Multiple sequence alignment - TraesCS5D01G188400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G188400 chr5D 100.000 2504 0 0 1 2504 290673466 290675969 0.000000e+00 4625.0
1 TraesCS5D01G188400 chr5B 93.800 1129 58 4 641 1768 331279345 331280462 0.000000e+00 1687.0
2 TraesCS5D01G188400 chr5B 89.299 271 11 8 2134 2392 331280848 331281112 8.640000e-85 324.0
3 TraesCS5D01G188400 chr5B 93.204 206 7 5 1770 1973 447548780 447548580 1.880000e-76 296.0
4 TraesCS5D01G188400 chr5B 92.169 166 10 3 1972 2135 331280472 331280636 5.390000e-57 231.0
5 TraesCS5D01G188400 chr5B 87.681 138 12 5 426 561 396831846 396831980 3.330000e-34 156.0
6 TraesCS5D01G188400 chr5B 84.821 112 15 2 2393 2503 331281075 331281185 7.320000e-21 111.0
7 TraesCS5D01G188400 chr5B 100.000 31 0 0 75 105 103343656 103343686 9.670000e-05 58.4
8 TraesCS5D01G188400 chr5A 91.876 1194 49 12 567 1733 382901084 382902256 0.000000e+00 1624.0
9 TraesCS5D01G188400 chr5A 97.059 204 2 1 1770 1973 71385927 71385728 8.580000e-90 340.0
10 TraesCS5D01G188400 chr5A 94.634 205 5 3 1770 1973 644450916 644450717 1.870000e-81 313.0
11 TraesCS5D01G188400 chr3A 96.098 205 3 2 1770 1973 674514746 674514546 1.860000e-86 329.0
12 TraesCS5D01G188400 chr3A 100.000 31 0 0 75 105 65438559 65438589 9.670000e-05 58.4
13 TraesCS5D01G188400 chrUn 89.583 192 4 3 1770 1961 17300929 17301104 1.940000e-56 230.0
14 TraesCS5D01G188400 chr2D 92.143 140 7 4 426 562 463917003 463916865 7.070000e-46 195.0
15 TraesCS5D01G188400 chr2D 88.971 136 12 3 426 560 108451757 108451890 5.540000e-37 165.0
16 TraesCS5D01G188400 chr4B 91.176 136 9 3 426 560 289067184 289067051 5.500000e-42 182.0
17 TraesCS5D01G188400 chr4B 90.441 136 10 3 426 560 289104644 289104511 2.560000e-40 176.0
18 TraesCS5D01G188400 chr6B 90.441 136 10 3 426 560 439468872 439468739 2.560000e-40 176.0
19 TraesCS5D01G188400 chr6B 89.706 136 11 3 426 560 667945584 667945717 1.190000e-38 171.0
20 TraesCS5D01G188400 chr6B 100.000 31 0 0 75 105 141091545 141091515 9.670000e-05 58.4
21 TraesCS5D01G188400 chr6B 88.462 52 1 1 54 105 173653850 173653804 9.670000e-05 58.4
22 TraesCS5D01G188400 chr6B 85.965 57 3 4 75 127 40067607 40067552 3.480000e-04 56.5
23 TraesCS5D01G188400 chr4D 97.059 102 2 1 1767 1867 437684487 437684588 1.190000e-38 171.0
24 TraesCS5D01G188400 chr4D 85.135 74 8 3 75 145 401412237 401412310 3.450000e-09 73.1
25 TraesCS5D01G188400 chr7B 90.566 53 2 1 54 103 538685691 538685743 1.610000e-07 67.6
26 TraesCS5D01G188400 chr6A 100.000 31 0 0 75 105 502959720 502959690 9.670000e-05 58.4
27 TraesCS5D01G188400 chr1D 100.000 31 0 0 75 105 437684869 437684899 9.670000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G188400 chr5D 290673466 290675969 2503 False 4625.00 4625 100.00000 1 2504 1 chr5D.!!$F1 2503
1 TraesCS5D01G188400 chr5B 331279345 331281185 1840 False 588.25 1687 90.02225 641 2503 4 chr5B.!!$F3 1862
2 TraesCS5D01G188400 chr5A 382901084 382902256 1172 False 1624.00 1624 91.87600 567 1733 1 chr5A.!!$F1 1166

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
494 495 0.036164 TTCCGCCATGTGTAACTGCT 59.964 50.0 0.0 0.0 38.04 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1838 1869 0.034059 GAGGTCATGCCCTACGGATG 59.966 60.0 0.0 0.0 38.26 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.330466 TGATGACGTCATGTTAAAAATAAGGT 57.670 30.769 34.48 6.31 36.57 3.50
31 32 9.438228 TGATGACGTCATGTTAAAAATAAGGTA 57.562 29.630 34.48 0.00 36.57 3.08
63 64 9.310449 TCACACCTAGATAAGATACTATTTCCC 57.690 37.037 0.00 0.00 0.00 3.97
64 65 9.090103 CACACCTAGATAAGATACTATTTCCCA 57.910 37.037 0.00 0.00 0.00 4.37
65 66 9.845214 ACACCTAGATAAGATACTATTTCCCAT 57.155 33.333 0.00 0.00 0.00 4.00
75 76 9.607333 AAGATACTATTTCCCATCTAGATGTGA 57.393 33.333 27.03 20.58 37.11 3.58
76 77 9.781425 AGATACTATTTCCCATCTAGATGTGAT 57.219 33.333 27.03 17.62 37.11 3.06
77 78 9.814899 GATACTATTTCCCATCTAGATGTGATG 57.185 37.037 27.03 14.11 40.51 3.07
78 79 7.623999 ACTATTTCCCATCTAGATGTGATGT 57.376 36.000 27.03 16.41 39.54 3.06
79 80 7.448420 ACTATTTCCCATCTAGATGTGATGTG 58.552 38.462 27.03 15.39 39.54 3.21
80 81 5.955961 TTTCCCATCTAGATGTGATGTGA 57.044 39.130 27.03 12.88 39.54 3.58
81 82 5.955961 TTCCCATCTAGATGTGATGTGAA 57.044 39.130 27.03 16.85 39.54 3.18
82 83 5.955961 TCCCATCTAGATGTGATGTGAAA 57.044 39.130 27.03 0.00 39.54 2.69
83 84 6.505048 TCCCATCTAGATGTGATGTGAAAT 57.495 37.500 27.03 0.00 39.54 2.17
84 85 7.616528 TCCCATCTAGATGTGATGTGAAATA 57.383 36.000 27.03 0.00 39.54 1.40
85 86 7.674120 TCCCATCTAGATGTGATGTGAAATAG 58.326 38.462 27.03 10.03 39.54 1.73
86 87 7.290948 TCCCATCTAGATGTGATGTGAAATAGT 59.709 37.037 27.03 0.00 39.54 2.12
87 88 7.935755 CCCATCTAGATGTGATGTGAAATAGTT 59.064 37.037 27.03 0.00 39.54 2.24
88 89 9.987272 CCATCTAGATGTGATGTGAAATAGTTA 57.013 33.333 27.03 0.00 39.54 2.24
94 95 9.539825 AGATGTGATGTGAAATAGTTATCTCAC 57.460 33.333 0.00 0.00 38.91 3.51
109 110 8.759481 AGTTATCTCACATCTAAGTCTCATCA 57.241 34.615 0.00 0.00 0.00 3.07
110 111 8.629158 AGTTATCTCACATCTAAGTCTCATCAC 58.371 37.037 0.00 0.00 0.00 3.06
111 112 8.409371 GTTATCTCACATCTAAGTCTCATCACA 58.591 37.037 0.00 0.00 0.00 3.58
112 113 7.600231 ATCTCACATCTAAGTCTCATCACAT 57.400 36.000 0.00 0.00 0.00 3.21
113 114 6.803642 TCTCACATCTAAGTCTCATCACATG 58.196 40.000 0.00 0.00 0.00 3.21
114 115 6.604795 TCTCACATCTAAGTCTCATCACATGA 59.395 38.462 0.00 0.00 37.76 3.07
115 116 7.287235 TCTCACATCTAAGTCTCATCACATGAT 59.713 37.037 0.00 0.00 38.85 2.45
116 117 7.432059 TCACATCTAAGTCTCATCACATGATC 58.568 38.462 0.00 0.00 38.85 2.92
117 118 7.069085 TCACATCTAAGTCTCATCACATGATCA 59.931 37.037 0.00 0.00 38.85 2.92
118 119 7.709613 CACATCTAAGTCTCATCACATGATCAA 59.290 37.037 0.00 0.00 38.85 2.57
119 120 7.927092 ACATCTAAGTCTCATCACATGATCAAG 59.073 37.037 0.00 0.00 38.85 3.02
120 121 6.814043 TCTAAGTCTCATCACATGATCAAGG 58.186 40.000 0.00 0.00 38.85 3.61
121 122 3.806380 AGTCTCATCACATGATCAAGGC 58.194 45.455 0.00 0.00 38.85 4.35
122 123 3.455177 AGTCTCATCACATGATCAAGGCT 59.545 43.478 0.00 0.00 38.85 4.58
123 124 3.560481 GTCTCATCACATGATCAAGGCTG 59.440 47.826 0.00 0.00 38.85 4.85
124 125 3.199289 TCTCATCACATGATCAAGGCTGT 59.801 43.478 0.00 0.00 38.85 4.40
125 126 4.406649 TCTCATCACATGATCAAGGCTGTA 59.593 41.667 0.00 0.00 38.85 2.74
126 127 5.101648 TCATCACATGATCAAGGCTGTAA 57.898 39.130 0.00 0.00 33.59 2.41
127 128 5.687780 TCATCACATGATCAAGGCTGTAAT 58.312 37.500 0.00 0.00 33.59 1.89
128 129 6.124340 TCATCACATGATCAAGGCTGTAATT 58.876 36.000 0.00 0.00 33.59 1.40
129 130 6.604396 TCATCACATGATCAAGGCTGTAATTT 59.396 34.615 0.00 0.00 33.59 1.82
130 131 6.839124 TCACATGATCAAGGCTGTAATTTT 57.161 33.333 0.00 0.00 0.00 1.82
131 132 6.623486 TCACATGATCAAGGCTGTAATTTTG 58.377 36.000 0.00 0.00 0.00 2.44
132 133 6.209192 TCACATGATCAAGGCTGTAATTTTGT 59.791 34.615 0.00 0.00 0.00 2.83
133 134 6.309494 CACATGATCAAGGCTGTAATTTTGTG 59.691 38.462 0.00 0.99 0.00 3.33
134 135 4.808558 TGATCAAGGCTGTAATTTTGTGC 58.191 39.130 0.00 0.00 0.00 4.57
135 136 4.280425 TGATCAAGGCTGTAATTTTGTGCA 59.720 37.500 0.00 0.00 0.00 4.57
136 137 4.662468 TCAAGGCTGTAATTTTGTGCAA 57.338 36.364 0.00 0.00 0.00 4.08
137 138 5.016051 TCAAGGCTGTAATTTTGTGCAAA 57.984 34.783 0.00 0.00 0.00 3.68
138 139 5.609423 TCAAGGCTGTAATTTTGTGCAAAT 58.391 33.333 0.00 0.00 36.57 2.32
139 140 6.054295 TCAAGGCTGTAATTTTGTGCAAATT 58.946 32.000 0.00 0.00 45.45 1.82
140 141 6.541641 TCAAGGCTGTAATTTTGTGCAAATTT 59.458 30.769 0.43 8.97 41.57 1.82
141 142 6.940831 AGGCTGTAATTTTGTGCAAATTTT 57.059 29.167 9.19 5.01 41.57 1.82
142 143 6.727215 AGGCTGTAATTTTGTGCAAATTTTG 58.273 32.000 4.72 4.72 41.57 2.44
143 144 6.318396 AGGCTGTAATTTTGTGCAAATTTTGT 59.682 30.769 10.65 0.00 41.57 2.83
144 145 6.971756 GGCTGTAATTTTGTGCAAATTTTGTT 59.028 30.769 10.65 0.00 41.57 2.83
145 146 8.125448 GGCTGTAATTTTGTGCAAATTTTGTTA 58.875 29.630 10.65 0.00 41.57 2.41
146 147 9.157259 GCTGTAATTTTGTGCAAATTTTGTTAG 57.843 29.630 10.65 5.79 41.57 2.34
151 152 9.949174 AATTTTGTGCAAATTTTGTTAGAATCC 57.051 25.926 10.65 0.00 41.57 3.01
152 153 7.489574 TTTGTGCAAATTTTGTTAGAATCCC 57.510 32.000 10.65 0.00 0.00 3.85
153 154 5.226396 TGTGCAAATTTTGTTAGAATCCCG 58.774 37.500 10.65 0.00 0.00 5.14
154 155 5.010112 TGTGCAAATTTTGTTAGAATCCCGA 59.990 36.000 10.65 0.00 0.00 5.14
155 156 5.923684 GTGCAAATTTTGTTAGAATCCCGAA 59.076 36.000 10.65 0.00 0.00 4.30
156 157 6.422400 GTGCAAATTTTGTTAGAATCCCGAAA 59.578 34.615 10.65 0.00 0.00 3.46
157 158 6.422400 TGCAAATTTTGTTAGAATCCCGAAAC 59.578 34.615 10.65 0.00 0.00 2.78
