Multiple sequence alignment - TraesCS5D01G211600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G211600 chr5D 100.000 2288 0 0 1 2288 320315859 320318146 0.000000e+00 4226.0
1 TraesCS5D01G211600 chr5A 91.226 775 34 15 30 781 414160661 414159898 0.000000e+00 1024.0
2 TraesCS5D01G211600 chr5A 82.952 481 45 11 1315 1768 414159868 414159398 1.270000e-107 399.0
3 TraesCS5D01G211600 chr5B 85.961 812 39 35 1 781 371194166 371194933 0.000000e+00 798.0
4 TraesCS5D01G211600 chr5B 90.485 515 24 6 1311 1818 371194959 371195455 0.000000e+00 656.0
5 TraesCS5D01G211600 chr6B 90.440 523 39 5 783 1303 45837625 45838138 0.000000e+00 678.0
6 TraesCS5D01G211600 chr6B 82.674 531 86 6 791 1318 21781187 21781714 1.240000e-127 466.0
7 TraesCS5D01G211600 chr6B 91.039 279 24 1 805 1082 142823022 142823300 2.150000e-100 375.0
8 TraesCS5D01G211600 chr6B 86.957 276 23 6 1038 1311 142823298 142823562 4.780000e-77 298.0
9 TraesCS5D01G211600 chr6B 95.122 41 2 0 1271 1311 405325316 405325356 5.280000e-07 65.8
10 TraesCS5D01G211600 chr6A 84.032 501 75 5 802 1300 13379632 13380129 5.720000e-131 477.0
11 TraesCS5D01G211600 chr6D 82.812 512 85 3 802 1311 11884792 11885302 2.680000e-124 455.0
12 TraesCS5D01G211600 chr7D 90.244 246 23 1 1067 1312 421147124 421146880 1.020000e-83 320.0
13 TraesCS5D01G211600 chr2D 92.857 168 11 1 1145 1311 36201177 36201344 2.270000e-60 243.0
14 TraesCS5D01G211600 chr7B 77.027 296 62 6 917 1209 433881925 433881633 5.060000e-37 165.0
15 TraesCS5D01G211600 chr2A 75.000 340 82 3 886 1224 208582218 208581881 1.090000e-33 154.0
16 TraesCS5D01G211600 chr2A 73.041 434 110 5 836 1265 747258559 747258989 1.830000e-31 147.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G211600 chr5D 320315859 320318146 2287 False 4226.0 4226 100.000 1 2288 1 chr5D.!!$F1 2287
1 TraesCS5D01G211600 chr5A 414159398 414160661 1263 True 711.5 1024 87.089 30 1768 2 chr5A.!!$R1 1738
2 TraesCS5D01G211600 chr5B 371194166 371195455 1289 False 727.0 798 88.223 1 1818 2 chr5B.!!$F1 1817
3 TraesCS5D01G211600 chr6B 45837625 45838138 513 False 678.0 678 90.440 783 1303 1 chr6B.!!$F2 520
4 TraesCS5D01G211600 chr6B 21781187 21781714 527 False 466.0 466 82.674 791 1318 1 chr6B.!!$F1 527
5 TraesCS5D01G211600 chr6B 142823022 142823562 540 False 336.5 375 88.998 805 1311 2 chr6B.!!$F4 506
6 TraesCS5D01G211600 chr6D 11884792 11885302 510 False 455.0 455 82.812 802 1311 1 chr6D.!!$F1 509

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
851 891 0.312729 GTGGACGCGGGTTTTGATTT 59.687 50.0 12.47 0.0 0.0 2.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1977 2112 0.034059 CGTGAGGAGGAAGCACTTGT 59.966 55.0 0.0 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
48 50 1.048160 GGAGGAGAGAGCAGGGGAAG 61.048 65.000 0.00 0.00 0.00 3.46
49 51 1.002792 AGGAGAGAGCAGGGGAAGG 59.997 63.158 0.00 0.00 0.00 3.46
50 52 2.741055 GGAGAGAGCAGGGGAAGGC 61.741 68.421 0.00 0.00 0.00 4.35
51 53 1.688884 GAGAGAGCAGGGGAAGGCT 60.689 63.158 0.00 0.00 44.48 4.58
386 394 0.684805 AACAGCCCCGGTTGTGAAAA 60.685 50.000 3.80 0.00 39.43 2.29
391 425 3.056179 CAGCCCCGGTTGTGAAAATTAAT 60.056 43.478 0.00 0.00 0.00 1.40
394 428 4.865925 GCCCCGGTTGTGAAAATTAATAAC 59.134 41.667 0.00 0.00 0.00 1.89
397 431 5.575218 CCCGGTTGTGAAAATTAATAACAGC 59.425 40.000 0.00 0.00 0.00 4.40
398 432 5.575218 CCGGTTGTGAAAATTAATAACAGCC 59.425 40.000 12.47 12.47 38.38 4.85
399 433 5.575218 CGGTTGTGAAAATTAATAACAGCCC 59.425 40.000 14.87 9.11 38.48 5.19
421 455 4.657824 ACGTGCGGAACCAGGTCG 62.658 66.667 0.00 0.00 0.00 4.79
422 456 4.657824 CGTGCGGAACCAGGTCGT 62.658 66.667 0.00 0.00 0.00 4.34
423 457 2.652530 GTGCGGAACCAGGTCGTA 59.347 61.111 0.00 0.00 0.00 3.43
424 458 1.217244 GTGCGGAACCAGGTCGTAT 59.783 57.895 0.00 0.00 0.00 3.06
425 459 1.082117 GTGCGGAACCAGGTCGTATG 61.082 60.000 0.00 0.00 0.00 2.39
426 460 1.252215 TGCGGAACCAGGTCGTATGA 61.252 55.000 0.00 0.00 0.00 2.15
427 461 0.527817 GCGGAACCAGGTCGTATGAG 60.528 60.000 0.00 0.00 0.00 2.90
517 553 9.072294 GGACGGTACTTAAAATGAAATGAAATG 57.928 33.333 0.00 0.00 0.00 2.32
551 587 3.591196 TTGCAGTTGTTGATAATGGGC 57.409 42.857 0.00 0.00 0.00 5.36
647 683 7.616935 AGCTTGGGAAAGATCAATGAAAATCTA 59.383 33.333 0.00 0.00 32.01 1.98
678 718 8.523915 AAGATATGCCTTACAATTGATGACAA 57.476 30.769 13.59 0.00 40.42 3.18
735 775 6.206243 GGGATGTGGAGAGTAAATGATGATTG 59.794 42.308 0.00 0.00 0.00 2.67
754 794 7.136289 TGATTGTTGACGGTAAGGAAAATAC 57.864 36.000 0.00 0.00 0.00 1.89
756 796 4.630111 TGTTGACGGTAAGGAAAATACGT 58.370 39.130 0.00 0.00 0.00 3.57
851 891 0.312729 GTGGACGCGGGTTTTGATTT 59.687 50.000 12.47 0.00 0.00 2.17
884 926 2.046604 GACCGTGGGGGCTGTTAC 60.047 66.667 0.00 0.00 38.83 2.50
905 947 1.676014 CCGAGACCACAATGGGAAGTC 60.676 57.143 0.00 0.00 43.37 3.01
931 973 2.671914 GCCGCAGCAAATGAAAAGATGA 60.672 45.455 0.00 0.00 39.53 2.92
962 1004 6.825213 TGCTATGATTCATTTACAGCAGAAGT 59.175 34.615 14.83 0.00 30.08 3.01
1005 1047 3.449377 TGAATCTTGCACGTACTATGGGA 59.551 43.478 0.00 0.00 0.00 4.37
1039 1081 7.974482 ATTGAGATCAATTCGAATAGCATGA 57.026 32.000 11.83 11.66 43.48 3.07
1089 1173 2.673200 ATCATCGGTGGCCAGTGCT 61.673 57.895 5.11 0.00 37.74 4.40
1215 1301 5.013599 AGCTAGATTTTCACCTCCTTCTGTT 59.986 40.000 0.00 0.00 0.00 3.16
1238 1324 2.421388 GGATGGATTCAACACCGGATGA 60.421 50.000 9.46 6.88 0.00 2.92
1303 1390 7.333423 CGAGTGAATAAAGAGGTGATTTTGGTA 59.667 37.037 0.00 0.00 0.00 3.25
1306 1393 9.974980 GTGAATAAAGAGGTGATTTTGGTAAAA 57.025 29.630 0.00 0.00 34.41 1.52
1365 1452 7.662669 AGGAAAGTGAATTGGATGGAATTTTTG 59.337 33.333 0.00 0.00 0.00 2.44
1479 1574 2.592194 CACTTGATGCACATGCTTGAC 58.408 47.619 6.60 0.00 42.66 3.18
1482 1577 3.319972 ACTTGATGCACATGCTTGACTTT 59.680 39.130 6.60 0.00 42.66 2.66
1483 1578 4.520111 ACTTGATGCACATGCTTGACTTTA 59.480 37.500 6.60 0.00 42.66 1.85
1660 1782 6.770286 AAATATGGGTAGTCTGATGATGGT 57.230 37.500 0.00 0.00 0.00 3.55
1661 1783 7.872061 AAATATGGGTAGTCTGATGATGGTA 57.128 36.000 0.00 0.00 0.00 3.25
1662 1784 6.859112 ATATGGGTAGTCTGATGATGGTAC 57.141 41.667 0.00 0.00 0.00 3.34
1730 1865 9.965824 AGATTTGGTTGTAGTTTAATGTGAAAG 57.034 29.630 0.00 0.00 0.00 2.62
1818 1953 5.662657 GGGGGTATTCTTAGTAGTGTGGTTA 59.337 44.000 0.00 0.00 0.00 2.85
1819 1954 6.183360 GGGGGTATTCTTAGTAGTGTGGTTAG 60.183 46.154 0.00 0.00 0.00 2.34
1820 1955 6.382282 GGGGTATTCTTAGTAGTGTGGTTAGT 59.618 42.308 0.00 0.00 0.00 2.24
1821 1956 7.561356 GGGGTATTCTTAGTAGTGTGGTTAGTA 59.439 40.741 0.00 0.00 0.00 1.82
1822 1957 8.971073 GGGTATTCTTAGTAGTGTGGTTAGTAA 58.029 37.037 0.00 0.00 0.00 2.24
1824 1959 9.513727 GTATTCTTAGTAGTGTGGTTAGTAAGC 57.486 37.037 5.11 5.11 35.47 3.09
1825 1960 7.771927 TTCTTAGTAGTGTGGTTAGTAAGCT 57.228 36.000 12.98 0.00 35.47 3.74
1826 1961 7.771927 TCTTAGTAGTGTGGTTAGTAAGCTT 57.228 36.000 12.98 3.48 35.47 3.74
1827 1962 7.600065 TCTTAGTAGTGTGGTTAGTAAGCTTG 58.400 38.462 9.86 0.00 35.47 4.01
1828 1963 5.148651 AGTAGTGTGGTTAGTAAGCTTGG 57.851 43.478 9.86 0.00 0.00 3.61
1829 1964 2.779506 AGTGTGGTTAGTAAGCTTGGC 58.220 47.619 9.86 1.67 0.00 4.52
1830 1965 1.463444 GTGTGGTTAGTAAGCTTGGCG 59.537 52.381 9.86 0.00 0.00 5.69
1831 1966 1.071071 TGTGGTTAGTAAGCTTGGCGT 59.929 47.619 9.86 0.00 0.00 5.68
1832 1967 1.463444 GTGGTTAGTAAGCTTGGCGTG 59.537 52.381 9.86 0.00 0.00 5.34
1833 1968 1.071071 TGGTTAGTAAGCTTGGCGTGT 59.929 47.619 9.86 0.00 0.00 4.49
1834 1969 2.299582 TGGTTAGTAAGCTTGGCGTGTA 59.700 45.455 9.86 0.00 0.00 2.90
1835 1970 2.669924 GGTTAGTAAGCTTGGCGTGTAC 59.330 50.000 9.86 0.00 0.00 2.90
1836 1971 2.267188 TAGTAAGCTTGGCGTGTACG 57.733 50.000 9.86 0.00 43.27 3.67
