Multiple sequence alignment - TraesCS5D01G240000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G240000 chr5D 100.000 3604 0 0 1 3604 348264459 348260856 0.000000e+00 6656
1 TraesCS5D01G240000 chr5D 93.182 396 23 4 3210 3604 304893114 304893506 2.410000e-161 579
2 TraesCS5D01G240000 chr5D 75.974 616 121 21 1 599 514147046 514147651 3.520000e-75 292
3 TraesCS5D01G240000 chr5D 88.372 129 13 1 27 155 37605290 37605416 1.730000e-33 154
4 TraesCS5D01G240000 chr5A 93.765 3015 159 18 1 3003 448542430 448539433 0.000000e+00 4499
5 TraesCS5D01G240000 chr5A 81.623 604 84 16 1 599 312278747 312279328 3.260000e-130 475
6 TraesCS5D01G240000 chr5A 87.050 139 16 2 3010 3147 448527113 448526976 4.820000e-34 156
7 TraesCS5D01G240000 chr5B 94.566 2650 124 14 502 3145 408370165 408367530 0.000000e+00 4078
8 TraesCS5D01G240000 chr5B 76.263 198 44 3 66 261 576089284 576089088 6.370000e-18 102
9 TraesCS5D01G240000 chr4D 94.388 392 20 2 3214 3604 382782937 382782547 5.150000e-168 601
10 TraesCS5D01G240000 chr7D 94.588 388 19 2 3218 3604 131516733 131516347 1.850000e-167 599
11 TraesCS5D01G240000 chr7D 82.248 614 94 9 1 601 5990005 5989394 1.920000e-142 516
12 TraesCS5D01G240000 chr7D 82.149 605 81 13 1 601 20043539 20042958 8.990000e-136 494
13 TraesCS5D01G240000 chr2D 94.574 387 19 2 3219 3604 137815589 137815974 6.660000e-167 597
14 TraesCS5D01G240000 chr2D 94.072 388 22 1 3218 3604 519182033 519181646 4.010000e-164 588
15 TraesCS5D01G240000 chr2D 94.057 387 21 2 3219 3604 128414523 128414908 1.440000e-163 586
16 TraesCS5D01G240000 chr2D 93.814 388 22 2 3218 3604 128444025 128444411 1.860000e-162 582
17 TraesCS5D01G240000 chr2D 81.848 606 84 18 1 600 632463540 632462955 1.500000e-133 486
18 TraesCS5D01G240000 chr2D 82.530 332 53 5 269 599 471967581 471967254 1.640000e-73 287
19 TraesCS5D01G240000 chr3D 94.315 387 21 1 3218 3604 260025977 260025592 3.100000e-165 592
20 TraesCS5D01G240000 chr3D 82.587 603 68 14 1 601 267285124 267284557 6.950000e-137 497
21 TraesCS5D01G240000 chr3B 93.782 386 22 2 3220 3604 384353464 384353848 2.410000e-161 579
22 TraesCS5D01G240000 chr3B 82.285 604 70 16 1 601 345009601 345009032 4.180000e-134 488
23 TraesCS5D01G240000 chr7A 83.197 613 89 7 1 601 20167135 20166525 1.890000e-152 549
24 TraesCS5D01G240000 chr3A 81.738 564 67 14 40 601 277490337 277490866 4.270000e-119 438
25 TraesCS5D01G240000 chr1B 74.722 360 75 9 1 356 329208940 329208593 2.900000e-31 147
26 TraesCS5D01G240000 chr7B 82.278 158 21 6 134 287 45177626 45177472 2.920000e-26 130


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G240000 chr5D 348260856 348264459 3603 True 6656 6656 100.000 1 3604 1 chr5D.!!$R1 3603
1 TraesCS5D01G240000 chr5D 514147046 514147651 605 False 292 292 75.974 1 599 1 chr5D.!!$F3 598
2 TraesCS5D01G240000 chr5A 448539433 448542430 2997 True 4499 4499 93.765 1 3003 1 chr5A.!!$R2 3002
3 TraesCS5D01G240000 chr5A 312278747 312279328 581 False 475 475 81.623 1 599 1 chr5A.!!$F1 598
4 TraesCS5D01G240000 chr5B 408367530 408370165 2635 True 4078 4078 94.566 502 3145 1 chr5B.!!$R1 2643
5 TraesCS5D01G240000 chr7D 5989394 5990005 611 True 516 516 82.248 1 601 1 chr7D.!!$R1 600
6 TraesCS5D01G240000 chr7D 20042958 20043539 581 True 494 494 82.149 1 601 1 chr7D.!!$R2 600
7 TraesCS5D01G240000 chr2D 632462955 632463540 585 True 486 486 81.848 1 600 1 chr2D.!!$R3 599
8 TraesCS5D01G240000 chr3D 267284557 267285124 567 True 497 497 82.587 1 601 1 chr3D.!!$R2 600
9 TraesCS5D01G240000 chr3B 345009032 345009601 569 True 488 488 82.285 1 601 1 chr3B.!!$R1 600
10 TraesCS5D01G240000 chr7A 20166525 20167135 610 True 549 549 83.197 1 601 1 chr7A.!!$R1 600
11 TraesCS5D01G240000 chr3A 277490337 277490866 529 False 438 438 81.738 40 601 1 chr3A.!!$F1 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 667 0.035739 TTGCCCTAACTGAACCGGTC 59.964 55.0 8.04 1.72 0.0 4.79 F
1066 1131 1.976132 GCTGCTGTGCCTCCTATGGA 61.976 60.0 0.00 0.00 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1664 1729 0.806492 GAAGTCGGAGATGTTCGGCC 60.806 60.0 0.00 0.00 40.67 6.13 R
2871 2940 0.392863 TCGGTCAATGGCCACATCTG 60.393 55.0 8.16 3.24 35.94 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
221 227 2.747686 GTGGCCACCGAAGAGGAA 59.252 61.111 26.31 0.00 45.00 3.36
222 228 1.376037 GTGGCCACCGAAGAGGAAG 60.376 63.158 26.31 0.00 45.00 3.46
226 232 1.157585 GCCACCGAAGAGGAAGAAAC 58.842 55.000 0.00 0.00 45.00 2.78
311 317 4.309950 ACAGTGGACGAACGGGCC 62.310 66.667 0.00 0.00 0.00 5.80
330 337 3.334054 GGGTCTGGCAGAAGGGCT 61.334 66.667 20.62 0.00 43.83 5.19
418 472 2.423898 CGGGGTAGAGGCGACACAT 61.424 63.158 0.00 0.00 0.00 3.21
419 473 1.442148 GGGGTAGAGGCGACACATC 59.558 63.158 0.00 0.00 0.00 3.06
533 588 2.340078 GGATCGGCTAGATGCGCA 59.660 61.111 14.96 14.96 44.05 6.09
539 594 1.546029 TCGGCTAGATGCGCATTAGAT 59.454 47.619 28.37 18.08 44.05 1.98
550 605 2.033424 GCGCATTAGATGAGGAAAACCC 59.967 50.000 0.30 0.00 0.00 4.11
611 667 0.035739 TTGCCCTAACTGAACCGGTC 59.964 55.000 8.04 1.72 0.00 4.79
633 690 7.011016 CGGTCTAAAATAATCATGTGTGTGCTA 59.989 37.037 0.00 0.00 0.00 3.49
834 892 8.273780 ACTTGCAACCATTGAAAATGTTTAAA 57.726 26.923 0.00 0.00 0.00 1.52
989 1054 6.674694 AATACATCTTCAGATCTTGTGTGC 57.325 37.500 7.16 0.00 31.21 4.57
992 1057 3.708403 TCTTCAGATCTTGTGTGCCAT 57.292 42.857 0.00 0.00 0.00 4.40
1066 1131 1.976132 GCTGCTGTGCCTCCTATGGA 61.976 60.000 0.00 0.00 0.00 3.41
1263 1328 2.556792 CTCGTCGTGCTGTCGTCT 59.443 61.111 0.00 0.00 0.00 4.18
1631 1696 2.671070 CGGGCAGGAGTTCATGGT 59.329 61.111 0.00 0.00 0.00 3.55
1896 1961 4.441634 GCTCTCCTAACGGTACATCACATT 60.442 45.833 0.00 0.00 0.00 2.71
1900 1965 5.795972 TCCTAACGGTACATCACATTTTCA 58.204 37.500 0.00 0.00 0.00 2.69
1902 1967 5.064707 CCTAACGGTACATCACATTTTCAGG 59.935 44.000 0.00 0.00 0.00 3.86
1934 1999 6.750501 CCATGACTGATGAAATTAAAGCTGTG 59.249 38.462 0.00 0.00 33.31 3.66
1940 2005 5.240623 TGATGAAATTAAAGCTGTGACCGTT 59.759 36.000 0.00 0.00 0.00 4.44
2000 2065 4.736896 GGGAGCCACACGACGACC 62.737 72.222 0.00 0.00 0.00 4.79
2276 2341 4.715523 AACGTGTGGGCCATCGGG 62.716 66.667 27.90 14.56 37.18 5.14
2546 2611 1.815840 GCTAGAGCTTGCCGTTCCC 60.816 63.158 0.00 0.00 38.21 3.97
2582 2647 3.811118 TTGGACGAAAGGCGCGGAA 62.811 57.895 8.83 0.00 46.04 4.30
2593 2658 0.097150 GGCGCGGAAGATTTGAGTTC 59.903 55.000 8.83 0.00 0.00 3.01
2611 2676 3.369385 GTTCTTCTTCGTGACGAACTCA 58.631 45.455 17.28 0.62 45.10 3.41
2627 2692 3.881937 ACTCATTACCCGTTGACTACC 57.118 47.619 0.00 0.00 0.00 3.18
2757 2823 7.233962 TCGTGGGAGGAGCTATGTTTATTTATA 59.766 37.037 0.00 0.00 0.00 0.98
2796 2865 3.976704 CAGGGCCAAACTGGTATGA 57.023 52.632 6.18 0.00 40.46 2.15
2818 2887 2.762459 TCTAGCGGCCGAACCCAT 60.762 61.111 33.48 9.03 33.26 4.00
2894 2963 2.109126 GTGGCCATTGACCGAGCTC 61.109 63.158 9.72 2.73 0.00 4.09
2984 3053 4.759183 GGCCATAACATCTCTCCATCTTTC 59.241 45.833 0.00 0.00 0.00 2.62
3048 3117 1.233949 CCCATGGAGGATTTGGGGG 59.766 63.158 15.22 0.00 45.37 5.40
3053 3122 2.316586 GGAGGATTTGGGGGAGCCA 61.317 63.158 0.00 0.00 0.00 4.75
3055 3124 0.684479 GAGGATTTGGGGGAGCCAAC 60.684 60.000 0.00 0.00 0.00 3.77
3103 3172 2.722071 GAGACTTCGTAGGATTCGCAG 58.278 52.381 0.00 0.00 0.00 5.18
3140 3209 2.607187 GAGGCGTATGATAACATCCCG 58.393 52.381 0.00 0.00 37.87 5.14
3145 3214 2.288825 CGTATGATAACATCCCGCTGGT 60.289 50.000 0.00 0.00 37.87 4.00
3146 3215 2.550830 ATGATAACATCCCGCTGGTC 57.449 50.000 0.00 0.00 29.98 4.02
3147 3216 0.104120 TGATAACATCCCGCTGGTCG 59.896 55.000 0.00 0.00 38.08 4.79
3148 3217 0.104304 GATAACATCCCGCTGGTCGT 59.896 55.000 0.00 0.00 36.19 4.34
3149 3218 1.338973 GATAACATCCCGCTGGTCGTA 59.661 52.381 0.00 0.00 36.19 3.43
3150 3219 0.457035 TAACATCCCGCTGGTCGTAC 59.543 55.000 0.00 0.00 36.19 3.67
3151 3220 1.537814 AACATCCCGCTGGTCGTACA 61.538 55.000 0.00 0.00 36.19 2.90