158 159 6.422400 GCAAATTTTGTTAGAATCCCGAAACA 59.578 34.615 10.65 0.00 0.00 2.83
159 160 7.359181 GCAAATTTTGTTAGAATCCCGAAACAG 60.359 37.037 10.65 0.00 33.70 3.16
160 161 4.759516 TTTGTTAGAATCCCGAAACAGC 57.240 40.909 0.00 0.00 33.70 4.40
161 162 3.410631 TGTTAGAATCCCGAAACAGCA 57.589 42.857 0.00 0.00 0.00 4.41
162 163 3.334691 TGTTAGAATCCCGAAACAGCAG 58.665 45.455 0.00 0.00 0.00 4.24
163 164 2.024176 TAGAATCCCGAAACAGCAGC 57.976 50.000 0.00 0.00 0.00 5.25
164 165 0.678048 AGAATCCCGAAACAGCAGCC 60.678 55.000 0.00 0.00 0.00 4.85
165 166 0.960364 GAATCCCGAAACAGCAGCCA 60.960 55.000 0.00 0.00 0.00 4.75
166 167 0.539438 AATCCCGAAACAGCAGCCAA 60.539 50.000 0.00 0.00 0.00 4.52
167 168 1.244019 ATCCCGAAACAGCAGCCAAC 61.244 55.000 0.00 0.00 0.00 3.77
168 169 2.252260 CCGAAACAGCAGCCAACG 59.748 61.111 0.00 0.00 0.00 4.10
169 170 2.427410 CGAAACAGCAGCCAACGC 60.427 61.111 0.00 0.00 0.00 4.84
170 171 2.050077 GAAACAGCAGCCAACGCC 60.050 61.111 0.00 0.00 34.57 5.68
171 172 3.879351 GAAACAGCAGCCAACGCCG 62.879 63.158 0.00 0.00 34.57 6.46
172 173 4.927782 AACAGCAGCCAACGCCGA 62.928 61.111 0.00 0.00 34.57 5.54
177 178 3.118454 CAGCCAACGCCGACGATT 61.118 61.111 0.00 0.00 43.93 3.34
178 179 2.358247 AGCCAACGCCGACGATTT 60.358 55.556 0.00 0.00 43.93 2.17
179 180 2.097728 GCCAACGCCGACGATTTC 59.902 61.111 0.00 0.00 43.93 2.17
187 188 3.693245 CGACGATTTCGGGAGCAG 58.307 61.111 4.84 0.00 44.60 4.24
188 189 1.153823 CGACGATTTCGGGAGCAGT 60.154 57.895 4.84 0.00 44.60 4.40
189 190 1.140407 CGACGATTTCGGGAGCAGTC 61.140 60.000 4.84 0.00 44.60 3.51
190 191 0.108804 GACGATTTCGGGAGCAGTCA 60.109 55.000 4.84 0.00 44.95 3.41
191 192 0.389948 ACGATTTCGGGAGCAGTCAC 60.390 55.000 4.84 0.00 44.95 3.67
196 197 3.680786 CGGGAGCAGTCACGTCCA 61.681 66.667 0.00 0.00 45.13 4.02
197 198 2.048127 GGGAGCAGTCACGTCCAC 60.048 66.667 0.00 0.00 31.31 4.02
198 199 2.574955 GGGAGCAGTCACGTCCACT 61.575 63.158 0.00 0.00 31.31 4.00
199 200 1.367840 GGAGCAGTCACGTCCACTT 59.632 57.895 0.00 0.00 0.00 3.16
200 201 0.249911 GGAGCAGTCACGTCCACTTT 60.250 55.000 0.00 0.00 0.00 2.66
201 202 1.583054 GAGCAGTCACGTCCACTTTT 58.417 50.000 0.00 0.00 0.00 2.27
202 203 1.527311 GAGCAGTCACGTCCACTTTTC 59.473 52.381 0.00 0.00 0.00 2.29
203 204 1.139058 AGCAGTCACGTCCACTTTTCT 59.861 47.619 0.00 0.00 0.00 2.52
204 205 1.527311 GCAGTCACGTCCACTTTTCTC 59.473 52.381 0.00 0.00 0.00 2.87
205 206 2.803492 GCAGTCACGTCCACTTTTCTCT 60.803 50.000 0.00 0.00 0.00 3.10
206 207 3.552273 GCAGTCACGTCCACTTTTCTCTA 60.552 47.826 0.00 0.00 0.00 2.43
207 208 4.617959 CAGTCACGTCCACTTTTCTCTAA 58.382 43.478 0.00 0.00 0.00 2.10
208 209 4.444720 CAGTCACGTCCACTTTTCTCTAAC 59.555 45.833 0.00 0.00 0.00 2.34
209 210 4.341520 AGTCACGTCCACTTTTCTCTAACT 59.658 41.667 0.00 0.00 0.00 2.24
210 211 5.048507 GTCACGTCCACTTTTCTCTAACTT 58.951 41.667 0.00 0.00 0.00 2.66
211 212 6.040166 AGTCACGTCCACTTTTCTCTAACTTA 59.960 38.462 0.00 0.00 0.00 2.24
212 213 6.698766 GTCACGTCCACTTTTCTCTAACTTAA 59.301 38.462 0.00 0.00 0.00 1.85
213 214 7.384387 GTCACGTCCACTTTTCTCTAACTTAAT 59.616 37.037 0.00 0.00 0.00 1.40
214 215 7.929785 TCACGTCCACTTTTCTCTAACTTAATT 59.070 33.333 0.00 0.00 0.00 1.40
215 216 8.557029 CACGTCCACTTTTCTCTAACTTAATTT 58.443 33.333 0.00 0.00 0.00 1.82
216 217 9.768662 ACGTCCACTTTTCTCTAACTTAATTTA 57.231 29.630 0.00 0.00 0.00 1.40
230 231 9.939802 CTAACTTAATTTAGGACTTACAGGTGT 57.060 33.333 4.98 0.00 0.00 4.16
236 237 8.788325 AATTTAGGACTTACAGGTGTATCAAC 57.212 34.615 0.00 0.00 0.00 3.18
237 238 7.549147 TTTAGGACTTACAGGTGTATCAACT 57.451 36.000 0.00 0.00 0.00 3.16
238 239 7.549147 TTAGGACTTACAGGTGTATCAACTT 57.451 36.000 0.00 0.00 0.00 2.66
239 240 8.654485 TTAGGACTTACAGGTGTATCAACTTA 57.346 34.615 0.00 0.00 0.00 2.24
240 241 6.932947 AGGACTTACAGGTGTATCAACTTAC 58.067 40.000 0.00 0.00 0.00 2.34
241 242 6.495872 AGGACTTACAGGTGTATCAACTTACA 59.504 38.462 0.00 0.00 0.00 2.41
242 243 7.015877 AGGACTTACAGGTGTATCAACTTACAA 59.984 37.037 0.00 0.00 34.05 2.41
243 244 7.331193 GGACTTACAGGTGTATCAACTTACAAG 59.669 40.741 0.00 0.00 34.05 3.16
244 245 7.159372 ACTTACAGGTGTATCAACTTACAAGG 58.841 38.462 0.00 0.00 34.05 3.61
245 246 4.324267 ACAGGTGTATCAACTTACAAGGC 58.676 43.478 0.00 0.00 34.05 4.35
246 247 4.041691 ACAGGTGTATCAACTTACAAGGCT 59.958 41.667 0.00 0.00 34.05 4.58
247 248 5.247564 ACAGGTGTATCAACTTACAAGGCTA 59.752 40.000 0.00 0.00 34.05 3.93
248 249 5.581085 CAGGTGTATCAACTTACAAGGCTAC 59.419 44.000 0.00 0.00 34.05 3.58
249 250 4.874396 GGTGTATCAACTTACAAGGCTACC 59.126 45.833 0.00 0.00 34.05 3.18
250 251 4.874396 GTGTATCAACTTACAAGGCTACCC 59.126 45.833 0.00 0.00 34.05 3.69
251 252 4.781087 TGTATCAACTTACAAGGCTACCCT 59.219 41.667 0.00 0.00 45.77 4.34
264 265 4.533815 AGGCTACCCTTAAATTACAAGGC 58.466 43.478 11.61 3.05 41.13 4.35
265 266 4.229812 AGGCTACCCTTAAATTACAAGGCT 59.770 41.667 11.61 3.49 41.13 4.58
266 267 5.430745 AGGCTACCCTTAAATTACAAGGCTA 59.569 40.000 11.61 4.29 41.13 3.93
267 268 5.530171 GGCTACCCTTAAATTACAAGGCTAC 59.470 44.000 11.61 3.45 41.13 3.58
268 269 5.530171 GCTACCCTTAAATTACAAGGCTACC 59.470 44.000 11.61 0.00 41.13 3.18
269 270 5.523883 ACCCTTAAATTACAAGGCTACCA 57.476 39.130 11.61 0.00 41.13 3.25
270 271 5.894653 ACCCTTAAATTACAAGGCTACCAA 58.105 37.500 11.61 0.00 41.13 3.67
271 272 6.499436 ACCCTTAAATTACAAGGCTACCAAT 58.501 36.000 11.61 0.00 41.13 3.16
272 273 6.957606 ACCCTTAAATTACAAGGCTACCAATT 59.042 34.615 11.61 0.00 41.13 2.32
273 274 7.093509 ACCCTTAAATTACAAGGCTACCAATTG 60.094 37.037 11.61 0.00 41.13 2.32
274 275 7.123547 CCCTTAAATTACAAGGCTACCAATTGA 59.876 37.037 7.12 0.00 41.13 2.57
275 276 8.527810 CCTTAAATTACAAGGCTACCAATTGAA 58.472 33.333 7.12 0.00 36.41 2.69
276 277 9.573133 CTTAAATTACAAGGCTACCAATTGAAG 57.427 33.333 7.12 5.23 0.00 3.02
277 278 5.582689 ATTACAAGGCTACCAATTGAAGC 57.417 39.130 19.02 19.02 35.47 3.86
278 279 3.160679 ACAAGGCTACCAATTGAAGCT 57.839 42.857 23.50 12.53 36.48 3.74
279 280 3.500343 ACAAGGCTACCAATTGAAGCTT 58.500 40.909 23.50 17.40 36.48 3.74
280 281 4.662278 ACAAGGCTACCAATTGAAGCTTA 58.338 39.130 23.50 0.00 36.48 3.09
281 282 4.459337 ACAAGGCTACCAATTGAAGCTTAC 59.541 41.667 23.50 12.81 36.48 2.34
282 283 3.621558 AGGCTACCAATTGAAGCTTACC 58.378 45.455 23.50 12.55 36.48 2.85
283 284 2.688446 GGCTACCAATTGAAGCTTACCC 59.312 50.000 23.50 9.88 36.48 3.69
284 285 2.354821 GCTACCAATTGAAGCTTACCCG 59.645 50.000 19.61 0.00 33.40 5.28
285 286 1.173913 ACCAATTGAAGCTTACCCGC 58.826 50.000 7.12 0.00 0.00 6.13
286 287 1.173043 CCAATTGAAGCTTACCCGCA 58.827 50.000 7.12 0.00 0.00 5.69
287 288 1.543802 CCAATTGAAGCTTACCCGCAA 59.456 47.619 7.12 0.00 0.00 4.85
288 289 2.029470 CCAATTGAAGCTTACCCGCAAA 60.029 45.455 7.12 0.00 0.00 3.68
289 290 3.553922 CCAATTGAAGCTTACCCGCAAAA 60.554 43.478 7.12 0.00 0.00 2.44
290 291 4.054671 CAATTGAAGCTTACCCGCAAAAA 58.945 39.130 0.00 0.00 0.00 1.94
337 338 8.581057 AAGAGAACAATATAATGTAGCACTCG 57.419 34.615 0.00 0.00 32.02 4.18
338 339 7.941919 AGAGAACAATATAATGTAGCACTCGA 58.058 34.615 0.00 0.00 32.02 4.04
339 340 8.414003 AGAGAACAATATAATGTAGCACTCGAA 58.586 33.333 0.00 0.00 32.02 3.71
340 341 9.197694 GAGAACAATATAATGTAGCACTCGAAT 57.802 33.333 0.00 0.00 32.02 3.34
341 342 9.547753 AGAACAATATAATGTAGCACTCGAATT 57.452 29.630 0.00 0.00 32.02 2.17
342 343 9.798885 GAACAATATAATGTAGCACTCGAATTC 57.201 33.333 0.00 0.00 32.02 2.17
343 344 8.887036 ACAATATAATGTAGCACTCGAATTCA 57.113 30.769 6.22 0.00 0.00 2.57
344 345 9.325198 ACAATATAATGTAGCACTCGAATTCAA 57.675 29.630 6.22 0.00 0.00 2.69
347 348 5.940192 AATGTAGCACTCGAATTCAAACA 57.060 34.783 6.22 0.00 0.00 2.83
348 349 4.725556 TGTAGCACTCGAATTCAAACAC 57.274 40.909 6.22 0.00 0.00 3.32
349 350 3.496884 TGTAGCACTCGAATTCAAACACC 59.503 43.478 6.22 0.00 0.00 4.16
350 351 2.851195 AGCACTCGAATTCAAACACCT 58.149 42.857 6.22 0.00 0.00 4.00
351 352 2.549754 AGCACTCGAATTCAAACACCTG 59.450 45.455 6.22 0.00 0.00 4.00
352 353 2.290641 GCACTCGAATTCAAACACCTGT 59.709 45.455 6.22 0.00 0.00 4.00
353 354 3.243068 GCACTCGAATTCAAACACCTGTT 60.243 43.478 6.22 0.00 40.50 3.16
354 355 4.024387 GCACTCGAATTCAAACACCTGTTA 60.024 41.667 6.22 0.00 37.25 2.41
355 356 5.504994 GCACTCGAATTCAAACACCTGTTAA 60.505 40.000 6.22 0.00 37.25 2.01
356 357 6.491394 CACTCGAATTCAAACACCTGTTAAA 58.509 36.000 6.22 0.00 37.25 1.52
357 358 6.970043 CACTCGAATTCAAACACCTGTTAAAA 59.030 34.615 6.22 0.00 37.25 1.52
358 359 6.970613 ACTCGAATTCAAACACCTGTTAAAAC 59.029 34.615 6.22 0.00 37.25 2.43
359 360 6.853720 TCGAATTCAAACACCTGTTAAAACA 58.146 32.000 6.22 0.00 37.25 2.83
374 375 7.846644 TGTTAAAACAGACTTTAAGGTTCGA 57.153 32.000 0.00 0.00 32.74 3.71
