>input_sequence_50998
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----------------------------------------------------------------ATGGAGATGGCGCACA
GAGACCACCTCCTCGCCGCCGTGCACGGCGTCCTCGGCGTCGCCGTCCTCATCCTGTGCCTCGTTGCCGAGCTGTCCGTC
CTCGTCTTCCGGCGGCACGCGG---CGCTGTACCTCCTCCCGGTCTGCGCGATGATGACGCACCTGTGGCGCTCCGGCCG
ACGTGCGGACA---------TCGGCCTGGTGGACTTCGCGTACCTGAAGCCGCCCCGCCGGCTGCGCGTCACCATCCCGG
GCCTGCTCGAGCACCTCCGCCTCATCGGCTGCTTCGACGACGGCAGCGTCGAGTTCATGTCCAGGGTCGTCGAGGACAGC
GGCATGGGCGACGAGACCTACTTTCCGCCGGCGCTGCACTATCTCCCGCCGTCCGCCACGCACGCCGACGCCGTCCAGGA
GGCGGGGATGCTCTTCTTCCCCACGCTCGACGAGCTGTTCGCTAAGACGGGCGTGCCGCCGTCCGCCGTCGGCGCGCTCG
TCGTCAACTGCAGCGGGTTCGGCCCTGCCCCGTCGCTCACCGCCATCATCGCCAACCGCTACCGCATGCCCAGCGACGTC
AAGACCTTCAACCTGTCCGGCATGGGGTGCGCCGCGGGCATTGTCGGCGTGGACGTCGCGAGGGGCGTCCTGAGAGCGCA
CGTGGGCGCCGTCGACTACGCCGTCGTCGTCAGCGCGGAGATCGTCACGATCGGGTGGTACAGAGGGAGGGACCGCAGCA
AGCTTCTGCTCAACTGCTTCTTCCGCACTGGCTGCGCCGCCGCGCTGCTGTCGAACACCGCATCGGCGGCAGCGCCGGTC
AAGTACCGGCTCGTCGCGCTGAAGCGCACGACCATTGCGGCCGACGACTGCGGCTACAATTTGGCCGTGAGGGAGGAGGA
CGACGAGGGCATCACCGGGTTCACCATCGGCCGCGGCCTCGGCCGTGTGTTCCGGGACCTCCTCCGCGCCCACCTCCCCG
GCTTCGGCGCCTCCATCCTCCCGTGGCACGAGAAGCTCCGCTACGCCGCCGCGCTCGTGCGATTCCACCGCCGCCGCCGG
AGTAGCAAGAAGGTCCAAGGCGGCGAAGGCCGCGTGGAG--------------------------GCGCCGAAGCCGAAC
TTCCTGGCGGCGGCGAGCCACTTCTGCCTGCCGTCGTCGGGGATGCCGAACATACGGAGGCTGGCGGAGGGGCTGGGGGT
GGGGGAGAGGGAGGCGGAGGCGGCGCTGGCGACGTTCCAGCGGTTCGGGAACCAGTCGGCGTCGTCGCTGTGGTACCAGC
TCGGGTACCACGAGGCGAGGGGGCGGGTCCGGCGGGGCGACCGCGTGTGGCAGCTCGGCATCGGGAGCGGGCCCAAGGCG
AGCAGCGCCCTGTGGGAGCGCGTCGCGGCGTACGGCGACGCCGCGGCGGCCGACGAGGGGCCGTGGGGCGACTGCGTCCT
CCGCTACCCGGCGAGGGCACCGGGCGCCCCGTTGGCTTGA----------------------------------------
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------------------------
>chr5D_1_TraesCS5D01G316100
TGTGATACAGAAATATGAAATTAAAATTTTGCAATCTTATTATCAATGAGAAACTGAAATAGTGAAAACTAAACAACTTT
CGCTAGCTATATGGGTCTACAAAAAATGCCATCCAGGGTTTGCAAATGCCACCCTAGCTGATGAACGTTCGCCAGCTATG
GGTGTCCACACCACACGTAGAAGGTTGCATGGATCTCTAAAAAATGTTGAACGATTGTTTTTTACCCG----GTACATTT
AATCCTTCGCTAGAAAATGCATTATTATCGATCTCACCCCCTCCCTCTCGTTAGCTTGTCGACACTGTAGCCGA----AG
CCACCGAGTTGAATCGACCATGGAAAGGACTT-GGAGGTGCCACCCATGTTG-CACCCTTCACCAACCGTGCGTTGCGCA
TTTGCGCTCCTGCTTGGCCATTCCCGTGTAA--------GCATGCACGATGC--CTGCCTCGTCAGCGCCCATGTGCGCC
GCGCGTTAGGACGACACGATCGAGATCGATCGGCTCTACGTACGTTAC--------------------------------