3152 3221 1.327690 ACATCCCGCTGGTCGTACAT 61.328 55.000 0.00 0.00 36.19 2.29
3153 3222 0.875908 CATCCCGCTGGTCGTACATG 60.876 60.000 0.00 0.00 36.19 3.21
3154 3223 1.040893 ATCCCGCTGGTCGTACATGA 61.041 55.000 0.00 0.00 36.19 3.07
3155 3224 1.216977 CCCGCTGGTCGTACATGAA 59.783 57.895 0.00 0.00 36.19 2.57
3156 3225 0.806102 CCCGCTGGTCGTACATGAAG 60.806 60.000 0.00 0.00 36.19 3.02
3157 3226 0.172578 CCGCTGGTCGTACATGAAGA 59.827 55.000 0.00 0.00 36.19 2.87
3158 3227 1.403647 CCGCTGGTCGTACATGAAGAA 60.404 52.381 0.00 0.00 36.19 2.52
3159 3228 1.920574 CGCTGGTCGTACATGAAGAAG 59.079 52.381 0.00 0.00 0.00 2.85
3160 3229 2.671351 CGCTGGTCGTACATGAAGAAGT 60.671 50.000 0.00 0.00 0.00 3.01
3161 3230 3.326747 GCTGGTCGTACATGAAGAAGTT 58.673 45.455 0.00 0.00 0.00 2.66
3162 3231 3.123621 GCTGGTCGTACATGAAGAAGTTG 59.876 47.826 0.00 0.00 0.00 3.16
3163 3232 3.659786 TGGTCGTACATGAAGAAGTTGG 58.340 45.455 0.00 0.00 0.00 3.77
3164 3233 3.322541 TGGTCGTACATGAAGAAGTTGGA 59.677 43.478 0.00 0.00 0.00 3.53
3165 3234 3.927142 GGTCGTACATGAAGAAGTTGGAG 59.073 47.826 0.00 0.00 0.00 3.86
3166 3235 4.557205 GTCGTACATGAAGAAGTTGGAGT 58.443 43.478 0.00 0.00 0.00 3.85
3167 3236 4.386049 GTCGTACATGAAGAAGTTGGAGTG 59.614 45.833 0.00 0.00 0.00 3.51
3168 3237 4.279922 TCGTACATGAAGAAGTTGGAGTGA 59.720 41.667 0.00 0.00 0.00 3.41
3169 3238 5.047306 TCGTACATGAAGAAGTTGGAGTGAT 60.047 40.000 0.00 0.00 0.00 3.06
3170 3239 5.289675 CGTACATGAAGAAGTTGGAGTGATC 59.710 44.000 0.00 0.00 0.00 2.92
3171 3240 5.495926 ACATGAAGAAGTTGGAGTGATCT 57.504 39.130 0.00 0.00 0.00 2.75
3172 3241 5.243981 ACATGAAGAAGTTGGAGTGATCTG 58.756 41.667 0.00 0.00 0.00 2.90
3173 3242 3.668447 TGAAGAAGTTGGAGTGATCTGC 58.332 45.455 0.00 0.00 0.00 4.26
3174 3243 3.326006 TGAAGAAGTTGGAGTGATCTGCT 59.674 43.478 0.00 0.00 33.13 4.24
3175 3244 3.331478 AGAAGTTGGAGTGATCTGCTG 57.669 47.619 0.00 0.00 33.13 4.41
3176 3245 2.027377 AGAAGTTGGAGTGATCTGCTGG 60.027 50.000 0.00 0.00 33.13 4.85
3177 3246 1.649321 AGTTGGAGTGATCTGCTGGA 58.351 50.000 0.00 0.00 33.13 3.86
3178 3247 1.277557 AGTTGGAGTGATCTGCTGGAC 59.722 52.381 0.00 0.00 33.13 4.02
3179 3248 0.615331 TTGGAGTGATCTGCTGGACC 59.385 55.000 0.00 0.00 33.13 4.46
3180 3249 0.545071 TGGAGTGATCTGCTGGACCA 60.545 55.000 0.00 0.00 33.13 4.02
3181 3250 0.107945 GGAGTGATCTGCTGGACCAC 60.108 60.000 0.00 0.00 0.00 4.16
3182 3251 0.459237 GAGTGATCTGCTGGACCACG 60.459 60.000 0.00 0.00 33.37 4.94
3183 3252 1.188219 AGTGATCTGCTGGACCACGT 61.188 55.000 0.00 0.00 33.37 4.49
3184 3253 0.320771 GTGATCTGCTGGACCACGTT 60.321 55.000 0.00 0.00 0.00 3.99
3185 3254 0.320683 TGATCTGCTGGACCACGTTG 60.321 55.000 0.00 0.00 0.00 4.10
3186 3255 0.037326 GATCTGCTGGACCACGTTGA 60.037 55.000 0.00 0.00 0.00 3.18
3187 3256 0.396435 ATCTGCTGGACCACGTTGAA 59.604 50.000 0.00 0.00 0.00 2.69
3188 3257 0.249868 TCTGCTGGACCACGTTGAAG 60.250 55.000 0.00 0.00 0.00 3.02
3189 3258 1.227823 TGCTGGACCACGTTGAAGG 60.228 57.895 0.00 0.00 0.00 3.46
3190 3259 1.070786 GCTGGACCACGTTGAAGGA 59.929 57.895 0.00 0.00 0.00 3.36
3191 3260 0.951040 GCTGGACCACGTTGAAGGAG 60.951 60.000 0.00 0.00 0.00 3.69
3192 3261 0.679505 CTGGACCACGTTGAAGGAGA 59.320 55.000 0.00 0.00 0.00 3.71
3193 3262 1.276421 CTGGACCACGTTGAAGGAGAT 59.724 52.381 0.00 0.00 0.00 2.75
3194 3263 1.001974 TGGACCACGTTGAAGGAGATG 59.998 52.381 0.00 0.00 0.00 2.90
3195 3264 1.275291 GGACCACGTTGAAGGAGATGA 59.725 52.381 0.00 0.00 0.00 2.92
3196 3265 2.611518 GACCACGTTGAAGGAGATGAG 58.388 52.381 0.00 0.00 0.00 2.90
3197 3266 1.276421 ACCACGTTGAAGGAGATGAGG 59.724 52.381 0.00 0.00 0.00 3.86
3198 3267 1.550524 CCACGTTGAAGGAGATGAGGA 59.449 52.381 0.00 0.00 0.00 3.71
3199 3268 2.417924 CCACGTTGAAGGAGATGAGGAG 60.418 54.545 0.00 0.00 0.00 3.69
3200 3269 1.827969 ACGTTGAAGGAGATGAGGAGG 59.172 52.381 0.00 0.00 0.00 4.30
3201 3270 1.827969 CGTTGAAGGAGATGAGGAGGT 59.172 52.381 0.00 0.00 0.00 3.85
3202 3271 2.234908 CGTTGAAGGAGATGAGGAGGTT 59.765 50.000 0.00 0.00 0.00 3.50
3203 3272 3.604582 GTTGAAGGAGATGAGGAGGTTG 58.395 50.000 0.00 0.00 0.00 3.77
3204 3273 1.556911 TGAAGGAGATGAGGAGGTTGC 59.443 52.381 0.00 0.00 0.00 4.17
3205 3274 1.556911 GAAGGAGATGAGGAGGTTGCA 59.443 52.381 0.00 0.00 0.00 4.08
3206 3275 0.908198 AGGAGATGAGGAGGTTGCAC 59.092 55.000 0.00 0.00 0.00 4.57
3207 3276 0.460987 GGAGATGAGGAGGTTGCACG 60.461 60.000 0.00 0.00 0.00 5.34
3208 3277 0.247736 GAGATGAGGAGGTTGCACGT 59.752 55.000 0.00 0.00 0.00 4.49
3209 3278 0.036952 AGATGAGGAGGTTGCACGTG 60.037 55.000 12.28 12.28 0.00 4.49
3210 3279 0.037326 GATGAGGAGGTTGCACGTGA 60.037 55.000 22.23 1.04 0.00 4.35
3211 3280 0.396435 ATGAGGAGGTTGCACGTGAA 59.604 50.000 22.23 5.66 0.00 3.18
3212 3281 0.249868 TGAGGAGGTTGCACGTGAAG 60.250 55.000 22.23 0.00 0.00 3.02
3213 3282 1.569479 GAGGAGGTTGCACGTGAAGC 61.569 60.000 22.23 18.77 0.00 3.86
3214 3283 2.617274 GGAGGTTGCACGTGAAGCC 61.617 63.158 21.29 21.29 0.00 4.35
3215 3284 2.594592 AGGTTGCACGTGAAGCCC 60.595 61.111 24.64 15.13 0.00 5.19
3216 3285 3.670377 GGTTGCACGTGAAGCCCC 61.670 66.667 22.23 6.47 0.00 5.80
3217 3286 3.670377 GTTGCACGTGAAGCCCCC 61.670 66.667 22.23 0.00 0.00 5.40
3218 3287 3.884774 TTGCACGTGAAGCCCCCT 61.885 61.111 22.23 0.00 0.00 4.79
3219 3288 4.641645 TGCACGTGAAGCCCCCTG 62.642 66.667 22.23 0.00 0.00 4.45
3220 3289 4.329545 GCACGTGAAGCCCCCTGA 62.330 66.667 22.23 0.00 0.00 3.86
3221 3290 2.046892 CACGTGAAGCCCCCTGAG 60.047 66.667 10.90 0.00 0.00 3.35
3222 3291 3.322466 ACGTGAAGCCCCCTGAGG 61.322 66.667 0.00 0.00 0.00 3.86
3234 3303 3.331252 CCTGAGGGAGTCCTGGATT 57.669 57.895 9.58 0.00 45.05 3.01
3235 3304 2.478872 CCTGAGGGAGTCCTGGATTA 57.521 55.000 9.58 0.00 45.05 1.75
3236 3305 2.324541 CCTGAGGGAGTCCTGGATTAG 58.675 57.143 9.58 0.00 45.05 1.73
3237 3306 2.324541 CTGAGGGAGTCCTGGATTAGG 58.675 57.143 9.58 0.00 45.05 2.69
3265 3334 4.760047 GGCGTCCGGCTGTGTGAT 62.760 66.667 5.95 0.00 42.94 3.06
3266 3335 2.183300 GCGTCCGGCTGTGTGATA 59.817 61.111 0.00 0.00 39.11 2.15
3267 3336 1.227263 GCGTCCGGCTGTGTGATAT 60.227 57.895 0.00 0.00 39.11 1.63
3268 3337 1.490693 GCGTCCGGCTGTGTGATATG 61.491 60.000 0.00 0.00 39.11 1.78
3269 3338 0.875908 CGTCCGGCTGTGTGATATGG 60.876 60.000 0.00 0.00 0.00 2.74
3270 3339 0.532862 GTCCGGCTGTGTGATATGGG 60.533 60.000 0.00 0.00 0.00 4.00
3271 3340 1.893808 CCGGCTGTGTGATATGGGC 60.894 63.158 0.00 0.00 0.00 5.36
3272 3341 1.893808 CGGCTGTGTGATATGGGCC 60.894 63.158 0.00 0.00 36.60 5.80
3273 3342 1.893808 GGCTGTGTGATATGGGCCG 60.894 63.158 0.00 0.00 0.00 6.13
3274 3343 1.893808 GCTGTGTGATATGGGCCGG 60.894 63.158 0.00 0.00 0.00 6.13
3275 3344 1.829456 CTGTGTGATATGGGCCGGA 59.171 57.895 5.05 0.00 0.00 5.14
3276 3345 0.532862 CTGTGTGATATGGGCCGGAC 60.533 60.000 5.05 0.00 0.00 4.79
3277 3346 0.980754 TGTGTGATATGGGCCGGACT 60.981 55.000 7.57 0.00 0.00 3.85
3278 3347 0.532862 GTGTGATATGGGCCGGACTG 60.533 60.000 7.57 0.00 0.00 3.51
3279 3348 0.689412 TGTGATATGGGCCGGACTGA 60.689 55.000 7.57 0.00 0.00 3.41
3280 3349 0.687354 GTGATATGGGCCGGACTGAT 59.313 55.000 7.57 1.70 0.00 2.90
3281 3350 0.686789 TGATATGGGCCGGACTGATG 59.313 55.000 7.57 0.00 0.00 3.07
3282 3351 0.036010 GATATGGGCCGGACTGATGG 60.036 60.000 7.57 0.00 0.00 3.51
3283 3352 0.473694 ATATGGGCCGGACTGATGGA 60.474 55.000 7.57 0.00 0.00 3.41
3284 3353 1.407656 TATGGGCCGGACTGATGGAC 61.408 60.000 7.57 0.00 0.00 4.02
3286 3355 4.530857 GGCCGGACTGATGGACCG 62.531 72.222 5.05 0.00 45.24 4.79
3287 3356 3.771160 GCCGGACTGATGGACCGT 61.771 66.667 5.05 0.00 44.34 4.83
3288 3357 2.184322 CCGGACTGATGGACCGTG 59.816 66.667 0.00 0.00 44.34 4.94
3289 3358 2.348104 CCGGACTGATGGACCGTGA 61.348 63.158 0.00 0.00 44.34 4.35
3290 3359 1.589630 CGGACTGATGGACCGTGAA 59.410 57.895 0.00 0.00 41.47 3.18
3291 3360 0.458543 CGGACTGATGGACCGTGAAG 60.459 60.000 0.00 0.00 41.47 3.02
3292 3361 0.895530 GGACTGATGGACCGTGAAGA 59.104 55.000 0.00 0.00 0.00 2.87
