953 AATACGCCATGGATTCCGAC 58.121 50.000 18.40 0.00 0.00 4.79
2722 3105 2.616376 CAAAATACGCCATGGATTCCGA 59.384 45.455 18.40 0.22 0.00 4.55
2723 3106 2.616376 TCAAAATACGCCATGGATTCCG 59.384 45.455 18.40 12.21 0.00 4.30
2724 3107 3.632145 AGTCAAAATACGCCATGGATTCC 59.368 43.478 18.40 0.00 0.00 3.01
2725 3108 4.096382 ACAGTCAAAATACGCCATGGATTC 59.904 41.667 18.40 0.00 0.00 2.52
2726 3109 4.016444 ACAGTCAAAATACGCCATGGATT 58.984 39.130 18.40 3.25 0.00 3.01
2727 3110 3.620488 ACAGTCAAAATACGCCATGGAT 58.380 40.909 18.40 4.85 0.00 3.41
2728 3111 3.066291 ACAGTCAAAATACGCCATGGA 57.934 42.857 18.40 0.00 0.00 3.41
2729 3112 3.848272 AACAGTCAAAATACGCCATGG 57.152 42.857 7.63 7.63 0.00 3.66
2730 3113 5.218885 TGAAAACAGTCAAAATACGCCATG 58.781 37.500 0.00 0.00 0.00 3.66
2731 3114 5.446143 TGAAAACAGTCAAAATACGCCAT 57.554 34.783 0.00 0.00 0.00 4.40
2732 3115 4.902443 TGAAAACAGTCAAAATACGCCA 57.098 36.364 0.00 0.00 0.00 5.69
2787 3170 9.869757 GCCCTAAATTGTTAATGTAAACTTCAT 57.130 29.630 0.00 0.00 0.00 2.57
2788 3171 8.861086 TGCCCTAAATTGTTAATGTAAACTTCA 58.139 29.630 0.00 0.00 0.00 3.02
2789 3172 9.869757 ATGCCCTAAATTGTTAATGTAAACTTC 57.130 29.630 0.00 0.00 0.00 3.01
2790 3173 9.869757 GATGCCCTAAATTGTTAATGTAAACTT 57.130 29.630 0.00 0.00 0.00 2.66
2791 3174 9.255029 AGATGCCCTAAATTGTTAATGTAAACT 57.745 29.630 0.00 0.00 0.00 2.66
2792 3175 9.516314 GAGATGCCCTAAATTGTTAATGTAAAC 57.484 33.333 0.00 0.00 0.00 2.01
2793 3176 9.474313 AGAGATGCCCTAAATTGTTAATGTAAA 57.526 29.630 0.00 0.00 0.00 2.01
2796 3179 8.903820 GTTAGAGATGCCCTAAATTGTTAATGT 58.096 33.333 0.00 0.00 0.00 2.71
2797 3180 8.070171 CGTTAGAGATGCCCTAAATTGTTAATG 58.930 37.037 0.00 0.00 0.00 1.90
2798 3181 7.255139 GCGTTAGAGATGCCCTAAATTGTTAAT 60.255 37.037 0.00 0.00 34.03 1.40
2799 3182 6.037830 GCGTTAGAGATGCCCTAAATTGTTAA 59.962 38.462 0.00 0.00 34.03 2.01
2800 3183 5.526111 GCGTTAGAGATGCCCTAAATTGTTA 59.474 40.000 0.00 0.00 34.03 2.41
2801 3184 4.335594 GCGTTAGAGATGCCCTAAATTGTT 59.664 41.667 0.00 0.00 34.03 2.83
2802 3185 3.877508 GCGTTAGAGATGCCCTAAATTGT 59.122 43.478 0.00 0.00 34.03 2.71
2803 3186 3.059597 CGCGTTAGAGATGCCCTAAATTG 60.060 47.826 0.00 0.00 36.93 2.32
2804 3187 3.131396 CGCGTTAGAGATGCCCTAAATT 58.869 45.455 0.00 0.00 36.93 1.82
2805 3188 2.102588 ACGCGTTAGAGATGCCCTAAAT 59.897 45.455 5.58 0.00 36.93 1.40
2806 3189 1.479323 ACGCGTTAGAGATGCCCTAAA 59.521 47.619 5.58 0.00 36.93 1.85
2807 3190 1.108776 ACGCGTTAGAGATGCCCTAA 58.891 50.000 5.58 0.00 36.93 2.69
2808 3191 1.605710 GTACGCGTTAGAGATGCCCTA 59.394 52.381 20.78 0.00 36.93 3.53