-----GTACCTAGCGTAGCTACTGCATGA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TGGTACGTGCATGTAGAGG
CTTGACCATGCTAGCTACTGC--------CCGGCACGTATACGTGCAGCGTCTGTAACCAGGACACTAGAGGGCGGCTAC
CACTACTGTTCATACGCCGGCTGCTTTCATGGCGAAAGCTACTACTCTTCGCTTTTATGTGGCCGGCCGGATCGATCTTG
TCCCTGCTTCAACTCTGGTTGCATCGATCTCAAAGCAAACCGTCTTGTTTTTTTAGCAGTTTTCGACCATGTTACGCGGG
CAACACGATCAATCTTGACGTACCTACTTTGCAACGGACACAA-AATTCATGGCGTGCACATGTGCATGCAGACTTGTCA
CGGTCACATGAGCTGCGCTGGAGACGACGCACCATATAAGG--GCCGTCGCATCGCACGCTACACACATACACTACAGGA
-AAATCATCAGTGTCTAAAACATTCAAGAGATCGCGAGATAAGCAGGCCGGCCGA---ACGGACATGGAGATGGCGCACA
GAGACCACCTCCTCGCCGCCGTGCACGGCGTCCTCGGCGTCGCCGTCCTCATCCTGTGCCTCGTTGCCGAGCTGTCCGTC
CTCGTCTTCCGGCGGCACGCGG---CGCTGTACCTCCTCCCGGTCTGCGCGATGATGACGCACCTGTGGCGCTCCGGCCG
ACGTGCGGACA---------TCGGCCTGGTGGACTTCGCGTACCTGAAGCCGCCCCGCCGGCTGCGCGTCACCATCCCGG
GCCTGCTCGAGCACCTCCGCCTCATCGGCTGCTTCGACGACGGCAGCGTCGAGTTCATGTCCAGGGTCGTCGAGGACAGC
GGCATGGGCGACGAGACCTACTTTCCGCCGGCGCTGCACTATCTCCCGCCGTCCGCCACGCACGCCGACGCCGTCCAGGA
GGCGGGGATGCTCTTCTTCCCCACGCTCGACGAGCTGTTCGCTAAGACGGGCGTGCCGCCGTCCGCCGTCGGCGCGCTCG
TCGTCAACTGCAGCGGGTTCGGCCCTGCCCCGTCGCTCACCGCCATCATCGCCAACCGCTACCGCATGCCCAGCGACGTC
AAGACCTTCAACCTGTCCGGCATGGGGTGCGCCGCGGGCATTGTCGGCGTGGACGTCGCGAGGGGCGTCCTGAGAGCGCA
CGTGGGCGCCGTCGACTACGCCGTCGTCGTCAGCGCGGAGATCGTCACGATCGGGTGGTACAGAGGGAGGGACCGCAGCA
AGCTTCTGCTCAACTGCTTCTTCCGCACTGGCTGCGCCGCCGCGCTGCTGTCGAACACCGCATCGGCGGCAGCGCCGGTC
AAGTACCGGCTCGTCGCGCTGAAGCGCACGACCATTGCGGCCGACGACTGCGGCTACAATTTGGCCGTGAGGGAGGAGGA
CGACGAGGGCATCACCGGGTTCACCATCGGCCGCGGCCTCGGCCGTGTGTTCCGGGACCTCCTCCGCGCCCACCTCCCCG
GCTTCGGCGCCTCCATCCTCCCGTGGCACGAGAAGCTCCGCTACGCCGCCGCGCTCGTGCGATTCCACCGCCGCCGCCGG
AGTAGCAAGAAGGTCCAAGGCGGCGAAGGCCGCGTGGAG--------------------------GCGCCGAAGCCGAAC
TTCCTGGCGGCGGCGAGCCACTTCTGCCTGCCGTCGTCGGGGATGCCGAACATACGGAGGCTGGCGGAGGGGCTGGGGGT
GGGGGAGAGGGAGGCGGAGGCGGCGCTGGCGACGTTCCAGCGGTTCGGGAACCAGTCGGCGTCGTCGCTGTGGTACCAGC
TCGGGTACCACGAGGCGAGGGGGCGGGTCCGGCGGGGCGACCGCGTGTGGCAGCTCGGCATCGGGAGCGGGCCCAAGGCG
AGCAGCGCCCTGTGGGAGCGCGTCGCGGCGTACGGCGACGCCGCGGCGGCCGACGAGGGGCCGTGGGGCGACTGCGTCCT
CCGCTACCCGGCGAGGGCACCGGGCGCCCCGTTGGCTTGATCTGACCGTACGTACCTAGTGCATGGGTGTAGGGTGATTG
GGCTCCTGGATGGATCAGAGGAGACTGTTTGTTTGCAAGTGCGAGGACAGTGTTGTTTGTGCCGTGCGTACGTACGTACT
TTCAATTTGCTTGCTTGGGTTGCTTAGTTGCTGTTGATCGTCGACGTCGAGTCGTTGTTTCATCGTAGAGCGGAGAATAA
GCTCGGAACCTCCATCTGGGCTTTCTCTATTTTATTGTACTTCGATCTTGTTTCCTGCCTTTCGTCGGAATCCATGGCGT