375 376 8.266392 TGTTAAAACAGACTTTAAGGTTCGAA 57.734 30.769 0.00 0.00 32.74 3.71
376 377 8.728833 TGTTAAAACAGACTTTAAGGTTCGAAA 58.271 29.630 0.00 0.00 32.74 3.46
377 378 9.558648 GTTAAAACAGACTTTAAGGTTCGAAAA 57.441 29.630 0.00 0.00 32.74 2.29
383 384 8.440833 ACAGACTTTAAGGTTCGAAAATTATCG 58.559 33.333 0.00 0.00 44.04 2.92
403 404 4.327854 CGAGAAGCGAATAAGCAAAACT 57.672 40.909 0.00 0.00 44.57 2.66
404 405 4.712763 CGAGAAGCGAATAAGCAAAACTT 58.287 39.130 0.00 0.00 44.57 2.66
405 406 4.783540 CGAGAAGCGAATAAGCAAAACTTC 59.216 41.667 0.00 0.00 44.57 3.01
406 407 5.389935 CGAGAAGCGAATAAGCAAAACTTCT 60.390 40.000 0.00 0.00 43.63 2.85
407 408 6.183360 CGAGAAGCGAATAAGCAAAACTTCTA 60.183 38.462 0.00 0.00 41.67 2.10
408 409 7.464710 CGAGAAGCGAATAAGCAAAACTTCTAT 60.465 37.037 0.00 0.00 41.67 1.98
409 410 7.467623 AGAAGCGAATAAGCAAAACTTCTATG 58.532 34.615 0.00 0.00 40.28 2.23
410 411 6.743575 AGCGAATAAGCAAAACTTCTATGT 57.256 33.333 0.00 0.00 39.97 2.29
411 412 6.546395 AGCGAATAAGCAAAACTTCTATGTG 58.454 36.000 0.00 0.00 39.97 3.21
412 413 6.371548 AGCGAATAAGCAAAACTTCTATGTGA 59.628 34.615 0.00 0.00 39.97 3.58
413 414 7.066284 AGCGAATAAGCAAAACTTCTATGTGAT 59.934 33.333 0.00 0.00 39.97 3.06
414 415 8.335356 GCGAATAAGCAAAACTTCTATGTGATA 58.665 33.333 0.00 0.00 39.97 2.15
415 416 9.638300 CGAATAAGCAAAACTTCTATGTGATAC 57.362 33.333 0.00 0.00 39.97 2.24
418 419 7.986085 AAGCAAAACTTCTATGTGATACAGT 57.014 32.000 0.00 0.00 30.77 3.55
420 421 9.672673 AAGCAAAACTTCTATGTGATACAGTAT 57.327 29.630 0.00 0.00 30.77 2.12
434 435 9.967346 TGTGATACAGTATATAAGCAGAACTTC 57.033 33.333 0.00 0.00 39.97 3.01
435 436 9.967346 GTGATACAGTATATAAGCAGAACTTCA 57.033 33.333 0.00 0.00 39.97 3.02
440 441 9.726438 ACAGTATATAAGCAGAACTTCAGTTTT 57.274 29.630 0.00 0.00 39.97 2.43
441 442 9.979270 CAGTATATAAGCAGAACTTCAGTTTTG 57.021 33.333 5.97 5.97 41.42 2.44
442 443 9.944376 AGTATATAAGCAGAACTTCAGTTTTGA 57.056 29.630 13.08 0.00 41.12 2.69
443 444 9.974750 GTATATAAGCAGAACTTCAGTTTTGAC 57.025 33.333 13.08 5.76 41.12 3.18
444 445 6.942532 ATAAGCAGAACTTCAGTTTTGACA 57.057 33.333 13.08 0.00 41.12 3.58
445 446 4.889832 AGCAGAACTTCAGTTTTGACAG 57.110 40.909 13.08 0.00 41.12 3.51
446 447 4.265073 AGCAGAACTTCAGTTTTGACAGT 58.735 39.130 13.08 0.00 41.12 3.55
447 448 5.428253 AGCAGAACTTCAGTTTTGACAGTA 58.572 37.500 13.08 0.00 41.12 2.74
448 449 5.525378 AGCAGAACTTCAGTTTTGACAGTAG 59.475 40.000 13.08 0.00 41.12 2.57
449 450 5.277538 GCAGAACTTCAGTTTTGACAGTAGG 60.278 44.000 13.08 0.00 41.12 3.18
450 451 5.817816 CAGAACTTCAGTTTTGACAGTAGGT 59.182 40.000 4.56 0.00 41.12 3.08
451 452 6.018669 CAGAACTTCAGTTTTGACAGTAGGTC 60.019 42.308 4.56 0.00 41.12 3.85
452 453 5.990668 AACTTCAGTTTTGACAGTAGGTCT 58.009 37.500 0.00 0.00 40.27 3.85
453 454 5.817816 AACTTCAGTTTTGACAGTAGGTCTG 59.182 40.000 0.00 0.00 40.27 3.51
454 455 6.351881 AACTTCAGTTTTGACAGTAGGTCTGA 60.352 38.462 1.79 0.00 40.27 3.27
455 456 7.635971 AACTTCAGTTTTGACAGTAGGTCTGAT 60.636 37.037 1.79 0.00 40.27 2.90
460 461 1.490574 GACAGTAGGTCTGATGGCCT 58.509 55.000 3.32 0.00 46.27 5.19
461 462 1.410882 GACAGTAGGTCTGATGGCCTC 59.589 57.143 3.32 0.00 46.27 4.70
462 463 1.007721 ACAGTAGGTCTGATGGCCTCT 59.992 52.381 3.32 0.00 46.27 3.69
463 464 2.114616 CAGTAGGTCTGATGGCCTCTT 58.885 52.381 3.32 0.00 46.27 2.85
464 465 3.300388 CAGTAGGTCTGATGGCCTCTTA 58.700 50.000 3.32 0.00 46.27 2.10
465 466 3.900601 CAGTAGGTCTGATGGCCTCTTAT 59.099 47.826 3.32 0.00 46.27 1.73
466 467 3.900601 AGTAGGTCTGATGGCCTCTTATG 59.099 47.826 3.32 0.00 36.38 1.90
467 468 2.769209 AGGTCTGATGGCCTCTTATGT 58.231 47.619 3.32 0.00 0.00 2.29
468 469 3.928754 AGGTCTGATGGCCTCTTATGTA 58.071 45.455 3.32 0.00 0.00 2.29
469 470 4.298626 AGGTCTGATGGCCTCTTATGTAA 58.701 43.478 3.32 0.00 0.00 2.41
470 471 4.910304 AGGTCTGATGGCCTCTTATGTAAT 59.090 41.667 3.32 0.00 0.00 1.89
471 472 6.084738 AGGTCTGATGGCCTCTTATGTAATA 58.915 40.000 3.32 0.00 0.00 0.98
472 473 6.212388 AGGTCTGATGGCCTCTTATGTAATAG 59.788 42.308 3.32 0.00 0.00 1.73
473 474 6.014156 GGTCTGATGGCCTCTTATGTAATAGT 60.014 42.308 3.32 0.00 0.00 2.12
474 475 6.870965 GTCTGATGGCCTCTTATGTAATAGTG 59.129 42.308 3.32 0.00 0.00 2.74
475 476 6.554982 TCTGATGGCCTCTTATGTAATAGTGT 59.445 38.462 3.32 0.00 0.00 3.55
476 477 7.071196 TCTGATGGCCTCTTATGTAATAGTGTT 59.929 37.037 3.32 0.00 0.00 3.32
477 478 7.217200 TGATGGCCTCTTATGTAATAGTGTTC 58.783 38.462 3.32 0.00 0.00 3.18
478 479 5.925509 TGGCCTCTTATGTAATAGTGTTCC 58.074 41.667 3.32 0.00 0.00 3.62
479 480 4.989168 GGCCTCTTATGTAATAGTGTTCCG 59.011 45.833 0.00 0.00 0.00 4.30
480 481 4.448060 GCCTCTTATGTAATAGTGTTCCGC 59.552 45.833 0.00 0.00 0.00 5.54
481 482 4.989168 CCTCTTATGTAATAGTGTTCCGCC 59.011 45.833 0.00 0.00 0.00 6.13
482 483 5.452776 CCTCTTATGTAATAGTGTTCCGCCA 60.453 44.000 0.00 0.00 0.00 5.69
483 484 6.169557 TCTTATGTAATAGTGTTCCGCCAT 57.830 37.500 0.00 0.00 0.00 4.40
484 485 5.989168 TCTTATGTAATAGTGTTCCGCCATG 59.011 40.000 0.00 0.00 0.00 3.66
485 486 3.620427 TGTAATAGTGTTCCGCCATGT 57.380 42.857 0.00 0.00 0.00 3.21
486 487 3.266636 TGTAATAGTGTTCCGCCATGTG 58.733 45.455 0.00 0.00 0.00 3.21
487 488 2.489938 AATAGTGTTCCGCCATGTGT 57.510 45.000 0.00 0.00 0.00 3.72
488 489 3.620427 AATAGTGTTCCGCCATGTGTA 57.380 42.857 0.00 0.00 0.00 2.90
489 490 3.620427 ATAGTGTTCCGCCATGTGTAA 57.380 42.857 0.00 0.00 0.00 2.41
490 491 1.519408 AGTGTTCCGCCATGTGTAAC 58.481 50.000 0.00 0.00 37.35 2.50
491 492 1.071699 AGTGTTCCGCCATGTGTAACT 59.928 47.619 0.00 0.00 38.04 2.24
492 493 1.196808 GTGTTCCGCCATGTGTAACTG 59.803 52.381 0.00 0.00 38.04 3.16
493 494 0.168128 GTTCCGCCATGTGTAACTGC 59.832 55.000 0.00 0.00 38.04 4.40
494 495 0.036164 TTCCGCCATGTGTAACTGCT 59.964 50.000 0.00 0.00 38.04 4.24
495 496 0.036164 TCCGCCATGTGTAACTGCTT 59.964 50.000 0.00 0.00 38.04 3.91
496 497 0.881118 CCGCCATGTGTAACTGCTTT 59.119 50.000 0.00 0.00 38.04 3.51
497 498 1.269448 CCGCCATGTGTAACTGCTTTT 59.731 47.619 0.00 0.00 38.04 2.27
498 499 2.318578 CGCCATGTGTAACTGCTTTTG 58.681 47.619 0.00 0.00 38.04 2.44
499 500 2.287547 CGCCATGTGTAACTGCTTTTGT 60.288 45.455 0.00 0.00 38.04 2.83
500 501 3.058570 CGCCATGTGTAACTGCTTTTGTA 60.059 43.478 0.00 0.00 38.04 2.41
501 502 4.555708 CGCCATGTGTAACTGCTTTTGTAA 60.556 41.667 0.00 0.00 38.04 2.41
502 503 5.469479 GCCATGTGTAACTGCTTTTGTAAT 58.531 37.500 0.00 0.00 38.04 1.89
503 504 5.345741 GCCATGTGTAACTGCTTTTGTAATG 59.654 40.000 0.00 0.00 38.04 1.90
504 505 6.676950 CCATGTGTAACTGCTTTTGTAATGA 58.323 36.000 0.00 0.00 38.04 2.57
505 506 7.144661 CCATGTGTAACTGCTTTTGTAATGAA 58.855 34.615 0.00 0.00 38.04 2.57
506 507 7.814107 CCATGTGTAACTGCTTTTGTAATGAAT 59.186 33.333 0.00 0.00 38.04 2.57
507 508 8.641155 CATGTGTAACTGCTTTTGTAATGAATG 58.359 33.333 0.00 0.00 38.04 2.67
508 509 7.935520 TGTGTAACTGCTTTTGTAATGAATGA 58.064 30.769 0.00 0.00 38.04 2.57
509 510 8.575589 TGTGTAACTGCTTTTGTAATGAATGAT 58.424 29.630 0.00 0.00 38.04 2.45
510 511 8.853345 GTGTAACTGCTTTTGTAATGAATGATG 58.147 33.333 0.00 0.00 0.00 3.07
511 512 8.575589 TGTAACTGCTTTTGTAATGAATGATGT 58.424 29.630 0.00 0.00 0.00 3.06
514 515 9.630098 AACTGCTTTTGTAATGAATGATGTAAG 57.370 29.630 0.00 0.00 0.00 2.34
515 516 9.013229 ACTGCTTTTGTAATGAATGATGTAAGA 57.987 29.630 0.00 0.00 0.00 2.10
516 517 9.844790 CTGCTTTTGTAATGAATGATGTAAGAA 57.155 29.630 0.00 0.00 0.00 2.52
552 553 9.777008 ACCAAATTAATATAGGAGGGTTTTCAA 57.223 29.630 7.51 0.00 0.00 2.69
579 580 7.511959 AGAAAAAGGACCTCTATGTGAAAAC 57.488 36.000 0.00 0.00 0.00 2.43
582 583 6.884280 AAAGGACCTCTATGTGAAAACTTG 57.116 37.500 0.00 0.00 0.00 3.16
583 584 4.911390 AGGACCTCTATGTGAAAACTTGG 58.089 43.478 0.00 0.00 0.00 3.61
601 602 2.439156 AAAGCGGCATCCAGCTCC 60.439 61.111 1.45 0.00 43.78 4.70
605 606 2.202987 CGGCATCCAGCTCCACTC 60.203 66.667 0.00 0.00 44.79 3.51
611 612 0.042431 ATCCAGCTCCACTCCAGACT 59.958 55.000 0.00 0.00 0.00 3.24
620 621 2.997315 CTCCAGACTCGTGGGCCA 60.997 66.667 0.00 0.00 38.26 5.36
674 685 2.746671 CTGTCCTGCAGGCTGCTG 60.747 66.667 36.50 34.16 45.31 4.41
853 864 3.432588 CGAGACTCGCTCCACCGT 61.433 66.667 12.67 0.00 40.70 4.83
874 885 1.469335 TTCGTCCACACTCTCACCCC 61.469 60.000 0.00 0.00 0.00 4.95
915 926 1.067821 GATCCATCTCGGCGAGAAACT 59.932 52.381 39.24 23.25 42.27 2.66
951 962 1.661341 ATCGCATTTCTCAGGTGAGC 58.339 50.000 1.81 0.00 41.80 4.26
962 973 0.397941 CAGGTGAGCCTCAGGTTTCA 59.602 55.000 0.00 0.00 44.97 2.69
1377 1389 2.537401 GCGTGGATGTACAAGTACCTC 58.463 52.381 0.00 7.37 35.26 3.85
1387 1399 1.303888 AAGTACCTCTCGCACGGGA 60.304 57.895 0.00 0.00 0.00 5.14
1505 1517 4.217159 GGCCCGAACGCCGTAGAT 62.217 66.667 0.00 0.00 39.64 1.98