3293 3362 1.482593 GGACTGATGGACCGTGAAGAT 59.517 52.381 0.00 0.00 0.00 2.40
3294 3363 2.693591 GGACTGATGGACCGTGAAGATA 59.306 50.000 0.00 0.00 0.00 1.98
3295 3364 3.491104 GGACTGATGGACCGTGAAGATAC 60.491 52.174 0.00 0.00 0.00 2.24
3296 3365 3.096852 ACTGATGGACCGTGAAGATACA 58.903 45.455 0.00 0.00 0.00 2.29
3297 3366 3.513912 ACTGATGGACCGTGAAGATACAA 59.486 43.478 0.00 0.00 0.00 2.41
3298 3367 4.115516 CTGATGGACCGTGAAGATACAAG 58.884 47.826 0.00 0.00 0.00 3.16
3299 3368 3.118775 TGATGGACCGTGAAGATACAAGG 60.119 47.826 0.00 0.00 43.14 3.61
3305 3374 5.326200 ACCGTGAAGATACAAGGTAGAAG 57.674 43.478 0.00 0.00 46.98 2.85
3306 3375 4.159879 ACCGTGAAGATACAAGGTAGAAGG 59.840 45.833 0.00 0.00 46.98 3.46
3307 3376 4.113354 CGTGAAGATACAAGGTAGAAGGC 58.887 47.826 0.00 0.00 0.00 4.35
3308 3377 4.443621 GTGAAGATACAAGGTAGAAGGCC 58.556 47.826 0.00 0.00 0.00 5.19
3309 3378 4.162509 GTGAAGATACAAGGTAGAAGGCCT 59.837 45.833 0.00 0.00 38.11 5.19
3310 3379 4.783227 TGAAGATACAAGGTAGAAGGCCTT 59.217 41.667 20.65 20.65 46.39 4.35
3311 3380 5.104900 TGAAGATACAAGGTAGAAGGCCTTC 60.105 44.000 34.25 34.25 43.87 3.46
3312 3381 3.712218 AGATACAAGGTAGAAGGCCTTCC 59.288 47.826 36.59 24.96 43.87 3.46
3313 3382 0.992695 ACAAGGTAGAAGGCCTTCCC 59.007 55.000 36.59 30.67 43.87 3.97
3314 3383 0.256177 CAAGGTAGAAGGCCTTCCCC 59.744 60.000 36.59 33.58 43.87 4.81
3315 3384 0.919780 AAGGTAGAAGGCCTTCCCCC 60.920 60.000 36.59 33.27 42.19 5.40
3316 3385 1.618447 GGTAGAAGGCCTTCCCCCA 60.618 63.158 36.59 19.70 40.33 4.96
3317 3386 0.994050 GGTAGAAGGCCTTCCCCCAT 60.994 60.000 36.59 22.79 40.33 4.00
3318 3387 0.183731 GTAGAAGGCCTTCCCCCATG 59.816 60.000 36.59 0.00 40.33 3.66
3319 3388 0.253630 TAGAAGGCCTTCCCCCATGT 60.254 55.000 36.59 21.43 40.33 3.21
3320 3389 1.076705 GAAGGCCTTCCCCCATGTC 60.077 63.158 31.91 6.90 33.64 3.06
3321 3390 2.573893 GAAGGCCTTCCCCCATGTCC 62.574 65.000 31.91 5.98 33.64 4.02
3322 3391 4.506255 GGCCTTCCCCCATGTCCG 62.506 72.222 0.00 0.00 0.00 4.79
3323 3392 4.506255 GCCTTCCCCCATGTCCGG 62.506 72.222 0.00 0.00 0.00 5.14
3324 3393 2.690881 CCTTCCCCCATGTCCGGA 60.691 66.667 0.00 0.00 0.00 5.14
3325 3394 2.078665 CCTTCCCCCATGTCCGGAT 61.079 63.158 7.81 0.00 0.00 4.18
3326 3395 1.149174 CTTCCCCCATGTCCGGATG 59.851 63.158 7.81 1.85 0.00 3.51
3327 3396 2.343475 CTTCCCCCATGTCCGGATGG 62.343 65.000 16.07 16.07 42.45 3.51
3340 3409 1.369321 GGATGGGACTCTCCGATGC 59.631 63.158 0.00 0.00 34.98 3.91
3341 3410 1.006805 GATGGGACTCTCCGATGCG 60.007 63.158 0.00 0.00 34.98 4.73
3342 3411 1.739338 GATGGGACTCTCCGATGCGT 61.739 60.000 0.00 0.00 34.98 5.24
3343 3412 2.021068 ATGGGACTCTCCGATGCGTG 62.021 60.000 0.00 0.00 37.43 5.34
3344 3413 2.105128 GGACTCTCCGATGCGTGG 59.895 66.667 0.00 0.00 0.00 4.94
3345 3414 2.415608 GGACTCTCCGATGCGTGGA 61.416 63.158 0.00 0.00 0.00 4.02
3346 3415 1.736586 GACTCTCCGATGCGTGGAT 59.263 57.895 0.00 0.00 34.32 3.41
3347 3416 0.596083 GACTCTCCGATGCGTGGATG 60.596 60.000 0.00 0.00 34.32 3.51
3348 3417 1.300465 CTCTCCGATGCGTGGATGG 60.300 63.158 0.00 0.00 34.32 3.51
3349 3418 2.969238 CTCCGATGCGTGGATGGC 60.969 66.667 0.00 0.00 34.32 4.40
3350 3419 3.738429 CTCCGATGCGTGGATGGCA 62.738 63.158 0.00 0.00 45.71 4.92
3351 3420 2.823593 CCGATGCGTGGATGGCAA 60.824 61.111 0.00 0.00 44.66 4.52
3352 3421 2.405805 CCGATGCGTGGATGGCAAA 61.406 57.895 0.00 0.00 44.66 3.68
3353 3422 1.505807 CGATGCGTGGATGGCAAAA 59.494 52.632 0.00 0.00 44.66 2.44
3354 3423 0.101040 CGATGCGTGGATGGCAAAAT 59.899 50.000 0.00 0.00 44.66 1.82
3355 3424 1.469595 CGATGCGTGGATGGCAAAATT 60.470 47.619 0.00 0.00 44.66 1.82
3356 3425 1.928503 GATGCGTGGATGGCAAAATTG 59.071 47.619 0.00 0.00 44.66 2.32
3357 3426 0.037512 TGCGTGGATGGCAAAATTGG 60.038 50.000 0.00 0.00 37.49 3.16
3376 3445 4.603231 TGGCGTCCAAATACGTAATTTC 57.397 40.909 0.00 0.00 44.64 2.17
3377 3446 3.374678 TGGCGTCCAAATACGTAATTTCC 59.625 43.478 0.00 0.02 44.64 3.13
3378 3447 3.624410 GGCGTCCAAATACGTAATTTCCT 59.376 43.478 0.00 0.00 44.64 3.36
3379 3448 4.095334 GGCGTCCAAATACGTAATTTCCTT 59.905 41.667 0.00 0.00 44.64 3.36
3380 3449 5.392272 GGCGTCCAAATACGTAATTTCCTTT 60.392 40.000 0.00 0.00 44.64 3.11
3381 3450 6.088173 GCGTCCAAATACGTAATTTCCTTTT 58.912 36.000 0.00 0.00 44.64 2.27
3382 3451 6.583427 GCGTCCAAATACGTAATTTCCTTTTT 59.417 34.615 0.00 0.00 44.64 1.94
3383 3452 7.201291 GCGTCCAAATACGTAATTTCCTTTTTC 60.201 37.037 0.00 0.00 44.64 2.29
3384 3453 8.019094 CGTCCAAATACGTAATTTCCTTTTTCT 58.981 33.333 0.00 0.00 35.54 2.52
3385 3454 9.124807 GTCCAAATACGTAATTTCCTTTTTCTG 57.875 33.333 0.00 0.00 35.54 3.02
3386 3455 7.810759 TCCAAATACGTAATTTCCTTTTTCTGC 59.189 33.333 0.00 0.00 35.54 4.26
3387 3456 7.596995 CCAAATACGTAATTTCCTTTTTCTGCA 59.403 33.333 0.00 0.00 35.54 4.41
3388 3457 8.973378 CAAATACGTAATTTCCTTTTTCTGCAA 58.027 29.630 0.00 0.00 35.54 4.08
3389 3458 8.742554 AATACGTAATTTCCTTTTTCTGCAAG 57.257 30.769 0.00 0.00 0.00 4.01
3390 3459 4.982295 ACGTAATTTCCTTTTTCTGCAAGC 59.018 37.500 0.00 0.00 0.00 4.01
3391 3460 4.385748 CGTAATTTCCTTTTTCTGCAAGCC 59.614 41.667 0.00 0.00 0.00 4.35
3392 3461 2.507339 TTTCCTTTTTCTGCAAGCCG 57.493 45.000 0.00 0.00 0.00 5.52
3393 3462 1.686355 TTCCTTTTTCTGCAAGCCGA 58.314 45.000 0.00 0.00 0.00 5.54
3394 3463 0.951558 TCCTTTTTCTGCAAGCCGAC 59.048 50.000 0.00 0.00 0.00 4.79
3395 3464 0.954452 CCTTTTTCTGCAAGCCGACT 59.046 50.000 0.00 0.00 0.00 4.18
3396 3465 1.068954 CCTTTTTCTGCAAGCCGACTC 60.069 52.381 0.00 0.00 0.00 3.36
3397 3466 1.876156 CTTTTTCTGCAAGCCGACTCT 59.124 47.619 0.00 0.00 0.00 3.24
3398 3467 1.229428 TTTTCTGCAAGCCGACTCTG 58.771 50.000 0.00 0.00 0.00 3.35
3399 3468 0.106708 TTTCTGCAAGCCGACTCTGT 59.893 50.000 0.00 0.00 0.00 3.41
3400 3469 0.966179 TTCTGCAAGCCGACTCTGTA 59.034 50.000 0.00 0.00 0.00 2.74
3401 3470 0.243907 TCTGCAAGCCGACTCTGTAC 59.756 55.000 0.00 0.00 0.00 2.90
3402 3471 0.038251 CTGCAAGCCGACTCTGTACA 60.038 55.000 0.00 0.00 0.00 2.90
3403 3472 0.391228 TGCAAGCCGACTCTGTACAA 59.609 50.000 0.00 0.00 0.00 2.41
3404 3473 0.790814 GCAAGCCGACTCTGTACAAC 59.209 55.000 0.00 0.00 0.00 3.32
3405 3474 1.429463 CAAGCCGACTCTGTACAACC 58.571 55.000 0.00 0.00 0.00 3.77
3406 3475 0.320697 AAGCCGACTCTGTACAACCC 59.679 55.000 0.00 0.00 0.00 4.11
3407 3476 0.542232 AGCCGACTCTGTACAACCCT 60.542 55.000 0.00 0.00 0.00 4.34
3408 3477 1.180029 GCCGACTCTGTACAACCCTA 58.820 55.000 0.00 0.00 0.00 3.53
3409 3478 1.134560 GCCGACTCTGTACAACCCTAG 59.865 57.143 0.00 0.00 0.00 3.02
3410 3479 1.749634 CCGACTCTGTACAACCCTAGG 59.250 57.143 0.06 0.06 0.00 3.02
3411 3480 1.134560 CGACTCTGTACAACCCTAGGC 59.865 57.143 2.05 0.00 0.00 3.93
3412 3481 1.481363 GACTCTGTACAACCCTAGGCC 59.519 57.143 2.05 0.00 0.00 5.19
3413 3482 0.831307 CTCTGTACAACCCTAGGCCC 59.169 60.000 2.05 0.00 0.00 5.80
3414 3483 0.619543 TCTGTACAACCCTAGGCCCC 60.620 60.000 2.05 0.00 0.00 5.80
3415 3484 0.620700 CTGTACAACCCTAGGCCCCT 60.621 60.000 2.05 0.00 0.00 4.79
3416 3485 0.619543 TGTACAACCCTAGGCCCCTC 60.620 60.000 2.05 0.00 0.00 4.30
3417 3486 1.003835 TACAACCCTAGGCCCCTCC 59.996 63.158 2.05 0.00 0.00 4.30
3418 3487 2.884179 TACAACCCTAGGCCCCTCCG 62.884 65.000 2.05 0.00 40.77 4.63
3419 3488 4.817909 AACCCTAGGCCCCTCCGG 62.818 72.222 2.05 0.00 40.77 5.14
3422 3491 4.798682 CCTAGGCCCCTCCGGTGT 62.799 72.222 0.00 0.00 40.77 4.16
3423 3492 3.155167 CTAGGCCCCTCCGGTGTC 61.155 72.222 0.00 0.00 40.77 3.67
3424 3493 3.680196 TAGGCCCCTCCGGTGTCT 61.680 66.667 0.00 0.00 40.77 3.41
3425 3494 2.294170 CTAGGCCCCTCCGGTGTCTA 62.294 65.000 0.00 0.00 40.77 2.59
3426 3495 1.661990 TAGGCCCCTCCGGTGTCTAT 61.662 60.000 0.00 0.00 40.77 1.98
3427 3496 1.152398 GGCCCCTCCGGTGTCTATA 60.152 63.158 0.00 0.00 0.00 1.31
3428 3497 0.544595 GGCCCCTCCGGTGTCTATAT 60.545 60.000 0.00 0.00 0.00 0.86
3429 3498 1.272872 GGCCCCTCCGGTGTCTATATA 60.273 57.143 0.00 0.00 0.00 0.86