ATTTTGACTGTTTTCAACTTTGGTCATAAATTGTTTACAATCATTCTTCATGAAGTTTACATTAACAATTTAGGGCATCT
CTAACGCGTACCCTTAAAACGGACACACTATCGGATGTGAATCGCGTTCGGATGCCTTTGCGGACACGATACACGAGCCG
GCCATCCAACCGTGTTTAAACGTCCTCCCTTGTTTTTTTTTTCTCAAGTCCGCCCTTCGGCAGTGTTGTTTGTGCCTTGC
CGTGCGTACGTACGTACTTTCACTTTGCTTGCTTGGCTTGCCTAGTTGCT---------GTTGATCGTCGAGTCGTTGTT
TGGAGCTGCTGCAAGGTGATTGGTAGAGCGGAGACTAAGCTCGATCGCAACCTTCATCTGGGTTTTCTCACTTTTATTGT
---ACTTCGATCTTGTATCCTGCCTTTCGTTTCGGAATCCATGGCGTATTTTGACTGTATTCAACTTTGGTCATAAATTG
TTTGCACAATCATTCTTCATGAAGTTCAAATTACCA-----GGGCATCTTTAACGCCGACTCCTAAAACGAACACACTAT
CCAGCTACAGACCGCGTC------CGGACCCGTTTGCAGACACAATACGCGAGCCGGCCATCTAATCATGTCCCCTAAAT
GCCCGCCCCTGC-TTTTTTCTCTTTCCACAACACTCAAAATAGCTATAGGAAATAACAAAATTCATCCATAAACACACAA
ATATCCCTAGTACAACAATAATTC
>chr5B_1
TGTGATACAGAAATATGAAATTAAAGTTTCACAATCGTATTATCAATGTGAAACTGAAATAGTGAAATG-AAACGTCTTT
CGCCAGCTATGGAGGATCACAAAAAATGCCATTCAGGGTTCGCAAATGCTACCCTAGCTGACGAACGTTCGCCAGCTATG
GGTGTCCACA-----CGTAAAAGGTTGCACGGATATCTAAATAATGTTGAATGATGGTTTTTTACCCG----ATACA-TT
AATCCTTCGCTAGAAAATGCATTATTATCGATCTCACCCCCTCCCTCTCGTTAGCGTGTCGACACTGTAGCCTGCCGGAG
CCACCGAGTTGAATCGCCCATGGAAAGGACTT-GGAGGTGCCACCCATATTG-CACCCTTCACCAACCGTGCGTTGCGCA
TTTGCACCCCTGCTTGGCCATTCCCGTGTAA--------GCACGCACGATCC--CTGCCTCGTCAGCGCCCATGTGCGCC
GCGCGTTAGGACGACACGATCGAGACCGATCGGCTCTACGTACGTACGTACCTCCCCTCCCCTTGCATGCTGCATGTTCT
CTCCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCCCTCTGTTGGTACGTGCATGTAGAGG
CTTGACCATGCTAGCTACTGCCCGCGTGCCCGGCACGTATACGTGCAGCGTCTGTAACCAGGACACTAGAGGGCGGCTAG
CGCTACTGTTCATAGGCCGGCTGCGTTCATGGCGAAAGCTACTACTCTTCGCTTTTATGTGGCCGGCCGGATCGATCTTG
TCC---CTTCAAGTCTGGTTGCATCCATCTCAAAGCAAACCGTCTTGTTTTTTTAGCAGTTTTGGACCATGTTACGCGGG
CAACACGATCAATCTTGACGTACGTACATTGCAATGGTCGACACAATTCATGGCGTGCACATGTGCATGCAGAGTTGTCA
CGGTCACA-----TGAGCTGGAGACGACGCACCATATAAGAGAGCCATAGCATCGTACGCTACGCACATACACTACAGGA
GA----ATCAGCGTCCAAAACACTCAAGAGATCGCGAGATAAGCAGCAGGCG-GA---ACGGACATGGAGATGGCGCACA
GAGACCACCTCCTCGCCGCCGTGCACGGCGTCCTCGGCGTCGCCGTCCTCATCCTGTGCCTCGCTGCCGAGCTGTCCGTC
CTCGTCTTCCGGCGCCACGCGG---CGCTGTACCTCCTCCCCGTCTGCGCGATGATGACGCACCTGTGGCGCTCCGGCCG
ACGTGCGGACA---------TCGGCCTGGTCGACTTCGCGTACCTGAAGCCGCCCCGCCGGCTGCGCGTCACCATCCCGG
GCCTGCTCGAGCACCTCCGCCTTATCGGCTGCTTCGACGACGGCAGCGTCGAGTTCATGTCCAGGGTCGTCGAGGACAGC
GGCATGGGCGACGAGACCTACTTCCCGCCGGCGCTGCACTACCTCCCGCCGTCCGCCACGCACGCCGACGCCGTCCAGGA
GGCGGGGATGCTCTTCTTCCCCACGCTCGACGAGTTGTTCGCTAAGACGGGCGTGCCGCCGTCCGCCGTCGGCGCGCTCG