1837 1972 0.599558 AGTAAGCTTGGCGTGTACGA 59.400 50.000 9.86 0.00 43.02 3.43
1860 1995 3.227147 GACCTTATGTCGATGATCGTCG 58.773 50.000 27.67 27.67 41.35 5.12
1861 1996 2.617308 ACCTTATGTCGATGATCGTCGT 59.383 45.455 30.74 17.98 41.35 4.34
1862 1997 3.811497 ACCTTATGTCGATGATCGTCGTA 59.189 43.478 30.74 22.66 41.35 3.43
1863 1998 4.149617 CCTTATGTCGATGATCGTCGTAC 58.850 47.826 30.74 25.92 41.35 3.67
1864 1999 4.319261 CCTTATGTCGATGATCGTCGTACA 60.319 45.833 30.74 29.36 41.35 2.90
1865 2000 2.447089 TGTCGATGATCGTCGTACAC 57.553 50.000 30.74 23.30 41.35 2.90
1866 2001 2.004733 TGTCGATGATCGTCGTACACT 58.995 47.619 30.74 0.00 41.35 3.55
1867 2002 2.417586 TGTCGATGATCGTCGTACACTT 59.582 45.455 30.74 0.00 41.35 3.16
1868 2003 2.776765 GTCGATGATCGTCGTACACTTG 59.223 50.000 30.74 6.55 41.35 3.16
1869 2004 2.674357 TCGATGATCGTCGTACACTTGA 59.326 45.455 30.74 11.33 41.35 3.02
1870 2005 2.776765 CGATGATCGTCGTACACTTGAC 59.223 50.000 25.78 0.00 36.88 3.18
1871 2006 3.726782 CGATGATCGTCGTACACTTGACA 60.727 47.826 25.78 0.00 36.88 3.58
1872 2007 3.629438 TGATCGTCGTACACTTGACAA 57.371 42.857 0.00 0.00 34.78 3.18
1873 2008 3.967401 TGATCGTCGTACACTTGACAAA 58.033 40.909 0.00 0.00 34.78 2.83
1874 2009 3.978855 TGATCGTCGTACACTTGACAAAG 59.021 43.478 0.00 0.00 39.49 2.77
1883 2018 2.684001 ACTTGACAAAGTGACACGGA 57.316 45.000 0.00 0.00 45.12 4.69
1884 2019 2.550978 ACTTGACAAAGTGACACGGAG 58.449 47.619 0.00 0.00 45.12 4.63
1885 2020 2.167693 ACTTGACAAAGTGACACGGAGA 59.832 45.455 0.00 0.00 45.12 3.71
1886 2021 3.181465 ACTTGACAAAGTGACACGGAGAT 60.181 43.478 0.00 0.00 45.12 2.75
1887 2022 2.754472 TGACAAAGTGACACGGAGATG 58.246 47.619 0.00 0.00 0.00 2.90
1888 2023 2.102420 TGACAAAGTGACACGGAGATGT 59.898 45.455 0.00 2.58 34.78 3.06
1889 2024 3.131396 GACAAAGTGACACGGAGATGTT 58.869 45.455 0.00 0.00 31.24 2.71
1890 2025 3.131396 ACAAAGTGACACGGAGATGTTC 58.869 45.455 0.00 0.00 31.24 3.18
1891 2026 3.181465 ACAAAGTGACACGGAGATGTTCT 60.181 43.478 0.00 0.00 31.24 3.01
1892 2027 3.753294 AAGTGACACGGAGATGTTCTT 57.247 42.857 0.00 0.00 31.24 2.52
1893 2028 4.866508 AAGTGACACGGAGATGTTCTTA 57.133 40.909 0.00 0.00 31.24 2.10
1894 2029 4.866508 AGTGACACGGAGATGTTCTTAA 57.133 40.909 0.00 0.00 31.24 1.85
1895 2030 5.209818 AGTGACACGGAGATGTTCTTAAA 57.790 39.130 0.00 0.00 31.24 1.52
1896 2031 5.794894 AGTGACACGGAGATGTTCTTAAAT 58.205 37.500 0.00 0.00 31.24 1.40
1897 2032 6.231211 AGTGACACGGAGATGTTCTTAAATT 58.769 36.000 0.00 0.00 31.24 1.82
1898 2033 7.383687 AGTGACACGGAGATGTTCTTAAATTA 58.616 34.615 0.00 0.00 31.24 1.40
1899 2034 7.545965 AGTGACACGGAGATGTTCTTAAATTAG 59.454 37.037 0.00 0.00 31.24 1.73
1900 2035 6.816640 TGACACGGAGATGTTCTTAAATTAGG 59.183 38.462 0.00 0.00 31.24 2.69
1901 2036 6.708285 ACACGGAGATGTTCTTAAATTAGGT 58.292 36.000 0.00 0.00 0.00 3.08
1902 2037 7.166167 ACACGGAGATGTTCTTAAATTAGGTT 58.834 34.615 0.00 0.00 0.00 3.50
1903 2038 7.333672 ACACGGAGATGTTCTTAAATTAGGTTC 59.666 37.037 0.00 0.00 0.00 3.62
1904 2039 7.333423 CACGGAGATGTTCTTAAATTAGGTTCA 59.667 37.037 0.00 0.00 0.00 3.18
1905 2040 7.881232 ACGGAGATGTTCTTAAATTAGGTTCAA 59.119 33.333 0.00 0.00 0.00 2.69
1906 2041 8.175716 CGGAGATGTTCTTAAATTAGGTTCAAC 58.824 37.037 0.00 0.00 0.00 3.18
1907 2042 9.232473 GGAGATGTTCTTAAATTAGGTTCAACT 57.768 33.333 0.00 0.00 0.00 3.16
1909 2044 8.515414 AGATGTTCTTAAATTAGGTTCAACTGC 58.485 33.333 0.00 0.00 0.00 4.40
1910 2045 6.977213 TGTTCTTAAATTAGGTTCAACTGCC 58.023 36.000 0.00 0.00 0.00 4.85
1911 2046 6.775629 TGTTCTTAAATTAGGTTCAACTGCCT 59.224 34.615 0.00 0.00 38.81 4.75
1912 2047 7.040686 TGTTCTTAAATTAGGTTCAACTGCCTC 60.041 37.037 0.00 0.00 36.38 4.70
1913 2048 5.642063 TCTTAAATTAGGTTCAACTGCCTCG 59.358 40.000 0.00 0.00 36.38 4.63
1914 2049 3.695830 AATTAGGTTCAACTGCCTCGA 57.304 42.857 0.00 0.00 36.38 4.04
1915 2050 2.743636 TTAGGTTCAACTGCCTCGAG 57.256 50.000 5.13 5.13 36.38 4.04
1916 2051 0.895530 TAGGTTCAACTGCCTCGAGG 59.104 55.000 27.83 27.83 36.38 4.63
1917 2052 1.376037 GGTTCAACTGCCTCGAGGG 60.376 63.158 32.06 19.04 35.18 4.30
1918 2053 1.671742 GTTCAACTGCCTCGAGGGA 59.328 57.895 32.06 28.79 37.23 4.20
1923 2058 4.504916 CTGCCTCGAGGGAGCACG 62.505 72.222 35.93 17.11 46.55 5.34
1925 2060 4.500116 GCCTCGAGGGAGCACGTC 62.500 72.222 32.06 9.62 39.06 4.34
1926 2061 3.827898 CCTCGAGGGAGCACGTCC 61.828 72.222 24.62 0.00 46.10 4.79
1927 2062 2.752238 CTCGAGGGAGCACGTCCT 60.752 66.667 3.91 0.00 46.06 3.85
1928 2063 1.451567 CTCGAGGGAGCACGTCCTA 60.452 63.158 3.91 0.00 46.06 2.94
1929 2064 0.820074 CTCGAGGGAGCACGTCCTAT 60.820 60.000 3.91 0.00 46.06 2.57
1930 2065 1.101635 TCGAGGGAGCACGTCCTATG 61.102 60.000 0.00 0.00 46.06 2.23
1931 2066 1.384989 CGAGGGAGCACGTCCTATGT 61.385 60.000 0.00 0.00 46.06 2.29
1932 2067 0.386113 GAGGGAGCACGTCCTATGTC 59.614 60.000 0.00 0.00 46.06 3.06
1933 2068 1.043673 AGGGAGCACGTCCTATGTCC 61.044 60.000 0.00 0.00 46.06 4.02
1934 2069 1.043673 GGGAGCACGTCCTATGTCCT 61.044 60.000 0.00 0.00 46.06 3.85
1935 2070 1.688772 GGAGCACGTCCTATGTCCTA 58.311 55.000 0.00 0.00 42.99 2.94
1936 2071 2.240279 GGAGCACGTCCTATGTCCTAT 58.760 52.381 0.00 0.00 42.99 2.57
1937 2072 2.029828 GGAGCACGTCCTATGTCCTATG 60.030 54.545 0.00 0.00 42.99 2.23
1938 2073 1.964223 AGCACGTCCTATGTCCTATGG 59.036 52.381 0.00 0.00 0.00 2.74
1939 2074 1.000955 GCACGTCCTATGTCCTATGGG 59.999 57.143 0.00 0.00 0.00 4.00
1940 2075 2.594131 CACGTCCTATGTCCTATGGGA 58.406 52.381 0.00 0.00 39.70 4.37
1941 2076 2.558795 CACGTCCTATGTCCTATGGGAG 59.441 54.545 0.00 0.00 43.12 4.30
1943 2078 2.541466 GTCCTATGTCCTATGGGAGGG 58.459 57.143 0.00 0.00 46.70 4.30
1944 2079 2.158143 GTCCTATGTCCTATGGGAGGGT 60.158 54.545 0.00 0.00 46.70 4.34
1945 2080 2.111972 TCCTATGTCCTATGGGAGGGTC 59.888 54.545 0.00 0.00 46.70 4.46
1946 2081 2.171840 CTATGTCCTATGGGAGGGTCG 58.828 57.143 0.00 0.00 46.70 4.79
1947 2082 0.264955 ATGTCCTATGGGAGGGTCGT 59.735 55.000 0.00 0.00 46.70 4.34
1948 2083 0.042131 TGTCCTATGGGAGGGTCGTT 59.958 55.000 0.00 0.00 46.70 3.85
1949 2084 0.464452 GTCCTATGGGAGGGTCGTTG 59.536 60.000 0.00 0.00 46.70 4.10
1950 2085 0.337082 TCCTATGGGAGGGTCGTTGA 59.663 55.000 0.00 0.00 46.70 3.18
1951 2086 0.753262 CCTATGGGAGGGTCGTTGAG 59.247 60.000 0.00 0.00 42.39 3.02
1952 2087 1.688311 CCTATGGGAGGGTCGTTGAGA 60.688 57.143 0.00 0.00 42.39 3.27
1953 2088 1.683917 CTATGGGAGGGTCGTTGAGAG 59.316 57.143 0.00 0.00 0.00 3.20
1954 2089 0.252284 ATGGGAGGGTCGTTGAGAGT 60.252 55.000 0.00 0.00 0.00 3.24
1955 2090 0.406750 TGGGAGGGTCGTTGAGAGTA 59.593 55.000 0.00 0.00 0.00 2.59
1956 2091 1.104630 GGGAGGGTCGTTGAGAGTAG 58.895 60.000 0.00 0.00 0.00 2.57
1957 2092 1.616456 GGGAGGGTCGTTGAGAGTAGT 60.616 57.143 0.00 0.00 0.00 2.73
1958 2093 1.473278 GGAGGGTCGTTGAGAGTAGTG 59.527 57.143 0.00 0.00 0.00 2.74
1959 2094 0.889306 AGGGTCGTTGAGAGTAGTGC 59.111 55.000 0.00 0.00 0.00 4.40
1960 2095 0.108756 GGGTCGTTGAGAGTAGTGCC 60.109 60.000 0.00 0.00 0.00 5.01
1961 2096 0.108756 GGTCGTTGAGAGTAGTGCCC 60.109 60.000 0.00 0.00 0.00 5.36
1962 2097 0.456312 GTCGTTGAGAGTAGTGCCCG 60.456 60.000 0.00 0.00 0.00 6.13
1963 2098 1.153823 CGTTGAGAGTAGTGCCCGG 60.154 63.158 0.00 0.00 0.00 5.73
1964 2099 1.218316 GTTGAGAGTAGTGCCCGGG 59.782 63.158 19.09 19.09 0.00 5.73
1965 2100 1.987855 TTGAGAGTAGTGCCCGGGG 60.988 63.158 25.28 9.31 0.00 5.73
1993 2128 2.966050 CACTACAAGTGCTTCCTCCTC 58.034 52.381 0.00 0.00 39.62 3.71
1994 2129 2.300152 CACTACAAGTGCTTCCTCCTCA 59.700 50.000 0.00 0.00 39.62 3.86
1995 2130 2.300437 ACTACAAGTGCTTCCTCCTCAC 59.700 50.000 0.00 0.00 0.00 3.51
1996 2131 0.034059 ACAAGTGCTTCCTCCTCACG 59.966 55.000 0.00 0.00 35.97 4.35
1997 2132 0.671781 CAAGTGCTTCCTCCTCACGG 60.672 60.000 0.00 0.00 35.97 4.94