3430 3499 2.532843 GCCCCTCCGGTGTCTATATAA 58.467 52.381 0.00 0.00 0.00 0.98
3431 3500 2.901839 GCCCCTCCGGTGTCTATATAAA 59.098 50.000 0.00 0.00 0.00 1.40
3432 3501 3.306571 GCCCCTCCGGTGTCTATATAAAC 60.307 52.174 0.00 0.00 0.00 2.01
3433 3502 3.260128 CCCCTCCGGTGTCTATATAAACC 59.740 52.174 0.00 0.68 0.00 3.27
3454 3523 2.030371 GGAGGGTTTAGTCCGTAGAGG 58.970 57.143 0.00 0.00 42.97 3.69
3455 3524 1.408340 GAGGGTTTAGTCCGTAGAGGC 59.592 57.143 0.00 0.00 40.77 4.70
3456 3525 1.006878 AGGGTTTAGTCCGTAGAGGCT 59.993 52.381 0.00 0.00 40.77 4.58
3457 3526 2.243221 AGGGTTTAGTCCGTAGAGGCTA 59.757 50.000 0.00 0.00 40.77 3.93
3458 3527 3.117208 AGGGTTTAGTCCGTAGAGGCTAT 60.117 47.826 0.00 0.00 40.77 2.97
3459 3528 3.255395 GGGTTTAGTCCGTAGAGGCTATC 59.745 52.174 0.00 0.00 40.77 2.08
3460 3529 3.887716 GGTTTAGTCCGTAGAGGCTATCA 59.112 47.826 0.00 0.00 40.77 2.15
3461 3530 4.023021 GGTTTAGTCCGTAGAGGCTATCAG 60.023 50.000 0.00 0.00 40.77 2.90
3462 3531 4.701651 TTAGTCCGTAGAGGCTATCAGA 57.298 45.455 0.00 0.00 40.77 3.27
3463 3532 3.579534 AGTCCGTAGAGGCTATCAGAA 57.420 47.619 0.00 0.00 40.77 3.02
3464 3533 4.107127 AGTCCGTAGAGGCTATCAGAAT 57.893 45.455 0.00 0.00 40.77 2.40
3465 3534 4.475345 AGTCCGTAGAGGCTATCAGAATT 58.525 43.478 0.00 0.00 40.77 2.17
3466 3535 4.521256 AGTCCGTAGAGGCTATCAGAATTC 59.479 45.833 0.00 0.00 40.77 2.17
3467 3536 4.278669 GTCCGTAGAGGCTATCAGAATTCA 59.721 45.833 8.44 0.00 40.77 2.57
3468 3537 5.047660 GTCCGTAGAGGCTATCAGAATTCAT 60.048 44.000 8.44 0.00 40.77 2.57
3469 3538 6.151312 GTCCGTAGAGGCTATCAGAATTCATA 59.849 42.308 8.44 0.00 40.77 2.15
3470 3539 6.892456 TCCGTAGAGGCTATCAGAATTCATAT 59.108 38.462 8.44 3.13 40.77 1.78
3471 3540 8.053355 TCCGTAGAGGCTATCAGAATTCATATA 58.947 37.037 8.44 4.15 40.77 0.86
3472 3541 8.349245 CCGTAGAGGCTATCAGAATTCATATAG 58.651 40.741 16.87 16.87 0.00 1.31
3473 3542 8.349245 CGTAGAGGCTATCAGAATTCATATAGG 58.651 40.741 20.19 9.05 0.00 2.57
3474 3543 7.123355 AGAGGCTATCAGAATTCATATAGGC 57.877 40.000 28.13 28.13 43.89 3.93
3478 3547 8.243961 GGCTATCAGAATTCATATAGGCTAGA 57.756 38.462 28.10 0.00 41.67 2.43
3479 3548 8.141268 GGCTATCAGAATTCATATAGGCTAGAC 58.859 40.741 28.10 13.69 41.67 2.59
3480 3549 8.690884 GCTATCAGAATTCATATAGGCTAGACA 58.309 37.037 20.19 0.00 0.00 3.41
3483 3552 8.891985 TCAGAATTCATATAGGCTAGACATCT 57.108 34.615 8.44 0.00 0.00 2.90
3484 3553 9.981460 TCAGAATTCATATAGGCTAGACATCTA 57.019 33.333 8.44 0.00 0.00 1.98
3486 3555 9.420118 AGAATTCATATAGGCTAGACATCTAGG 57.580 37.037 15.98 0.27 44.63 3.02
3487 3556 8.546083 AATTCATATAGGCTAGACATCTAGGG 57.454 38.462 15.98 0.00 44.63 3.53
3488 3557 6.660147 TCATATAGGCTAGACATCTAGGGT 57.340 41.667 15.98 0.00 44.63 4.34
3489 3558 7.045693 TCATATAGGCTAGACATCTAGGGTT 57.954 40.000 15.98 0.00 44.63 4.11
3490 3559 7.479579 TCATATAGGCTAGACATCTAGGGTTT 58.520 38.462 15.98 0.00 44.63 3.27
3491 3560 8.621073 TCATATAGGCTAGACATCTAGGGTTTA 58.379 37.037 15.98 0.00 44.63 2.01
3492 3561 8.908903 CATATAGGCTAGACATCTAGGGTTTAG 58.091 40.741 15.98 7.98 44.63 1.85
3493 3562 3.898741 AGGCTAGACATCTAGGGTTTAGC 59.101 47.826 20.18 20.18 44.63 3.09
3494 3563 4.260139 GCTAGACATCTAGGGTTTAGCC 57.740 50.000 18.78 8.17 44.63 3.93
3495 3564 3.641906 GCTAGACATCTAGGGTTTAGCCA 59.358 47.826 18.78 0.00 44.63 4.75
3496 3565 4.284746 GCTAGACATCTAGGGTTTAGCCAT 59.715 45.833 18.78 0.00 44.63 4.40
3497 3566 5.221742 GCTAGACATCTAGGGTTTAGCCATT 60.222 44.000 18.78 0.00 44.63 3.16
3498 3567 6.014499 GCTAGACATCTAGGGTTTAGCCATTA 60.014 42.308 18.78 0.00 44.63 1.90
3499 3568 6.176014 AGACATCTAGGGTTTAGCCATTAC 57.824 41.667 0.26 0.00 39.65 1.89
3500 3569 4.957296 ACATCTAGGGTTTAGCCATTACG 58.043 43.478 0.26 0.00 39.65 3.18
3501 3570 4.652421 ACATCTAGGGTTTAGCCATTACGA 59.348 41.667 0.26 0.00 39.65 3.43
3502 3571 5.307196 ACATCTAGGGTTTAGCCATTACGAT 59.693 40.000 0.26 0.00 39.65 3.73
3503 3572 5.464030 TCTAGGGTTTAGCCATTACGATC 57.536 43.478 0.26 0.00 39.65 3.69
3504 3573 5.145564 TCTAGGGTTTAGCCATTACGATCT 58.854 41.667 0.26 0.00 39.65 2.75
3505 3574 4.338379 AGGGTTTAGCCATTACGATCTC 57.662 45.455 0.26 0.00 39.65 2.75
3506 3575 3.057734 GGGTTTAGCCATTACGATCTCG 58.942 50.000 0.00 0.00 41.74 4.04
3507 3576 3.243636 GGGTTTAGCCATTACGATCTCGA 60.244 47.826 6.60 0.00 40.13 4.04
3508 3577 3.982058 GGTTTAGCCATTACGATCTCGAG 59.018 47.826 5.93 5.93 38.95 4.04
3509 3578 3.917329 TTAGCCATTACGATCTCGAGG 57.083 47.619 13.56 0.00 43.02 4.63
3510 3579 1.693627 AGCCATTACGATCTCGAGGT 58.306 50.000 13.56 4.76 43.02 3.85
3511 3580 2.860009 AGCCATTACGATCTCGAGGTA 58.140 47.619 13.56 4.20 43.02 3.08
3512 3581 2.814919 AGCCATTACGATCTCGAGGTAG 59.185 50.000 13.56 8.65 43.02 3.18
3513 3582 2.812591 GCCATTACGATCTCGAGGTAGA 59.187 50.000 13.13 0.00 43.02 2.59
3514 3583 3.440872 GCCATTACGATCTCGAGGTAGAT 59.559 47.826 13.13 0.00 43.02 1.98
3515 3584 4.437659 GCCATTACGATCTCGAGGTAGATC 60.438 50.000 13.13 7.50 45.64 2.75
3523 3592 5.766150 ATCTCGAGGTAGATCAACTCTTG 57.234 43.478 13.56 0.00 35.28 3.02
3524 3593 4.590918 TCTCGAGGTAGATCAACTCTTGT 58.409 43.478 13.56 0.00 35.28 3.16
3525 3594 5.742063 TCTCGAGGTAGATCAACTCTTGTA 58.258 41.667 13.56 0.00 35.28 2.41
3526 3595 6.178324 TCTCGAGGTAGATCAACTCTTGTAA 58.822 40.000 13.56 0.00 35.28 2.41
3527 3596 6.093771 TCTCGAGGTAGATCAACTCTTGTAAC 59.906 42.308 13.56 0.00 35.28 2.50
3528 3597 5.125097 TCGAGGTAGATCAACTCTTGTAACC 59.875 44.000 0.00 0.00 35.28 2.85
3529 3598 5.662456 GAGGTAGATCAACTCTTGTAACCC 58.338 45.833 0.00 0.00 35.28 4.11
3530 3599 4.470304 AGGTAGATCAACTCTTGTAACCCC 59.530 45.833 0.00 0.00 35.28 4.95
3531 3600 4.470304 GGTAGATCAACTCTTGTAACCCCT 59.530 45.833 0.00 0.00 35.28 4.79
3532 3601 5.659971 GGTAGATCAACTCTTGTAACCCCTA 59.340 44.000 0.00 0.00 35.28 3.53
3533 3602 6.326843 GGTAGATCAACTCTTGTAACCCCTAT 59.673 42.308 0.00 0.00 35.28 2.57
3534 3603 7.508296 GGTAGATCAACTCTTGTAACCCCTATA 59.492 40.741 0.00 0.00 35.28 1.31
3535 3604 7.362802 AGATCAACTCTTGTAACCCCTATAC 57.637 40.000 0.00 0.00 0.00 1.47
3536 3605 7.133483 AGATCAACTCTTGTAACCCCTATACT 58.867 38.462 0.00 0.00 0.00 2.12
3537 3606 6.786967 TCAACTCTTGTAACCCCTATACTC 57.213 41.667 0.00 0.00 0.00 2.59
3538 3607 6.258354 TCAACTCTTGTAACCCCTATACTCA 58.742 40.000 0.00 0.00 0.00 3.41
3539 3608 6.901300 TCAACTCTTGTAACCCCTATACTCAT 59.099 38.462 0.00 0.00 0.00 2.90
3540 3609 6.980416 ACTCTTGTAACCCCTATACTCATC 57.020 41.667 0.00 0.00 0.00 2.92
3541 3610 6.441222 ACTCTTGTAACCCCTATACTCATCA 58.559 40.000 0.00 0.00 0.00 3.07
3542 3611 6.901300 ACTCTTGTAACCCCTATACTCATCAA 59.099 38.462 0.00 0.00 0.00 2.57
3543 3612 7.402071 ACTCTTGTAACCCCTATACTCATCAAA 59.598 37.037 0.00 0.00 0.00 2.69
3544 3613 7.792032 TCTTGTAACCCCTATACTCATCAAAG 58.208 38.462 0.00 0.00 0.00 2.77
3545 3614 7.402071 TCTTGTAACCCCTATACTCATCAAAGT 59.598 37.037 0.00 0.00 0.00 2.66
3546 3615 7.120923 TGTAACCCCTATACTCATCAAAGTC 57.879 40.000 0.00 0.00 0.00 3.01
3547 3616 6.670464 TGTAACCCCTATACTCATCAAAGTCA 59.330 38.462 0.00 0.00 0.00 3.41
3548 3617 6.636454 AACCCCTATACTCATCAAAGTCAA 57.364 37.500 0.00 0.00 0.00 3.18
3549 3618 6.831664 ACCCCTATACTCATCAAAGTCAAT 57.168 37.500 0.00 0.00 0.00 2.57
3550 3619 6.831976 ACCCCTATACTCATCAAAGTCAATC 58.168 40.000 0.00 0.00 0.00 2.67
3551 3620 6.386927 ACCCCTATACTCATCAAAGTCAATCA 59.613 38.462 0.00 0.00 0.00 2.57
3552 3621 7.092444 ACCCCTATACTCATCAAAGTCAATCAA 60.092 37.037 0.00 0.00 0.00 2.57
3553 3622 7.443575 CCCCTATACTCATCAAAGTCAATCAAG 59.556 40.741 0.00 0.00 0.00 3.02
3554 3623 7.041508 CCCTATACTCATCAAAGTCAATCAAGC 60.042 40.741 0.00 0.00 0.00 4.01
3555 3624 7.496920 CCTATACTCATCAAAGTCAATCAAGCA 59.503 37.037 0.00 0.00 0.00 3.91
3556 3625 5.624344 ACTCATCAAAGTCAATCAAGCAG 57.376 39.130 0.00 0.00 0.00 4.24
3557 3626 4.458295 ACTCATCAAAGTCAATCAAGCAGG 59.542 41.667 0.00 0.00 0.00 4.85
3558 3627 4.654915 TCATCAAAGTCAATCAAGCAGGA 58.345 39.130 0.00 0.00 0.00 3.86