TCGTCAACTGCAGCGGGTTCGGCCCTGCCCCGTCGCTCACCGCCATCATCGCCAACCGCTACCGCATGCCCAGCGACGTC
AAGACCTTCAACCTGTCCGGCATGGGGTGCGCCGCGGGCATCGTCGGTCTGGACGTCGCGAGGGGCATCCTGAGAGCGCA
CGACGGCGCCGTCGACTACGCCGTCGTCGTCAGCGCGGAGATCGTCACACTCGGGTGGTACCGAGGGAGAGACCGCAGCA
AGCTGCTCCTCAACTGCTTCTTCCGCACCGGCTGCGCCGCCGCGCTGCTGTCGAACACCGCATCGGCGGCAGCGCCGGTC
AAGTACCGGCTCGTCGCGCTGAAGCGCACGACCATCGCGGCCGACGACGGCGGCTACAATCTGGCCGTGAGGGAGGAGGA
CGACGAGGGCATCACGGGGTTCACCATCGGGCGCGGCCTCGGACGTTTGTTCCGGGACCTCCTCCGCGCCCACCTCCCCG
CCTTCGGCGCCTCCATCCTCCCATGGCACGAGAAGCTCCGCTACGCCGCAGCGCTCATGCGATTCCACCGCCACCGCAGG
AGCATCAAAAACCTCCAAGGCGGAGAAGGCCACGTGGAG--------------------------GCGCCGAAGCCGAAC
TTCCTGGCCGCGGCGAGCCACTTCTGCCTACCGTCGTCGGGGATGCCGAACATACGGAGGCTAGCGGAGGGGCTGGGGCT
GGGGGAGAGGGAGGCGGAGGCGGCGCTGGCGACGTTCCAGCGGTTCGGGAACCAGTCGGCGTCGTCGCTGTGGTACCAGC
TCGGGTACCACGAGGCGAGGGGGCGGGTCCGGAGGGGCGACCGCGTGTGGCAGCTCGGCATGGGGAGCGGGCCCAAGGCG
AGCAGCGCCCTGTGGGAGCGCGTCGCCGCACACGGGCGCCCCGCGGCGGCCGACGAGGGGCCGTGGGGCGACTGCGTCCT
CCGCTACCCGGCGAAGGCACTGGGCGCCGCGTTGGCTTGAGCTGAACGTACGCAACCAGTGCATGCG----------TTG
GGTTCCTGGATGGATTGGAGGAGAATGCTTGTTTGCAAGTCCGAGGACGGTGTTGTTTGCACCATGCGCG----CGTACG
TTCACTTTGATTGCTTTGTTTGCTTAGA----------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------GTCGTTGATCGTCGAGTCGTCGTT
TGGAGCTGC---AAGGTGATTTGTAGAGCGGAGAATAAGCTCGG----AATCTTCAACTGGGTTATCTCACTTTTATTGT
---ACTTAGATCTTGTTTCCTGCCTTTCGTTTCGGAATCCATGGCGTATTTTGGCTGTTTTCAACTTTGGTCATAAATTG
TTGCACAATC------------AGTTCAAATTACCA-----CGGCATCTTTAACGTCGACTCTTGAAACGGACACACTAT
CCAGCTACAGACCGCGTCAACGTCCGGACCTGTTTACAGACGCAATAC--------------------------------
--------------------------------------------------------------------------------
------------------------
>chr5A_171
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------CCACATGTAAAAGGTTGCACGGATCTTTAAAAATTGTTGAATGATGGTTTTTTTTACCAGGTATACA-TT
AATCCTTAGCTAGAATGCATTG-----TCGATCTCACCCCCTCCCTCCCGTTAGCGTGTCGACACTGTA----GCCGGAG
CCACCGAGTTGAATCGCCCATGGAAAGGACTTTGGAGGTGCCACCCATTTTGTCACCCTTCACCAACCGTGCATCGCGCA
TTTGCGCTCCTGATTGGCCATTCCCGTGTAACGGTGTAAGCATGCACGATGCCTCTGCCTACTCAGCGCCCATGTGCGCC
GCGCGTTAGGACGACACGATCGAGATCGATCGGCTCTACGTACGT---------CCCTCCCCGTGCATGCCGCACCTTCC
GTTTTGTATCTAGCGTAGCCACTGCATGTTC-------------------------------------------------
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--------------------------------------------------TCTCCCTCTCTTGGTACGTGCATGTAGAGG