1507 1519 2.960129 CCCGAACGCCGTAGATGC 60.960 66.667 0.00 0.00 36.31 3.91
1517 1529 1.121240 CCGTAGATGCGTCGTCATTC 58.879 55.000 0.00 0.00 0.00 2.67
1537 1549 0.249911 GCCCTCCTATGCGTTACCAG 60.250 60.000 0.00 0.00 0.00 4.00
1538 1550 1.120530 CCCTCCTATGCGTTACCAGT 58.879 55.000 0.00 0.00 0.00 4.00
1539 1551 1.202533 CCCTCCTATGCGTTACCAGTG 60.203 57.143 0.00 0.00 0.00 3.66
1540 1552 1.480954 CCTCCTATGCGTTACCAGTGT 59.519 52.381 0.00 0.00 0.00 3.55
1541 1553 2.540515 CTCCTATGCGTTACCAGTGTG 58.459 52.381 0.00 0.00 0.00 3.82
1542 1554 1.897133 TCCTATGCGTTACCAGTGTGT 59.103 47.619 0.00 0.00 0.00 3.72
1543 1555 1.999735 CCTATGCGTTACCAGTGTGTG 59.000 52.381 0.00 0.00 0.00 3.82
1544 1556 1.393539 CTATGCGTTACCAGTGTGTGC 59.606 52.381 0.00 0.00 0.00 4.57
1545 1557 1.565156 ATGCGTTACCAGTGTGTGCG 61.565 55.000 0.00 0.00 0.00 5.34
1546 1558 2.241880 GCGTTACCAGTGTGTGCGT 61.242 57.895 0.00 0.00 0.00 5.24
1604 1618 0.457853 CTGCGAGCGGTGCTACTTAA 60.458 55.000 0.00 0.00 39.88 1.85
1753 1784 0.522915 GATTCGGAGTCCACGTCGTC 60.523 60.000 10.49 0.00 0.00 4.20
1768 1799 3.050619 CGTCGTCCATATTACTGCCTTC 58.949 50.000 0.00 0.00 0.00 3.46
1769 1800 3.243434 CGTCGTCCATATTACTGCCTTCT 60.243 47.826 0.00 0.00 0.00 2.85
1770 1801 4.694339 GTCGTCCATATTACTGCCTTCTT 58.306 43.478 0.00 0.00 0.00 2.52
1771 1802 5.116882 GTCGTCCATATTACTGCCTTCTTT 58.883 41.667 0.00 0.00 0.00 2.52
1772 1803 5.585047 GTCGTCCATATTACTGCCTTCTTTT 59.415 40.000 0.00 0.00 0.00 2.27
1773 1804 6.093633 GTCGTCCATATTACTGCCTTCTTTTT 59.906 38.462 0.00 0.00 0.00 1.94
1792 1823 5.890752 TTTTTCGGGGTTAAAAGGGATTT 57.109 34.783 0.00 0.00 34.92 2.17
1793 1824 5.890752 TTTTCGGGGTTAAAAGGGATTTT 57.109 34.783 0.00 0.00 32.27 1.82
1794 1825 5.471556 TTTCGGGGTTAAAAGGGATTTTC 57.528 39.130 0.00 0.00 32.27 2.29
1795 1826 4.115398 TCGGGGTTAAAAGGGATTTTCA 57.885 40.909 0.00 0.00 32.27 2.69
1796 1827 4.679331 TCGGGGTTAAAAGGGATTTTCAT 58.321 39.130 0.00 0.00 32.27 2.57
1797 1828 5.088026 TCGGGGTTAAAAGGGATTTTCATT 58.912 37.500 0.00 0.00 32.27 2.57
1798 1829 5.046950 TCGGGGTTAAAAGGGATTTTCATTG 60.047 40.000 0.00 0.00 32.27 2.82
1799 1830 4.941263 GGGGTTAAAAGGGATTTTCATTGC 59.059 41.667 0.00 0.00 32.27 3.56
1800 1831 5.280470 GGGGTTAAAAGGGATTTTCATTGCT 60.280 40.000 0.00 0.00 32.27 3.91
1801 1832 5.874810 GGGTTAAAAGGGATTTTCATTGCTC 59.125 40.000 0.00 0.00 32.27 4.26
1802 1833 6.463360 GGTTAAAAGGGATTTTCATTGCTCA 58.537 36.000 0.00 0.00 32.27 4.26
1803 1834 6.934083 GGTTAAAAGGGATTTTCATTGCTCAA 59.066 34.615 0.00 0.00 32.27 3.02
1804 1835 7.607607 GGTTAAAAGGGATTTTCATTGCTCAAT 59.392 33.333 0.00 0.00 32.27 2.57
1805 1836 8.445493 GTTAAAAGGGATTTTCATTGCTCAATG 58.555 33.333 14.62 14.62 39.68 2.82
1806 1837 4.748277 AGGGATTTTCATTGCTCAATGG 57.252 40.909 19.04 4.79 46.08 3.16
1807 1838 3.453353 AGGGATTTTCATTGCTCAATGGG 59.547 43.478 19.04 0.00 46.08 4.00
1808 1839 3.432608 GGGATTTTCATTGCTCAATGGGG 60.433 47.826 19.04 0.00 46.08 4.96
1809 1840 3.451902 GGATTTTCATTGCTCAATGGGGA 59.548 43.478 19.04 8.31 46.08 4.81
1810 1841 4.080975 GGATTTTCATTGCTCAATGGGGAA 60.081 41.667 19.04 12.78 46.08 3.97
1811 1842 3.959535 TTTCATTGCTCAATGGGGAAC 57.040 42.857 19.04 0.00 46.08 3.62
1825 1856 3.754766 GGAACCAGGTCGTCCATAC 57.245 57.895 5.51 0.00 35.89 2.39
1826 1857 0.899720 GGAACCAGGTCGTCCATACA 59.100 55.000 5.51 0.00 35.89 2.29
1827 1858 1.276989 GGAACCAGGTCGTCCATACAA 59.723 52.381 5.51 0.00 35.89 2.41
1828 1859 2.289819 GGAACCAGGTCGTCCATACAAA 60.290 50.000 5.51 0.00 35.89 2.83
1829 1860 2.762535 ACCAGGTCGTCCATACAAAG 57.237 50.000 0.51 0.00 35.89 2.77
1830 1861 1.975680 ACCAGGTCGTCCATACAAAGT 59.024 47.619 0.51 0.00 35.89 2.66
1831 1862 2.370849 ACCAGGTCGTCCATACAAAGTT 59.629 45.455 0.51 0.00 35.89 2.66
1832 1863 2.742053 CCAGGTCGTCCATACAAAGTTG 59.258 50.000 0.51 0.00 35.89 3.16
1833 1864 2.742053 CAGGTCGTCCATACAAAGTTGG 59.258 50.000 0.51 0.00 35.89 3.77
1834 1865 2.081462 GGTCGTCCATACAAAGTTGGG 58.919 52.381 0.00 0.00 33.62 4.12
1835 1866 2.081462 GTCGTCCATACAAAGTTGGGG 58.919 52.381 0.00 0.00 33.62 4.96
1836 1867 1.700739 TCGTCCATACAAAGTTGGGGT 59.299 47.619 0.00 0.00 33.62 4.95
1837 1868 2.905085 TCGTCCATACAAAGTTGGGGTA 59.095 45.455 0.00 0.00 33.62 3.69
1838 1869 3.004862 CGTCCATACAAAGTTGGGGTAC 58.995 50.000 0.00 0.00 33.62 3.34
1839 1870 3.557475 CGTCCATACAAAGTTGGGGTACA 60.557 47.826 0.00 0.00 33.62 2.90
1840 1871 4.595986 GTCCATACAAAGTTGGGGTACAT 58.404 43.478 0.00 0.00 33.62 2.29
1841 1872 4.638865 GTCCATACAAAGTTGGGGTACATC 59.361 45.833 0.00 0.00 33.62 3.06
1842 1873 3.951680 CCATACAAAGTTGGGGTACATCC 59.048 47.826 0.00 0.00 0.00 3.51
1843 1874 2.194201 ACAAAGTTGGGGTACATCCG 57.806 50.000 0.00 0.00 37.00 4.18
1844 1875 1.422402 ACAAAGTTGGGGTACATCCGT 59.578 47.619 0.00 0.00 37.00 4.69
1845 1876 2.638855 ACAAAGTTGGGGTACATCCGTA 59.361 45.455 0.00 0.00 37.00 4.02
1846 1877 3.267483 CAAAGTTGGGGTACATCCGTAG 58.733 50.000 0.00 0.00 37.00 3.51
1860 1891 3.065575 CGTAGGGCATGACCTCAAC 57.934 57.895 27.73 17.64 42.09 3.18
1861 1892 0.462047 CGTAGGGCATGACCTCAACC 60.462 60.000 27.73 9.96 42.09 3.77
1862 1893 0.618458 GTAGGGCATGACCTCAACCA 59.382 55.000 27.73 2.07 42.09 3.67
1863 1894 1.004277 GTAGGGCATGACCTCAACCAA 59.996 52.381 27.73 1.09 42.09 3.67
1864 1895 0.482446 AGGGCATGACCTCAACCAAA 59.518 50.000 16.83 0.00 35.43 3.28
1865 1896 0.603065 GGGCATGACCTCAACCAAAC 59.397 55.000 11.56 0.00 39.10 2.93
1866 1897 1.620822 GGCATGACCTCAACCAAACT 58.379 50.000 0.00 0.00 34.51 2.66
1867 1898 1.270550 GGCATGACCTCAACCAAACTG 59.729 52.381 0.00 0.00 34.51 3.16
1868 1899 1.336240 GCATGACCTCAACCAAACTGC 60.336 52.381 0.00 0.00 0.00 4.40
1869 1900 1.955778 CATGACCTCAACCAAACTGCA 59.044 47.619 0.00 0.00 0.00 4.41
1870 1901 1.679139 TGACCTCAACCAAACTGCAG 58.321 50.000 13.48 13.48 0.00 4.41
1871 1902 1.064758 TGACCTCAACCAAACTGCAGT 60.065 47.619 15.25 15.25 0.00 4.40
1872 1903 1.604278 GACCTCAACCAAACTGCAGTC 59.396 52.381 21.95 0.00 0.00 3.51
1873 1904 0.954452 CCTCAACCAAACTGCAGTCC 59.046 55.000 21.95 0.00 0.00 3.85
1874 1905 1.477558 CCTCAACCAAACTGCAGTCCT 60.478 52.381 21.95 7.79 0.00 3.85
1875 1906 2.224523 CCTCAACCAAACTGCAGTCCTA 60.225 50.000 21.95 0.98 0.00 2.94
1876 1907 3.070018 CTCAACCAAACTGCAGTCCTAG 58.930 50.000 21.95 11.90 0.00 3.02
1877 1908 1.537202 CAACCAAACTGCAGTCCTAGC 59.463 52.381 21.95 0.00 0.00 3.42
1878 1909 0.036875 ACCAAACTGCAGTCCTAGCC 59.963 55.000 21.95 0.00 0.00 3.93
1879 1910 0.326264 CCAAACTGCAGTCCTAGCCT 59.674 55.000 21.95 0.00 0.00 4.58
1880 1911 1.677217 CCAAACTGCAGTCCTAGCCTC 60.677 57.143 21.95 0.00 0.00 4.70
1881 1912 1.277557 CAAACTGCAGTCCTAGCCTCT 59.722 52.381 21.95 0.00 0.00 3.69
1882 1913 2.497675 CAAACTGCAGTCCTAGCCTCTA 59.502 50.000 21.95 0.00 0.00 2.43
1883 1914 1.770294 ACTGCAGTCCTAGCCTCTAC 58.230 55.000 15.25 0.00 0.00 2.59
1884 1915 0.665835 CTGCAGTCCTAGCCTCTACG 59.334 60.000 5.25 0.00 0.00 3.51
1885 1916 1.360911 GCAGTCCTAGCCTCTACGC 59.639 63.158 0.00 0.00 0.00 4.42
1886 1917 1.649815 CAGTCCTAGCCTCTACGCG 59.350 63.158 3.53 3.53 0.00 6.01
1887 1918 1.526455 AGTCCTAGCCTCTACGCGG 60.526 63.158 12.47 0.00 0.00 6.46
1888 1919 1.525535 GTCCTAGCCTCTACGCGGA 60.526 63.158 12.47 0.00 0.00 5.54
1889 1920 1.525535 TCCTAGCCTCTACGCGGAC 60.526 63.158 12.47 0.00 0.00 4.79
1891 1922 2.894565 CTAGCCTCTACGCGGACGG 61.895 68.421 12.47 3.96 46.04 4.79
1895 1926 4.124351 CTCTACGCGGACGGCCAA 62.124 66.667 8.76 0.00 46.04 4.52
1896 1927 3.636313 CTCTACGCGGACGGCCAAA 62.636 63.158 8.76 0.00 46.04 3.28
1897 1928 3.484547 CTACGCGGACGGCCAAAC 61.485 66.667 8.76 0.00 46.04 2.93
1913 1944 4.795970 CCAAACGTGGCTAATCTATGAC 57.204 45.455 0.00 0.00 38.35 3.06
1914 1945 4.442706 CCAAACGTGGCTAATCTATGACT 58.557 43.478 0.00 0.00 38.35 3.41
1915 1946 5.597806 CCAAACGTGGCTAATCTATGACTA 58.402 41.667 0.00 0.00 38.35 2.59
1916 1947 6.046593 CCAAACGTGGCTAATCTATGACTAA 58.953 40.000 0.00 0.00 38.35 2.24
1917 1948 6.018994 CCAAACGTGGCTAATCTATGACTAAC 60.019 42.308 0.00 0.00 38.35 2.34
1918 1949 5.847111 ACGTGGCTAATCTATGACTAACA 57.153 39.130 0.00 0.00 0.00 2.41
1919 1950 5.833082 ACGTGGCTAATCTATGACTAACAG 58.167 41.667 0.00 0.00 0.00 3.16
1920 1951 5.593095 ACGTGGCTAATCTATGACTAACAGA 59.407 40.000 0.00 0.00 0.00 3.41
1921 1952 6.096423 ACGTGGCTAATCTATGACTAACAGAA 59.904 38.462 0.00 0.00 0.00 3.02
1922 1953 7.148641 CGTGGCTAATCTATGACTAACAGAAT 58.851 38.462 0.00 0.00 0.00 2.40
1923 1954 7.653713 CGTGGCTAATCTATGACTAACAGAATT 59.346 37.037 0.00 0.00 0.00 2.17
1924 1955 9.331282 GTGGCTAATCTATGACTAACAGAATTT 57.669 33.333 0.00 0.00 0.00 1.82
1925 1956 9.905713 TGGCTAATCTATGACTAACAGAATTTT 57.094 29.630 0.00 0.00 0.00 1.82