3559 3628 5.072055 TCATCAAAGTCAATCAAGCAGGAA 58.928 37.500 0.00 0.00 0.00 3.36
3560 3629 5.182570 TCATCAAAGTCAATCAAGCAGGAAG 59.817 40.000 0.00 0.00 0.00 3.46
3561 3630 4.464008 TCAAAGTCAATCAAGCAGGAAGT 58.536 39.130 0.00 0.00 0.00 3.01
3562 3631 5.620206 TCAAAGTCAATCAAGCAGGAAGTA 58.380 37.500 0.00 0.00 0.00 2.24
3563 3632 5.702670 TCAAAGTCAATCAAGCAGGAAGTAG 59.297 40.000 0.00 0.00 0.00 2.57
3564 3633 5.489792 AAGTCAATCAAGCAGGAAGTAGA 57.510 39.130 0.00 0.00 0.00 2.59
3565 3634 5.083533 AGTCAATCAAGCAGGAAGTAGAG 57.916 43.478 0.00 0.00 0.00 2.43
3566 3635 4.530161 AGTCAATCAAGCAGGAAGTAGAGT 59.470 41.667 0.00 0.00 0.00 3.24
3567 3636 5.012561 AGTCAATCAAGCAGGAAGTAGAGTT 59.987 40.000 0.00 0.00 0.00 3.01
3568 3637 5.703130 GTCAATCAAGCAGGAAGTAGAGTTT 59.297 40.000 0.00 0.00 0.00 2.66
3569 3638 6.205658 GTCAATCAAGCAGGAAGTAGAGTTTT 59.794 38.462 0.00 0.00 0.00 2.43
3570 3639 7.387948 GTCAATCAAGCAGGAAGTAGAGTTTTA 59.612 37.037 0.00 0.00 0.00 1.52
3571 3640 7.387948 TCAATCAAGCAGGAAGTAGAGTTTTAC 59.612 37.037 0.00 0.00 0.00 2.01
3572 3641 5.548406 TCAAGCAGGAAGTAGAGTTTTACC 58.452 41.667 0.00 0.00 0.00 2.85
3573 3642 5.307196 TCAAGCAGGAAGTAGAGTTTTACCT 59.693 40.000 0.00 0.00 0.00 3.08
3574 3643 5.408880 AGCAGGAAGTAGAGTTTTACCTC 57.591 43.478 0.00 0.00 0.00 3.85
3575 3644 4.223255 AGCAGGAAGTAGAGTTTTACCTCC 59.777 45.833 0.00 0.00 35.33 4.30
3576 3645 4.020485 GCAGGAAGTAGAGTTTTACCTCCA 60.020 45.833 4.23 0.00 36.85 3.86
3577 3646 5.338463 GCAGGAAGTAGAGTTTTACCTCCAT 60.338 44.000 4.23 0.00 36.85 3.41
3578 3647 6.712276 CAGGAAGTAGAGTTTTACCTCCATT 58.288 40.000 4.23 0.00 36.85 3.16
3579 3648 7.580882 GCAGGAAGTAGAGTTTTACCTCCATTA 60.581 40.741 4.23 0.00 36.85 1.90
3580 3649 8.319146 CAGGAAGTAGAGTTTTACCTCCATTAA 58.681 37.037 4.23 0.00 36.85 1.40
3581 3650 8.541234 AGGAAGTAGAGTTTTACCTCCATTAAG 58.459 37.037 4.23 0.00 36.85 1.85
3582 3651 8.537858 GGAAGTAGAGTTTTACCTCCATTAAGA 58.462 37.037 0.00 0.00 35.25 2.10
3583 3652 9.589111 GAAGTAGAGTTTTACCTCCATTAAGAG 57.411 37.037 0.00 0.00 31.53 2.85
3591 3660 2.826674 CTCCATTAAGAGGGCCCAAA 57.173 50.000 27.56 13.04 0.00 3.28
3592 3661 2.379005 CTCCATTAAGAGGGCCCAAAC 58.621 52.381 27.56 15.15 0.00 2.93
3593 3662 1.006639 TCCATTAAGAGGGCCCAAACC 59.993 52.381 27.56 10.11 0.00 3.27
3594 3663 1.007118 CCATTAAGAGGGCCCAAACCT 59.993 52.381 27.56 12.49 42.18 3.50
3595 3664 2.102578 CATTAAGAGGGCCCAAACCTG 58.897 52.381 27.56 10.25 38.79 4.00
3596 3665 0.407918 TTAAGAGGGCCCAAACCTGG 59.592 55.000 27.56 0.00 43.10 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
219 225 5.063438 TCGTCGGATTGATTCATGTTTCTTC 59.937 40.000 0.00 0.00 0.00 2.87
221 227 4.503910 TCGTCGGATTGATTCATGTTTCT 58.496 39.130 0.00 0.00 0.00 2.52
222 228 4.857871 TCGTCGGATTGATTCATGTTTC 57.142 40.909 0.00 0.00 0.00 2.78
226 232 4.045024 CGATTCGTCGGATTGATTCATG 57.955 45.455 0.00 0.00 0.00 3.07
311 317 4.101448 CCCTTCTGCCAGACCCCG 62.101 72.222 0.00 0.00 0.00 5.73
314 321 2.045536 CAGCCCTTCTGCCAGACC 60.046 66.667 0.00 0.00 35.78 3.85
341 348 4.832608 CTACCGCGTTGCCTCCCC 62.833 72.222 4.92 0.00 0.00 4.81
379 400 2.587194 CTGCCTCTTCGCCGATGG 60.587 66.667 0.00 0.00 0.00 3.51
405 459 2.805546 GCCGATGTGTCGCCTCTA 59.194 61.111 0.00 0.00 46.32 2.43
418 472 3.411351 GCAAAACTCTCGCGCCGA 61.411 61.111 0.00 1.17 0.00 5.54
419 473 3.354499 GAGCAAAACTCTCGCGCCG 62.354 63.158 0.00 0.00 42.62 6.46
533 588 9.147732 GGATAAATTGGGTTTTCCTCATCTAAT 57.852 33.333 0.00 0.00 40.46 1.73
539 594 5.016245 AGGAGGATAAATTGGGTTTTCCTCA 59.984 40.000 19.45 0.00 44.80 3.86
607 663 5.965334 GCACACACATGATTATTTTAGACCG 59.035 40.000 0.00 0.00 0.00 4.79
633 690 8.255111 TCATGTATCCACATCTGTCTCTATTT 57.745 34.615 0.00 0.00 43.73 1.40
717 774 3.093717 TGAGAAGTCGTGGAAGACAAC 57.906 47.619 0.00 0.00 43.24 3.32
834 892 7.724061 ACAAGGTTCAAACATCCAAGTACTAAT 59.276 33.333 0.00 0.00 0.00 1.73
910 975 6.511282 CGAGCTATCTCAGTTACGTATGTTCA 60.511 42.308 0.00 0.00 39.30 3.18
911 976 5.846994 CGAGCTATCTCAGTTACGTATGTTC 59.153 44.000 0.00 0.00 39.30 3.18
989 1054 1.341285 TGGGCTCCATGACTGAAATGG 60.341 52.381 0.00 6.93 45.13 3.16
992 1057 0.770499 TGTGGGCTCCATGACTGAAA 59.230 50.000 0.00 0.00 35.28 2.69
1066 1131 0.822121 GGGGGCTTCGTTGACTTGTT 60.822 55.000 0.00 0.00 0.00 2.83
1389 1454 2.031012 CGCAGGTGCTTCCACAGA 59.969 61.111 0.00 0.00 43.88 3.41
1662 1727 1.218316 GTCGGAGATGTTCGGCCTT 59.782 57.895 0.00 0.00 40.67 4.35
1664 1729 0.806492 GAAGTCGGAGATGTTCGGCC 60.806 60.000 0.00 0.00 40.67 6.13
1896 1961 2.093500 CAGTCATGGATCGTCCCTGAAA 60.093 50.000 11.47 0.00 41.69 2.69
1900 1965 1.690893 CATCAGTCATGGATCGTCCCT 59.309 52.381 0.00 0.00 35.03 4.20
1902 1967 3.459232 TTCATCAGTCATGGATCGTCC 57.541 47.619 0.00 0.00 36.96 4.79
1934 1999 6.128391 TGACAGCAAGATTAATTACAACGGTC 60.128 38.462 0.00 0.00 0.00 4.79
1940 2005 7.392953 TGGTTCATGACAGCAAGATTAATTACA 59.607 33.333 0.00 0.00 0.00 2.41
2276 2341 3.391382 CACACCTCGGGGTCCCTC 61.391 72.222 2.28 0.00 45.41 4.30
2582 2647 4.681942 CGTCACGAAGAAGAACTCAAATCT 59.318 41.667 0.00 0.00 0.00 2.40
2593 2658 4.323868 GGTAATGAGTTCGTCACGAAGAAG 59.676 45.833 14.26 0.00 46.54 2.85
2611 2676 5.494390 AGAAAAGGTAGTCAACGGGTAAT 57.506 39.130 0.00 0.00 0.00 1.89
2703 2769 9.772973 AGAAAATTACAATACAGTACTCACACA 57.227 29.630 0.00 0.00 0.00 3.72
2818 2887 2.607750 GTGGAGGGGTGGAGAGCA 60.608 66.667 0.00 0.00 0.00 4.26
2866 2935 2.048023 AATGGCCACATCTGCGGTG 61.048 57.895 8.16 0.00 35.94 4.94
2867 2936 2.048023 CAATGGCCACATCTGCGGT 61.048 57.895 8.16 0.00 35.94 5.68
2868 2937 1.750018 TCAATGGCCACATCTGCGG 60.750 57.895 8.16 0.00 35.94 5.69
2869 2938 1.430632 GTCAATGGCCACATCTGCG 59.569 57.895 8.16 0.00 35.94 5.18
2870 2939 1.811860 GGTCAATGGCCACATCTGC 59.188 57.895 8.16 0.00 35.94 4.26
2871 2940 0.392863 TCGGTCAATGGCCACATCTG 60.393 55.000 8.16 3.24 35.94 2.90
2876 2945 2.045926 AGCTCGGTCAATGGCCAC 60.046 61.111 8.16 0.00 0.00 5.01
2882 2951 3.760035 ACGGCGAGCTCGGTCAAT 61.760 61.111 35.10 10.25 40.23 2.57
3062 3131 2.813200 GCTAGCGGTAGGTGGACC 59.187 66.667 22.24 1.57 36.00 4.46
3092 3161 3.866066 GCCTAATGATGCTGCGAATCCTA 60.866 47.826 0.00 0.00 0.00 2.94
3100 3169 1.227943 TCCCGCCTAATGATGCTGC 60.228 57.895 0.00 0.00 0.00 5.25
3103 3172 0.321122 CTCCTCCCGCCTAATGATGC 60.321 60.000 0.00 0.00 0.00 3.91
3140 3209 2.960819 ACTTCTTCATGTACGACCAGC 58.039 47.619 0.00 0.00 0.00 4.85
3145 3214 4.279922 TCACTCCAACTTCTTCATGTACGA 59.720 41.667 0.00 0.00 0.00 3.43
3146 3215 4.556233 TCACTCCAACTTCTTCATGTACG 58.444 43.478 0.00 0.00 0.00 3.67
3147 3216 6.312426 CAGATCACTCCAACTTCTTCATGTAC 59.688 42.308 0.00 0.00 0.00 2.90
3148 3217 6.401394 CAGATCACTCCAACTTCTTCATGTA 58.599 40.000 0.00 0.00 0.00 2.29
3149 3218 5.243981 CAGATCACTCCAACTTCTTCATGT 58.756 41.667 0.00 0.00 0.00 3.21
3150 3219 4.094590 GCAGATCACTCCAACTTCTTCATG 59.905 45.833 0.00 0.00 0.00 3.07
3151 3220 4.019501 AGCAGATCACTCCAACTTCTTCAT 60.020 41.667 0.00 0.00 0.00 2.57
3152 3221 3.326006 AGCAGATCACTCCAACTTCTTCA 59.674 43.478 0.00 0.00 0.00 3.02
3153 3222 3.683822 CAGCAGATCACTCCAACTTCTTC 59.316 47.826 0.00 0.00 0.00 2.87
3154 3223 3.558746 CCAGCAGATCACTCCAACTTCTT 60.559 47.826 0.00 0.00 0.00 2.52
3155 3224 2.027377 CCAGCAGATCACTCCAACTTCT 60.027 50.000 0.00 0.00 0.00 2.85
3156 3225 2.027745 TCCAGCAGATCACTCCAACTTC 60.028 50.000 0.00 0.00 0.00 3.01
3157 3226 1.980765 TCCAGCAGATCACTCCAACTT 59.019 47.619 0.00 0.00 0.00 2.66
3158 3227 1.277557 GTCCAGCAGATCACTCCAACT 59.722 52.381 0.00 0.00 0.00 3.16
3159 3228 1.677217 GGTCCAGCAGATCACTCCAAC 60.677 57.143 0.00 0.00 0.00 3.77
3160 3229 0.615331 GGTCCAGCAGATCACTCCAA 59.385 55.000 0.00 0.00 0.00 3.53
3161 3230 0.545071 TGGTCCAGCAGATCACTCCA 60.545 55.000 0.00 0.00 27.56 3.86
3162 3231 2.290847 TGGTCCAGCAGATCACTCC 58.709 57.895 0.00 0.00 27.56 3.85
3166 3235 0.320683 CAACGTGGTCCAGCAGATCA 60.321 55.000 0.00 0.00 31.28 2.92