1998 2133 1.831652 AAGTGCTTCCTCCTCACGGG 61.832 60.000 0.00 0.00 35.97 5.28
1999 2134 2.203788 TGCTTCCTCCTCACGGGT 60.204 61.111 0.00 0.00 36.25 5.28
2000 2135 1.841556 TGCTTCCTCCTCACGGGTT 60.842 57.895 0.00 0.00 36.25 4.11
2001 2136 1.376037 GCTTCCTCCTCACGGGTTG 60.376 63.158 0.00 0.00 36.25 3.77
2002 2137 1.376037 CTTCCTCCTCACGGGTTGC 60.376 63.158 0.00 0.00 36.25 4.17
2003 2138 2.804828 CTTCCTCCTCACGGGTTGCC 62.805 65.000 0.00 0.00 36.25 4.52
2004 2139 3.636231 CCTCCTCACGGGTTGCCA 61.636 66.667 0.00 0.00 36.25 4.92
2005 2140 2.358737 CTCCTCACGGGTTGCCAC 60.359 66.667 0.00 0.00 36.25 5.01
2006 2141 2.847234 TCCTCACGGGTTGCCACT 60.847 61.111 0.00 0.00 36.25 4.00
2007 2142 2.669569 CCTCACGGGTTGCCACTG 60.670 66.667 0.00 0.00 0.00 3.66
2008 2143 3.357079 CTCACGGGTTGCCACTGC 61.357 66.667 0.00 0.00 38.26 4.40
2017 2152 3.487211 TGCCACTGCACAGGATCT 58.513 55.556 3.88 0.00 44.23 2.75
2018 2153 1.297689 TGCCACTGCACAGGATCTC 59.702 57.895 3.88 0.00 44.23 2.75
2019 2154 1.297689 GCCACTGCACAGGATCTCA 59.702 57.895 3.88 0.00 37.47 3.27
2020 2155 1.023513 GCCACTGCACAGGATCTCAC 61.024 60.000 3.88 0.00 37.47 3.51
2021 2156 0.392193 CCACTGCACAGGATCTCACC 60.392 60.000 2.21 0.00 0.00 4.02
2022 2157 0.392193 CACTGCACAGGATCTCACCC 60.392 60.000 2.21 0.00 0.00 4.61
2023 2158 1.153489 CTGCACAGGATCTCACCCG 60.153 63.158 0.00 0.00 0.00 5.28
2024 2159 2.187946 GCACAGGATCTCACCCGG 59.812 66.667 0.00 0.00 0.00 5.73
2025 2160 2.660064 GCACAGGATCTCACCCGGT 61.660 63.158 0.00 0.00 32.34 5.28
2026 2161 1.983224 CACAGGATCTCACCCGGTT 59.017 57.895 0.00 0.00 29.70 4.44
2027 2162 0.324943 CACAGGATCTCACCCGGTTT 59.675 55.000 0.00 0.00 29.70 3.27
2028 2163 0.324943 ACAGGATCTCACCCGGTTTG 59.675 55.000 0.00 0.00 0.00 2.93
2029 2164 1.026718 CAGGATCTCACCCGGTTTGC 61.027 60.000 0.00 0.00 0.00 3.68
2030 2165 1.201429 AGGATCTCACCCGGTTTGCT 61.201 55.000 0.00 0.00 0.00 3.91
2031 2166 0.744771 GGATCTCACCCGGTTTGCTC 60.745 60.000 0.00 0.00 0.00 4.26
2032 2167 0.036388 GATCTCACCCGGTTTGCTCA 60.036 55.000 0.00 0.00 0.00 4.26
2033 2168 0.620556 ATCTCACCCGGTTTGCTCAT 59.379 50.000 0.00 0.00 0.00 2.90
2034 2169 1.271856 TCTCACCCGGTTTGCTCATA 58.728 50.000 0.00 0.00 0.00 2.15
2035 2170 1.066430 TCTCACCCGGTTTGCTCATAC 60.066 52.381 0.00 0.00 0.00 2.39
2036 2171 0.981183 TCACCCGGTTTGCTCATACT 59.019 50.000 0.00 0.00 0.00 2.12
2037 2172 1.086696 CACCCGGTTTGCTCATACTG 58.913 55.000 0.00 0.00 0.00 2.74
2038 2173 0.690762 ACCCGGTTTGCTCATACTGT 59.309 50.000 0.00 0.00 0.00 3.55
2039 2174 1.073284 ACCCGGTTTGCTCATACTGTT 59.927 47.619 0.00 0.00 0.00 3.16
2040 2175 1.468520 CCCGGTTTGCTCATACTGTTG 59.531 52.381 0.00 0.00 0.00 3.33
2041 2176 1.135689 CCGGTTTGCTCATACTGTTGC 60.136 52.381 0.00 0.00 0.00 4.17
2042 2177 1.806542 CGGTTTGCTCATACTGTTGCT 59.193 47.619 0.00 0.00 0.00 3.91
2043 2178 2.226437 CGGTTTGCTCATACTGTTGCTT 59.774 45.455 0.00 0.00 0.00 3.91
2044 2179 3.667960 CGGTTTGCTCATACTGTTGCTTC 60.668 47.826 0.00 0.00 0.00 3.86
2045 2180 3.503748 GGTTTGCTCATACTGTTGCTTCT 59.496 43.478 0.00 0.00 0.00 2.85
2046 2181 4.022849 GGTTTGCTCATACTGTTGCTTCTT 60.023 41.667 0.00 0.00 0.00 2.52
2047 2182 5.507985 GGTTTGCTCATACTGTTGCTTCTTT 60.508 40.000 0.00 0.00 0.00 2.52
2048 2183 5.772825 TTGCTCATACTGTTGCTTCTTTT 57.227 34.783 0.00 0.00 0.00 2.27
2049 2184 5.362556 TGCTCATACTGTTGCTTCTTTTC 57.637 39.130 0.00 0.00 0.00 2.29
2050 2185 4.821260 TGCTCATACTGTTGCTTCTTTTCA 59.179 37.500 0.00 0.00 0.00 2.69
2051 2186 5.474532 TGCTCATACTGTTGCTTCTTTTCAT 59.525 36.000 0.00 0.00 0.00 2.57
2052 2187 6.026513 GCTCATACTGTTGCTTCTTTTCATC 58.973 40.000 0.00 0.00 0.00 2.92
2053 2188 6.348786 GCTCATACTGTTGCTTCTTTTCATCA 60.349 38.462 0.00 0.00 0.00 3.07
2054 2189 7.627939 GCTCATACTGTTGCTTCTTTTCATCAT 60.628 37.037 0.00 0.00 0.00 2.45
2055 2190 7.755591 TCATACTGTTGCTTCTTTTCATCATC 58.244 34.615 0.00 0.00 0.00 2.92
2056 2191 7.391275 TCATACTGTTGCTTCTTTTCATCATCA 59.609 33.333 0.00 0.00 0.00 3.07
2057 2192 6.395426 ACTGTTGCTTCTTTTCATCATCAA 57.605 33.333 0.00 0.00 0.00 2.57
2058 2193 6.989659 ACTGTTGCTTCTTTTCATCATCAAT 58.010 32.000 0.00 0.00 0.00 2.57
2059 2194 8.114331 ACTGTTGCTTCTTTTCATCATCAATA 57.886 30.769 0.00 0.00 0.00 1.90
2060 2195 8.579006 ACTGTTGCTTCTTTTCATCATCAATAA 58.421 29.630 0.00 0.00 0.00 1.40
2061 2196 8.975410 TGTTGCTTCTTTTCATCATCAATAAG 57.025 30.769 0.00 0.00 0.00 1.73
2062 2197 8.795513 TGTTGCTTCTTTTCATCATCAATAAGA 58.204 29.630 0.00 0.00 0.00 2.10
2063 2198 9.630098 GTTGCTTCTTTTCATCATCAATAAGAA 57.370 29.630 0.00 0.00 32.52 2.52
2064 2199 9.850628 TTGCTTCTTTTCATCATCAATAAGAAG 57.149 29.630 14.73 14.73 45.58 2.85
2065 2200 8.464404 TGCTTCTTTTCATCATCAATAAGAAGG 58.536 33.333 18.54 6.21 44.18 3.46
2066 2201 8.680903 GCTTCTTTTCATCATCAATAAGAAGGA 58.319 33.333 18.54 0.00 44.18 3.36
2077 2212 9.412460 TCATCAATAAGAAGGATAAAACATGCT 57.588 29.630 0.00 0.00 0.00 3.79
2078 2213 9.674824 CATCAATAAGAAGGATAAAACATGCTC 57.325 33.333 0.00 0.00 0.00 4.26
2079 2214 9.638176 ATCAATAAGAAGGATAAAACATGCTCT 57.362 29.630 0.00 0.00 0.00 4.09
2080 2215 9.466497 TCAATAAGAAGGATAAAACATGCTCTT 57.534 29.630 0.00 0.00 0.00 2.85
2083 2218 6.428385 AGAAGGATAAAACATGCTCTTTCG 57.572 37.500 0.00 0.00 31.29 3.46
2084 2219 5.940470 AGAAGGATAAAACATGCTCTTTCGT 59.060 36.000 0.00 0.00 31.29 3.85
2085 2220 5.551760 AGGATAAAACATGCTCTTTCGTG 57.448 39.130 0.00 0.00 0.00 4.35
2086 2221 4.396166 AGGATAAAACATGCTCTTTCGTGG 59.604 41.667 0.00 0.00 0.00 4.94
2087 2222 4.438744 GGATAAAACATGCTCTTTCGTGGG 60.439 45.833 0.00 0.00 0.00 4.61
2088 2223 1.981256 AAACATGCTCTTTCGTGGGT 58.019 45.000 0.00 0.00 0.00 4.51
2089 2224 1.981256 AACATGCTCTTTCGTGGGTT 58.019 45.000 0.00 0.00 0.00 4.11
2090 2225 1.523758 ACATGCTCTTTCGTGGGTTC 58.476 50.000 0.00 0.00 0.00 3.62
2091 2226 1.202758 ACATGCTCTTTCGTGGGTTCA 60.203 47.619 0.00 0.00 0.00 3.18
2092 2227 1.879380 CATGCTCTTTCGTGGGTTCAA 59.121 47.619 0.00 0.00 0.00 2.69
2093 2228 2.270352 TGCTCTTTCGTGGGTTCAAT 57.730 45.000 0.00 0.00 0.00 2.57
2094 2229 3.410631 TGCTCTTTCGTGGGTTCAATA 57.589 42.857 0.00 0.00 0.00 1.90
2095 2230 3.745799 TGCTCTTTCGTGGGTTCAATAA 58.254 40.909 0.00 0.00 0.00 1.40
2096 2231 3.500680 TGCTCTTTCGTGGGTTCAATAAC 59.499 43.478 0.00 0.00 34.66 1.89
2097 2232 3.751698 GCTCTTTCGTGGGTTCAATAACT 59.248 43.478 0.00 0.00 35.81 2.24
2098 2233 4.215613 GCTCTTTCGTGGGTTCAATAACTT 59.784 41.667 0.00 0.00 35.81 2.66
2099 2234 5.682943 TCTTTCGTGGGTTCAATAACTTG 57.317 39.130 0.00 0.00 35.81 3.16
2100 2235 5.127491 TCTTTCGTGGGTTCAATAACTTGT 58.873 37.500 0.00 0.00 35.81 3.16
2101 2236 5.591067 TCTTTCGTGGGTTCAATAACTTGTT 59.409 36.000 0.00 0.00 35.81 2.83
2102 2237 5.427036 TTCGTGGGTTCAATAACTTGTTC 57.573 39.130 0.00 0.00 35.81 3.18
2103 2238 4.452825 TCGTGGGTTCAATAACTTGTTCA 58.547 39.130 0.00 0.00 35.81 3.18
2104 2239 4.882427 TCGTGGGTTCAATAACTTGTTCAA 59.118 37.500 0.00 0.00 35.81 2.69
2105 2240 5.008217 TCGTGGGTTCAATAACTTGTTCAAG 59.992 40.000 10.50 10.50 35.81 3.02
2106 2241 5.008217 CGTGGGTTCAATAACTTGTTCAAGA 59.992 40.000 17.75 0.00 35.81 3.02
2107 2242 6.293955 CGTGGGTTCAATAACTTGTTCAAGAT 60.294 38.462 17.75 9.57 35.81 2.40
2108 2243 7.433680 GTGGGTTCAATAACTTGTTCAAGATT 58.566 34.615 17.75 10.95 35.81 2.40
2109 2244 7.926018 GTGGGTTCAATAACTTGTTCAAGATTT 59.074 33.333 17.75 6.60 35.81 2.17
2110 2245 7.925483 TGGGTTCAATAACTTGTTCAAGATTTG 59.075 33.333 17.75 15.57 35.81 2.32
2111 2246 7.095649 GGGTTCAATAACTTGTTCAAGATTTGC 60.096 37.037 17.75 7.35 35.81 3.68
2112 2247 7.437862 GGTTCAATAACTTGTTCAAGATTTGCA 59.562 33.333 17.75 7.13 35.81 4.08
2113 2248 8.816144 GTTCAATAACTTGTTCAAGATTTGCAA 58.184 29.630 17.75 0.00 33.87 4.08