2809 3192 0.384669 GTACGCGTTAGAGATGCCCT 59.615 55.000 20.78 0.00 36.93 5.19
2810 3193 0.596859 GGTACGCGTTAGAGATGCCC 60.597 60.000 20.78 0.00 36.93 5.36
2811 3194 0.596859 GGGTACGCGTTAGAGATGCC 60.597 60.000 20.78 2.52 36.93 4.40
2812 3195 0.384669 AGGGTACGCGTTAGAGATGC 59.615 55.000 20.78 0.00 36.90 3.91
2813 3196 2.865343 AAGGGTACGCGTTAGAGATG 57.135 50.000 20.78 0.00 0.00 2.90
2814 3197 4.989279 TTTAAGGGTACGCGTTAGAGAT 57.011 40.909 20.78 2.42 0.00 2.75
2815 3198 4.485163 GTTTTAAGGGTACGCGTTAGAGA 58.515 43.478 20.78 0.00 0.00 3.10
2816 3199 3.301642 CGTTTTAAGGGTACGCGTTAGAG 59.698 47.826 20.78 0.00 0.00 2.43
2817 3200 3.241701 CGTTTTAAGGGTACGCGTTAGA 58.758 45.455 20.78 0.00 0.00 2.10
2818 3201 2.345341 CCGTTTTAAGGGTACGCGTTAG 59.655 50.000 20.78 0.00 34.16 2.34
2819 3202 2.029828 TCCGTTTTAAGGGTACGCGTTA 60.030 45.455 20.78 0.00 35.51 3.18
2820 3203 1.147473 CCGTTTTAAGGGTACGCGTT 58.853 50.000 20.78 0.00 34.16 4.84
2821 3204 0.316841 TCCGTTTTAAGGGTACGCGT 59.683 50.000 19.17 19.17 35.51 6.01
2822 3205 0.715551 GTCCGTTTTAAGGGTACGCG 59.284 55.000 3.53 3.53 35.51 6.01
2823 3206 1.460743 GTGTCCGTTTTAAGGGTACGC 59.539 52.381 0.77 0.77 35.51 4.42
2824 3207 2.476241 GTGTGTCCGTTTTAAGGGTACG 59.524 50.000 1.56 0.00 35.51 3.67
2825 3208 3.732212 AGTGTGTCCGTTTTAAGGGTAC 58.268 45.455 1.56 3.72 35.51 3.34
2826 3209 5.622007 CGATAGTGTGTCCGTTTTAAGGGTA 60.622 44.000 1.56 0.00 35.51 3.69
2827 3210 4.572909 GATAGTGTGTCCGTTTTAAGGGT 58.427 43.478 1.56 0.00 35.51 4.34
2828 3211 3.615496 CGATAGTGTGTCCGTTTTAAGGG 59.385 47.826 0.00 0.00 35.32 3.95
2829 3212 3.615496 CCGATAGTGTGTCCGTTTTAAGG 59.385 47.826 0.00 0.00 0.00 2.69
2830 3213 4.487948 TCCGATAGTGTGTCCGTTTTAAG 58.512 43.478 0.00 0.00 0.00 1.85
2831 3214 4.517952 TCCGATAGTGTGTCCGTTTTAA 57.482 40.909 0.00 0.00 0.00 1.52
2832 3215 4.082081 ACATCCGATAGTGTGTCCGTTTTA 60.082 41.667 0.00 0.00 0.00 1.52
2833 3216 3.259064 CATCCGATAGTGTGTCCGTTTT 58.741 45.455 0.00 0.00 0.00 2.43
2834 3217 2.232941 ACATCCGATAGTGTGTCCGTTT 59.767 45.455 0.00 0.00 0.00 3.60
2835 3218 1.822990 ACATCCGATAGTGTGTCCGTT 59.177 47.619 0.00 0.00 0.00 4.44
2836 3219 1.134367 CACATCCGATAGTGTGTCCGT 59.866 52.381 0.00 0.00 40.54 4.69
2837 3220 1.404035 TCACATCCGATAGTGTGTCCG 59.596 52.381 5.53 0.00 44.55 4.79
2838 3221 3.520290 TTCACATCCGATAGTGTGTCC 57.480 47.619 5.53 0.00 44.55 4.02
2839 3222 3.731216 CGATTCACATCCGATAGTGTGTC 59.269 47.826 5.53 8.30 44.55 3.67
2840 3223 3.706698 CGATTCACATCCGATAGTGTGT 58.293 45.455 5.53 0.00 44.55 3.72