3167 3236 0.037326 TCAACGTGGTCCAGCAGATC 60.037 55.000 0.00 0.00 0.00 2.75
3168 3237 0.396435 TTCAACGTGGTCCAGCAGAT 59.604 50.000 0.00 0.00 0.00 2.90
3169 3238 0.249868 CTTCAACGTGGTCCAGCAGA 60.250 55.000 0.00 0.00 0.00 4.26
3170 3239 1.230635 CCTTCAACGTGGTCCAGCAG 61.231 60.000 0.00 0.00 0.00 4.24
3171 3240 1.227823 CCTTCAACGTGGTCCAGCA 60.228 57.895 0.00 0.00 0.00 4.41
3172 3241 0.951040 CTCCTTCAACGTGGTCCAGC 60.951 60.000 0.00 0.00 0.00 4.85
3173 3242 0.679505 TCTCCTTCAACGTGGTCCAG 59.320 55.000 0.00 0.00 0.00 3.86
3174 3243 1.001974 CATCTCCTTCAACGTGGTCCA 59.998 52.381 0.00 0.00 0.00 4.02
3175 3244 1.275291 TCATCTCCTTCAACGTGGTCC 59.725 52.381 0.00 0.00 0.00 4.46
3176 3245 2.611518 CTCATCTCCTTCAACGTGGTC 58.388 52.381 0.00 0.00 0.00 4.02
3177 3246 1.276421 CCTCATCTCCTTCAACGTGGT 59.724 52.381 0.00 0.00 0.00 4.16
3178 3247 1.550524 TCCTCATCTCCTTCAACGTGG 59.449 52.381 0.00 0.00 0.00 4.94
3179 3248 2.417924 CCTCCTCATCTCCTTCAACGTG 60.418 54.545 0.00 0.00 0.00 4.49
3180 3249 1.827969 CCTCCTCATCTCCTTCAACGT 59.172 52.381 0.00 0.00 0.00 3.99
3181 3250 1.827969 ACCTCCTCATCTCCTTCAACG 59.172 52.381 0.00 0.00 0.00 4.10
3182 3251 3.604582 CAACCTCCTCATCTCCTTCAAC 58.395 50.000 0.00 0.00 0.00 3.18
3183 3252 2.026822 GCAACCTCCTCATCTCCTTCAA 60.027 50.000 0.00 0.00 0.00 2.69
3184 3253 1.556911 GCAACCTCCTCATCTCCTTCA 59.443 52.381 0.00 0.00 0.00 3.02
3185 3254 1.556911 TGCAACCTCCTCATCTCCTTC 59.443 52.381 0.00 0.00 0.00 3.46
3186 3255 1.280421 GTGCAACCTCCTCATCTCCTT 59.720 52.381 0.00 0.00 0.00 3.36
3187 3256 0.908198 GTGCAACCTCCTCATCTCCT 59.092 55.000 0.00 0.00 0.00 3.69
3188 3257 0.460987 CGTGCAACCTCCTCATCTCC 60.461 60.000 0.00 0.00 0.00 3.71
3189 3258 0.247736 ACGTGCAACCTCCTCATCTC 59.752 55.000 0.00 0.00 0.00 2.75
3190 3259 0.036952 CACGTGCAACCTCCTCATCT 60.037 55.000 0.82 0.00 0.00 2.90
3191 3260 0.037326 TCACGTGCAACCTCCTCATC 60.037 55.000 11.67 0.00 0.00 2.92
3192 3261 0.396435 TTCACGTGCAACCTCCTCAT 59.604 50.000 11.67 0.00 0.00 2.90
3193 3262 0.249868 CTTCACGTGCAACCTCCTCA 60.250 55.000 11.67 0.00 0.00 3.86
3194 3263 1.569479 GCTTCACGTGCAACCTCCTC 61.569 60.000 11.67 0.00 0.00 3.71
3195 3264 1.598130 GCTTCACGTGCAACCTCCT 60.598 57.895 11.67 0.00 0.00 3.69
3196 3265 2.617274 GGCTTCACGTGCAACCTCC 61.617 63.158 11.67 2.14 0.00 4.30
3197 3266 2.617274 GGGCTTCACGTGCAACCTC 61.617 63.158 11.67 2.50 0.00 3.85
3198 3267 2.594592 GGGCTTCACGTGCAACCT 60.595 61.111 11.67 0.00 0.00 3.50
3199 3268 3.670377 GGGGCTTCACGTGCAACC 61.670 66.667 11.67 11.21 0.00 3.77
3200 3269 3.670377 GGGGGCTTCACGTGCAAC 61.670 66.667 11.67 1.54 0.00 4.17
3201 3270 3.884774 AGGGGGCTTCACGTGCAA 61.885 61.111 11.67 5.49 0.00 4.08
3202 3271 4.641645 CAGGGGGCTTCACGTGCA 62.642 66.667 11.67 0.00 0.00 4.57
3203 3272 4.329545 TCAGGGGGCTTCACGTGC 62.330 66.667 11.67 0.00 0.00 5.34
3204 3273 2.046892 CTCAGGGGGCTTCACGTG 60.047 66.667 9.94 9.94 0.00 4.49
3205 3274 3.322466 CCTCAGGGGGCTTCACGT 61.322 66.667 0.00 0.00 0.00 4.49
3215 3284 0.327000 AATCCAGGACTCCCTCAGGG 60.327 60.000 1.80 1.80 42.02 4.45
3216 3285 2.324541 CTAATCCAGGACTCCCTCAGG 58.675 57.143 0.00 0.00 42.02 3.86
3248 3317 2.644555 ATATCACACAGCCGGACGCC 62.645 60.000 5.05 0.00 38.78 5.68
3249 3318 1.227263 ATATCACACAGCCGGACGC 60.227 57.895 5.05 0.00 37.98 5.19
3250 3319 0.875908 CCATATCACACAGCCGGACG 60.876 60.000 5.05 0.00 0.00 4.79
3251 3320 0.532862 CCCATATCACACAGCCGGAC 60.533 60.000 5.05 0.00 0.00 4.79
3252 3321 1.829456 CCCATATCACACAGCCGGA 59.171 57.895 5.05 0.00 0.00 5.14
3253 3322 1.893808 GCCCATATCACACAGCCGG 60.894 63.158 0.00 0.00 0.00 6.13
3254 3323 1.893808 GGCCCATATCACACAGCCG 60.894 63.158 0.00 0.00 0.00 5.52
3255 3324 1.893808 CGGCCCATATCACACAGCC 60.894 63.158 0.00 0.00 37.03 4.85
3256 3325 1.893808 CCGGCCCATATCACACAGC 60.894 63.158 0.00 0.00 0.00 4.40
3257 3326 0.532862 GTCCGGCCCATATCACACAG 60.533 60.000 0.00 0.00 0.00 3.66
3258 3327 0.980754 AGTCCGGCCCATATCACACA 60.981 55.000 0.00 0.00 0.00 3.72
3259 3328 0.532862 CAGTCCGGCCCATATCACAC 60.533 60.000 0.00 0.00 0.00 3.82
3260 3329 0.689412 TCAGTCCGGCCCATATCACA 60.689 55.000 0.00 0.00 0.00 3.58
3261 3330 0.687354 ATCAGTCCGGCCCATATCAC 59.313 55.000 0.00 0.00 0.00 3.06
3262 3331 0.686789 CATCAGTCCGGCCCATATCA 59.313 55.000 0.00 0.00 0.00 2.15
3263 3332 0.036010 CCATCAGTCCGGCCCATATC 60.036 60.000 0.00 0.00 0.00 1.63
3264 3333 0.473694 TCCATCAGTCCGGCCCATAT 60.474 55.000 0.00 0.00 0.00 1.78
3265 3334 1.074850 TCCATCAGTCCGGCCCATA 60.075 57.895 0.00 0.00 0.00 2.74
3266 3335 2.366837 TCCATCAGTCCGGCCCAT 60.367 61.111 0.00 0.00 0.00 4.00
3267 3336 3.399181 GTCCATCAGTCCGGCCCA 61.399 66.667 0.00 0.00 0.00 5.36
3268 3337 4.176752 GGTCCATCAGTCCGGCCC 62.177 72.222 0.00 0.00 0.00 5.80
3269 3338 4.530857 CGGTCCATCAGTCCGGCC 62.531 72.222 0.00 0.00 40.49 6.13
3273 3342 0.895530 TCTTCACGGTCCATCAGTCC 59.104 55.000 0.00 0.00 0.00 3.85
3274 3343 2.969628 ATCTTCACGGTCCATCAGTC 57.030 50.000 0.00 0.00 0.00 3.51
3275 3344 3.096852 TGTATCTTCACGGTCCATCAGT 58.903 45.455 0.00 0.00 0.00 3.41
3276 3345 3.801114 TGTATCTTCACGGTCCATCAG 57.199 47.619 0.00 0.00 0.00 2.90
3277 3346 3.118775 CCTTGTATCTTCACGGTCCATCA 60.119 47.826 0.00 0.00 0.00 3.07
3278 3347 3.118738 ACCTTGTATCTTCACGGTCCATC 60.119 47.826 0.00 0.00 35.52 3.51
3279 3348 2.838202 ACCTTGTATCTTCACGGTCCAT 59.162 45.455 0.00 0.00 35.52 3.41
3280 3349 2.253610 ACCTTGTATCTTCACGGTCCA 58.746 47.619 0.00 0.00 35.52 4.02
3281 3350 3.698040 TCTACCTTGTATCTTCACGGTCC 59.302 47.826 0.00 0.00 39.89 4.46
3282 3351 4.978083 TCTACCTTGTATCTTCACGGTC 57.022 45.455 0.00 0.00 39.89 4.79
3283 3352 4.159879 CCTTCTACCTTGTATCTTCACGGT 59.840 45.833 0.00 0.00 41.62 4.83
3284 3353 4.683832 CCTTCTACCTTGTATCTTCACGG 58.316 47.826 0.00 0.00 33.72 4.94
3285 3354 4.113354 GCCTTCTACCTTGTATCTTCACG 58.887 47.826 0.00 0.00 0.00 4.35
3286 3355 4.162509 AGGCCTTCTACCTTGTATCTTCAC 59.837 45.833 0.00 0.00 31.87 3.18
3287 3356 4.362677 AGGCCTTCTACCTTGTATCTTCA 58.637 43.478 0.00 0.00 31.87 3.02
3288 3357 5.360649 AAGGCCTTCTACCTTGTATCTTC 57.639 43.478 13.78 0.00 45.88 2.87
3297 3366 1.307953 GGGGGAAGGCCTTCTACCT 60.308 63.158 36.47 14.49 39.45 3.08
3298 3367 0.994050 ATGGGGGAAGGCCTTCTACC 60.994 60.000 37.72 35.40 39.45 3.18
3299 3368 0.183731 CATGGGGGAAGGCCTTCTAC 59.816 60.000 37.72 30.24 39.45 2.59
3300 3369 0.253630 ACATGGGGGAAGGCCTTCTA 60.254 55.000 37.72 24.21 39.45 2.10
3301 3370 1.544917 ACATGGGGGAAGGCCTTCT 60.545 57.895 37.72 20.17 39.45 2.85
3302 3371 1.076705 GACATGGGGGAAGGCCTTC 60.077 63.158 33.67 33.67 38.80 3.46
3303 3372 2.626467 GGACATGGGGGAAGGCCTT 61.626 63.158 20.65 20.65 0.00 4.35
3304 3373 3.023735 GGACATGGGGGAAGGCCT 61.024 66.667 0.00 0.00 0.00 5.19
3305 3374 4.506255 CGGACATGGGGGAAGGCC 62.506 72.222 0.00 0.00 0.00 5.19
3306 3375 4.506255 CCGGACATGGGGGAAGGC 62.506 72.222 0.00 0.00 0.00 4.35
3307 3376 2.078665 ATCCGGACATGGGGGAAGG 61.079 63.158 6.12 0.00 32.71 3.46
3308 3377 1.149174 CATCCGGACATGGGGGAAG 59.851 63.158 6.12 0.00 32.71 3.46
3309 3378 2.382770 CCATCCGGACATGGGGGAA 61.383 63.158 15.34 0.00 39.95 3.97
3310 3379 2.772191 CCATCCGGACATGGGGGA 60.772 66.667 15.34 0.40 39.95 4.81
3322 3391 1.369321 GCATCGGAGAGTCCCATCC 59.631 63.158 0.00 0.00 43.63 3.51
3323 3392 1.006805 CGCATCGGAGAGTCCCATC 60.007 63.158 0.00 0.00 43.63 3.51
3324 3393 1.758514 ACGCATCGGAGAGTCCCAT 60.759 57.895 0.00 0.00 43.63 4.00
3325 3394 2.362503 ACGCATCGGAGAGTCCCA 60.363 61.111 0.00 0.00 43.63 4.37
3326 3395 2.105128 CACGCATCGGAGAGTCCC 59.895 66.667 0.00 0.00 43.63 4.46
3327 3396 1.739338 ATCCACGCATCGGAGAGTCC 61.739 60.000 0.00 0.00 43.63 3.85
3328 3397 0.596083 CATCCACGCATCGGAGAGTC 60.596 60.000 0.00 0.00 43.63 3.36
3329 3398 1.439228 CATCCACGCATCGGAGAGT 59.561 57.895 0.00 0.00 43.63 3.24
3330 3399 1.300465 CCATCCACGCATCGGAGAG 60.300 63.158 0.00 0.00 43.63 3.20