2114 2249 8.578308 TCAATAACTTGTTCAAGATTTGCAAG 57.422 30.769 17.75 0.00 41.40 4.01
2116 2251 8.482429 CAATAACTTGTTCAAGATTTGCAAGTC 58.518 33.333 13.69 13.69 45.89 3.01
2117 2252 4.936891 ACTTGTTCAAGATTTGCAAGTCC 58.063 39.130 17.41 3.62 44.10 3.85
2118 2253 4.402155 ACTTGTTCAAGATTTGCAAGTCCA 59.598 37.500 17.41 6.10 44.10 4.02
2119 2254 4.998671 TGTTCAAGATTTGCAAGTCCAA 57.001 36.364 17.41 6.44 0.00 3.53
2120 2255 4.681744 TGTTCAAGATTTGCAAGTCCAAC 58.318 39.130 17.41 16.64 0.00 3.77
2121 2256 4.051237 GTTCAAGATTTGCAAGTCCAACC 58.949 43.478 17.41 0.31 0.00 3.77
2122 2257 3.295093 TCAAGATTTGCAAGTCCAACCA 58.705 40.909 17.41 0.00 0.00 3.67
2123 2258 3.318839 TCAAGATTTGCAAGTCCAACCAG 59.681 43.478 17.41 3.17 0.00 4.00
2124 2259 2.242043 AGATTTGCAAGTCCAACCAGG 58.758 47.619 17.41 0.00 39.47 4.45
2125 2260 0.681175 ATTTGCAAGTCCAACCAGGC 59.319 50.000 0.00 0.00 37.29 4.85
2126 2261 0.685785 TTTGCAAGTCCAACCAGGCA 60.686 50.000 0.00 0.00 37.29 4.75
2127 2262 1.391157 TTGCAAGTCCAACCAGGCAC 61.391 55.000 0.00 0.00 37.29 5.01
2128 2263 2.908073 GCAAGTCCAACCAGGCACG 61.908 63.158 0.00 0.00 37.29 5.34
2129 2264 1.525995 CAAGTCCAACCAGGCACGT 60.526 57.895 0.00 0.00 37.29 4.49
2130 2265 1.227853 AAGTCCAACCAGGCACGTC 60.228 57.895 0.00 0.00 37.29 4.34
2131 2266 1.978455 AAGTCCAACCAGGCACGTCA 61.978 55.000 0.00 0.00 37.29 4.35
2132 2267 2.110213 TCCAACCAGGCACGTCAC 59.890 61.111 0.00 0.00 37.29 3.67
2133 2268 2.203139 CCAACCAGGCACGTCACA 60.203 61.111 0.00 0.00 0.00 3.58
2134 2269 1.600636 CCAACCAGGCACGTCACAT 60.601 57.895 0.00 0.00 0.00 3.21
2135 2270 1.577328 CCAACCAGGCACGTCACATC 61.577 60.000 0.00 0.00 0.00 3.06
2136 2271 0.884259 CAACCAGGCACGTCACATCA 60.884 55.000 0.00 0.00 0.00 3.07
2137 2272 0.179032 AACCAGGCACGTCACATCAA 60.179 50.000 0.00 0.00 0.00 2.57
2138 2273 0.603707 ACCAGGCACGTCACATCAAG 60.604 55.000 0.00 0.00 0.00 3.02
2139 2274 1.300971 CCAGGCACGTCACATCAAGG 61.301 60.000 0.00 0.00 0.00 3.61
2140 2275 0.320683 CAGGCACGTCACATCAAGGA 60.321 55.000 0.00 0.00 0.00 3.36
2141 2276 0.615331 AGGCACGTCACATCAAGGAT 59.385 50.000 0.00 0.00 0.00 3.24
2142 2277 0.729116 GGCACGTCACATCAAGGATG 59.271 55.000 4.74 4.74 44.71 3.51
2143 2278 0.097674 GCACGTCACATCAAGGATGC 59.902 55.000 6.15 0.00 43.15 3.91
2144 2279 1.441738 CACGTCACATCAAGGATGCA 58.558 50.000 6.15 0.00 43.15 3.96
2145 2280 1.805943 CACGTCACATCAAGGATGCAA 59.194 47.619 6.15 0.00 43.15 4.08
2146 2281 2.226200 CACGTCACATCAAGGATGCAAA 59.774 45.455 6.15 0.00 43.15 3.68
2147 2282 2.226437 ACGTCACATCAAGGATGCAAAC 59.774 45.455 6.15 2.18 43.15 2.93
2148 2283 2.485426 CGTCACATCAAGGATGCAAACT 59.515 45.455 6.15 0.00 43.15 2.66
2149 2284 3.668757 CGTCACATCAAGGATGCAAACTG 60.669 47.826 6.15 0.00 43.15 3.16
2150 2285 2.821378 TCACATCAAGGATGCAAACTGG 59.179 45.455 6.15 0.00 43.15 4.00
2151 2286 2.821378 CACATCAAGGATGCAAACTGGA 59.179 45.455 6.15 0.00 43.15 3.86
2152 2287 3.087031 ACATCAAGGATGCAAACTGGAG 58.913 45.455 6.15 0.00 43.15 3.86
2153 2288 1.538047 TCAAGGATGCAAACTGGAGC 58.462 50.000 0.00 0.00 0.00 4.70
2154 2289 1.202915 TCAAGGATGCAAACTGGAGCA 60.203 47.619 0.00 0.00 45.92 4.26
2155 2290 1.614903 CAAGGATGCAAACTGGAGCAA 59.385 47.619 0.00 0.00 44.88 3.91
2156 2291 1.542492 AGGATGCAAACTGGAGCAAG 58.458 50.000 0.00 0.00 44.88 4.01
2157 2292 1.074405 AGGATGCAAACTGGAGCAAGA 59.926 47.619 0.00 0.00 44.88 3.02
2158 2293 1.888512 GGATGCAAACTGGAGCAAGAA 59.111 47.619 0.00 0.00 44.88 2.52
2159 2294 2.094854 GGATGCAAACTGGAGCAAGAAG 60.095 50.000 0.00 0.00 44.88 2.85
2160 2295 2.057137 TGCAAACTGGAGCAAGAAGT 57.943 45.000 0.00 0.00 37.90 3.01
2161 2296 2.378038 TGCAAACTGGAGCAAGAAGTT 58.622 42.857 0.00 0.00 37.90 2.66
2162 2297 2.099592 TGCAAACTGGAGCAAGAAGTTG 59.900 45.455 0.00 0.00 37.90 3.16
2172 2307 1.506493 CAAGAAGTTGCGCTGAGAGT 58.494 50.000 9.73 0.00 0.00 3.24
2173 2308 2.677199 CAAGAAGTTGCGCTGAGAGTA 58.323 47.619 9.73 0.00 0.00 2.59
2174 2309 2.645730 AGAAGTTGCGCTGAGAGTAG 57.354 50.000 9.73 0.00 0.00 2.57
2175 2310 2.163509 AGAAGTTGCGCTGAGAGTAGA 58.836 47.619 9.73 0.00 0.00 2.59
2176 2311 2.558795 AGAAGTTGCGCTGAGAGTAGAA 59.441 45.455 9.73 0.00 0.00 2.10
2177 2312 3.194542 AGAAGTTGCGCTGAGAGTAGAAT 59.805 43.478 9.73 0.00 0.00 2.40
2178 2313 2.886081 AGTTGCGCTGAGAGTAGAATG 58.114 47.619 9.73 0.00 0.00 2.67
2179 2314 1.325943 GTTGCGCTGAGAGTAGAATGC 59.674 52.381 9.73 0.00 0.00 3.56
2180 2315 0.532115 TGCGCTGAGAGTAGAATGCA 59.468 50.000 9.73 0.00 0.00 3.96
2181 2316 1.066929 TGCGCTGAGAGTAGAATGCAA 60.067 47.619 9.73 0.00 0.00 4.08
2182 2317 1.325943 GCGCTGAGAGTAGAATGCAAC 59.674 52.381 0.00 0.00 0.00 4.17
2183 2318 1.585668 CGCTGAGAGTAGAATGCAACG 59.414 52.381 0.00 0.00 0.00 4.10
2184 2319 2.732282 CGCTGAGAGTAGAATGCAACGA 60.732 50.000 0.00 0.00 0.00 3.85
2185 2320 3.254060 GCTGAGAGTAGAATGCAACGAA 58.746 45.455 0.00 0.00 0.00 3.85
2186 2321 3.679980 GCTGAGAGTAGAATGCAACGAAA 59.320 43.478 0.00 0.00 0.00 3.46
2187 2322 4.201666 GCTGAGAGTAGAATGCAACGAAAG 60.202 45.833 0.00 0.00 0.00 2.62
2188 2323 3.679980 TGAGAGTAGAATGCAACGAAAGC 59.320 43.478 0.00 0.00 0.00 3.51
2189 2324 3.003480 AGAGTAGAATGCAACGAAAGCC 58.997 45.455 0.00 0.00 0.00 4.35
2190 2325 3.003480 GAGTAGAATGCAACGAAAGCCT 58.997 45.455 0.00 0.00 0.00 4.58
2191 2326 2.744202 AGTAGAATGCAACGAAAGCCTG 59.256 45.455 0.00 0.00 0.00 4.85
2192 2327 1.896220 AGAATGCAACGAAAGCCTGA 58.104 45.000 0.00 0.00 0.00 3.86
2193 2328 2.229792 AGAATGCAACGAAAGCCTGAA 58.770 42.857 0.00 0.00 0.00 3.02
2194 2329 2.030805 AGAATGCAACGAAAGCCTGAAC 60.031 45.455 0.00 0.00 0.00 3.18
2195 2330 1.609208 ATGCAACGAAAGCCTGAACT 58.391 45.000 0.00 0.00 0.00 3.01
2196 2331 0.944386 TGCAACGAAAGCCTGAACTC 59.056 50.000 0.00 0.00 0.00 3.01
2197 2332 1.230324 GCAACGAAAGCCTGAACTCT 58.770 50.000 0.00 0.00 0.00 3.24
2198 2333 2.224185 TGCAACGAAAGCCTGAACTCTA 60.224 45.455 0.00 0.00 0.00 2.43
2199 2334 2.413453 GCAACGAAAGCCTGAACTCTAG 59.587 50.000 0.00 0.00 0.00 2.43
2200 2335 3.861131 GCAACGAAAGCCTGAACTCTAGA 60.861 47.826 0.00 0.00 0.00 2.43
2201 2336 3.859411 ACGAAAGCCTGAACTCTAGAG 57.141 47.619 18.49 18.49 0.00 2.43
2202 2337 3.422796 ACGAAAGCCTGAACTCTAGAGA 58.577 45.455 26.57 2.97 0.00 3.10
2204 2339 3.733684 CGAAAGCCTGAACTCTAGAGAGC 60.734 52.174 26.57 18.00 45.79 4.09
2205 2340 1.775385 AGCCTGAACTCTAGAGAGCC 58.225 55.000 26.57 13.89 45.79 4.70
2206 2341 1.287739 AGCCTGAACTCTAGAGAGCCT 59.712 52.381 26.57 5.70 45.79 4.58
2207 2342 2.512056 AGCCTGAACTCTAGAGAGCCTA 59.488 50.000 26.57 6.74 45.79 3.93
2208 2343 2.884639 GCCTGAACTCTAGAGAGCCTAG 59.115 54.545 26.57 14.73 45.79 3.02
2209 2344 2.884639 CCTGAACTCTAGAGAGCCTAGC 59.115 54.545 26.57 7.35 45.79 3.42
2210 2345 2.884639 CTGAACTCTAGAGAGCCTAGCC 59.115 54.545 26.57 6.22 45.79 3.93
2211 2346 2.242452 TGAACTCTAGAGAGCCTAGCCA 59.758 50.000 26.57 8.46 45.79 4.75
2212 2347 2.358322 ACTCTAGAGAGCCTAGCCAC 57.642 55.000 26.57 0.00 45.79 5.01
2213 2348 1.133606 ACTCTAGAGAGCCTAGCCACC 60.134 57.143 26.57 0.00 45.79 4.61
2214 2349 1.144913 CTCTAGAGAGCCTAGCCACCT 59.855 57.143 15.05 0.00 43.60 4.00
2215 2350 1.133637 TCTAGAGAGCCTAGCCACCTG 60.134 57.143 0.00 0.00 43.60 4.00
2216 2351 0.105964 TAGAGAGCCTAGCCACCTGG 60.106 60.000 0.00 0.00 38.53 4.45
2217 2352 1.381872 GAGAGCCTAGCCACCTGGA 60.382 63.158 0.00 0.00 37.39 3.86
2218 2353 1.681486 GAGAGCCTAGCCACCTGGAC 61.681 65.000 0.00 0.00 37.39 4.02
2219 2354 3.077556 AGCCTAGCCACCTGGACG 61.078 66.667 0.00 0.00 37.39 4.79
2220 2355 3.391382 GCCTAGCCACCTGGACGT 61.391 66.667 0.00 0.00 37.39 4.34
2221 2356 2.579201 CCTAGCCACCTGGACGTG 59.421 66.667 0.00 0.00 37.39 4.49
2222 2357 1.982395 CCTAGCCACCTGGACGTGA 60.982 63.158 0.00 0.00 35.68 4.35