1935 1966 9.965902 ATGACTAACAGAATTTTGATTCCTACT 57.034 29.630 2.48 0.00 0.00 2.57
1942 1973 9.739276 ACAGAATTTTGATTCCTACTAATGTGA 57.261 29.630 2.48 0.00 0.00 3.58
1944 1975 8.897752 AGAATTTTGATTCCTACTAATGTGAGC 58.102 33.333 0.00 0.00 0.00 4.26
1945 1976 8.579850 AATTTTGATTCCTACTAATGTGAGCA 57.420 30.769 0.00 0.00 0.00 4.26
1946 1977 7.994425 TTTTGATTCCTACTAATGTGAGCAA 57.006 32.000 0.00 0.00 0.00 3.91
1947 1978 8.579850 TTTTGATTCCTACTAATGTGAGCAAT 57.420 30.769 0.00 0.00 0.00 3.56
1948 1979 9.679661 TTTTGATTCCTACTAATGTGAGCAATA 57.320 29.630 0.00 0.00 0.00 1.90
1949 1980 8.893219 TTGATTCCTACTAATGTGAGCAATAG 57.107 34.615 0.00 0.00 34.96 1.73
1950 1981 8.250143 TGATTCCTACTAATGTGAGCAATAGA 57.750 34.615 0.00 0.00 33.48 1.98
1951 1982 8.363390 TGATTCCTACTAATGTGAGCAATAGAG 58.637 37.037 0.00 0.00 33.48 2.43
1952 1983 6.090483 TCCTACTAATGTGAGCAATAGAGC 57.910 41.667 0.00 0.00 33.48 4.09
1954 1985 7.004691 TCCTACTAATGTGAGCAATAGAGCTA 58.995 38.462 0.00 0.00 46.75 3.32
1955 1986 7.671819 TCCTACTAATGTGAGCAATAGAGCTAT 59.328 37.037 0.00 0.00 46.75 2.97
1956 1987 7.973388 CCTACTAATGTGAGCAATAGAGCTATC 59.027 40.741 0.00 0.00 46.75 2.08
1957 1988 6.696411 ACTAATGTGAGCAATAGAGCTATCC 58.304 40.000 0.00 0.00 46.75 2.59
1958 1989 4.550076 ATGTGAGCAATAGAGCTATCCC 57.450 45.455 0.00 0.00 46.75 3.85
1959 1990 3.581101 TGTGAGCAATAGAGCTATCCCT 58.419 45.455 0.00 0.00 46.75 4.20
1960 1991 3.969976 TGTGAGCAATAGAGCTATCCCTT 59.030 43.478 0.00 0.00 46.75 3.95
1961 1992 4.410228 TGTGAGCAATAGAGCTATCCCTTT 59.590 41.667 0.00 0.00 46.75 3.11
1962 1993 4.994217 GTGAGCAATAGAGCTATCCCTTTC 59.006 45.833 0.00 0.00 46.75 2.62
1963 1994 4.655649 TGAGCAATAGAGCTATCCCTTTCA 59.344 41.667 0.00 0.00 46.75 2.69
1964 1995 4.967036 AGCAATAGAGCTATCCCTTTCAC 58.033 43.478 0.00 0.00 44.50 3.18
1965 1996 3.743396 GCAATAGAGCTATCCCTTTCACG 59.257 47.826 0.00 0.00 0.00 4.35
1966 1997 4.740934 GCAATAGAGCTATCCCTTTCACGT 60.741 45.833 0.00 0.00 0.00 4.49
1967 1998 5.509163 GCAATAGAGCTATCCCTTTCACGTA 60.509 44.000 0.00 0.00 0.00 3.57
1968 1999 5.968528 ATAGAGCTATCCCTTTCACGTAG 57.031 43.478 0.00 0.00 0.00 3.51
1969 2000 2.959707 AGAGCTATCCCTTTCACGTAGG 59.040 50.000 0.00 0.00 0.00 3.18
1970 2001 2.957006 GAGCTATCCCTTTCACGTAGGA 59.043 50.000 4.34 0.00 34.56 2.94
1995 2026 2.057316 CTCGATTCCTTCTATGCTGCG 58.943 52.381 0.00 0.00 0.00 5.18
2000 2031 1.045350 TCCTTCTATGCTGCGGCTCT 61.045 55.000 20.27 8.75 39.59 4.09
2006 2037 2.365293 TCTATGCTGCGGCTCTAATTCA 59.635 45.455 20.27 0.00 39.59 2.57
2017 2048 4.938226 CGGCTCTAATTCATAAATCCCTCC 59.062 45.833 0.00 0.00 0.00 4.30
2043 2075 6.316890 TCTGTTCTTAAACTGTTTTAACGCCT 59.683 34.615 11.48 0.00 34.21 5.52
2044 2076 7.495279 TCTGTTCTTAAACTGTTTTAACGCCTA 59.505 33.333 11.48 0.00 34.21 3.93
2058 2091 3.559238 ACGCCTAAACAATTGCTTGAG 57.441 42.857 5.05 2.17 36.20 3.02
2064 2097 2.405892 AACAATTGCTTGAGTCGCAC 57.594 45.000 5.05 0.00 37.07 5.34
2084 2117 5.984926 CGCACCCTGAAATTGCATATTATTT 59.015 36.000 0.00 0.00 35.93 1.40
2085 2118 6.144402 CGCACCCTGAAATTGCATATTATTTC 59.856 38.462 12.62 12.62 39.86 2.17
2101 2134 9.553064 CATATTATTTCTGCTACCTTCAGTTCT 57.447 33.333 0.00 0.00 33.48 3.01
2172 2419 9.204570 ACTCGAACATATATTTTGGTATAGCAC 57.795 33.333 3.60 0.00 0.00 4.40
2204 2455 3.480679 CTGCCCTGACAGTGGTGCA 62.481 63.158 0.93 4.17 32.78 4.57
2206 2457 2.831770 CCCTGACAGTGGTGCAGT 59.168 61.111 0.93 0.00 0.00 4.40
2207 2458 1.302033 CCCTGACAGTGGTGCAGTC 60.302 63.158 0.93 0.00 34.64 3.51
2209 2460 0.602106 CCTGACAGTGGTGCAGTCTG 60.602 60.000 0.93 10.04 35.05 3.51
2210 2461 1.226686 CTGACAGTGGTGCAGTCTGC 61.227 60.000 18.32 18.32 45.29 4.26
2211 2462 1.070445 GACAGTGGTGCAGTCTGCT 59.930 57.895 24.76 3.19 45.31 4.24
2212 2463 0.948141 GACAGTGGTGCAGTCTGCTC 60.948 60.000 24.76 20.69 45.31 4.26
2246 2497 2.106338 TCTGTGGAGTTCATTTCTGCCA 59.894 45.455 0.00 0.00 0.00 4.92
2254 2505 4.526970 AGTTCATTTCTGCCATTCCGTAT 58.473 39.130 0.00 0.00 0.00 3.06
2286 2537 0.623723 GCCATTTCTGTCCCCTACCA 59.376 55.000 0.00 0.00 0.00 3.25
2295 2546 0.981183 GTCCCCTACCACACACATGA 59.019 55.000 0.00 0.00 0.00 3.07
2304 2555 1.395954 CCACACACATGAATCTCAGCG 59.604 52.381 0.00 0.00 0.00 5.18
2365 2621 9.539825 AATGTAAACATGAACAGTAAAATGCAA 57.460 25.926 0.00 0.00 36.56 4.08
2463 2719 7.703298 CATTGTTGAATGTTTCACATGTCTT 57.297 32.000 0.00 0.00 37.97 3.01
2472 2728 9.462174 GAATGTTTCACATGTCTTCATTGTTTA 57.538 29.630 15.14 0.00 37.97 2.01
2473 2729 9.467258 AATGTTTCACATGTCTTCATTGTTTAG 57.533 29.630 0.00 0.00 37.97 1.85
2474 2730 7.995289 TGTTTCACATGTCTTCATTGTTTAGT 58.005 30.769 0.00 0.00 31.15 2.24
2476 2732 8.958043 GTTTCACATGTCTTCATTGTTTAGTTC 58.042 33.333 0.00 0.00 31.15 3.01
2479 2735 4.742438 TGTCTTCATTGTTTAGTTCGGC 57.258 40.909 0.00 0.00 0.00 5.54
2483 2739 3.552604 TCATTGTTTAGTTCGGCAAGC 57.447 42.857 0.00 0.00 0.00 4.01
2485 2741 1.584175 TTGTTTAGTTCGGCAAGCGA 58.416 45.000 0.00 0.00 0.00 4.93
2503 2759 4.433615 AGCGAAAATCGATGCTCTAAAGA 58.566 39.130 0.00 0.00 43.74 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.330466 ACCTTATTTTTAACATGACGTCATCA 57.670 30.769 27.79 13.33 43.13 3.07
37 38 9.310449 GGGAAATAGTATCTTATCTAGGTGTGA 57.690 37.037 0.00 0.00 0.00 3.58
38 39 9.090103 TGGGAAATAGTATCTTATCTAGGTGTG 57.910 37.037 0.00 0.00 0.00 3.82
39 40 9.845214 ATGGGAAATAGTATCTTATCTAGGTGT 57.155 33.333 0.00 0.00 0.00 4.16
61 62 7.448420 ACTATTTCACATCACATCTAGATGGG 58.552 38.462 31.19 28.93 45.95 4.00
62 63 8.899427 AACTATTTCACATCACATCTAGATGG 57.101 34.615 31.19 21.37 45.49 3.51
68 69 9.539825 GTGAGATAACTATTTCACATCACATCT 57.460 33.333 12.98 0.00 43.42 2.90
69 70 9.317936 TGTGAGATAACTATTTCACATCACATC 57.682 33.333 15.47 0.00 46.42 3.06
83 84 9.853177 TGATGAGACTTAGATGTGAGATAACTA 57.147 33.333 0.00 0.00 0.00 2.24
84 85 8.629158 GTGATGAGACTTAGATGTGAGATAACT 58.371 37.037 0.00 0.00 0.00 2.24
85 86 8.409371 TGTGATGAGACTTAGATGTGAGATAAC 58.591 37.037 0.00 0.00 0.00 1.89
86 87 8.525290 TGTGATGAGACTTAGATGTGAGATAA 57.475 34.615 0.00 0.00 0.00 1.75
87 88 8.574737 CATGTGATGAGACTTAGATGTGAGATA 58.425 37.037 0.00 0.00 0.00 1.98
88 89 7.287235 TCATGTGATGAGACTTAGATGTGAGAT 59.713 37.037 0.00 0.00 33.59 2.75
89 90 6.604795 TCATGTGATGAGACTTAGATGTGAGA 59.395 38.462 0.00 0.00 33.59 3.27
90 91 6.803642 TCATGTGATGAGACTTAGATGTGAG 58.196 40.000 0.00 0.00 33.59 3.51
91 92 6.780457 TCATGTGATGAGACTTAGATGTGA 57.220 37.500 0.00 0.00 33.59 3.58
92 93 7.208080 TGATCATGTGATGAGACTTAGATGTG 58.792 38.462 0.00 0.00 43.53 3.21
93 94 7.357429 TGATCATGTGATGAGACTTAGATGT 57.643 36.000 0.00 0.00 43.53 3.06
94 95 7.385478 CCTTGATCATGTGATGAGACTTAGATG 59.615 40.741 0.00 0.00 43.53 2.90
95 96 7.443477 CCTTGATCATGTGATGAGACTTAGAT 58.557 38.462 0.00 0.00 43.53 1.98
96 97 6.684865 GCCTTGATCATGTGATGAGACTTAGA 60.685 42.308 0.00 0.00 43.53 2.10
97 98 5.466058 GCCTTGATCATGTGATGAGACTTAG 59.534 44.000 0.00 0.00 43.53 2.18
98 99 5.129980 AGCCTTGATCATGTGATGAGACTTA 59.870 40.000 0.00 0.00 43.53 2.24
99 100 4.080469 AGCCTTGATCATGTGATGAGACTT 60.080 41.667 0.00 0.00 43.53 3.01
100 101 3.455177 AGCCTTGATCATGTGATGAGACT 59.545 43.478 0.00 0.00 43.53 3.24
101 102 3.560481 CAGCCTTGATCATGTGATGAGAC 59.440 47.826 0.00 0.00 43.53 3.36
102 103 3.199289 ACAGCCTTGATCATGTGATGAGA 59.801 43.478 16.55 0.00 43.53 3.27
103 104 3.542648 ACAGCCTTGATCATGTGATGAG 58.457 45.455 16.55 2.82 43.53 2.90
104 105 3.639672 ACAGCCTTGATCATGTGATGA 57.360 42.857 16.55 0.00 44.55 2.92
105 106 6.387041 AATTACAGCCTTGATCATGTGATG 57.613 37.500 9.45 10.47 34.37 3.07
106 107 7.093640 ACAAAATTACAGCCTTGATCATGTGAT 60.094 33.333 9.45 4.65 37.51 3.06
107 108 6.209192 ACAAAATTACAGCCTTGATCATGTGA 59.791 34.615 9.45 2.56 0.00 3.58
108 109 6.309494 CACAAAATTACAGCCTTGATCATGTG 59.691 38.462 9.45 6.43 0.00 3.21
109 110 6.392354 CACAAAATTACAGCCTTGATCATGT 58.608 36.000 0.00 0.00 0.00 3.21
110 111 5.290158 GCACAAAATTACAGCCTTGATCATG 59.710 40.000 0.00 0.00 0.00 3.07
111 112 5.047164 TGCACAAAATTACAGCCTTGATCAT 60.047 36.000 0.00 0.00 0.00 2.45
112 113 4.280425 TGCACAAAATTACAGCCTTGATCA 59.720 37.500 0.00 0.00 0.00 2.92
113 114 4.808558 TGCACAAAATTACAGCCTTGATC 58.191 39.130 0.00 0.00 0.00 2.92
114 115 4.870123 TGCACAAAATTACAGCCTTGAT 57.130 36.364 0.00 0.00 0.00 2.57
115 116 4.662468 TTGCACAAAATTACAGCCTTGA 57.338 36.364 0.00 0.00 0.00 3.02
116 117 5.927954 ATTTGCACAAAATTACAGCCTTG 57.072 34.783 0.00 0.00 34.72 3.61
117 118 6.940831 AAATTTGCACAAAATTACAGCCTT 57.059 29.167 0.00 0.00 45.73 4.35
118 119 6.318396 ACAAAATTTGCACAAAATTACAGCCT 59.682 30.769 5.52 0.00 45.73 4.58