3331 3400 2.814604 CCATCCACGCATCGGAGA 59.185 61.111 0.00 0.00 45.75 3.71
3332 3401 2.969238 GCCATCCACGCATCGGAG 60.969 66.667 0.00 0.00 35.56 4.63
3333 3402 2.811542 TTTGCCATCCACGCATCGGA 62.812 55.000 0.00 0.00 35.83 4.55
3334 3403 1.932011 TTTTGCCATCCACGCATCGG 61.932 55.000 0.00 0.00 35.83 4.18
3335 3404 0.101040 ATTTTGCCATCCACGCATCG 59.899 50.000 0.00 0.00 35.83 3.84
3336 3405 1.928503 CAATTTTGCCATCCACGCATC 59.071 47.619 0.00 0.00 35.83 3.91
3337 3406 1.405797 CCAATTTTGCCATCCACGCAT 60.406 47.619 0.00 0.00 35.83 4.73
3338 3407 0.037512 CCAATTTTGCCATCCACGCA 60.038 50.000 0.00 0.00 0.00 5.24
3339 3408 1.360931 GCCAATTTTGCCATCCACGC 61.361 55.000 0.00 0.00 0.00 5.34
3340 3409 1.077645 CGCCAATTTTGCCATCCACG 61.078 55.000 0.00 0.00 0.00 4.94
3341 3410 0.037419 ACGCCAATTTTGCCATCCAC 60.037 50.000 0.00 0.00 0.00 4.02
3342 3411 0.246086 GACGCCAATTTTGCCATCCA 59.754 50.000 0.00 0.00 0.00 3.41
3343 3412 0.460109 GGACGCCAATTTTGCCATCC 60.460 55.000 0.00 1.10 0.00 3.51
3344 3413 0.246086 TGGACGCCAATTTTGCCATC 59.754 50.000 0.00 0.00 0.00 3.51
3345 3414 0.683973 TTGGACGCCAATTTTGCCAT 59.316 45.000 7.15 0.00 38.75 4.40
3346 3415 0.465705 TTTGGACGCCAATTTTGCCA 59.534 45.000 11.30 0.00 43.55 4.92
3347 3416 1.807139 ATTTGGACGCCAATTTTGCC 58.193 45.000 11.30 0.00 43.55 4.52
3348 3417 2.344142 CGTATTTGGACGCCAATTTTGC 59.656 45.455 11.30 4.36 43.55 3.68
3349 3418 3.570559 ACGTATTTGGACGCCAATTTTG 58.429 40.909 11.30 6.18 46.87 2.44
3350 3419 3.926821 ACGTATTTGGACGCCAATTTT 57.073 38.095 11.30 4.16 46.87 1.82
3351 3420 5.570234 ATTACGTATTTGGACGCCAATTT 57.430 34.783 11.30 6.14 46.87 1.82
3352 3421 5.570234 AATTACGTATTTGGACGCCAATT 57.430 34.783 11.30 10.43 46.87 2.32
3353 3422 5.449451 GGAAATTACGTATTTGGACGCCAAT 60.449 40.000 11.30 5.78 46.87 3.16
3354 3423 4.142643 GGAAATTACGTATTTGGACGCCAA 60.143 41.667 7.15 7.15 46.87 4.52
3355 3424 3.374678 GGAAATTACGTATTTGGACGCCA 59.625 43.478 0.00 0.00 46.87 5.69
3356 3425 3.624410 AGGAAATTACGTATTTGGACGCC 59.376 43.478 0.00 0.00 46.87 5.68
3357 3426 4.870221 AGGAAATTACGTATTTGGACGC 57.130 40.909 0.00 0.00 46.87 5.19
3359 3428 9.124807 CAGAAAAAGGAAATTACGTATTTGGAC 57.875 33.333 0.00 0.00 36.59 4.02
3360 3429 7.810759 GCAGAAAAAGGAAATTACGTATTTGGA 59.189 33.333 0.00 0.00 36.59 3.53
3361 3430 7.596995 TGCAGAAAAAGGAAATTACGTATTTGG 59.403 33.333 0.00 0.00 36.59 3.28
3362 3431 8.514136 TGCAGAAAAAGGAAATTACGTATTTG 57.486 30.769 0.00 0.00 36.59 2.32
3363 3432 9.191995 CTTGCAGAAAAAGGAAATTACGTATTT 57.808 29.630 0.00 0.00 39.15 1.40
3364 3433 7.328493 GCTTGCAGAAAAAGGAAATTACGTATT 59.672 33.333 0.00 0.00 0.00 1.89
3365 3434 6.806739 GCTTGCAGAAAAAGGAAATTACGTAT 59.193 34.615 0.00 0.00 0.00 3.06
3366 3435 6.146898 GCTTGCAGAAAAAGGAAATTACGTA 58.853 36.000 0.00 0.00 0.00 3.57
3367 3436 4.982295 GCTTGCAGAAAAAGGAAATTACGT 59.018 37.500 0.00 0.00 0.00 3.57
3368 3437 4.385748 GGCTTGCAGAAAAAGGAAATTACG 59.614 41.667 0.00 0.00 0.00 3.18
3369 3438 4.385748 CGGCTTGCAGAAAAAGGAAATTAC 59.614 41.667 0.00 0.00 0.00 1.89
3370 3439 4.279671 TCGGCTTGCAGAAAAAGGAAATTA 59.720 37.500 0.00 0.00 0.00 1.40
3371 3440 3.069443 TCGGCTTGCAGAAAAAGGAAATT 59.931 39.130 0.00 0.00 0.00 1.82
3372 3441 2.627699 TCGGCTTGCAGAAAAAGGAAAT 59.372 40.909 0.00 0.00 0.00 2.17
3373 3442 2.028130 TCGGCTTGCAGAAAAAGGAAA 58.972 42.857 0.00 0.00 0.00 3.13
3374 3443 1.336755 GTCGGCTTGCAGAAAAAGGAA 59.663 47.619 0.00 0.00 0.00 3.36
3375 3444 0.951558 GTCGGCTTGCAGAAAAAGGA 59.048 50.000 0.00 0.00 0.00 3.36
3376 3445 0.954452 AGTCGGCTTGCAGAAAAAGG 59.046 50.000 0.00 0.00 0.00 3.11
3377 3446 1.876156 AGAGTCGGCTTGCAGAAAAAG 59.124 47.619 0.00 0.00 0.00 2.27
3378 3447 1.603802 CAGAGTCGGCTTGCAGAAAAA 59.396 47.619 0.00 0.00 0.00 1.94
3379 3448 1.229428 CAGAGTCGGCTTGCAGAAAA 58.771 50.000 0.00 0.00 0.00 2.29
3380 3449 0.106708 ACAGAGTCGGCTTGCAGAAA 59.893 50.000 0.00 0.00 0.00 2.52
3381 3450 0.966179 TACAGAGTCGGCTTGCAGAA 59.034 50.000 0.00 0.00 0.00 3.02
3382 3451 0.243907 GTACAGAGTCGGCTTGCAGA 59.756 55.000 0.00 0.00 0.00 4.26
3383 3452 0.038251 TGTACAGAGTCGGCTTGCAG 60.038 55.000 0.00 0.00 0.00 4.41
3384 3453 0.391228 TTGTACAGAGTCGGCTTGCA 59.609 50.000 0.00 0.00 0.00 4.08
3385 3454 0.790814 GTTGTACAGAGTCGGCTTGC 59.209 55.000 0.00 0.00 0.00 4.01
3386 3455 1.429463 GGTTGTACAGAGTCGGCTTG 58.571 55.000 0.00 0.00 0.00 4.01
3387 3456 0.320697 GGGTTGTACAGAGTCGGCTT 59.679 55.000 0.00 0.00 0.00 4.35
3388 3457 0.542232 AGGGTTGTACAGAGTCGGCT 60.542 55.000 0.00 0.00 0.00 5.52
3389 3458 1.134560 CTAGGGTTGTACAGAGTCGGC 59.865 57.143 0.00 0.00 0.00 5.54
3390 3459 1.749634 CCTAGGGTTGTACAGAGTCGG 59.250 57.143 0.00 0.00 0.00 4.79
3391 3460 1.134560 GCCTAGGGTTGTACAGAGTCG 59.865 57.143 11.72 0.00 0.00 4.18
3392 3461 1.481363 GGCCTAGGGTTGTACAGAGTC 59.519 57.143 11.72 0.00 0.00 3.36
3393 3462 1.569653 GGCCTAGGGTTGTACAGAGT 58.430 55.000 11.72 0.00 0.00 3.24
3394 3463 0.831307 GGGCCTAGGGTTGTACAGAG 59.169 60.000 11.72 0.00 0.00 3.35
3395 3464 0.619543 GGGGCCTAGGGTTGTACAGA 60.620 60.000 11.72 0.00 0.00 3.41
3396 3465 0.620700 AGGGGCCTAGGGTTGTACAG 60.621 60.000 11.72 0.00 0.00 2.74
3397 3466 0.619543 GAGGGGCCTAGGGTTGTACA 60.620 60.000 11.72 0.00 0.00 2.90
3398 3467 1.343431 GGAGGGGCCTAGGGTTGTAC 61.343 65.000 11.72 0.00 0.00 2.90
3399 3468 1.003835 GGAGGGGCCTAGGGTTGTA 59.996 63.158 11.72 0.00 0.00 2.41
3400 3469 2.286197 GGAGGGGCCTAGGGTTGT 60.286 66.667 11.72 0.00 0.00 3.32
3401 3470 3.480133 CGGAGGGGCCTAGGGTTG 61.480 72.222 11.72 0.00 0.00 3.77
3418 3487 3.899980 ACCCTCCGGTTTATATAGACACC 59.100 47.826 0.00 2.59 40.58 4.16
3434 3503 2.030371 CCTCTACGGACTAAACCCTCC 58.970 57.143 0.00 0.00 33.16 4.30
3435 3504 1.408340 GCCTCTACGGACTAAACCCTC 59.592 57.143 0.00 0.00 33.16 4.30
3436 3505 1.006878 AGCCTCTACGGACTAAACCCT 59.993 52.381 0.00 0.00 33.16 4.34
3437 3506 1.482954 AGCCTCTACGGACTAAACCC 58.517 55.000 0.00 0.00 33.16 4.11
3438 3507 3.887716 TGATAGCCTCTACGGACTAAACC 59.112 47.826 0.00 0.00 33.16 3.27
3439 3508 4.820716 TCTGATAGCCTCTACGGACTAAAC 59.179 45.833 0.00 0.00 33.16 2.01
3440 3509 5.045012 TCTGATAGCCTCTACGGACTAAA 57.955 43.478 0.00 0.00 33.16 1.85
3441 3510 4.701651 TCTGATAGCCTCTACGGACTAA 57.298 45.455 0.00 0.00 33.16 2.24
3442 3511 4.701651 TTCTGATAGCCTCTACGGACTA 57.298 45.455 0.00 0.00 33.16 2.59
3443 3512 3.579534 TTCTGATAGCCTCTACGGACT 57.420 47.619 0.00 0.00 33.16 3.85
3444 3513 4.278669 TGAATTCTGATAGCCTCTACGGAC 59.721 45.833 7.05 0.00 33.16 4.79
3445 3514 4.470602 TGAATTCTGATAGCCTCTACGGA 58.529 43.478 7.05 0.00 33.16 4.69
3446 3515 4.855715 TGAATTCTGATAGCCTCTACGG 57.144 45.455 7.05 0.00 0.00 4.02
3447 3516 8.349245 CCTATATGAATTCTGATAGCCTCTACG 58.651 40.741 16.04 0.00 0.00 3.51
3448 3517 8.141268 GCCTATATGAATTCTGATAGCCTCTAC 58.859 40.741 16.04 4.04 0.00 2.59
3449 3518 8.064389 AGCCTATATGAATTCTGATAGCCTCTA 58.936 37.037 16.04 0.00 0.00 2.43
3450 3519 6.902416 AGCCTATATGAATTCTGATAGCCTCT 59.098 38.462 16.04 11.55 0.00 3.69
3451 3520 7.123355 AGCCTATATGAATTCTGATAGCCTC 57.877 40.000 16.04 10.23 0.00 4.70
3452 3521 8.064389 TCTAGCCTATATGAATTCTGATAGCCT 58.936 37.037 16.04 14.14 0.00 4.58
3453 3522 8.141268 GTCTAGCCTATATGAATTCTGATAGCC 58.859 40.741 16.04 9.42 0.00 3.93
3454 3523 8.690884 TGTCTAGCCTATATGAATTCTGATAGC 58.309 37.037 16.04 12.90 0.00 2.97
3457 3526 9.491406 AGATGTCTAGCCTATATGAATTCTGAT 57.509 33.333 7.05 2.70 0.00 2.90
3458 3527 8.891985 AGATGTCTAGCCTATATGAATTCTGA 57.108 34.615 7.05 0.00 0.00 3.27
3460 3529 9.420118 CCTAGATGTCTAGCCTATATGAATTCT 57.580 37.037 7.05 0.00 43.47 2.40
3461 3530 8.637986 CCCTAGATGTCTAGCCTATATGAATTC 58.362 40.741 10.84 0.00 43.47 2.17
3462 3531 8.125733 ACCCTAGATGTCTAGCCTATATGAATT 58.874 37.037 10.84 0.00 43.47 2.17
3463 3532 7.657306 ACCCTAGATGTCTAGCCTATATGAAT 58.343 38.462 10.84 0.00 43.47 2.57
3464 3533 7.045693 ACCCTAGATGTCTAGCCTATATGAA 57.954 40.000 10.84 0.00 43.47 2.57