2223 2358 1.513158 CTAGCCACCTGGACGTGAG 59.487 63.158 0.00 0.00 35.68 3.51
2224 2359 1.949847 CTAGCCACCTGGACGTGAGG 61.950 65.000 0.00 8.42 35.68 3.86
2225 2360 2.435120 TAGCCACCTGGACGTGAGGA 62.435 60.000 15.65 0.00 35.68 3.71
2226 2361 2.660064 GCCACCTGGACGTGAGGAT 61.660 63.158 15.65 0.00 35.68 3.24
2227 2362 1.219124 CCACCTGGACGTGAGGATG 59.781 63.158 15.65 10.14 35.68 3.51
2228 2363 1.544825 CCACCTGGACGTGAGGATGT 61.545 60.000 15.65 0.00 35.68 3.06
2229 2364 0.321671 CACCTGGACGTGAGGATGTT 59.678 55.000 15.65 0.00 35.68 2.71
2230 2365 0.321671 ACCTGGACGTGAGGATGTTG 59.678 55.000 15.65 0.00 34.37 3.33
2231 2366 0.608130 CCTGGACGTGAGGATGTTGA 59.392 55.000 4.44 0.00 31.48 3.18
2232 2367 1.673033 CCTGGACGTGAGGATGTTGAC 60.673 57.143 4.44 0.00 31.48 3.18
2233 2368 1.000843 CTGGACGTGAGGATGTTGACA 59.999 52.381 0.00 0.00 0.00 3.58
2234 2369 1.414550 TGGACGTGAGGATGTTGACAA 59.585 47.619 0.00 0.00 0.00 3.18
2235 2370 2.038426 TGGACGTGAGGATGTTGACAAT 59.962 45.455 0.00 0.00 0.00 2.71
2236 2371 2.416547 GGACGTGAGGATGTTGACAATG 59.583 50.000 0.00 0.00 0.00 2.82
2237 2372 3.067106 GACGTGAGGATGTTGACAATGT 58.933 45.455 0.00 0.00 0.00 2.71
2238 2373 3.476552 ACGTGAGGATGTTGACAATGTT 58.523 40.909 0.00 0.00 0.00 2.71
2239 2374 3.250762 ACGTGAGGATGTTGACAATGTTG 59.749 43.478 0.00 0.00 0.00 3.33
2240 2375 3.250762 CGTGAGGATGTTGACAATGTTGT 59.749 43.478 0.00 0.00 45.65 3.32
2251 2386 3.746045 ACAATGTTGTCACGGACTACT 57.254 42.857 15.31 3.95 38.64 2.57
2252 2387 3.650139 ACAATGTTGTCACGGACTACTC 58.350 45.455 15.31 2.86 38.64 2.59
2253 2388 2.993899 CAATGTTGTCACGGACTACTCC 59.006 50.000 15.31 0.00 38.64 3.85
2254 2389 1.694844 TGTTGTCACGGACTACTCCA 58.305 50.000 15.31 0.00 38.64 3.86
2255 2390 2.033372 TGTTGTCACGGACTACTCCAA 58.967 47.619 15.31 0.00 38.64 3.53
2256 2391 2.223876 TGTTGTCACGGACTACTCCAAC 60.224 50.000 15.31 0.00 38.64 3.77
2257 2392 0.594602 TGTCACGGACTACTCCAACG 59.405 55.000 5.77 0.00 36.12 4.10
2258 2393 0.731855 GTCACGGACTACTCCAACGC 60.732 60.000 0.00 0.00 36.12 4.84
2259 2394 1.445582 CACGGACTACTCCAACGCC 60.446 63.158 0.00 0.00 36.12 5.68
2260 2395 1.605738 ACGGACTACTCCAACGCCT 60.606 57.895 0.00 0.00 36.12 5.52
2261 2396 0.322816 ACGGACTACTCCAACGCCTA 60.323 55.000 0.00 0.00 36.12 3.93
2262 2397 0.100146 CGGACTACTCCAACGCCTAC 59.900 60.000 0.00 0.00 36.12 3.18
2263 2398 0.459078 GGACTACTCCAACGCCTACC 59.541 60.000 0.00 0.00 36.42 3.18
2264 2399 1.472188 GACTACTCCAACGCCTACCT 58.528 55.000 0.00 0.00 0.00 3.08
2265 2400 1.823610 GACTACTCCAACGCCTACCTT 59.176 52.381 0.00 0.00 0.00 3.50
2266 2401 1.549170 ACTACTCCAACGCCTACCTTG 59.451 52.381 0.00 0.00 0.00 3.61
2267 2402 0.899720 TACTCCAACGCCTACCTTGG 59.100 55.000 0.00 0.00 38.70 3.61
2279 2414 4.993705 CCTACCTTGGCTATATCCCAAA 57.006 45.455 8.59 0.00 41.49 3.28
2280 2415 4.911390 CCTACCTTGGCTATATCCCAAAG 58.089 47.826 8.59 5.92 41.49 2.77
2281 2416 3.884037 ACCTTGGCTATATCCCAAAGG 57.116 47.619 9.23 9.23 41.49 3.11
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 33 1.002792 CCTTCCCCTGCTCTCTCCT 59.997 63.158 0.00 0.00 0.00 3.69
75 79 6.666113 TCTCCATATCCGTATAATAAGCACCA 59.334 38.462 0.00 0.00 0.00 4.17
371 379 3.603158 ATTAATTTTCACAACCGGGGC 57.397 42.857 6.32 0.00 0.00 5.80
386 394 3.372822 CACGTTCACGGGCTGTTATTAAT 59.627 43.478 0.00 0.00 44.95 1.40
391 425 4.347096 CACGTTCACGGGCTGTTA 57.653 55.556 0.00 0.00 44.95 2.41
399 433 2.938823 CTGGTTCCGCACGTTCACG 61.939 63.158 0.00 0.00 46.33 4.35
489 525 7.931578 TCATTTCATTTTAAGTACCGTCCAT 57.068 32.000 0.00 0.00 0.00 3.41
525 561 7.267128 CCCATTATCAACAACTGCAAACATAT 58.733 34.615 0.00 0.00 0.00 1.78
529 565 3.679502 GCCCATTATCAACAACTGCAAAC 59.320 43.478 0.00 0.00 0.00 2.93
735 775 5.596268 AACGTATTTTCCTTACCGTCAAC 57.404 39.130 0.00 0.00 0.00 3.18
851 891 1.544537 CGGTCCCCACAAGTGAATCAA 60.545 52.381 0.94 0.00 0.00 2.57
884 926 0.392998 CTTCCCATTGTGGTCTCGGG 60.393 60.000 0.00 0.00 35.17 5.14
931 973 8.689061 TGCTGTAAATGAATCATAGCAAATCTT 58.311 29.630 14.04 0.00 36.83 2.40
962 1004 0.955428 GCCAAATCTCACTGCCACGA 60.955 55.000 0.00 0.00 0.00 4.35
1039 1081 6.444633 CATCATTCAGAGCTTCAACAACTTT 58.555 36.000 0.00 0.00 0.00 2.66
1125 1211 6.147581 GCAATGAGCATAGGTTACATGATTG 58.852 40.000 0.00 0.00 44.79 2.67
1215 1301 1.352687 TCCGGTGTTGAATCCATCCAA 59.647 47.619 0.00 0.00 0.00 3.53
1238 1324 4.082787 CGTTTACAAGCATGGAAATCACCT 60.083 41.667 2.11 0.00 41.34 4.00
1329 1416 6.947733 TCCAATTCACTTTCCTTACATCATGT 59.052 34.615 0.00 0.00 0.00 3.21
1463 1558 4.325972 TCTAAAGTCAAGCATGTGCATCA 58.674 39.130 7.83 0.00 45.16 3.07
1645 1767 5.584253 ACACTGTACCATCATCAGACTAC 57.416 43.478 0.00 0.00 33.93 2.73
1647 1769 5.240891 CAAACACTGTACCATCATCAGACT 58.759 41.667 0.00 0.00 33.93 3.24
1648 1770 4.142816 GCAAACACTGTACCATCATCAGAC 60.143 45.833 0.00 0.00 33.93 3.51
1649 1771 4.002982 GCAAACACTGTACCATCATCAGA 58.997 43.478 0.00 0.00 33.93 3.27
1650 1772 3.127548 GGCAAACACTGTACCATCATCAG 59.872 47.826 0.00 0.00 35.60 2.90
1651 1773 3.081061 GGCAAACACTGTACCATCATCA 58.919 45.455 0.00 0.00 0.00 3.07
1652 1774 3.347216 AGGCAAACACTGTACCATCATC 58.653 45.455 0.00 0.00 0.00 2.92
1653 1775 3.439857 AGGCAAACACTGTACCATCAT 57.560 42.857 0.00 0.00 0.00 2.45
1654 1776 2.949177 AGGCAAACACTGTACCATCA 57.051 45.000 0.00 0.00 0.00 3.07
1655 1777 2.678336 GCTAGGCAAACACTGTACCATC 59.322 50.000 0.00 0.00 0.00 3.51
1656 1778 2.039746 TGCTAGGCAAACACTGTACCAT 59.960 45.455 0.00 0.00 34.76 3.55
1657 1779 1.418264 TGCTAGGCAAACACTGTACCA 59.582 47.619 0.00 0.00 34.76 3.25
1658 1780 2.178912 TGCTAGGCAAACACTGTACC 57.821 50.000 0.00 0.00 34.76 3.34
1659 1781 3.074412 ACATGCTAGGCAAACACTGTAC 58.926 45.455 0.00 0.00 43.62 2.90
1660 1782 3.417069 ACATGCTAGGCAAACACTGTA 57.583 42.857 0.00 0.00 43.62 2.74
1661 1783 2.276732 ACATGCTAGGCAAACACTGT 57.723 45.000 0.00 0.00 43.62 3.55
1662 1784 4.764679 TTAACATGCTAGGCAAACACTG 57.235 40.909 0.00 0.00 43.62 3.66
1714 1849 4.778904 TGCACGCTTTCACATTAAACTAC 58.221 39.130 0.00 0.00 0.00 2.73
1788 1923 6.610425 ACACTACTAAGAATACCCCCTAGTTG 59.390 42.308 0.00 0.00 0.00 3.16
1818 1953 0.599558 TCGTACACGCCAAGCTTACT 59.400 50.000 0.00 0.00 39.60 2.24
1819 1954 0.712222 GTCGTACACGCCAAGCTTAC 59.288 55.000 0.00 0.00 39.60 2.34
1820 1955 0.730155 CGTCGTACACGCCAAGCTTA 60.730 55.000 0.00 0.00 42.87 3.09
1821 1956 2.019951 CGTCGTACACGCCAAGCTT 61.020 57.895 0.00 0.00 42.87 3.74
1822 1957 2.430244 CGTCGTACACGCCAAGCT 60.430 61.111 0.00 0.00 42.87 3.74
1839 1974 3.227147 CGACGATCATCGACATAAGGTC 58.773 50.000 15.60 0.00 45.13 3.85
1840 1975 2.617308 ACGACGATCATCGACATAAGGT 59.383 45.455 19.21 0.00 45.13 3.50
1841 1976 3.269486 ACGACGATCATCGACATAAGG 57.731 47.619 19.21 0.00 45.13 2.69
1842 1977 4.607646 GTGTACGACGATCATCGACATAAG 59.392 45.833 19.21 0.00 45.13 1.73
1843 1978 4.271776 AGTGTACGACGATCATCGACATAA 59.728 41.667 19.21 0.00 45.13 1.90
1844 1979 3.805971 AGTGTACGACGATCATCGACATA 59.194 43.478 19.21 0.00 45.13 2.29
1845 1980 2.612672 AGTGTACGACGATCATCGACAT 59.387 45.455 19.21 0.00 45.13 3.06
1846 1981 2.004733 AGTGTACGACGATCATCGACA 58.995 47.619 19.21 14.16 45.13 4.35
1847 1982 2.733820 AGTGTACGACGATCATCGAC 57.266 50.000 19.21 11.79 45.13 4.20
1848 1983 2.674357 TCAAGTGTACGACGATCATCGA 59.326 45.455 19.21 0.00 45.13 3.59
1850 1985 3.754955 TGTCAAGTGTACGACGATCATC 58.245 45.455 0.00 0.00 34.78 2.92
1851 1986 3.842732 TGTCAAGTGTACGACGATCAT 57.157 42.857 0.00 0.00 34.78 2.45
1852 1987 3.629438 TTGTCAAGTGTACGACGATCA 57.371 42.857 0.00 0.00 34.78 2.92
1853 1988 3.979495 ACTTTGTCAAGTGTACGACGATC 59.021 43.478 0.00 0.00 42.05 3.69
1854 1989 3.973657 ACTTTGTCAAGTGTACGACGAT 58.026 40.909 0.00 0.00 42.05 3.73