CTTGACCATCCTATACCAC-------TGCCCGGCACGTATACGTGCAGCGCCTGTAACCAGGACACTAGAGGGCGGCTAG
CGCTACTGTTCATAGCACGGCTGCTTTCATGGCGAAAGCTACTACTCTTCGCTTTTATGTGGCCGGCCGGATCGATCTTG
TCC---CTTCAACTCCGGTTGCATCGATCTCAAAGCAAACCGTCTTGTTTTTTTAGCAGTTCTCAACCATGTTACGCGGG
CAACACGATCGATCTTGACGTAGTTTGCAACG-------GACACAATTCATGGCGTGCACATGTGCATGCAGACTTGTCA
CGGTCACA-----TGAGCTGGGGACGACGCACCATATAA--GAGCCGTCGCATCGCACGCTACACACATACACTGCAGAA
-A----ATCAGCGTCCAAAACATTCAAGAGATCGCGGGATAAGCAGCAGGTCGAACGGACGGACATGGAGATGGCGCACA
GAGACCACATCCTCGGCGCCGTGCACGGCGTCCTCGGCGCCGCCGTCCTCATCCTGTGCCTCGCTGCCGAGCTGTCCGTC
CTCGTCTTGCGGCGGCACGCGG---CGCTCTATCTCCTCCCCGTCTGCGCGATGTTGACGCACCTGTGGCGCTCCGGCCG
ACGTGCGGGCA---------TTGGGCTGGTGGACTTCGCGTACCTGAAGCCGCCCCGCCGGCTGCGCGTCACCATCCCGG
GCCTGCTCGAGCACCTCCGCCTCATCGGCTGCTTCGACGACGGCAGCGTCGAGTTCATGTCCAGGGTCGTCGAGGACAGC
GGCATGGGCGACGAGACCTACTTCCCGCCGGCGCTGCACTACCTCCCGCCGTCCGCCACGCACGCCGACGCCGTCCAGGA
GGCGGGGATGCTCTTCTTCCCCACGCTCGACGAACTGTTCGCTAAGACGGGCGTGCCGCCGTCCGCCGTCGGCGCGCTCG
TCGTCAACTGCAGCGGGTTCGGCCCTGCCCCGTCGCTTGCCGCCATCATCGCCAACCGCTACCGCATGCCCACCGACGTC
AAGACCTTCAACCTGTCCGGCATGGGATGCGCCGCGGGCATCGTCGGCGTGGACGTCGCGAGGGGCGTCCTGAGGGCGCA
CGCCGGCGCCGTCGACTACGCCGTCGTCGTCAGCGCGGAGATCGTCACGATCGGGTGGTACAGAGGGAGGGACCGCAGCA
AGCTGCTGCTCAACTGCTTCTTCCGCACCGGATGCGCCGCCGCGCTACTGTCGAACACCGCATCGGCGGCAGCGCCGGTC
AAGTACCGGCTCGTCGCGCTGAAGCGCACGACCATCGCGGCCGACGACCGCGGCTACAACTTGGCCATGAGGGAGGAGGA
CGACGAGGGCATCACGGGGTTCACCATCGGGCGCGGCCTCGACCGTGTGTTCCGGGACCTCCTCCGCGCCCACCTCACCG
CCTTCGGCGCCTCCATCCTCCCATGGCACGAGAAGCTCCGCTACGCCGCAGCGCTCGCGCGATTCCGCCGCCGCCGCCGG
AGCAGCAAGAAGGTCCAAGGCGGCGAAGGCCACGTGGAG--------------------------GCGCCGAGGCCGAAC
TTCCTGGCCGCGGCGAGCCACTTCTGCCTGCCGTCGTCGGGGATGCCGAACATACGGAGGCTGGCGGAGGGGCTGGGGCT
GGGGGAGAGGGAGGCGGAGGCGGCGCTGGCGACGTTCCAGCGGTTCGGGAACCAGTCGGCGGCGTCGCTGTGGTACCAGC
TCGGGTACCACGAGGCGAGGGGGCGGGTCCGGCAGGGCGACCGCGTGTGGCAGCTCGGCATCGGGAGCGGGCCCAAGGCG
AGCAGCGCCCTGTGGGAGCGTGTCGCCGCATACGGCGGCGCCGCGGCGGCCGATGAGGGGCCGTGGGGCGACTGCGTCGT
CCGCTACCCGGCGAGGGCACCCGGCGCCCCGTTGGCTTGATCTGGATGTACGTACCTAGTGCATGGGTACAGGGTGTTTG
GGCTCCTGGAAAGGA------------------------TCAGAGGACAGTGTTGTTTGTGCCGTGG-------------
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-----GTACCTACGTACTTTCACTTTGCTTGCT---------TAGTTGCT---------GTTGATCGTCGAGTCGTTGTT
TGGAGCTGC---AAGGTGATTGGTAGAGCGGAGAATAAGCTCGG----AACCTTCATCTGGGTTTTCTCACTTTTATTGT