3465 3534 6.660147 ACCCTAGATGTCTAGCCTATATGA 57.340 41.667 10.84 0.00 43.47 2.15
3466 3535 7.726033 AAACCCTAGATGTCTAGCCTATATG 57.274 40.000 10.84 0.00 43.47 1.78
3467 3536 7.562088 GCTAAACCCTAGATGTCTAGCCTATAT 59.438 40.741 10.84 0.00 43.47 0.86
3468 3537 6.890814 GCTAAACCCTAGATGTCTAGCCTATA 59.109 42.308 10.84 2.61 43.47 1.31
3469 3538 5.717654 GCTAAACCCTAGATGTCTAGCCTAT 59.282 44.000 10.84 1.73 43.47 2.57
3470 3539 5.078256 GCTAAACCCTAGATGTCTAGCCTA 58.922 45.833 10.84 0.65 43.47 3.93
3471 3540 3.898741 GCTAAACCCTAGATGTCTAGCCT 59.101 47.826 10.84 0.00 43.47 4.58
3472 3541 3.007074 GGCTAAACCCTAGATGTCTAGCC 59.993 52.174 16.28 16.28 43.47 3.93
3473 3542 3.641906 TGGCTAAACCCTAGATGTCTAGC 59.358 47.826 10.84 8.43 43.47 3.42
3474 3543 6.426646 AATGGCTAAACCCTAGATGTCTAG 57.573 41.667 9.59 9.59 44.22 2.43
3475 3544 6.015688 CGTAATGGCTAAACCCTAGATGTCTA 60.016 42.308 0.00 0.00 37.83 2.59
3476 3545 5.221461 CGTAATGGCTAAACCCTAGATGTCT 60.221 44.000 0.00 0.00 37.83 3.41
3477 3546 4.989168 CGTAATGGCTAAACCCTAGATGTC 59.011 45.833 0.00 0.00 37.83 3.06
3478 3547 4.652421 TCGTAATGGCTAAACCCTAGATGT 59.348 41.667 0.00 0.00 37.83 3.06
3479 3548 5.209818 TCGTAATGGCTAAACCCTAGATG 57.790 43.478 0.00 0.00 37.83 2.90
3480 3549 5.780793 AGATCGTAATGGCTAAACCCTAGAT 59.219 40.000 0.00 0.00 37.83 1.98
3481 3550 5.145564 AGATCGTAATGGCTAAACCCTAGA 58.854 41.667 0.00 0.00 37.83 2.43
3482 3551 5.470047 AGATCGTAATGGCTAAACCCTAG 57.530 43.478 0.00 0.00 37.83 3.02
3483 3552 4.022589 CGAGATCGTAATGGCTAAACCCTA 60.023 45.833 0.00 0.00 33.83 3.53
3484 3553 3.243771 CGAGATCGTAATGGCTAAACCCT 60.244 47.826 0.00 0.00 33.83 4.34
3485 3554 3.057734 CGAGATCGTAATGGCTAAACCC 58.942 50.000 0.00 0.00 33.83 4.11
3486 3555 3.973657 TCGAGATCGTAATGGCTAAACC 58.026 45.455 1.70 0.00 40.80 3.27
3487 3556 3.982058 CCTCGAGATCGTAATGGCTAAAC 59.018 47.826 15.71 0.00 40.80 2.01
3488 3557 3.635373 ACCTCGAGATCGTAATGGCTAAA 59.365 43.478 15.71 0.00 40.80 1.85
3489 3558 3.220110 ACCTCGAGATCGTAATGGCTAA 58.780 45.455 15.71 0.00 40.80 3.09
3490 3559 2.860009 ACCTCGAGATCGTAATGGCTA 58.140 47.619 15.71 0.00 40.80 3.93
3491 3560 1.693627 ACCTCGAGATCGTAATGGCT 58.306 50.000 15.71 0.00 40.80 4.75
3492 3561 2.812591 TCTACCTCGAGATCGTAATGGC 59.187 50.000 15.71 0.00 40.80 4.40
3493 3562 5.224562 GATCTACCTCGAGATCGTAATGG 57.775 47.826 15.71 0.00 41.79 3.16
3501 3570 5.197451 ACAAGAGTTGATCTACCTCGAGAT 58.803 41.667 15.71 0.00 37.23 2.75
3502 3571 4.590918 ACAAGAGTTGATCTACCTCGAGA 58.409 43.478 15.71 0.00 37.23 4.04
3503 3572 4.974368 ACAAGAGTTGATCTACCTCGAG 57.026 45.455 5.13 5.13 37.23 4.04
3504 3573 5.125097 GGTTACAAGAGTTGATCTACCTCGA 59.875 44.000 3.54 0.00 37.23 4.04
3505 3574 5.341617 GGTTACAAGAGTTGATCTACCTCG 58.658 45.833 3.54 0.00 37.23 4.63
3506 3575 5.395435 GGGGTTACAAGAGTTGATCTACCTC 60.395 48.000 3.54 1.73 37.23 3.85
3507 3576 4.470304 GGGGTTACAAGAGTTGATCTACCT 59.530 45.833 3.54 0.00 37.23 3.08
3508 3577 4.470304 AGGGGTTACAAGAGTTGATCTACC 59.530 45.833 3.54 0.00 37.23 3.18
3509 3578 5.678955 AGGGGTTACAAGAGTTGATCTAC 57.321 43.478 0.00 0.00 37.23 2.59
3510 3579 8.287350 AGTATAGGGGTTACAAGAGTTGATCTA 58.713 37.037 0.00 0.00 37.23 1.98
3511 3580 7.133483 AGTATAGGGGTTACAAGAGTTGATCT 58.867 38.462 0.00 0.00 41.27 2.75
3512 3581 7.069578 TGAGTATAGGGGTTACAAGAGTTGATC 59.930 40.741 0.00 0.00 0.00 2.92
3513 3582 6.901300 TGAGTATAGGGGTTACAAGAGTTGAT 59.099 38.462 0.00 0.00 0.00 2.57
3514 3583 6.258354 TGAGTATAGGGGTTACAAGAGTTGA 58.742 40.000 0.00 0.00 0.00 3.18
3515 3584 6.540438 TGAGTATAGGGGTTACAAGAGTTG 57.460 41.667 0.00 0.00 0.00 3.16
3516 3585 6.901300 TGATGAGTATAGGGGTTACAAGAGTT 59.099 38.462 0.00 0.00 0.00 3.01
3517 3586 6.441222 TGATGAGTATAGGGGTTACAAGAGT 58.559 40.000 0.00 0.00 0.00 3.24
3518 3587 6.978674 TGATGAGTATAGGGGTTACAAGAG 57.021 41.667 0.00 0.00 0.00 2.85
3519 3588 7.402071 ACTTTGATGAGTATAGGGGTTACAAGA 59.598 37.037 0.00 0.00 0.00 3.02
3520 3589 7.565680 ACTTTGATGAGTATAGGGGTTACAAG 58.434 38.462 0.00 0.00 0.00 3.16
3521 3590 7.181305 TGACTTTGATGAGTATAGGGGTTACAA 59.819 37.037 0.00 0.00 0.00 2.41
3522 3591 6.670464 TGACTTTGATGAGTATAGGGGTTACA 59.330 38.462 0.00 0.00 0.00 2.41
3523 3592 7.120923 TGACTTTGATGAGTATAGGGGTTAC 57.879 40.000 0.00 0.00 0.00 2.50
3524 3593 7.743116 TTGACTTTGATGAGTATAGGGGTTA 57.257 36.000 0.00 0.00 0.00 2.85
3525 3594 6.636454 TTGACTTTGATGAGTATAGGGGTT 57.364 37.500 0.00 0.00 0.00 4.11
3526 3595 6.386927 TGATTGACTTTGATGAGTATAGGGGT 59.613 38.462 0.00 0.00 0.00 4.95
3527 3596 6.830912 TGATTGACTTTGATGAGTATAGGGG 58.169 40.000 0.00 0.00 0.00 4.79
3528 3597 7.041508 GCTTGATTGACTTTGATGAGTATAGGG 60.042 40.741 0.00 0.00 0.00 3.53
3529 3598 7.496920 TGCTTGATTGACTTTGATGAGTATAGG 59.503 37.037 0.00 0.00 0.00 2.57
3530 3599 8.429493 TGCTTGATTGACTTTGATGAGTATAG 57.571 34.615 0.00 0.00 0.00 1.31
3531 3600 7.496920 CCTGCTTGATTGACTTTGATGAGTATA 59.503 37.037 0.00 0.00 0.00 1.47
3532 3601 6.318144 CCTGCTTGATTGACTTTGATGAGTAT 59.682 38.462 0.00 0.00 0.00 2.12
3533 3602 5.645067 CCTGCTTGATTGACTTTGATGAGTA 59.355 40.000 0.00 0.00 0.00 2.59
3534 3603 4.458295 CCTGCTTGATTGACTTTGATGAGT 59.542 41.667 0.00 0.00 0.00 3.41
3535 3604 4.698780 TCCTGCTTGATTGACTTTGATGAG 59.301 41.667 0.00 0.00 0.00 2.90
3536 3605 4.654915 TCCTGCTTGATTGACTTTGATGA 58.345 39.130 0.00 0.00 0.00 2.92
3537 3606 5.048224 ACTTCCTGCTTGATTGACTTTGATG 60.048 40.000 0.00 0.00 0.00 3.07
3538 3607 5.075493 ACTTCCTGCTTGATTGACTTTGAT 58.925 37.500 0.00 0.00 0.00 2.57
3539 3608 4.464008 ACTTCCTGCTTGATTGACTTTGA 58.536 39.130 0.00 0.00 0.00 2.69
3540 3609 4.843220 ACTTCCTGCTTGATTGACTTTG 57.157 40.909 0.00 0.00 0.00 2.77
3541 3610 5.869579 TCTACTTCCTGCTTGATTGACTTT 58.130 37.500 0.00 0.00 0.00 2.66
3542 3611 5.012561 ACTCTACTTCCTGCTTGATTGACTT 59.987 40.000 0.00 0.00 0.00 3.01
3543 3612 4.530161 ACTCTACTTCCTGCTTGATTGACT 59.470 41.667 0.00 0.00 0.00 3.41
3544 3613 4.826556 ACTCTACTTCCTGCTTGATTGAC 58.173 43.478 0.00 0.00 0.00 3.18
3545 3614 5.489792 AACTCTACTTCCTGCTTGATTGA 57.510 39.130 0.00 0.00 0.00 2.57
3546 3615 6.566197 AAAACTCTACTTCCTGCTTGATTG 57.434 37.500 0.00 0.00 0.00 2.67
3547 3616 6.655425 GGTAAAACTCTACTTCCTGCTTGATT 59.345 38.462 0.00 0.00 0.00 2.57
3548 3617 6.013293 AGGTAAAACTCTACTTCCTGCTTGAT 60.013 38.462 0.00 0.00 0.00 2.57
3549 3618 5.307196 AGGTAAAACTCTACTTCCTGCTTGA 59.693 40.000 0.00 0.00 0.00 3.02
3550 3619 5.552178 AGGTAAAACTCTACTTCCTGCTTG 58.448 41.667 0.00 0.00 0.00 4.01
3551 3620 5.280062 GGAGGTAAAACTCTACTTCCTGCTT 60.280 44.000 5.03 0.00 42.18 3.91
3552 3621 4.223255 GGAGGTAAAACTCTACTTCCTGCT 59.777 45.833 5.03 0.00 42.18 4.24
3553 3622 4.020485 TGGAGGTAAAACTCTACTTCCTGC 60.020 45.833 11.71 0.00 44.50 4.85
3554 3623 5.740290 TGGAGGTAAAACTCTACTTCCTG 57.260 43.478 11.71 0.00 44.50 3.86
3555 3624 6.954352 AATGGAGGTAAAACTCTACTTCCT 57.046 37.500 11.71 0.00 44.50 3.36
3556 3625 8.537858 TCTTAATGGAGGTAAAACTCTACTTCC 58.462 37.037 5.26 5.26 44.47 3.46
3557 3626 9.589111 CTCTTAATGGAGGTAAAACTCTACTTC 57.411 37.037 0.00 0.00 37.63 3.01
3558 3627 8.541234 CCTCTTAATGGAGGTAAAACTCTACTT 58.459 37.037 3.13 0.00 45.65 2.24
3559 3628 8.080363 CCTCTTAATGGAGGTAAAACTCTACT 57.920 38.462 3.13 0.00 45.65 2.57
3572 3641 2.379005 GTTTGGGCCCTCTTAATGGAG 58.621 52.381 25.70 0.00 0.00 3.86
3573 3642 1.006639 GGTTTGGGCCCTCTTAATGGA 59.993 52.381 25.70 0.00 0.00 3.41
3574 3643 1.007118 AGGTTTGGGCCCTCTTAATGG 59.993 52.381 25.70 0.00 0.00 3.16
3575 3644 2.102578 CAGGTTTGGGCCCTCTTAATG 58.897 52.381 25.70 11.09 0.00 1.90
3576 3645 1.007118 CCAGGTTTGGGCCCTCTTAAT 59.993 52.381 25.70 1.19 41.05 1.40
3577 3646 0.407918 CCAGGTTTGGGCCCTCTTAA 59.592 55.000 25.70 5.59 41.05 1.85
3578 3647 2.083715 CCAGGTTTGGGCCCTCTTA 58.916 57.895 25.70 0.00 41.05 2.10
3579 3648 2.854076 CCAGGTTTGGGCCCTCTT 59.146 61.111 25.70 7.18 41.05 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.