2841 3224 2.472861 GCGATTCACATCCGATAGTGTG 59.527 50.000 9.40 0.00 45.37 3.82
2842 3225 2.743938 GCGATTCACATCCGATAGTGT 58.256 47.619 9.40 0.00 37.07 3.55
2843 3226 1.716050 CGCGATTCACATCCGATAGTG 59.284 52.381 0.00 0.00 37.10 2.74
2844 3227 1.337071 ACGCGATTCACATCCGATAGT 59.663 47.619 15.93 0.00 31.34 2.12
2845 3228 2.051879 ACGCGATTCACATCCGATAG 57.948 50.000 15.93 0.00 31.34 2.08
2846 3229 2.390938 GAACGCGATTCACATCCGATA 58.609 47.619 15.93 0.00 37.27 2.92
2847 3230 1.209128 GAACGCGATTCACATCCGAT 58.791 50.000 15.93 0.00 37.27 4.18
2848 3231 1.137459 CGAACGCGATTCACATCCGA 61.137 55.000 15.93 0.00 40.82 4.55
2849 3232 1.269810 CGAACGCGATTCACATCCG 59.730 57.895 15.93 0.00 40.82 4.18
2850 3233 0.804544 TCCGAACGCGATTCACATCC 60.805 55.000 15.93 0.00 40.82 3.51
2851 3234 1.071239 CATCCGAACGCGATTCACATC 60.071 52.381 15.93 0.00 40.82 3.06
2852 3235 0.930310 CATCCGAACGCGATTCACAT 59.070 50.000 15.93 4.87 40.82 3.21
2853 3236 1.692148 GCATCCGAACGCGATTCACA 61.692 55.000 15.93 2.60 40.82 3.58
2854 3237 1.012234 GCATCCGAACGCGATTCAC 60.012 57.895 15.93 0.00 40.82 3.18
2855 3238 2.171079 GGCATCCGAACGCGATTCA 61.171 57.895 15.93 0.00 40.82 2.57
2856 3239 1.429148 AAGGCATCCGAACGCGATTC 61.429 55.000 15.93 12.21 40.82 2.52
2857 3240 1.024579 AAAGGCATCCGAACGCGATT 61.025 50.000 15.93 2.74 40.82 3.34
2858 3241 1.449601 AAAGGCATCCGAACGCGAT 60.450 52.632 15.93 0.00 40.82 4.58
2859 3242 2.047655 AAAGGCATCCGAACGCGA 60.048 55.556 15.93 0.00 40.82 5.87
2860 3243 2.098298 CAAAGGCATCCGAACGCG 59.902 61.111 3.53 3.53 37.24 6.01
2861 3244 2.202479 GCAAAGGCATCCGAACGC 60.202 61.111 0.00 0.00 40.72 4.84
2862 3245 2.098298 CGCAAAGGCATCCGAACG 59.902 61.111 0.00 0.00 41.24 3.95
2863 3246 2.038269 TCCGCAAAGGCATCCGAAC 61.038 57.895 0.00 0.00 41.24 3.95
2864 3247 2.038269 GTCCGCAAAGGCATCCGAA 61.038 57.895 0.00 0.00 41.24 4.30
2865 3248 2.435938 GTCCGCAAAGGCATCCGA 60.436 61.111 0.00 0.00 41.24 4.55
2866 3249 2.745884 TGTCCGCAAAGGCATCCG 60.746 61.111 0.00 0.00 41.24 4.18
2867 3250 2.877691 GTGTCCGCAAAGGCATCC 59.122 61.111 0.00 0.00 41.24 3.51
2868 3251 1.369091 ATCGTGTCCGCAAAGGCATC 61.369 55.000 0.00 0.00 41.24 3.91
2869 3252 0.107897 TATCGTGTCCGCAAAGGCAT 60.108 50.000 0.00 0.00 41.24 4.40
2870 3253 1.017177 GTATCGTGTCCGCAAAGGCA 61.017 55.000 0.00 0.00 41.24 4.75
2871 3254 1.017177 TGTATCGTGTCCGCAAAGGC 61.017 55.000 0.00 0.00 40.77 4.35
2872 3255 0.719465 GTGTATCGTGTCCGCAAAGG 59.281 55.000 0.00 0.00 42.97 3.11
2873 3256 0.365523 CGTGTATCGTGTCCGCAAAG 59.634 55.000 0.00 0.00 34.52 2.77