1855 1990 3.425577 ACTTTGTCAAGTGTACGACGA 57.574 42.857 0.00 0.00 42.05 4.20
1864 1999 2.167693 TCTCCGTGTCACTTTGTCAAGT 59.832 45.455 0.65 0.00 44.72 3.16
1865 2000 2.821546 TCTCCGTGTCACTTTGTCAAG 58.178 47.619 0.65 0.00 35.92 3.02
1866 2001 2.971660 TCTCCGTGTCACTTTGTCAA 57.028 45.000 0.65 0.00 0.00 3.18
1867 2002 2.102420 ACATCTCCGTGTCACTTTGTCA 59.898 45.455 0.65 0.00 0.00 3.58
1868 2003 2.755650 ACATCTCCGTGTCACTTTGTC 58.244 47.619 0.65 0.00 0.00 3.18
1869 2004 2.910688 ACATCTCCGTGTCACTTTGT 57.089 45.000 0.65 0.00 0.00 2.83
1870 2005 3.393800 AGAACATCTCCGTGTCACTTTG 58.606 45.455 0.65 0.00 0.00 2.77
1871 2006 3.753294 AGAACATCTCCGTGTCACTTT 57.247 42.857 0.65 0.00 0.00 2.66
1872 2007 3.753294 AAGAACATCTCCGTGTCACTT 57.247 42.857 0.65 0.00 0.00 3.16
1873 2008 4.866508 TTAAGAACATCTCCGTGTCACT 57.133 40.909 0.65 0.00 0.00 3.41
1874 2009 6.481954 AATTTAAGAACATCTCCGTGTCAC 57.518 37.500 0.00 0.00 0.00 3.67
1875 2010 6.816640 CCTAATTTAAGAACATCTCCGTGTCA 59.183 38.462 0.00 0.00 0.00 3.58
1876 2011 6.817140 ACCTAATTTAAGAACATCTCCGTGTC 59.183 38.462 0.00 0.00 0.00 3.67
1877 2012 6.708285 ACCTAATTTAAGAACATCTCCGTGT 58.292 36.000 0.00 0.00 0.00 4.49
1878 2013 7.333423 TGAACCTAATTTAAGAACATCTCCGTG 59.667 37.037 0.00 0.00 0.00 4.94
1879 2014 7.391620 TGAACCTAATTTAAGAACATCTCCGT 58.608 34.615 0.00 0.00 0.00 4.69
1880 2015 7.843490 TGAACCTAATTTAAGAACATCTCCG 57.157 36.000 0.00 0.00 0.00 4.63
1881 2016 9.232473 AGTTGAACCTAATTTAAGAACATCTCC 57.768 33.333 0.00 0.00 0.00 3.71
1883 2018 8.515414 GCAGTTGAACCTAATTTAAGAACATCT 58.485 33.333 0.00 0.00 0.00 2.90
1884 2019 7.755373 GGCAGTTGAACCTAATTTAAGAACATC 59.245 37.037 0.00 0.00 0.00 3.06
1885 2020 7.451566 AGGCAGTTGAACCTAATTTAAGAACAT 59.548 33.333 0.00 0.00 33.38 2.71
1886 2021 6.775629 AGGCAGTTGAACCTAATTTAAGAACA 59.224 34.615 0.00 0.00 33.38 3.18
1887 2022 7.215719 AGGCAGTTGAACCTAATTTAAGAAC 57.784 36.000 0.00 0.00 33.38 3.01
1888 2023 6.148811 CGAGGCAGTTGAACCTAATTTAAGAA 59.851 38.462 0.00 0.00 36.05 2.52
1889 2024 5.642063 CGAGGCAGTTGAACCTAATTTAAGA 59.358 40.000 0.00 0.00 36.05 2.10
1890 2025 5.642063 TCGAGGCAGTTGAACCTAATTTAAG 59.358 40.000 0.00 0.00 36.05 1.85
1891 2026 5.553123 TCGAGGCAGTTGAACCTAATTTAA 58.447 37.500 0.00 0.00 36.05 1.52
1892 2027 5.155278 TCGAGGCAGTTGAACCTAATTTA 57.845 39.130 0.00 0.00 36.05 1.40
1893 2028 4.003648 CTCGAGGCAGTTGAACCTAATTT 58.996 43.478 3.91 0.00 36.05 1.82
1894 2029 3.600388 CTCGAGGCAGTTGAACCTAATT 58.400 45.455 3.91 0.00 36.05 1.40
1895 2030 2.093447 CCTCGAGGCAGTTGAACCTAAT 60.093 50.000 20.67 0.00 36.05 1.73
1896 2031 1.275291 CCTCGAGGCAGTTGAACCTAA 59.725 52.381 20.67 0.00 36.05 2.69
1897 2032 0.895530 CCTCGAGGCAGTTGAACCTA 59.104 55.000 20.67 0.00 36.05 3.08
1898 2033 1.674057 CCTCGAGGCAGTTGAACCT 59.326 57.895 20.67 0.00 39.65 3.50
1899 2034 1.376037 CCCTCGAGGCAGTTGAACC 60.376 63.158 26.87 0.00 0.00 3.62
1900 2035 0.390472 CTCCCTCGAGGCAGTTGAAC 60.390 60.000 26.87 0.00 34.51 3.18
1901 2036 1.975327 CTCCCTCGAGGCAGTTGAA 59.025 57.895 26.87 3.70 34.51 2.69
1902 2037 2.650116 GCTCCCTCGAGGCAGTTGA 61.650 63.158 26.87 15.90 36.55 3.18
1903 2038 2.125350 GCTCCCTCGAGGCAGTTG 60.125 66.667 26.87 12.17 36.55 3.16
1904 2039 2.604686 TGCTCCCTCGAGGCAGTT 60.605 61.111 26.87 0.00 36.55 3.16
1905 2040 3.386237 GTGCTCCCTCGAGGCAGT 61.386 66.667 26.87 0.00 36.55 4.40
1906 2041 4.504916 CGTGCTCCCTCGAGGCAG 62.505 72.222 26.87 22.84 36.55 4.85
1908 2043 4.500116 GACGTGCTCCCTCGAGGC 62.500 72.222 26.87 15.37 36.55 4.70
1909 2044 2.888464 TAGGACGTGCTCCCTCGAGG 62.888 65.000 25.36 25.36 40.53 4.63
1910 2045 0.820074 ATAGGACGTGCTCCCTCGAG 60.820 60.000 14.74 5.13 40.53 4.04
1911 2046 1.101635 CATAGGACGTGCTCCCTCGA 61.102 60.000 14.74 0.00 40.53 4.04
1912 2047 1.360551 CATAGGACGTGCTCCCTCG 59.639 63.158 14.74 0.00 40.53 4.63
1913 2048 0.386113 GACATAGGACGTGCTCCCTC 59.614 60.000 14.74 2.29 40.53 4.30
1914 2049 1.043673 GGACATAGGACGTGCTCCCT 61.044 60.000 14.74 5.70 40.53 4.20
1915 2050 1.043673 AGGACATAGGACGTGCTCCC 61.044 60.000 14.74 10.97 40.53 4.30
1916 2051 1.688772 TAGGACATAGGACGTGCTCC 58.311 55.000 14.74 9.09 36.38 4.70
1917 2052 2.029828 CCATAGGACATAGGACGTGCTC 60.030 54.545 14.74 0.00 36.38 4.26
1918 2053 1.964223 CCATAGGACATAGGACGTGCT 59.036 52.381 15.78 15.78 38.68 4.40
1919 2054 1.000955 CCCATAGGACATAGGACGTGC 59.999 57.143 0.00 0.00 33.47 5.34
1920 2055 2.558795 CTCCCATAGGACATAGGACGTG 59.441 54.545 0.00 0.00 37.19 4.49
1921 2056 2.877866 CTCCCATAGGACATAGGACGT 58.122 52.381 0.00 0.00 37.19 4.34
1932 2067 0.753262 CTCAACGACCCTCCCATAGG 59.247 60.000 0.00 0.00 46.09 2.57
1933 2068 1.683917 CTCTCAACGACCCTCCCATAG 59.316 57.143 0.00 0.00 0.00 2.23
1934 2069 1.006758 ACTCTCAACGACCCTCCCATA 59.993 52.381 0.00 0.00 0.00 2.74
1935 2070 0.252284 ACTCTCAACGACCCTCCCAT 60.252 55.000 0.00 0.00 0.00 4.00
1936 2071 0.406750 TACTCTCAACGACCCTCCCA 59.593 55.000 0.00 0.00 0.00 4.37
1937 2072 1.104630 CTACTCTCAACGACCCTCCC 58.895 60.000 0.00 0.00 0.00 4.30
1938 2073 1.473278 CACTACTCTCAACGACCCTCC 59.527 57.143 0.00 0.00 0.00 4.30
1939 2074 1.135344 GCACTACTCTCAACGACCCTC 60.135 57.143 0.00 0.00 0.00 4.30
1940 2075 0.889306 GCACTACTCTCAACGACCCT 59.111 55.000 0.00 0.00 0.00 4.34
1941 2076 0.108756 GGCACTACTCTCAACGACCC 60.109 60.000 0.00 0.00 0.00 4.46
1942 2077 0.108756 GGGCACTACTCTCAACGACC 60.109 60.000 0.00 0.00 0.00 4.79
1943 2078 0.456312 CGGGCACTACTCTCAACGAC 60.456 60.000 0.00 0.00 0.00 4.34
1944 2079 1.592400 CCGGGCACTACTCTCAACGA 61.592 60.000 0.00 0.00 0.00 3.85
1945 2080 1.153823 CCGGGCACTACTCTCAACG 60.154 63.158 0.00 0.00 0.00 4.10
1946 2081 1.218316 CCCGGGCACTACTCTCAAC 59.782 63.158 8.08 0.00 0.00 3.18
1947 2082 1.987855 CCCCGGGCACTACTCTCAA 60.988 63.158 17.73 0.00 0.00 3.02
1948 2083 2.363795 CCCCGGGCACTACTCTCA 60.364 66.667 17.73 0.00 0.00 3.27
1960 2095 3.087253 TAGTGTCCCATGCCCCGG 61.087 66.667 0.00 0.00 0.00 5.73
1961 2096 2.189521 GTAGTGTCCCATGCCCCG 59.810 66.667 0.00 0.00 0.00 5.73
1962 2097 0.394352 CTTGTAGTGTCCCATGCCCC 60.394 60.000 0.00 0.00 0.00 5.80
1963 2098 0.328258 ACTTGTAGTGTCCCATGCCC 59.672 55.000 0.00 0.00 0.00 5.36
1964 2099 1.453155 CACTTGTAGTGTCCCATGCC 58.547 55.000 0.00 0.00 41.19 4.40
1974 2109 2.300437 GTGAGGAGGAAGCACTTGTAGT 59.700 50.000 0.00 0.00 0.00 2.73
1975 2110 2.672478 CGTGAGGAGGAAGCACTTGTAG 60.672 54.545 0.00 0.00 0.00 2.74
1976 2111 1.272490 CGTGAGGAGGAAGCACTTGTA 59.728 52.381 0.00 0.00 0.00 2.41
1977 2112 0.034059 CGTGAGGAGGAAGCACTTGT 59.966 55.000 0.00 0.00 0.00 3.16
1978 2113 2.832931 CGTGAGGAGGAAGCACTTG 58.167 57.895 0.00 0.00 0.00 3.16
1991 2126 3.357079 GCAGTGGCAACCCGTGAG 61.357 66.667 0.00 0.00 40.72 3.51
2001 2136 1.023513 GTGAGATCCTGTGCAGTGGC 61.024 60.000 0.00 0.00 41.68 5.01
2002 2137 0.392193 GGTGAGATCCTGTGCAGTGG 60.392 60.000 0.00 0.00 0.00 4.00
2003 2138 0.392193 GGGTGAGATCCTGTGCAGTG 60.392 60.000 0.00 0.00 0.00 3.66
2004 2139 1.892819 CGGGTGAGATCCTGTGCAGT 61.893 60.000 0.00 0.00 0.00 4.40
2005 2140 1.153489 CGGGTGAGATCCTGTGCAG 60.153 63.158 0.00 0.00 0.00 4.41
2006 2141 2.659063 CCGGGTGAGATCCTGTGCA 61.659 63.158 0.00 0.00 32.33 4.57
2007 2142 2.185310 AACCGGGTGAGATCCTGTGC 62.185 60.000 6.32 0.00 32.33 4.57
2008 2143 0.324943 AAACCGGGTGAGATCCTGTG 59.675 55.000 6.32 0.00 32.33 3.66
2009 2144 0.324943 CAAACCGGGTGAGATCCTGT 59.675 55.000 6.32 0.00 32.33 4.00
2010 2145 1.026718 GCAAACCGGGTGAGATCCTG 61.027 60.000 6.32 0.00 0.00 3.86
2011 2146 1.201429 AGCAAACCGGGTGAGATCCT 61.201 55.000 6.32 0.00 0.00 3.24
2012 2147 0.744771 GAGCAAACCGGGTGAGATCC 60.745 60.000 6.32 0.00 0.00 3.36
2013 2148 0.036388 TGAGCAAACCGGGTGAGATC 60.036 55.000 6.32 4.74 0.00 2.75