119 120 6.493978 ACAAAATTTGCACAAAATTACAGCC 58.506 32.000 5.52 0.00 45.73 4.85
120 121 7.967771 AACAAAATTTGCACAAAATTACAGC 57.032 28.000 5.52 0.00 45.73 4.40
126 127 8.567104 GGGATTCTAACAAAATTTGCACAAAAT 58.433 29.630 5.52 0.39 40.32 1.82
127 128 7.254590 CGGGATTCTAACAAAATTTGCACAAAA 60.255 33.333 5.52 0.00 33.56 2.44
128 129 6.201806 CGGGATTCTAACAAAATTTGCACAAA 59.798 34.615 5.52 0.00 34.46 2.83
129 130 5.694006 CGGGATTCTAACAAAATTTGCACAA 59.306 36.000 5.52 0.00 0.00 3.33
130 131 5.010112 TCGGGATTCTAACAAAATTTGCACA 59.990 36.000 5.52 0.00 0.00 4.57
131 132 5.465935 TCGGGATTCTAACAAAATTTGCAC 58.534 37.500 5.52 0.00 0.00 4.57
132 133 5.713792 TCGGGATTCTAACAAAATTTGCA 57.286 34.783 5.52 0.00 0.00 4.08
133 134 6.422400 TGTTTCGGGATTCTAACAAAATTTGC 59.578 34.615 5.52 0.00 0.00 3.68
134 135 7.359181 GCTGTTTCGGGATTCTAACAAAATTTG 60.359 37.037 3.89 3.89 30.87 2.32
135 136 6.645003 GCTGTTTCGGGATTCTAACAAAATTT 59.355 34.615 0.00 0.00 30.87 1.82
136 137 6.156519 GCTGTTTCGGGATTCTAACAAAATT 58.843 36.000 0.00 0.00 30.87 1.82
137 138 5.242838 TGCTGTTTCGGGATTCTAACAAAAT 59.757 36.000 0.00 0.00 30.87 1.82
138 139 4.580995 TGCTGTTTCGGGATTCTAACAAAA 59.419 37.500 0.00 0.00 30.87 2.44
139 140 4.138290 TGCTGTTTCGGGATTCTAACAAA 58.862 39.130 0.00 0.00 30.87 2.83
140 141 3.745799 TGCTGTTTCGGGATTCTAACAA 58.254 40.909 0.00 0.00 30.87 2.83
141 142 3.334691 CTGCTGTTTCGGGATTCTAACA 58.665 45.455 0.00 0.00 0.00 2.41
142 143 2.096013 GCTGCTGTTTCGGGATTCTAAC 59.904 50.000 0.00 0.00 0.00 2.34
143 144 2.356135 GCTGCTGTTTCGGGATTCTAA 58.644 47.619 0.00 0.00 0.00 2.10
144 145 1.406887 GGCTGCTGTTTCGGGATTCTA 60.407 52.381 0.00 0.00 0.00 2.10
145 146 0.678048 GGCTGCTGTTTCGGGATTCT 60.678 55.000 0.00 0.00 0.00 2.40
146 147 0.960364 TGGCTGCTGTTTCGGGATTC 60.960 55.000 0.00 0.00 0.00 2.52
147 148 0.539438 TTGGCTGCTGTTTCGGGATT 60.539 50.000 0.00 0.00 0.00 3.01
148 149 1.074775 TTGGCTGCTGTTTCGGGAT 59.925 52.632 0.00 0.00 0.00 3.85
149 150 1.896660 GTTGGCTGCTGTTTCGGGA 60.897 57.895 0.00 0.00 0.00 5.14
150 151 2.644992 GTTGGCTGCTGTTTCGGG 59.355 61.111 0.00 0.00 0.00 5.14
151 152 2.252260 CGTTGGCTGCTGTTTCGG 59.748 61.111 0.00 0.00 0.00 4.30
152 153 2.427410 GCGTTGGCTGCTGTTTCG 60.427 61.111 0.00 0.00 35.83 3.46
153 154 2.050077 GGCGTTGGCTGCTGTTTC 60.050 61.111 0.00 0.00 39.81 2.78
154 155 3.964875 CGGCGTTGGCTGCTGTTT 61.965 61.111 0.00 0.00 39.01 2.83
155 156 4.927782 TCGGCGTTGGCTGCTGTT 62.928 61.111 6.85 0.00 45.50 3.16
161 162 2.358247 AAATCGTCGGCGTTGGCT 60.358 55.556 10.18 0.00 39.81 4.75
162 163 2.097728 GAAATCGTCGGCGTTGGC 59.902 61.111 10.18 0.00 39.49 4.52
163 164 2.394136 CGAAATCGTCGGCGTTGG 59.606 61.111 10.18 0.00 46.45 3.77
171 172 0.108804 TGACTGCTCCCGAAATCGTC 60.109 55.000 1.79 0.00 37.74 4.20
172 173 0.389948 GTGACTGCTCCCGAAATCGT 60.390 55.000 1.79 0.00 37.74 3.73
173 174 1.413767 CGTGACTGCTCCCGAAATCG 61.414 60.000 0.00 0.00 39.44 3.34
174 175 0.389948 ACGTGACTGCTCCCGAAATC 60.390 55.000 0.00 0.00 0.00 2.17
175 176 0.389948 GACGTGACTGCTCCCGAAAT 60.390 55.000 0.00 0.00 0.00 2.17
176 177 1.006571 GACGTGACTGCTCCCGAAA 60.007 57.895 0.00 0.00 0.00 3.46
177 178 2.649034 GACGTGACTGCTCCCGAA 59.351 61.111 0.00 0.00 0.00 4.30
178 179 3.371063 GGACGTGACTGCTCCCGA 61.371 66.667 0.00 0.00 0.00 5.14
179 180 3.680786 TGGACGTGACTGCTCCCG 61.681 66.667 0.00 0.00 0.00 5.14
180 181 2.048127 GTGGACGTGACTGCTCCC 60.048 66.667 0.00 0.00 0.00 4.30
181 182 0.249911 AAAGTGGACGTGACTGCTCC 60.250 55.000 0.00 0.00 0.00 4.70
182 183 1.527311 GAAAAGTGGACGTGACTGCTC 59.473 52.381 0.00 0.00 0.00 4.26
183 184 1.139058 AGAAAAGTGGACGTGACTGCT 59.861 47.619 0.00 0.00 0.00 4.24
184 185 1.527311 GAGAAAAGTGGACGTGACTGC 59.473 52.381 0.00 0.00 0.00 4.40
185 186 3.099267 AGAGAAAAGTGGACGTGACTG 57.901 47.619 0.00 0.00 0.00 3.51
186 187 4.341520 AGTTAGAGAAAAGTGGACGTGACT 59.658 41.667 0.00 0.00 0.00 3.41
187 188 4.618965 AGTTAGAGAAAAGTGGACGTGAC 58.381 43.478 0.00 0.00 0.00 3.67
188 189 4.931661 AGTTAGAGAAAAGTGGACGTGA 57.068 40.909 0.00 0.00 0.00 4.35
189 190 7.653767 ATTAAGTTAGAGAAAAGTGGACGTG 57.346 36.000 0.00 0.00 0.00 4.49
190 191 8.672823 AAATTAAGTTAGAGAAAAGTGGACGT 57.327 30.769 0.00 0.00 0.00 4.34
204 205 9.939802 ACACCTGTAAGTCCTAAATTAAGTTAG 57.060 33.333 14.33 14.33 0.00 2.34
210 211 9.880157 GTTGATACACCTGTAAGTCCTAAATTA 57.120 33.333 0.00 0.00 33.76 1.40
211 212 8.603304 AGTTGATACACCTGTAAGTCCTAAATT 58.397 33.333 0.00 0.00 33.76 1.82
212 213 8.147244 AGTTGATACACCTGTAAGTCCTAAAT 57.853 34.615 0.00 0.00 33.76 1.40
213 214 7.549147 AGTTGATACACCTGTAAGTCCTAAA 57.451 36.000 0.00 0.00 33.76 1.85
214 215 7.549147 AAGTTGATACACCTGTAAGTCCTAA 57.451 36.000 0.00 0.00 33.76 2.69
215 216 7.670979 TGTAAGTTGATACACCTGTAAGTCCTA 59.329 37.037 0.00 0.00 33.76 2.94
216 217 6.495872 TGTAAGTTGATACACCTGTAAGTCCT 59.504 38.462 0.00 0.00 33.76 3.85
217 218 6.694447 TGTAAGTTGATACACCTGTAAGTCC 58.306 40.000 0.00 0.00 33.76 3.85
218 219 7.331193 CCTTGTAAGTTGATACACCTGTAAGTC 59.669 40.741 0.00 0.00 35.60 3.01
219 220 7.159372 CCTTGTAAGTTGATACACCTGTAAGT 58.841 38.462 0.00 0.00 35.60 2.24
220 221 6.092259 GCCTTGTAAGTTGATACACCTGTAAG 59.908 42.308 0.00 0.00 35.60 2.34
221 222 5.935789 GCCTTGTAAGTTGATACACCTGTAA 59.064 40.000 0.00 0.00 35.60 2.41
222 223 5.247564 AGCCTTGTAAGTTGATACACCTGTA 59.752 40.000 0.00 0.00 35.60 2.74
223 224 4.041691 AGCCTTGTAAGTTGATACACCTGT 59.958 41.667 0.00 0.00 35.60 4.00
224 225 4.579869 AGCCTTGTAAGTTGATACACCTG 58.420 43.478 0.00 0.00 35.60 4.00
225 226 4.910458 AGCCTTGTAAGTTGATACACCT 57.090 40.909 0.00 0.00 35.60 4.00
226 227 4.874396 GGTAGCCTTGTAAGTTGATACACC 59.126 45.833 0.00 0.00 35.60 4.16
227 228 4.874396 GGGTAGCCTTGTAAGTTGATACAC 59.126 45.833 2.95 0.00 35.60 2.90
228 229 4.781087 AGGGTAGCCTTGTAAGTTGATACA 59.219 41.667 7.93 0.00 34.09 2.29
229 230 5.354842 AGGGTAGCCTTGTAAGTTGATAC 57.645 43.478 7.93 0.00 0.00 2.24
230 231 7.499200 TTAAGGGTAGCCTTGTAAGTTGATA 57.501 36.000 31.84 8.74 0.00 2.15
231 232 4.929146 AAGGGTAGCCTTGTAAGTTGAT 57.071 40.909 25.15 0.00 0.00 2.57
232 233 5.829062 TTAAGGGTAGCCTTGTAAGTTGA 57.171 39.130 31.84 10.17 0.00 3.18
233 234 7.462571 AATTTAAGGGTAGCCTTGTAAGTTG 57.537 36.000 31.84 0.00 0.00 3.16
234 235 8.165397 TGTAATTTAAGGGTAGCCTTGTAAGTT 58.835 33.333 31.84 23.08 0.00 2.66
235 236 7.692172 TGTAATTTAAGGGTAGCCTTGTAAGT 58.308 34.615 31.84 24.86 0.00 2.24
236 237 8.570068 TTGTAATTTAAGGGTAGCCTTGTAAG 57.430 34.615 31.84 0.00 0.00 2.34
237 238 7.612633 CCTTGTAATTTAAGGGTAGCCTTGTAA 59.387 37.037 31.84 24.74 40.79 2.41
238 239 7.114095 CCTTGTAATTTAAGGGTAGCCTTGTA 58.886 38.462 31.84 20.73 40.79 2.41
239 240 5.949952 CCTTGTAATTTAAGGGTAGCCTTGT 59.050 40.000 31.84 17.00 40.79 3.16
240 241 5.163550 GCCTTGTAATTTAAGGGTAGCCTTG 60.164 44.000 31.84 14.60 43.90 3.61
241 242 4.954202 GCCTTGTAATTTAAGGGTAGCCTT 59.046 41.667 28.15 28.15 43.90 4.35
242 243 4.533815 GCCTTGTAATTTAAGGGTAGCCT 58.466 43.478 7.93 7.93 43.90 4.58
243 244 4.913335 GCCTTGTAATTTAAGGGTAGCC 57.087 45.455 17.81 1.60 43.90 3.93
248 249 7.123547 TCAATTGGTAGCCTTGTAATTTAAGGG 59.876 37.037 17.81 4.22 43.90 3.95
249 250 8.062065 TCAATTGGTAGCCTTGTAATTTAAGG 57.938 34.615 5.42 13.92 45.96 2.69
250 251 9.573133 CTTCAATTGGTAGCCTTGTAATTTAAG 57.427 33.333 5.42 0.00 0.00 1.85
251 252 8.032451 GCTTCAATTGGTAGCCTTGTAATTTAA 58.968 33.333 17.53 0.00 0.00 1.52
252 253 7.396055 AGCTTCAATTGGTAGCCTTGTAATTTA 59.604 33.333 21.97 0.00 35.53 1.40
253 254 6.211384 AGCTTCAATTGGTAGCCTTGTAATTT 59.789 34.615 21.97 5.53 35.53 1.82
254 255 5.716703 AGCTTCAATTGGTAGCCTTGTAATT 59.283 36.000 21.97 6.06 35.53 1.40
255 256 5.264395 AGCTTCAATTGGTAGCCTTGTAAT 58.736 37.500 21.97 6.59 35.53 1.89
256 257 4.662278 AGCTTCAATTGGTAGCCTTGTAA 58.338 39.130 21.97 0.70 35.53 2.41
257 258 4.301072 AGCTTCAATTGGTAGCCTTGTA 57.699 40.909 21.97 0.00 35.53 2.41
258 259 3.160679 AGCTTCAATTGGTAGCCTTGT 57.839 42.857 21.97 7.93 35.53 3.16
259 260 4.142381 GGTAAGCTTCAATTGGTAGCCTTG 60.142 45.833 21.97 0.00 35.53 3.61
260 261 4.017126 GGTAAGCTTCAATTGGTAGCCTT 58.983 43.478 21.97 18.13 35.53 4.35
261 262 3.621558 GGTAAGCTTCAATTGGTAGCCT 58.378 45.455 21.97 15.54 35.53 4.58
262 263 2.688446 GGGTAAGCTTCAATTGGTAGCC 59.312 50.000 21.97 14.11 35.53 3.93
263 264 2.354821 CGGGTAAGCTTCAATTGGTAGC 59.645 50.000 19.54 19.54 35.16 3.58
264 265 2.354821 GCGGGTAAGCTTCAATTGGTAG 59.645 50.000 0.00 4.96 0.00 3.18
265 266 2.290387 TGCGGGTAAGCTTCAATTGGTA 60.290 45.455 0.00 0.00 38.13 3.25
266 267 1.173913 GCGGGTAAGCTTCAATTGGT 58.826 50.000 0.00 0.00 0.00 3.67
267 268 1.173043 TGCGGGTAAGCTTCAATTGG 58.827 50.000 0.00 0.00 38.13 3.16