2874 3257 0.039346 TCGTGTATCGTGTCCGCAAA 60.039 50.000 0.00 0.00 40.80 3.68
2875 3258 0.455464 CTCGTGTATCGTGTCCGCAA 60.455 55.000 0.00 0.00 40.80 4.85
2876 3259 1.135939 CTCGTGTATCGTGTCCGCA 59.864 57.895 0.00 0.00 40.80 5.69
2877 3260 2.222217 GCTCGTGTATCGTGTCCGC 61.222 63.158 0.00 0.00 40.80 5.54
2878 3261 1.585521 GGCTCGTGTATCGTGTCCG 60.586 63.158 0.00 0.00 40.80 4.79
2879 3262 1.585521 CGGCTCGTGTATCGTGTCC 60.586 63.158 0.00 0.00 40.80 4.02
2880 3263 1.585521 CCGGCTCGTGTATCGTGTC 60.586 63.158 0.00 0.00 40.80 3.67
2881 3264 2.488355 CCGGCTCGTGTATCGTGT 59.512 61.111 0.00 0.00 40.80 4.49
2882 3265 2.954868 GCCGGCTCGTGTATCGTG 60.955 66.667 22.15 0.00 40.80 4.35
2883 3266 4.203076 GGCCGGCTCGTGTATCGT 62.203 66.667 28.56 0.00 40.80 3.73
2884 3267 3.499929 ATGGCCGGCTCGTGTATCG 62.500 63.158 28.56 0.00 41.41 2.92
2885 3268 1.664965 GATGGCCGGCTCGTGTATC 60.665 63.158 28.56 15.77 0.00 2.24
2886 3269 2.421739 GATGGCCGGCTCGTGTAT 59.578 61.111 28.56 11.16 0.00 2.29
2887 3270 3.845259 GGATGGCCGGCTCGTGTA 61.845 66.667 28.56 6.45 0.00 2.90
2889 3272 4.776322 TTGGATGGCCGGCTCGTG 62.776 66.667 28.56 0.00 36.79 4.35
2890 3273 4.778143 GTTGGATGGCCGGCTCGT 62.778 66.667 28.56 17.88 36.79 4.18
2897 3280 1.249407 TTAAACACGGTTGGATGGCC 58.751 50.000 0.00 0.00 0.00 5.36
2898 3281 2.668250 GTTTAAACACGGTTGGATGGC 58.332 47.619 13.51 0.00 0.00 4.40
2899 3282 2.291190 ACGTTTAAACACGGTTGGATGG 59.709 45.455 18.07 0.23 44.82 3.51
2900 3283 3.547601 GACGTTTAAACACGGTTGGATG 58.452 45.455 18.07 0.71 44.82 3.51
2901 3284 2.549329 GGACGTTTAAACACGGTTGGAT 59.451 45.455 18.07 0.00 44.82 3.41
2902 3285 1.939255 GGACGTTTAAACACGGTTGGA 59.061 47.619 18.07 0.00 44.82 3.53
2903 3286 1.941975 AGGACGTTTAAACACGGTTGG 59.058 47.619 18.07 2.76 44.82 3.77
2904 3287 2.032636 GGAGGACGTTTAAACACGGTTG 60.033 50.000 18.07 3.44 44.82 3.77
2905 3288 2.212652 GGAGGACGTTTAAACACGGTT 58.787 47.619 18.07 0.00 44.82 4.44
2906 3289 1.541015 GGGAGGACGTTTAAACACGGT 60.541 52.381 18.07 7.98 44.82 4.83
2907 3290 1.150827 GGGAGGACGTTTAAACACGG 58.849 55.000 18.07 4.82 44.82 4.94
2908 3291 2.159327 AGGGAGGACGTTTAAACACG 57.841 50.000 18.07 8.55 46.04 4.49
2909 3292 3.208594 ACAAGGGAGGACGTTTAAACAC 58.791 45.455 18.07 10.77 0.00 3.32
2910 3293 3.564053 ACAAGGGAGGACGTTTAAACA 57.436 42.857 18.07 0.00 0.00 2.83
2911 3294 4.906065 AAACAAGGGAGGACGTTTAAAC 57.094 40.909 8.35 8.35 30.11 2.01
2912 3295 5.918426 AAAAACAAGGGAGGACGTTTAAA 57.082 34.783 0.00 0.00 31.59 1.52
2935 3318 2.227194 GAAGGGCGGACTTGAGAAAAA 58.773 47.619 0.00 0.00 0.00 1.94