2014 2149 0.620556 ATGAGCAAACCGGGTGAGAT 59.379 50.000 6.32 0.00 0.00 2.75
2015 2150 1.066430 GTATGAGCAAACCGGGTGAGA 60.066 52.381 6.32 0.00 0.00 3.27
2016 2151 1.066143 AGTATGAGCAAACCGGGTGAG 60.066 52.381 6.32 0.00 0.00 3.51
2017 2152 0.981183 AGTATGAGCAAACCGGGTGA 59.019 50.000 6.32 0.00 0.00 4.02
2018 2153 1.086696 CAGTATGAGCAAACCGGGTG 58.913 55.000 6.32 4.43 39.69 4.61
2019 2154 0.690762 ACAGTATGAGCAAACCGGGT 59.309 50.000 6.32 0.00 39.69 5.28
2020 2155 1.468520 CAACAGTATGAGCAAACCGGG 59.531 52.381 6.32 0.00 39.69 5.73
2021 2156 1.135689 GCAACAGTATGAGCAAACCGG 60.136 52.381 0.00 0.00 39.69 5.28
2022 2157 1.806542 AGCAACAGTATGAGCAAACCG 59.193 47.619 0.00 0.00 41.61 4.44
2023 2158 3.503748 AGAAGCAACAGTATGAGCAAACC 59.496 43.478 0.00 0.00 41.61 3.27
2024 2159 4.756084 AGAAGCAACAGTATGAGCAAAC 57.244 40.909 0.00 0.00 41.61 2.93
2025 2160 5.772825 AAAGAAGCAACAGTATGAGCAAA 57.227 34.783 0.00 0.00 41.61 3.68
2026 2161 5.299028 TGAAAAGAAGCAACAGTATGAGCAA 59.701 36.000 0.00 0.00 41.61 3.91
2027 2162 4.821260 TGAAAAGAAGCAACAGTATGAGCA 59.179 37.500 0.00 0.00 41.61 4.26
2028 2163 5.362556 TGAAAAGAAGCAACAGTATGAGC 57.637 39.130 0.00 0.00 39.69 4.26
2029 2164 7.137490 TGATGAAAAGAAGCAACAGTATGAG 57.863 36.000 0.00 0.00 39.69 2.90
2030 2165 7.391275 TGATGATGAAAAGAAGCAACAGTATGA 59.609 33.333 0.00 0.00 39.69 2.15
2031 2166 7.532571 TGATGATGAAAAGAAGCAACAGTATG 58.467 34.615 0.00 0.00 46.00 2.39
2032 2167 7.692460 TGATGATGAAAAGAAGCAACAGTAT 57.308 32.000 0.00 0.00 0.00 2.12
2033 2168 7.509141 TTGATGATGAAAAGAAGCAACAGTA 57.491 32.000 0.00 0.00 0.00 2.74
2034 2169 6.395426 TTGATGATGAAAAGAAGCAACAGT 57.605 33.333 0.00 0.00 0.00 3.55
2035 2170 8.975410 TTATTGATGATGAAAAGAAGCAACAG 57.025 30.769 0.00 0.00 0.00 3.16
2036 2171 8.795513 TCTTATTGATGATGAAAAGAAGCAACA 58.204 29.630 0.00 0.00 0.00 3.33
2037 2172 9.630098 TTCTTATTGATGATGAAAAGAAGCAAC 57.370 29.630 0.00 0.00 31.35 4.17
2038 2173 9.850628 CTTCTTATTGATGATGAAAAGAAGCAA 57.149 29.630 9.04 0.00 41.47 3.91
2039 2174 8.464404 CCTTCTTATTGATGATGAAAAGAAGCA 58.536 33.333 14.25 0.00 44.20 3.91
2040 2175 8.680903 TCCTTCTTATTGATGATGAAAAGAAGC 58.319 33.333 14.25 0.00 44.20 3.86
2051 2186 9.412460 AGCATGTTTTATCCTTCTTATTGATGA 57.588 29.630 0.00 0.00 0.00 2.92
2052 2187 9.674824 GAGCATGTTTTATCCTTCTTATTGATG 57.325 33.333 0.00 0.00 0.00 3.07
2053 2188 9.638176 AGAGCATGTTTTATCCTTCTTATTGAT 57.362 29.630 0.00 0.00 0.00 2.57
2054 2189 9.466497 AAGAGCATGTTTTATCCTTCTTATTGA 57.534 29.630 0.00 0.00 0.00 2.57
2057 2192 8.616076 CGAAAGAGCATGTTTTATCCTTCTTAT 58.384 33.333 0.00 0.00 28.54 1.73
2058 2193 7.606456 ACGAAAGAGCATGTTTTATCCTTCTTA 59.394 33.333 0.00 0.00 28.54 2.10
2059 2194 6.431234 ACGAAAGAGCATGTTTTATCCTTCTT 59.569 34.615 0.00 0.00 28.54 2.52
2060 2195 5.940470 ACGAAAGAGCATGTTTTATCCTTCT 59.060 36.000 0.00 0.00 28.54 2.85
2061 2196 6.024049 CACGAAAGAGCATGTTTTATCCTTC 58.976 40.000 0.00 0.00 28.54 3.46
2062 2197 5.106157 CCACGAAAGAGCATGTTTTATCCTT 60.106 40.000 0.00 0.00 28.54 3.36
2063 2198 4.396166 CCACGAAAGAGCATGTTTTATCCT 59.604 41.667 0.00 0.00 28.54 3.24
2064 2199 4.438744 CCCACGAAAGAGCATGTTTTATCC 60.439 45.833 0.00 0.00 28.54 2.59
2065 2200 4.156008 ACCCACGAAAGAGCATGTTTTATC 59.844 41.667 0.00 0.00 28.54 1.75
2066 2201 4.079253 ACCCACGAAAGAGCATGTTTTAT 58.921 39.130 0.00 0.00 28.54 1.40
2067 2202 3.482436 ACCCACGAAAGAGCATGTTTTA 58.518 40.909 0.00 0.00 28.54 1.52
2068 2203 2.306847 ACCCACGAAAGAGCATGTTTT 58.693 42.857 0.00 0.00 28.54 2.43
2069 2204 1.981256 ACCCACGAAAGAGCATGTTT 58.019 45.000 0.00 0.00 32.50 2.83
2070 2205 1.880027 GAACCCACGAAAGAGCATGTT 59.120 47.619 0.00 0.00 0.00 2.71
2071 2206 1.202758 TGAACCCACGAAAGAGCATGT 60.203 47.619 0.00 0.00 0.00 3.21
2072 2207 1.522668 TGAACCCACGAAAGAGCATG 58.477 50.000 0.00 0.00 0.00 4.06
2073 2208 2.270352 TTGAACCCACGAAAGAGCAT 57.730 45.000 0.00 0.00 0.00 3.79
2074 2209 2.270352 ATTGAACCCACGAAAGAGCA 57.730 45.000 0.00 0.00 0.00 4.26
2075 2210 3.751698 AGTTATTGAACCCACGAAAGAGC 59.248 43.478 0.00 0.00 36.08 4.09
2076 2211 5.238650 ACAAGTTATTGAACCCACGAAAGAG 59.761 40.000 0.00 0.00 38.83 2.85
2077 2212 5.127491 ACAAGTTATTGAACCCACGAAAGA 58.873 37.500 0.00 0.00 38.83 2.52
2078 2213 5.432885 ACAAGTTATTGAACCCACGAAAG 57.567 39.130 0.00 0.00 38.83 2.62
2079 2214 5.357314 TGAACAAGTTATTGAACCCACGAAA 59.643 36.000 0.00 0.00 38.83 3.46
2080 2215 4.882427 TGAACAAGTTATTGAACCCACGAA 59.118 37.500 0.00 0.00 38.83 3.85
2081 2216 4.452825 TGAACAAGTTATTGAACCCACGA 58.547 39.130 0.00 0.00 38.83 4.35
2082 2217 4.822036 TGAACAAGTTATTGAACCCACG 57.178 40.909 0.00 0.00 38.83 4.94
2083 2218 6.385649 TCTTGAACAAGTTATTGAACCCAC 57.614 37.500 13.15 0.00 38.83 4.61
2084 2219 7.595819 AATCTTGAACAAGTTATTGAACCCA 57.404 32.000 13.15 0.00 38.83 4.51
2085 2220 7.095649 GCAAATCTTGAACAAGTTATTGAACCC 60.096 37.037 20.92 9.27 38.83 4.11
2086 2221 7.437862 TGCAAATCTTGAACAAGTTATTGAACC 59.562 33.333 20.92 11.67 38.83 3.62
2087 2222 8.351495 TGCAAATCTTGAACAAGTTATTGAAC 57.649 30.769 20.92 12.07 38.83 3.18
2088 2223 8.939201 TTGCAAATCTTGAACAAGTTATTGAA 57.061 26.923 20.92 14.20 38.83 2.69
2089 2224 8.196771 ACTTGCAAATCTTGAACAAGTTATTGA 58.803 29.630 20.92 4.94 46.47 2.57
2090 2225 8.356533 ACTTGCAAATCTTGAACAAGTTATTG 57.643 30.769 13.15 15.26 46.47 1.90
2096 2231 4.935702 TGGACTTGCAAATCTTGAACAAG 58.064 39.130 7.95 8.09 42.63 3.16
2097 2232 4.998671 TGGACTTGCAAATCTTGAACAA 57.001 36.364 7.95 0.00 0.00 2.83
2098 2233 4.441356 GGTTGGACTTGCAAATCTTGAACA 60.441 41.667 7.95 0.00 0.00 3.18
2099 2234 4.051237 GGTTGGACTTGCAAATCTTGAAC 58.949 43.478 7.95 8.29 0.00 3.18
2100 2235 3.703556 TGGTTGGACTTGCAAATCTTGAA 59.296 39.130 7.95 0.00 0.00 2.69
2101 2236 3.295093 TGGTTGGACTTGCAAATCTTGA 58.705 40.909 7.95 0.00 0.00 3.02
2102 2237 3.553508 CCTGGTTGGACTTGCAAATCTTG 60.554 47.826 7.95 0.00 38.35 3.02
2103 2238 2.629617 CCTGGTTGGACTTGCAAATCTT 59.370 45.455 7.95 0.00 38.35 2.40
2104 2239 2.242043 CCTGGTTGGACTTGCAAATCT 58.758 47.619 7.95 0.00 38.35 2.40
2105 2240 1.337167 GCCTGGTTGGACTTGCAAATC 60.337 52.381 0.00 0.00 38.35 2.17
2106 2241 0.681175 GCCTGGTTGGACTTGCAAAT 59.319 50.000 0.00 0.00 38.35 2.32
2107 2242 0.685785 TGCCTGGTTGGACTTGCAAA 60.686 50.000 0.00 0.00 38.35 3.68
2108 2243 1.076412 TGCCTGGTTGGACTTGCAA 60.076 52.632 0.00 0.00 38.35 4.08
2109 2244 1.827789 GTGCCTGGTTGGACTTGCA 60.828 57.895 0.00 0.00 38.35 4.08
2110 2245 2.908073 CGTGCCTGGTTGGACTTGC 61.908 63.158 0.00 0.00 38.35 4.01
2111 2246 1.507141 GACGTGCCTGGTTGGACTTG 61.507 60.000 0.00 0.00 38.35 3.16
2112 2247 1.227853 GACGTGCCTGGTTGGACTT 60.228 57.895 0.00 0.00 38.35 3.01
2113 2248 2.426023 GACGTGCCTGGTTGGACT 59.574 61.111 0.00 0.00 38.35 3.85
2114 2249 2.110213 TGACGTGCCTGGTTGGAC 59.890 61.111 0.00 0.00 38.35 4.02
2115 2250 2.050836 ATGTGACGTGCCTGGTTGGA 62.051 55.000 0.00 0.00 38.35 3.53
2116 2251 1.577328 GATGTGACGTGCCTGGTTGG 61.577 60.000 0.00 0.00 39.35 3.77
2117 2252 0.884259 TGATGTGACGTGCCTGGTTG 60.884 55.000 0.00 0.00 0.00 3.77
2118 2253 0.179032 TTGATGTGACGTGCCTGGTT 60.179 50.000 0.00 0.00 0.00 3.67
2119 2254 0.603707 CTTGATGTGACGTGCCTGGT 60.604 55.000 0.00 0.00 0.00 4.00
2120 2255 1.300971 CCTTGATGTGACGTGCCTGG 61.301 60.000 0.00 0.00 0.00 4.45
2121 2256 0.320683 TCCTTGATGTGACGTGCCTG 60.321 55.000 0.00 0.00 0.00 4.85
2122 2257 0.615331 ATCCTTGATGTGACGTGCCT 59.385 50.000 0.00 0.00 0.00 4.75
2123 2258 0.729116 CATCCTTGATGTGACGTGCC 59.271 55.000 0.00 0.00 35.54 5.01
2124 2259 0.097674 GCATCCTTGATGTGACGTGC 59.902 55.000 0.00 0.00 41.60 5.34
2125 2260 1.441738 TGCATCCTTGATGTGACGTG 58.558 50.000 0.00 0.00 41.60 4.49