GGTACTTCGATCTTGTTTCCTGCCCTTCGTTCA-GAATCCATGGCGTATTTTGACTGCTTTCAACTTTGGTCATAA----
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>chr5A_997
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------------------------------------------------------------GGCCATGGACATGGCGCACA
CGGACCACCTCGTGGCGGCCTACCACGGCCTCCTCGCCGCCGCGGGCCTCCTCCTCTGCGTCCTCGCCGA---GGCCCTC
CTCTTCGCGCTGCGGCGGAGCTTCACGCTCTACCTCGTCCCGGTCTCCGCGATGCTG---CTCCTCGGCCGCTACCGCCG
CCGCGCCGCGGGGGGCGCGGTCGGGCTCGTCGACTTCTCCTGCCTCAAGCCGCCTCGCCGGCTGCGGCTCCCCTTGGACG
CCCTGCTGGAGCACCTGGAGCTCGGCGGCTTCTTCGACCGCGGCAGCATCGAGTTCATGACCAAGGCCATCCGCTCCAGC
GGCATGGGCAACGAGACCTACCTCCCGCCCGCGCTGCACTTCCTCCCGCCGGCGTCCACGCACGCCCACGCCATCCGGGA
GGCGCACATGCTCTTCTTCCCCGCCCTCGACGACCTCTTTAGAAAGACCAGCGTGCCGCCGTCCGCCGTCGGCGCTGTCG
TCGTCAACTGCAGCGGCTTCTGCCCGGCGCCCTCGCTCGCCGCCATCATCGCCGACCACTACCGGATGCGCGCCGACGTC
AAGATCTTCAACCTCTCAGGCATGGGCTGCAGCGCCGGCTCCATCGGCGTCGACGTCGCGGCCGGCCTCCTACGGGCGCA
CGCCTTGACG------TACGCCGTGGTGGTCAGCGCCGAGATCCTCACGGTGGGATGGTACTGCGGCAAGGACCACGGGA
AGCTCCTCCTCAACTGCAACTTCCGCACCGGCTGCTCCGCCGCGCTCCTGACCAACAGCA------CGGCCGTGCCGGTG
AAGTACCGGCTCGTCAACGTGACGCGCACGAACACCACGGCCAACGACCGGAGCTACCGCGCGGGGTACCGGGAGGAGGA
CGACGAGGGCATCACCGGCTTCACGCTCGGCCAGGGCGTCGGCCGCATGGTCAGCGAGCTGCTCCGCGCGCACCTCCTCA
CACTCAGCCTCTCCATCCTGCCGTGGCGCGAGAAGGCACGCTTCGCTGCCGCGCTGCTCCTGTCGATGC-----------
------------------GCCAACGAGGGCAGGACAAGCTCGCCGGCAGCAGCTCCGGCGCCTCCGCGCCCATGCCAAAC
TTCCGCGCGGCGTCGGACCACTTCTGCCTGCCTTCCTCGGGGAAGCCGATGATACTGCGGCTGGGGAAGGGGCTGGGGCT
GGGGGAGAGGGAGATGGAGGCGGCGTTGATGACGTTCCACCGGTTCGGGAACCAGTCGGCGGCGTCGCTGTGGTACCAGA
TGGCGTACCTGGAGGCCAAGGCGCGGGTCCGCAAGGGCGACACGGTGTGGCACCTCGGCATCGGGAGCGGGCTCAAGGCC
AACAGCCTCGTGTGGGAGCGTGTCGCAGTCGCCGACGACGTCGCCGCCGGCGGGCTCGACGCGCTGGGCCCGTGG-----
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------------------------
>chr5B_1185
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--------------------TCGGGCTCGTCGACTTCTCCTGCCTCAAGCCTCCGCGCCGGCTGCGGCTCCCCGTGGCCG
GCCTGCTGGAGCACCTGGAGCTCGGCGGCTTCTTCGACCGCGGCAGCATCGAGTTCATGACCAAGGCCATCCGCTCCAGC
GGCATGGGCAACGAGACCTACCTCCCGCCCGCGCTGCACTACCTCCCGCCGGCGTCCACGCACGCGCACGCCATCCGGGA
GGCGCACATGCTCTTCTTCCCTGCCCTCGACGACCTCTTTGGAAAGTCCAGCGTGCCGCCGTCCGCCGTCGGCGCGCTCG
TCGTCAACTGCAGCGGCTTCTGCCCCGCGCCATCGCTCGCCGCCATCATCGCCAACCGCTACCGGATGCGCGCGGACGTC
AAGCTCTTCAACCTGTCAGGCATGGGCTGCAGCGCCGGCTCCATCGGCGTCGACGTCGCGGCCGGCCTCCTGCGGGCGCA