2936 3319 1.876416 CGAAGGGCGGACTTGAGAAAA 60.876 52.381 0.00 0.00 36.03 2.29
2937 3320 0.320421 CGAAGGGCGGACTTGAGAAA 60.320 55.000 0.00 0.00 36.03 2.52
2938 3321 1.292223 CGAAGGGCGGACTTGAGAA 59.708 57.895 0.00 0.00 36.03 2.87
2939 3322 2.970639 CGAAGGGCGGACTTGAGA 59.029 61.111 0.00 0.00 36.03 3.27
2952 3335 1.826327 CACAAACAACACTGCCGAAG 58.174 50.000 0.00 0.00 0.00 3.79
2953 3336 0.179150 GCACAAACAACACTGCCGAA 60.179 50.000 0.00 0.00 0.00 4.30
2954 3337 1.431440 GCACAAACAACACTGCCGA 59.569 52.632 0.00 0.00 0.00 5.54
2955 3338 1.588667 GGCACAAACAACACTGCCG 60.589 57.895 0.00 0.00 39.92 5.69
2956 3339 4.418337 GGCACAAACAACACTGCC 57.582 55.556 0.00 0.00 42.41 4.85
2957 3340 1.280066 CAAGGCACAAACAACACTGC 58.720 50.000 0.00 0.00 0.00 4.40
2958 3341 1.280066 GCAAGGCACAAACAACACTG 58.720 50.000 0.00 0.00 0.00 3.66
2959 3342 0.175531 GGCAAGGCACAAACAACACT 59.824 50.000 0.00 0.00 0.00 3.55
2960 3343 1.145162 CGGCAAGGCACAAACAACAC 61.145 55.000 0.00 0.00 0.00 3.32
2961 3344 1.140589 CGGCAAGGCACAAACAACA 59.859 52.632 0.00 0.00 0.00 3.33
2962 3345 1.140804 ACGGCAAGGCACAAACAAC 59.859 52.632 0.00 0.00 0.00 3.32
2963 3346 1.140589 CACGGCAAGGCACAAACAA 59.859 52.632 0.00 0.00 0.00 2.83
2964 3347 2.804167 CACGGCAAGGCACAAACA 59.196 55.556 0.00 0.00 0.00 2.83
2965 3348 2.658268 GCACGGCAAGGCACAAAC 60.658 61.111 0.00 0.00 0.00 2.93
2966 3349 4.263209 CGCACGGCAAGGCACAAA 62.263 61.111 0.00 0.00 0.00 2.83
2968 3351 4.610714 TACGCACGGCAAGGCACA 62.611 61.111 0.00 0.00 0.00 4.57
2969 3352 4.084888 GTACGCACGGCAAGGCAC 62.085 66.667 0.00 0.00 0.00 5.01
3011 3394 0.178992 AACAGCAACTAGGCAAGCCA 60.179 50.000 14.40 0.00 38.92 4.75
3012 3395 0.242017 CAACAGCAACTAGGCAAGCC 59.758 55.000 2.02 2.02 35.83 4.35
3013 3396 1.238439 TCAACAGCAACTAGGCAAGC 58.762 50.000 0.00 0.00 35.83 4.01
3014 3397 2.094894 CGATCAACAGCAACTAGGCAAG 59.905 50.000 0.00 0.00 35.83 4.01
3015 3398 2.076100 CGATCAACAGCAACTAGGCAA 58.924 47.619 0.00 0.00 35.83 4.52
3016 3399 1.001974 ACGATCAACAGCAACTAGGCA 59.998 47.619 0.00 0.00 35.83 4.75
3017 3400 1.661112 GACGATCAACAGCAACTAGGC 59.339 52.381 0.00 0.00 0.00 3.93
3018 3401 1.920574 CGACGATCAACAGCAACTAGG 59.079 52.381 0.00 0.00 0.00 3.02
3019 3402 2.848887 CTCGACGATCAACAGCAACTAG 59.151 50.000 0.00 0.00 0.00 2.57
3058 3450 1.675714 CGCTCTACCAATCACCTTGCA 60.676 52.381 0.00 0.00 33.20 4.08
3059 3451 1.009829 CGCTCTACCAATCACCTTGC 58.990 55.000 0.00 0.00 33.20 4.01
3060 3452 1.207089 TCCGCTCTACCAATCACCTTG 59.793 52.381 0.00 0.00 34.42 3.61
3083 3475 1.855360 GAAGGTTGCGATCGAGCTTAG 59.145 52.381 21.57 0.00 42.71 2.18