2126 2261 2.183478 TTGCATCCTTGATGTGACGT 57.817 45.000 6.01 0.00 41.60 4.34
2127 2262 2.485426 AGTTTGCATCCTTGATGTGACG 59.515 45.455 6.01 0.00 41.60 4.35
2128 2263 3.366679 CCAGTTTGCATCCTTGATGTGAC 60.367 47.826 6.01 3.25 41.60 3.67
2129 2264 2.821378 CCAGTTTGCATCCTTGATGTGA 59.179 45.455 6.01 0.00 41.60 3.58
2130 2265 2.821378 TCCAGTTTGCATCCTTGATGTG 59.179 45.455 6.01 0.00 41.60 3.21
2131 2266 3.087031 CTCCAGTTTGCATCCTTGATGT 58.913 45.455 6.01 0.00 41.60 3.06
2132 2267 2.159282 GCTCCAGTTTGCATCCTTGATG 60.159 50.000 0.00 0.00 42.37 3.07
2133 2268 2.097825 GCTCCAGTTTGCATCCTTGAT 58.902 47.619 0.00 0.00 0.00 2.57
2134 2269 1.202915 TGCTCCAGTTTGCATCCTTGA 60.203 47.619 0.00 0.00 33.94 3.02
2135 2270 1.250328 TGCTCCAGTTTGCATCCTTG 58.750 50.000 0.00 0.00 33.94 3.61
2136 2271 1.891150 CTTGCTCCAGTTTGCATCCTT 59.109 47.619 0.00 0.00 39.07 3.36
2137 2272 1.074405 TCTTGCTCCAGTTTGCATCCT 59.926 47.619 0.00 0.00 39.07 3.24
2138 2273 1.538047 TCTTGCTCCAGTTTGCATCC 58.462 50.000 0.00 0.00 39.07 3.51
2139 2274 2.555757 ACTTCTTGCTCCAGTTTGCATC 59.444 45.455 0.00 0.00 39.07 3.91
2140 2275 2.590821 ACTTCTTGCTCCAGTTTGCAT 58.409 42.857 0.00 0.00 39.07 3.96
2141 2276 2.057137 ACTTCTTGCTCCAGTTTGCA 57.943 45.000 0.00 0.00 37.42 4.08
2142 2277 2.735823 CAACTTCTTGCTCCAGTTTGC 58.264 47.619 0.00 0.00 0.00 3.68
2153 2288 1.506493 ACTCTCAGCGCAACTTCTTG 58.494 50.000 11.47 0.00 0.00 3.02
2154 2289 2.558795 TCTACTCTCAGCGCAACTTCTT 59.441 45.455 11.47 0.00 0.00 2.52
2155 2290 2.163509 TCTACTCTCAGCGCAACTTCT 58.836 47.619 11.47 0.00 0.00 2.85
2156 2291 2.638556 TCTACTCTCAGCGCAACTTC 57.361 50.000 11.47 0.00 0.00 3.01
2157 2292 3.257393 CATTCTACTCTCAGCGCAACTT 58.743 45.455 11.47 0.00 0.00 2.66
2158 2293 2.886081 CATTCTACTCTCAGCGCAACT 58.114 47.619 11.47 0.00 0.00 3.16
2159 2294 1.325943 GCATTCTACTCTCAGCGCAAC 59.674 52.381 11.47 0.00 0.00 4.17
2160 2295 1.066929 TGCATTCTACTCTCAGCGCAA 60.067 47.619 11.47 0.00 0.00 4.85
2161 2296 0.532115 TGCATTCTACTCTCAGCGCA 59.468 50.000 11.47 0.00 0.00 6.09
2162 2297 1.325943 GTTGCATTCTACTCTCAGCGC 59.674 52.381 0.00 0.00 0.00 5.92
2163 2298 1.585668 CGTTGCATTCTACTCTCAGCG 59.414 52.381 0.00 0.00 0.00 5.18
2164 2299 2.881074 TCGTTGCATTCTACTCTCAGC 58.119 47.619 0.00 0.00 0.00 4.26
2165 2300 4.201666 GCTTTCGTTGCATTCTACTCTCAG 60.202 45.833 0.00 0.00 0.00 3.35
2166 2301 3.679980 GCTTTCGTTGCATTCTACTCTCA 59.320 43.478 0.00 0.00 0.00 3.27
2167 2302 3.062774 GGCTTTCGTTGCATTCTACTCTC 59.937 47.826 0.00 0.00 0.00 3.20
2168 2303 3.003480 GGCTTTCGTTGCATTCTACTCT 58.997 45.455 0.00 0.00 0.00 3.24
2169 2304 3.003480 AGGCTTTCGTTGCATTCTACTC 58.997 45.455 0.00 0.00 0.00 2.59
2170 2305 2.744202 CAGGCTTTCGTTGCATTCTACT 59.256 45.455 0.00 0.00 0.00 2.57
2171 2306 2.742053 TCAGGCTTTCGTTGCATTCTAC 59.258 45.455 0.00 0.00 0.00 2.59
2172 2307 3.052455 TCAGGCTTTCGTTGCATTCTA 57.948 42.857 0.00 0.00 0.00 2.10
2173 2308 1.896220 TCAGGCTTTCGTTGCATTCT 58.104 45.000 0.00 0.00 0.00 2.40
2174 2309 2.030805 AGTTCAGGCTTTCGTTGCATTC 60.031 45.455 0.00 0.00 0.00 2.67
2175 2310 1.956477 AGTTCAGGCTTTCGTTGCATT 59.044 42.857 0.00 0.00 0.00 3.56
2176 2311 1.537202 GAGTTCAGGCTTTCGTTGCAT 59.463 47.619 0.00 0.00 0.00 3.96
2177 2312 0.944386 GAGTTCAGGCTTTCGTTGCA 59.056 50.000 0.00 0.00 0.00 4.08
2178 2313 1.230324 AGAGTTCAGGCTTTCGTTGC 58.770 50.000 0.00 0.00 0.00 4.17
2179 2314 3.914312 TCTAGAGTTCAGGCTTTCGTTG 58.086 45.455 0.00 0.00 0.00 4.10
2180 2315 3.827302 TCTCTAGAGTTCAGGCTTTCGTT 59.173 43.478 19.21 0.00 0.00 3.85
2181 2316 3.422796 TCTCTAGAGTTCAGGCTTTCGT 58.577 45.455 19.21 0.00 0.00 3.85
2182 2317 3.733684 GCTCTCTAGAGTTCAGGCTTTCG 60.734 52.174 19.21 0.00 43.85 3.46
2183 2318 3.430236 GGCTCTCTAGAGTTCAGGCTTTC 60.430 52.174 19.21 0.00 43.85 2.62
2184 2319 2.499693 GGCTCTCTAGAGTTCAGGCTTT 59.500 50.000 19.21 0.00 43.85 3.51
2185 2320 2.107366 GGCTCTCTAGAGTTCAGGCTT 58.893 52.381 19.21 0.00 43.85 4.35
2186 2321 1.287739 AGGCTCTCTAGAGTTCAGGCT 59.712 52.381 22.93 22.93 43.85 4.58
2187 2322 1.775385 AGGCTCTCTAGAGTTCAGGC 58.225 55.000 19.21 19.65 43.85 4.85
2188 2323 2.884639 GCTAGGCTCTCTAGAGTTCAGG 59.115 54.545 19.21 8.00 46.48 3.86
2189 2324 2.884639 GGCTAGGCTCTCTAGAGTTCAG 59.115 54.545 19.21 10.70 46.48 3.02
2190 2325 2.242452 TGGCTAGGCTCTCTAGAGTTCA 59.758 50.000 19.21 0.00 46.48 3.18
2191 2326 2.621526 GTGGCTAGGCTCTCTAGAGTTC 59.378 54.545 19.21 11.65 46.48 3.01
2192 2327 2.661718 GTGGCTAGGCTCTCTAGAGTT 58.338 52.381 19.21 6.81 46.48 3.01
2193 2328 1.133606 GGTGGCTAGGCTCTCTAGAGT 60.134 57.143 19.21 2.76 46.48 3.24
2194 2329 1.144913 AGGTGGCTAGGCTCTCTAGAG 59.855 57.143 18.18 13.98 46.48 2.43
2195 2330 1.133637 CAGGTGGCTAGGCTCTCTAGA 60.134 57.143 18.18 0.00 46.48 2.43
2196 2331 1.327303 CAGGTGGCTAGGCTCTCTAG 58.673 60.000 18.18 2.32 46.33 2.43
2197 2332 0.105964 CCAGGTGGCTAGGCTCTCTA 60.106 60.000 18.18 0.00 0.00 2.43
2198 2333 1.382420 CCAGGTGGCTAGGCTCTCT 60.382 63.158 18.18 10.13 0.00 3.10
2199 2334 1.381872 TCCAGGTGGCTAGGCTCTC 60.382 63.158 18.18 8.09 34.44 3.20
2200 2335 1.687493 GTCCAGGTGGCTAGGCTCT 60.687 63.158 18.18 11.85 34.44 4.09
2201 2336 2.904131 GTCCAGGTGGCTAGGCTC 59.096 66.667 18.18 13.83 34.44 4.70
2202 2337 3.077556 CGTCCAGGTGGCTAGGCT 61.078 66.667 18.18 0.00 34.44 4.58
2203 2338 3.391382 ACGTCCAGGTGGCTAGGC 61.391 66.667 9.85 9.85 34.44 3.93
2204 2339 1.949847 CTCACGTCCAGGTGGCTAGG 61.950 65.000 0.00 0.00 38.46 3.02
2205 2340 1.513158 CTCACGTCCAGGTGGCTAG 59.487 63.158 0.00 0.00 38.46 3.42
2206 2341 1.982395 CCTCACGTCCAGGTGGCTA 60.982 63.158 2.27 0.00 38.46 3.93
2207 2342 3.314331 CCTCACGTCCAGGTGGCT 61.314 66.667 2.27 0.00 38.46 4.75
2208 2343 2.660064 ATCCTCACGTCCAGGTGGC 61.660 63.158 9.47 0.00 38.46 5.01
2209 2344 1.219124 CATCCTCACGTCCAGGTGG 59.781 63.158 9.47 0.00 38.46 4.61
2210 2345 0.321671 AACATCCTCACGTCCAGGTG 59.678 55.000 9.47 9.42 39.29 4.00
2211 2346 0.321671 CAACATCCTCACGTCCAGGT 59.678 55.000 9.47 0.00 32.20 4.00
2212 2347 0.608130 TCAACATCCTCACGTCCAGG 59.392 55.000 3.91 3.91 0.00 4.45
2213 2348 1.000843 TGTCAACATCCTCACGTCCAG 59.999 52.381 0.00 0.00 0.00 3.86
2214 2349 1.044611 TGTCAACATCCTCACGTCCA 58.955 50.000 0.00 0.00 0.00 4.02
2215 2350 2.163818 TTGTCAACATCCTCACGTCC 57.836 50.000 0.00 0.00 0.00 4.79
2216 2351 3.067106 ACATTGTCAACATCCTCACGTC 58.933 45.455 0.00 0.00 0.00 4.34
2217 2352 3.126001 ACATTGTCAACATCCTCACGT 57.874 42.857 0.00 0.00 0.00 4.49
2218 2353 3.250762 ACAACATTGTCAACATCCTCACG 59.749 43.478 0.00 0.00 36.50 4.35
2219 2354 4.836125 ACAACATTGTCAACATCCTCAC 57.164 40.909 0.00 0.00 36.50 3.51
2230 2365 5.379304 GGAGTAGTCCGTGACAACATTGTC 61.379 50.000 16.27 16.27 44.42 3.18
2231 2366 3.554337 GGAGTAGTCCGTGACAACATTGT 60.554 47.826 0.00 0.00 37.31 2.71
2232 2367 2.993899 GGAGTAGTCCGTGACAACATTG 59.006 50.000 0.00 0.00 34.60 2.82
2233 2368 3.314541 GGAGTAGTCCGTGACAACATT 57.685 47.619 0.00 0.00 34.60 2.71
2244 2379 0.459078 GGTAGGCGTTGGAGTAGTCC 59.541 60.000 9.91 9.91 44.24 3.85
2245 2380 1.472188 AGGTAGGCGTTGGAGTAGTC 58.528 55.000 0.00 0.00 0.00 2.59
2246 2381 1.549170 CAAGGTAGGCGTTGGAGTAGT 59.451 52.381 0.00 0.00 36.98 2.73
2247 2382 2.295253 CAAGGTAGGCGTTGGAGTAG 57.705 55.000 0.00 0.00 36.98 2.57
2257 2392 7.789214 CCTTTGGGATATAGCCAAGGTAGGC 62.789 52.000 15.03 0.00 44.80 3.93
2258 2393 4.263506 CCTTTGGGATATAGCCAAGGTAGG 60.264 50.000 15.03 6.48 33.58 3.18
2259 2394 4.597507 TCCTTTGGGATATAGCCAAGGTAG 59.402 45.833 20.08 5.12 36.57 3.18
2260 2395 4.572978 TCCTTTGGGATATAGCCAAGGTA 58.427 43.478 20.08 9.00 36.57 3.08
2261 2396 3.403322 TCCTTTGGGATATAGCCAAGGT 58.597 45.455 20.08 0.00 36.57 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.