268 269 3.296322 TTTGCGGGTAAGCTTCAATTG 57.704 42.857 0.00 0.00 38.13 2.32
269 270 4.329462 TTTTTGCGGGTAAGCTTCAATT 57.671 36.364 0.00 0.00 38.13 2.32
311 312 9.035607 CGAGTGCTACATTATATTGTTCTCTTT 57.964 33.333 5.64 0.00 0.00 2.52
312 313 8.414003 TCGAGTGCTACATTATATTGTTCTCTT 58.586 33.333 5.64 0.00 0.00 2.85
313 314 7.941919 TCGAGTGCTACATTATATTGTTCTCT 58.058 34.615 5.64 5.28 0.00 3.10
314 315 8.575565 TTCGAGTGCTACATTATATTGTTCTC 57.424 34.615 5.64 8.04 0.00 2.87
315 316 9.547753 AATTCGAGTGCTACATTATATTGTTCT 57.452 29.630 5.64 1.48 0.00 3.01
316 317 9.798885 GAATTCGAGTGCTACATTATATTGTTC 57.201 33.333 5.64 0.66 0.00 3.18
317 318 9.325198 TGAATTCGAGTGCTACATTATATTGTT 57.675 29.630 5.64 0.00 0.00 2.83
318 319 8.887036 TGAATTCGAGTGCTACATTATATTGT 57.113 30.769 0.04 5.64 0.00 2.71
321 322 9.325198 TGTTTGAATTCGAGTGCTACATTATAT 57.675 29.630 0.04 0.00 0.00 0.86
322 323 8.600625 GTGTTTGAATTCGAGTGCTACATTATA 58.399 33.333 0.04 0.00 0.00 0.98
323 324 7.414098 GGTGTTTGAATTCGAGTGCTACATTAT 60.414 37.037 0.04 0.00 0.00 1.28
324 325 6.128391 GGTGTTTGAATTCGAGTGCTACATTA 60.128 38.462 0.04 0.00 0.00 1.90
325 326 5.334879 GGTGTTTGAATTCGAGTGCTACATT 60.335 40.000 0.04 0.00 0.00 2.71
326 327 4.154195 GGTGTTTGAATTCGAGTGCTACAT 59.846 41.667 0.04 0.00 0.00 2.29
327 328 3.496884 GGTGTTTGAATTCGAGTGCTACA 59.503 43.478 0.04 0.00 0.00 2.74
328 329 3.746492 AGGTGTTTGAATTCGAGTGCTAC 59.254 43.478 0.04 0.00 0.00 3.58
329 330 3.745975 CAGGTGTTTGAATTCGAGTGCTA 59.254 43.478 0.04 0.00 0.00 3.49
330 331 2.549754 CAGGTGTTTGAATTCGAGTGCT 59.450 45.455 0.04 0.00 0.00 4.40
331 332 2.290641 ACAGGTGTTTGAATTCGAGTGC 59.709 45.455 0.04 0.00 0.00 4.40
332 333 4.552166 AACAGGTGTTTGAATTCGAGTG 57.448 40.909 0.04 0.00 33.93 3.51
333 334 6.687081 TTTAACAGGTGTTTGAATTCGAGT 57.313 33.333 0.00 0.00 39.31 4.18
334 335 6.970043 TGTTTTAACAGGTGTTTGAATTCGAG 59.030 34.615 0.00 0.00 39.31 4.04
335 336 6.853720 TGTTTTAACAGGTGTTTGAATTCGA 58.146 32.000 0.00 0.00 39.31 3.71
350 351 7.846644 TCGAACCTTAAAGTCTGTTTTAACA 57.153 32.000 0.00 0.00 37.37 2.41
351 352 9.558648 TTTTCGAACCTTAAAGTCTGTTTTAAC 57.441 29.630 0.00 0.00 31.28 2.01
357 358 8.440833 CGATAATTTTCGAACCTTAAAGTCTGT 58.559 33.333 12.27 0.00 41.62 3.41
358 359 8.653338 TCGATAATTTTCGAACCTTAAAGTCTG 58.347 33.333 17.02 0.00 44.56 3.51
359 360 8.767478 TCGATAATTTTCGAACCTTAAAGTCT 57.233 30.769 17.02 0.00 44.56 3.24
360 361 8.866956 TCTCGATAATTTTCGAACCTTAAAGTC 58.133 33.333 19.24 0.00 46.54 3.01
361 362 8.767478 TCTCGATAATTTTCGAACCTTAAAGT 57.233 30.769 19.24 0.00 46.54 2.66
362 363 9.690434 CTTCTCGATAATTTTCGAACCTTAAAG 57.310 33.333 19.24 12.45 46.54 1.85
363 364 8.173130 GCTTCTCGATAATTTTCGAACCTTAAA 58.827 33.333 19.24 8.28 46.54 1.52
364 365 7.463648 CGCTTCTCGATAATTTTCGAACCTTAA 60.464 37.037 19.24 9.59 46.54 1.85
365 366 6.020121 CGCTTCTCGATAATTTTCGAACCTTA 60.020 38.462 19.24 0.00 46.54 2.69
366 367 5.220416 CGCTTCTCGATAATTTTCGAACCTT 60.220 40.000 19.24 0.00 46.54 3.50
367 368 4.267928 CGCTTCTCGATAATTTTCGAACCT 59.732 41.667 19.24 0.00 46.54 3.50
368 369 4.266976 TCGCTTCTCGATAATTTTCGAACC 59.733 41.667 19.24 8.85 46.54 3.62
369 370 5.371344 TCGCTTCTCGATAATTTTCGAAC 57.629 39.130 19.24 10.01 46.54 3.95
370 371 6.583912 ATTCGCTTCTCGATAATTTTCGAA 57.416 33.333 19.24 7.32 46.54 3.71
378 379 7.148474 AAGTTTTGCTTATTCGCTTCTCGATAA 60.148 33.333 0.00 0.00 40.45 1.75
379 380 6.312918 AAGTTTTGCTTATTCGCTTCTCGATA 59.687 34.615 0.00 0.00 40.45 2.92
380 381 5.122396 AAGTTTTGCTTATTCGCTTCTCGAT 59.878 36.000 0.00 0.00 40.45 3.59
381 382 3.994392 AGTTTTGCTTATTCGCTTCTCGA 59.006 39.130 0.00 0.00 46.88 4.04
382 383 4.327854 AGTTTTGCTTATTCGCTTCTCG 57.672 40.909 0.00 0.00 40.15 4.04
383 384 5.932661 AGAAGTTTTGCTTATTCGCTTCTC 58.067 37.500 0.00 0.00 37.28 2.87
384 385 5.948992 AGAAGTTTTGCTTATTCGCTTCT 57.051 34.783 0.00 0.00 37.59 2.85
385 386 7.217070 CACATAGAAGTTTTGCTTATTCGCTTC 59.783 37.037 0.00 0.00 37.59 3.86
386 387 7.023575 CACATAGAAGTTTTGCTTATTCGCTT 58.976 34.615 0.00 0.00 37.59 4.68
387 388 6.371548 TCACATAGAAGTTTTGCTTATTCGCT 59.628 34.615 0.00 0.00 37.59 4.93
388 389 6.542852 TCACATAGAAGTTTTGCTTATTCGC 58.457 36.000 0.00 0.00 37.59 4.70
389 390 9.638300 GTATCACATAGAAGTTTTGCTTATTCG 57.362 33.333 0.00 0.00 37.59 3.34
392 393 9.672673 ACTGTATCACATAGAAGTTTTGCTTAT 57.327 29.630 0.00 0.00 37.59 1.73
394 395 7.986085 ACTGTATCACATAGAAGTTTTGCTT 57.014 32.000 0.00 0.00 40.76 3.91
408 409 9.967346 GAAGTTCTGCTTATATACTGTATCACA 57.033 33.333 3.09 0.00 37.59 3.58
409 410 9.967346 TGAAGTTCTGCTTATATACTGTATCAC 57.033 33.333 3.09 0.00 37.59 3.06
414 415 9.726438 AAAACTGAAGTTCTGCTTATATACTGT 57.274 29.630 9.48 0.00 37.59 3.55
415 416 9.979270 CAAAACTGAAGTTCTGCTTATATACTG 57.021 33.333 9.48 0.00 37.59 2.74
416 417 9.944376 TCAAAACTGAAGTTCTGCTTATATACT 57.056 29.630 9.48 0.00 37.59 2.12
417 418 9.974750 GTCAAAACTGAAGTTCTGCTTATATAC 57.025 33.333 9.48 0.00 37.59 1.47
418 419 9.719355 TGTCAAAACTGAAGTTCTGCTTATATA 57.281 29.630 9.48 0.00 37.59 0.86
419 420 8.621532 TGTCAAAACTGAAGTTCTGCTTATAT 57.378 30.769 9.48 0.00 37.59 0.86
420 421 7.715249 ACTGTCAAAACTGAAGTTCTGCTTATA 59.285 33.333 9.48 0.00 37.59 0.98
421 422 6.543831 ACTGTCAAAACTGAAGTTCTGCTTAT 59.456 34.615 9.48 0.00 37.59 1.73
422 423 5.880332 ACTGTCAAAACTGAAGTTCTGCTTA 59.120 36.000 9.48 0.00 37.59 3.09
423 424 4.702131 ACTGTCAAAACTGAAGTTCTGCTT 59.298 37.500 9.48 1.44 40.76 3.91
424 425 4.265073 ACTGTCAAAACTGAAGTTCTGCT 58.735 39.130 9.48 0.00 37.25 4.24
425 426 4.622701 ACTGTCAAAACTGAAGTTCTGC 57.377 40.909 9.48 0.00 37.25 4.26
426 427 5.817816 ACCTACTGTCAAAACTGAAGTTCTG 59.182 40.000 8.11 8.11 37.25 3.02
427 428 5.990668 ACCTACTGTCAAAACTGAAGTTCT 58.009 37.500 4.17 0.00 37.25 3.01
428 429 6.288426 GACCTACTGTCAAAACTGAAGTTC 57.712 41.667 0.00 0.00 43.85 3.01
441 442 1.410882 GAGGCCATCAGACCTACTGTC 59.589 57.143 5.01 0.00 45.86 3.51
442 443 1.007721 AGAGGCCATCAGACCTACTGT 59.992 52.381 5.01 0.00 45.86 3.55
443 444 1.786937 AGAGGCCATCAGACCTACTG 58.213 55.000 5.01 0.00 46.97 2.74
444 445 2.559381 AAGAGGCCATCAGACCTACT 57.441 50.000 5.01 0.00 36.05 2.57
445 446 3.643792 ACATAAGAGGCCATCAGACCTAC 59.356 47.826 5.01 0.00 36.05 3.18
446 447 3.928754 ACATAAGAGGCCATCAGACCTA 58.071 45.455 5.01 0.00 36.05 3.08
447 448 2.769209 ACATAAGAGGCCATCAGACCT 58.231 47.619 5.01 0.00 39.65 3.85
448 449 4.689612 TTACATAAGAGGCCATCAGACC 57.310 45.455 5.01 0.00 0.00 3.85
449 450 6.870965 CACTATTACATAAGAGGCCATCAGAC 59.129 42.308 5.01 0.00 0.00 3.51
450 451 6.554982 ACACTATTACATAAGAGGCCATCAGA 59.445 38.462 5.01 0.00 0.00 3.27
451 452 6.763355 ACACTATTACATAAGAGGCCATCAG 58.237 40.000 5.01 0.00 0.00 2.90
452 453 6.747414 ACACTATTACATAAGAGGCCATCA 57.253 37.500 5.01 0.00 0.00 3.07
453 454 6.651225 GGAACACTATTACATAAGAGGCCATC 59.349 42.308 5.01 0.00 0.00 3.51
454 455 6.534634 GGAACACTATTACATAAGAGGCCAT 58.465 40.000 5.01 0.00 0.00 4.40
455 456 5.452776 CGGAACACTATTACATAAGAGGCCA 60.453 44.000 5.01 0.00 0.00 5.36
456 457 4.989168 CGGAACACTATTACATAAGAGGCC 59.011 45.833 0.00 0.00 0.00 5.19
457 458 4.448060 GCGGAACACTATTACATAAGAGGC 59.552 45.833 0.00 0.00 0.00 4.70
458 459 4.989168 GGCGGAACACTATTACATAAGAGG 59.011 45.833 0.00 0.00 0.00 3.69
459 460 5.597806 TGGCGGAACACTATTACATAAGAG 58.402 41.667 0.00 0.00 0.00 2.85
460 461 5.601583 TGGCGGAACACTATTACATAAGA 57.398 39.130 0.00 0.00 0.00 2.10
461 462 5.758296 ACATGGCGGAACACTATTACATAAG 59.242 40.000 0.00 0.00 0.00 1.73
462 463 5.525745 CACATGGCGGAACACTATTACATAA 59.474 40.000 0.00 0.00 0.00 1.90
463 464 5.053811 CACATGGCGGAACACTATTACATA 58.946 41.667 0.00 0.00 0.00 2.29
464 465 3.876914 CACATGGCGGAACACTATTACAT 59.123 43.478 0.00 0.00 0.00 2.29
465 466 3.266636 CACATGGCGGAACACTATTACA 58.733 45.455 0.00 0.00 0.00 2.41
466 467 3.267483 ACACATGGCGGAACACTATTAC 58.733 45.455 0.00 0.00 0.00 1.89
467 468 3.620427 ACACATGGCGGAACACTATTA 57.380 42.857 0.00 0.00 0.00 0.98
468 469 2.489938 ACACATGGCGGAACACTATT 57.510 45.000 0.00 0.00 0.00 1.73
469 470 3.055385 AGTTACACATGGCGGAACACTAT 60.055 43.478 13.27 0.00 0.00 2.12
470 471 2.300723 AGTTACACATGGCGGAACACTA 59.699 45.455 13.27 0.00 0.00 2.74
471 472 1.071699 AGTTACACATGGCGGAACACT 59.928 47.619 13.27 0.00 0.00 3.55
472 473 1.196808 CAGTTACACATGGCGGAACAC 59.803 52.381 13.27 0.00 0.00 3.32
473 474 1.518325 CAGTTACACATGGCGGAACA 58.482 50.000 13.27 0.00 0.00 3.18
474 475 0.168128 GCAGTTACACATGGCGGAAC 59.832 55.000 0.00 0.61 0.00 3.62
475 476 0.036164 AGCAGTTACACATGGCGGAA 59.964 50.000 0.00 0.00 0.00 4.30
476 477 0.036164 AAGCAGTTACACATGGCGGA 59.964 50.000 0.00 0.00 0.00 5.54