3092 3484 0.620556 ACCCAGATGAAGGTTGCGAT 59.379 50.000 0.00 0.00 29.94 4.58
3093 3485 0.400213 AACCCAGATGAAGGTTGCGA 59.600 50.000 0.00 0.00 44.70 5.10
3094 3486 1.247567 AAACCCAGATGAAGGTTGCG 58.752 50.000 0.00 0.00 45.68 4.85
3095 3487 2.893489 AGAAAACCCAGATGAAGGTTGC 59.107 45.455 0.00 0.00 45.68 4.17
3096 3488 4.022849 GTGAGAAAACCCAGATGAAGGTTG 60.023 45.833 0.00 0.00 45.68 3.77
3142 3537 0.323629 TCCGAAACGAAAGGCAGGAT 59.676 50.000 0.00 0.00 0.00 3.24
3184 3579 8.558700 GCAAACAATTTATGACCAAAGTTGAAT 58.441 29.630 0.00 0.00 0.00 2.57
3223 3618 4.220382 TGCCCTGGTAATTTGAACTTCATG 59.780 41.667 0.00 0.00 0.00 3.07
3226 3621 4.706962 AGATGCCCTGGTAATTTGAACTTC 59.293 41.667 0.00 0.00 0.00 3.01
3263 3663 4.929808 AGCTGGATAGTGTGTTCGTTTTAG 59.070 41.667 0.00 0.00 0.00 1.85
3271 3671 3.195825 GGTCTGTAGCTGGATAGTGTGTT 59.804 47.826 0.00 0.00 0.00 3.32
3323 3729 2.029844 GATTAGATGGCCGGCTCGC 61.030 63.158 28.56 15.42 0.00 5.03
3328 3734 1.813513 GGACATGATTAGATGGCCGG 58.186 55.000 0.00 0.00 41.83 6.13
3331 3737 4.640771 TTAGGGGACATGATTAGATGGC 57.359 45.455 0.00 0.00 0.00 4.40
3337 3743 3.497763 CGGGCATTTAGGGGACATGATTA 60.498 47.826 0.00 0.00 0.00 1.75
3381 3788 9.686683 ATTTCCTATAGCTATTTTGAGTGTTGT 57.313 29.630 12.39 0.00 0.00 3.32
3408 3815 8.954950 TTGTGTGTTTATGGATGAATTTTGTT 57.045 26.923 0.00 0.00 0.00 2.83
3409 3816 8.954950 TTTGTGTGTTTATGGATGAATTTTGT 57.045 26.923 0.00 0.00 0.00 2.83
3414 3821 8.641541 GGGATATTTGTGTGTTTATGGATGAAT 58.358 33.333 0.00 0.00 0.00 2.57
3415 3822 7.838696 AGGGATATTTGTGTGTTTATGGATGAA 59.161 33.333 0.00 0.00 0.00 2.57
3416 3823 7.353525 AGGGATATTTGTGTGTTTATGGATGA 58.646 34.615 0.00 0.00 0.00 2.92
3417 3824 7.587037 AGGGATATTTGTGTGTTTATGGATG 57.413 36.000 0.00 0.00 0.00 3.51
3418 3825 8.502738 ACTAGGGATATTTGTGTGTTTATGGAT 58.497 33.333 0.00 0.00 0.00 3.41
3419 3826 7.867921 ACTAGGGATATTTGTGTGTTTATGGA 58.132 34.615 0.00 0.00 0.00 3.41
3420 3827 9.052759 GTACTAGGGATATTTGTGTGTTTATGG 57.947 37.037 0.00 0.00 0.00 2.74
3421 3828 9.607988 TGTACTAGGGATATTTGTGTGTTTATG 57.392 33.333 0.00 0.00 0.00 1.90
3423 3830 9.439500 GTTGTACTAGGGATATTTGTGTGTTTA 57.561 33.333 0.00 0.00 0.00 2.01
3424 3831 7.940137 TGTTGTACTAGGGATATTTGTGTGTTT 59.060 33.333 0.00 0.00 0.00 2.83
3425 3832 7.455058 TGTTGTACTAGGGATATTTGTGTGTT 58.545 34.615 0.00 0.00 0.00 3.32
3426 3833 7.011499 TGTTGTACTAGGGATATTTGTGTGT 57.989 36.000 0.00 0.00 0.00 3.72
3427 3834 7.915293 TTGTTGTACTAGGGATATTTGTGTG 57.085 36.000 0.00 0.00 0.00 3.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.