CGCCTTGTCG------TACGCCGTGGTGGTCAGCGCCGAGATCCTCACAATCGGGTGGTACTGCGGCAAGGACCACGGCA
AGCTCCTCCTCAACTGCAACTTCCGCACCGGCTGCTCCGCCGCGCTCCTGACCAACAGCA------CGGCCGTGCCGGTG
AAGTACCGGCTCGTCAACGTGACGCGCACGAACACCACGGCCAACGACCGGAGCTACCGCGCGGGGTACCGGGAGGAGGA
CGAGGAGGGCATCACCGGCTTCACGCTCGGCCAGGGCGTCGGCCGCATGGTCAGCGAGCTGCTCCGCGCGCACCTCCTCA
CGCTCAGCCTCTCCATCCTGCCGTGGCGCGAGAAGGCACGCTTCGCTGCCGCGCTGCTCCTGTCGATGC-----------
------------------GGCGGCGACGGCAAGACAAGCTCGCCGGCAGCAGCTCCGGCGCCTCCGCGCCAATGCCGGAC
TTCCGCGCGGCGGCGGACCACTTCTGCCTGCCTTCCTCGGGCAAGCCGATGATACTGCGGCTGGGGAAGGGGCTCGGGCT
GGGGGAGAGGGAGATGGAGGCGGCGCTGATGACGTTCCACCGGTTCGGGAACCAGTCGGCGGCGTCGCTGTGGTACCAGC
TGGCGTACCTGGAGGCCAAGGGGCGGGTCCGGAAGGGCGACACGGTGTGGCACCTCGGCATCGGGAGCGGGCTCAAGGCC
AACAGCCTCGTGTGGGAGCGCGTCGCCGTCGCCGACG-------------------------------------------
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------------------------
>chr5D_2340
GCATGCA-------------------------------------------------------------------------
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------GCCATGAGGGAGCGCGTCGCCGCATACAGCGGCGCCGCGGCGGCCGACGAGGGGCCGTGGGGCGACTGCGTCCT
CCGCTACCCGGCGAGGGCACCGGGCGCCGCGTTGGCTTGAGCTGAACGTACGTACCCAATTCATGTGTTGGGCTCCTGGA
GG---CTGGATGGATCGGAGGAGAATGCTTGTTTGCAAGTCCGAGGACGGTGTTGTTTGCGCCATGCGC-----------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---GCGCACGTACGTACTTTCACTTTGATTGCT---------TGGTTTGCTTAGTCGTCGTTGATCGTCGAGTCGTCGTT
TGGAGCTGC---AAGGTGATTTGTAGAGCGGAGAATAAGCTCGG----AACCTTCATCTGGGTTTTCTCGCTTTTATTGT
---ACTCCCATCTTGTTTCCTCCCTTTCGTTTCGGAATCCATGGCGTATTTTGACAGTTTTCAACTTTGGTCATAAATTG
TTTGCACATTCATTCTTTATCAAGTTCAAATTACCAAATTAGGGCATCTCTAACACCGACTCTTAAAACGGACATGCTAT
CCGACTACAAACCGCGTC------CGGACCCGTTTGCAGACATAATACACGAGTCGACCATCCAATCATGTCCCCTAAAC
GTCCTCCCCTATTTTTTTTCTCTTTCCGCAACATTCAAAATAG-------------------------------------
------------------------
>SNPs
-------------------------S---SS-----S-----------S------------------SSS----SS----
---S------SSS--SSS--------------S-------S--------S-----------S------------------
-------------------S---------S---------------------S---S----------------S----S--
-------------------------------------------------------S----------------SS------
----------------S-------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SSS--------------------------------
--------S----------S--------S---------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------S
-S------------S-----------------------------------------------------------------
---SSS--------------------------------------------------------------------------
-----------------------S---S------S--S-SSS--------------------------------------
--------SSSSS--S------------------------S---------------------------------------
--SSSS-----S---S------------------------------SSS-S-S---------------------------
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-----------------------S-----------------S--------------------------------------
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-----------------------------------------S--------------------------------------
--SS----------------------------------------------------------------------------
----S-----------------------S---------------------------------------------------
-----------------------------------S------------S-------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--S--------------------------------------------------
---------------------------------------------S----------------------SS------S---
----------------S-------S--S------------S---------------------------SSSSSS-----S
----S----S------S-S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS------------------------------SSSSSSSSS--------------------------------------
---------SSS----------------------S--------SSSSS--------------------------------
----------------S-----------------------------------------S---------------------
--------S--------S--S-----------------------------------------S-------S---------
------------------------------------------------S----S--S-----S----------------S
-S--S-----SS---------------S-----S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_1046
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------------------------------------------------------------------CCGGATCGATCTTG
TCCCTG--------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------
>reverse_2403
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TAGCAAGAAGGTCCAAGGCG----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_2109
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------TCAACTGCTTCTTCCGCACT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>reverse_3257
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TTTGCGGACACGATACACGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