477 478 0.881118 AAAGCAGTTACACATGGCGG 59.119 50.000 0.00 0.00 0.00 6.13
478 479 2.287547 ACAAAAGCAGTTACACATGGCG 60.288 45.455 0.00 0.00 0.00 5.69
479 480 3.369546 ACAAAAGCAGTTACACATGGC 57.630 42.857 0.00 0.00 0.00 4.40
480 481 6.676950 TCATTACAAAAGCAGTTACACATGG 58.323 36.000 0.00 0.00 0.00 3.66
481 482 8.641155 CATTCATTACAAAAGCAGTTACACATG 58.359 33.333 0.00 0.00 0.00 3.21
482 483 8.575589 TCATTCATTACAAAAGCAGTTACACAT 58.424 29.630 0.00 0.00 0.00 3.21
483 484 7.935520 TCATTCATTACAAAAGCAGTTACACA 58.064 30.769 0.00 0.00 0.00 3.72
484 485 8.853345 CATCATTCATTACAAAAGCAGTTACAC 58.147 33.333 0.00 0.00 0.00 2.90
485 486 8.575589 ACATCATTCATTACAAAAGCAGTTACA 58.424 29.630 0.00 0.00 0.00 2.41
486 487 8.970691 ACATCATTCATTACAAAAGCAGTTAC 57.029 30.769 0.00 0.00 0.00 2.50
488 489 9.630098 CTTACATCATTCATTACAAAAGCAGTT 57.370 29.630 0.00 0.00 0.00 3.16
489 490 9.013229 TCTTACATCATTCATTACAAAAGCAGT 57.987 29.630 0.00 0.00 0.00 4.40
490 491 9.844790 TTCTTACATCATTCATTACAAAAGCAG 57.155 29.630 0.00 0.00 0.00 4.24
526 527 9.777008 TTGAAAACCCTCCTATATTAATTTGGT 57.223 29.630 0.00 0.00 0.00 3.67
547 548 8.977412 ACATAGAGGTCCTTTTTCTTTTTGAAA 58.023 29.630 0.00 0.00 42.33 2.69
548 549 8.413229 CACATAGAGGTCCTTTTTCTTTTTGAA 58.587 33.333 0.00 0.00 0.00 2.69
549 550 7.777910 TCACATAGAGGTCCTTTTTCTTTTTGA 59.222 33.333 0.00 0.00 0.00 2.69
550 551 7.940850 TCACATAGAGGTCCTTTTTCTTTTTG 58.059 34.615 0.00 0.00 0.00 2.44
551 552 8.533569 TTCACATAGAGGTCCTTTTTCTTTTT 57.466 30.769 0.00 0.00 0.00 1.94
552 553 8.533569 TTTCACATAGAGGTCCTTTTTCTTTT 57.466 30.769 0.00 0.00 0.00 2.27
553 554 8.414003 GTTTTCACATAGAGGTCCTTTTTCTTT 58.586 33.333 0.00 0.00 0.00 2.52
554 555 7.780271 AGTTTTCACATAGAGGTCCTTTTTCTT 59.220 33.333 0.00 0.00 0.00 2.52
555 556 7.290813 AGTTTTCACATAGAGGTCCTTTTTCT 58.709 34.615 0.00 0.00 0.00 2.52
556 557 7.511959 AGTTTTCACATAGAGGTCCTTTTTC 57.488 36.000 0.00 0.00 0.00 2.29
557 558 7.201911 CCAAGTTTTCACATAGAGGTCCTTTTT 60.202 37.037 0.00 0.00 0.00 1.94
558 559 6.265422 CCAAGTTTTCACATAGAGGTCCTTTT 59.735 38.462 0.00 0.00 0.00 2.27
559 560 5.770162 CCAAGTTTTCACATAGAGGTCCTTT 59.230 40.000 0.00 0.00 0.00 3.11
560 561 5.073144 TCCAAGTTTTCACATAGAGGTCCTT 59.927 40.000 0.00 0.00 0.00 3.36
561 562 4.597507 TCCAAGTTTTCACATAGAGGTCCT 59.402 41.667 0.00 0.00 0.00 3.85
562 563 4.906618 TCCAAGTTTTCACATAGAGGTCC 58.093 43.478 0.00 0.00 0.00 4.46
563 564 6.568653 GCTTTCCAAGTTTTCACATAGAGGTC 60.569 42.308 0.00 0.00 0.00 3.85
564 565 5.241728 GCTTTCCAAGTTTTCACATAGAGGT 59.758 40.000 0.00 0.00 0.00 3.85
565 566 5.617751 CGCTTTCCAAGTTTTCACATAGAGG 60.618 44.000 0.00 0.00 0.00 3.69
571 572 1.202359 GCCGCTTTCCAAGTTTTCACA 60.202 47.619 0.00 0.00 0.00 3.58
579 580 1.805254 CTGGATGCCGCTTTCCAAG 59.195 57.895 14.20 7.23 41.36 3.61
582 583 2.439156 AGCTGGATGCCGCTTTCC 60.439 61.111 0.00 6.10 44.23 3.13
583 584 2.476320 GGAGCTGGATGCCGCTTTC 61.476 63.158 4.35 0.00 44.23 2.62
601 602 2.262915 GCCCACGAGTCTGGAGTG 59.737 66.667 9.46 0.49 32.30 3.51
605 606 4.767255 GCTGGCCCACGAGTCTGG 62.767 72.222 0.00 2.56 0.00 3.86
633 634 1.495584 CCAACTTGACGTCGGTGTGG 61.496 60.000 11.62 16.02 0.00 4.17
647 658 1.352622 TGCAGGACAGGGTTCCAACT 61.353 55.000 0.00 0.00 38.25 3.16
692 703 0.463833 CGAATGCAGTACCCTTCCCC 60.464 60.000 0.00 0.00 0.00 4.81
766 777 0.034616 GATAGCGATGCCTCAAGCCT 59.965 55.000 0.00 0.00 42.71 4.58
853 864 0.959553 GGTGAGAGTGTGGACGAAGA 59.040 55.000 0.00 0.00 0.00 2.87
874 885 4.993905 TCGTGGTATATAAGATGCGATGG 58.006 43.478 0.00 0.00 0.00 3.51
951 962 1.018226 CGCTGCTCTGAAACCTGAGG 61.018 60.000 0.00 0.00 32.35 3.86
962 973 0.034616 ACTTGAAGCTTCGCTGCTCT 59.965 50.000 21.11 0.00 43.24 4.09
1290 1302 3.188786 GCCGTCAGCATCGTCACC 61.189 66.667 0.00 0.00 42.97 4.02
1537 1549 1.225991 CACACACACACGCACACAC 60.226 57.895 0.00 0.00 0.00 3.82
1538 1550 2.394563 CCACACACACACGCACACA 61.395 57.895 0.00 0.00 0.00 3.72
1539 1551 1.436195 ATCCACACACACACGCACAC 61.436 55.000 0.00 0.00 0.00 3.82
1540 1552 1.153269 ATCCACACACACACGCACA 60.153 52.632 0.00 0.00 0.00 4.57
1541 1553 1.569493 GATCCACACACACACGCAC 59.431 57.895 0.00 0.00 0.00 5.34
1542 1554 1.953642 CGATCCACACACACACGCA 60.954 57.895 0.00 0.00 0.00 5.24
1543 1555 1.663388 TCGATCCACACACACACGC 60.663 57.895 0.00 0.00 0.00 5.34
1544 1556 1.605481 CGTCGATCCACACACACACG 61.605 60.000 0.00 0.00 0.00 4.49
1545 1557 1.886861 GCGTCGATCCACACACACAC 61.887 60.000 0.00 0.00 0.00 3.82
1546 1558 1.663388 GCGTCGATCCACACACACA 60.663 57.895 0.00 0.00 0.00 3.72
1604 1618 4.450976 TGCAGCTTATTATTCATCGGTGT 58.549 39.130 0.00 0.00 0.00 4.16
1738 1769 1.371337 TATGGACGACGTGGACTCCG 61.371 60.000 4.58 0.00 0.00 4.63
1770 1801 5.890752 AAATCCCTTTTAACCCCGAAAAA 57.109 34.783 0.00 0.00 0.00 1.94
1771 1802 5.365895 TGAAAATCCCTTTTAACCCCGAAAA 59.634 36.000 0.00 0.00 34.73 2.29
1772 1803 4.900054 TGAAAATCCCTTTTAACCCCGAAA 59.100 37.500 0.00 0.00 34.73 3.46
1773 1804 4.481072 TGAAAATCCCTTTTAACCCCGAA 58.519 39.130 0.00 0.00 34.73 4.30
1774 1805 4.115398 TGAAAATCCCTTTTAACCCCGA 57.885 40.909 0.00 0.00 34.73 5.14
1775 1806 5.175127 CAATGAAAATCCCTTTTAACCCCG 58.825 41.667 0.00 0.00 34.73 5.73
1776 1807 4.941263 GCAATGAAAATCCCTTTTAACCCC 59.059 41.667 0.00 0.00 34.73 4.95
1777 1808 5.804639 AGCAATGAAAATCCCTTTTAACCC 58.195 37.500 0.00 0.00 34.73 4.11
1778 1809 6.463360 TGAGCAATGAAAATCCCTTTTAACC 58.537 36.000 0.00 0.00 34.73 2.85
1779 1810 7.961325 TTGAGCAATGAAAATCCCTTTTAAC 57.039 32.000 0.00 0.00 34.73 2.01
1794 1825 1.479323 CTGGTTCCCCATTGAGCAATG 59.521 52.381 14.63 14.63 45.77 2.82
1795 1826 1.620524 CCTGGTTCCCCATTGAGCAAT 60.621 52.381 0.00 0.00 40.90 3.56
1796 1827 0.251742 CCTGGTTCCCCATTGAGCAA 60.252 55.000 0.00 0.00 40.90 3.91
1797 1828 1.383799 CCTGGTTCCCCATTGAGCA 59.616 57.895 0.00 0.00 40.90 4.26
1798 1829 0.681243 GACCTGGTTCCCCATTGAGC 60.681 60.000 0.00 0.00 40.90 4.26
1799 1830 0.392998 CGACCTGGTTCCCCATTGAG 60.393 60.000 0.00 0.00 40.90 3.02
1800 1831 1.131303 ACGACCTGGTTCCCCATTGA 61.131 55.000 0.00 0.00 40.90 2.57
1801 1832 0.676782 GACGACCTGGTTCCCCATTG 60.677 60.000 0.00 0.00 40.90 2.82
1802 1833 1.683441 GACGACCTGGTTCCCCATT 59.317 57.895 0.00 0.00 40.90 3.16
1803 1834 2.298661 GGACGACCTGGTTCCCCAT 61.299 63.158 0.00 0.00 40.90 4.00
1804 1835 2.926242 GGACGACCTGGTTCCCCA 60.926 66.667 0.00 0.00 38.87 4.96
1805 1836 0.979187 TATGGACGACCTGGTTCCCC 60.979 60.000 13.69 9.52 37.04 4.81
1806 1837 0.177373 GTATGGACGACCTGGTTCCC 59.823 60.000 13.69 9.82 37.04 3.97
1807 1838 0.899720 TGTATGGACGACCTGGTTCC 59.100 55.000 10.13 10.13 37.04 3.62
1808 1839 2.754946 TTGTATGGACGACCTGGTTC 57.245 50.000 0.00 0.00 37.04 3.62
1809 1840 2.370849 ACTTTGTATGGACGACCTGGTT 59.629 45.455 0.00 0.00 37.04 3.67
1810 1841 1.975680 ACTTTGTATGGACGACCTGGT 59.024 47.619 0.00 0.00 37.04 4.00
1811 1842 2.742053 CAACTTTGTATGGACGACCTGG 59.258 50.000 5.33 0.00 37.04 4.45
1812 1843 2.742053 CCAACTTTGTATGGACGACCTG 59.258 50.000 5.33 0.00 39.12 4.00
1813 1844 2.290071 CCCAACTTTGTATGGACGACCT 60.290 50.000 5.33 0.00 39.12 3.85
1814 1845 2.081462 CCCAACTTTGTATGGACGACC 58.919 52.381 0.00 0.00 39.12 4.79
1815 1846 2.081462 CCCCAACTTTGTATGGACGAC 58.919 52.381 0.00 0.00 39.12 4.34
1816 1847 1.700739 ACCCCAACTTTGTATGGACGA 59.299 47.619 0.00 0.00 39.12 4.20
1817 1848 2.194201 ACCCCAACTTTGTATGGACG 57.806 50.000 0.00 0.00 39.12 4.79
1818 1849 4.023726 TGTACCCCAACTTTGTATGGAC 57.976 45.455 0.00 0.00 39.12 4.02
1819 1850 4.324719 GGATGTACCCCAACTTTGTATGGA 60.325 45.833 0.00 0.00 39.12 3.41
1820 1851 3.951680 GGATGTACCCCAACTTTGTATGG 59.048 47.826 0.00 0.00 36.42 2.74
1821 1852 3.625764 CGGATGTACCCCAACTTTGTATG 59.374 47.826 0.00 0.00 34.64 2.39
1822 1853 3.264964 ACGGATGTACCCCAACTTTGTAT 59.735 43.478 0.00 0.00 34.64 2.29
1823 1854 2.638855 ACGGATGTACCCCAACTTTGTA 59.361 45.455 0.00 0.00 34.64 2.41
1824 1855 1.422402 ACGGATGTACCCCAACTTTGT 59.578 47.619 0.00 0.00 34.64 2.83
1825 1856 2.194201 ACGGATGTACCCCAACTTTG 57.806 50.000 0.00 0.00 34.64 2.77
1826 1857 2.237893 CCTACGGATGTACCCCAACTTT 59.762 50.000 0.00 0.00 34.64 2.66
1827 1858 1.835531 CCTACGGATGTACCCCAACTT 59.164 52.381 0.00 0.00 34.64 2.66
1828 1859 1.492764 CCTACGGATGTACCCCAACT 58.507 55.000 0.00 0.00 34.64 3.16
1829 1860 0.466963 CCCTACGGATGTACCCCAAC 59.533 60.000 0.00 0.00 34.64 3.77
1830 1861 1.339644 GCCCTACGGATGTACCCCAA 61.340 60.000 0.00 0.00 34.64 4.12
1831 1862 1.763256 GCCCTACGGATGTACCCCA 60.763 63.158 0.00 0.00 34.64 4.96
1832 1863 1.125711 ATGCCCTACGGATGTACCCC 61.126 60.000 0.00 0.00 34.64 4.95
1833 1864 0.034896 CATGCCCTACGGATGTACCC 59.965 60.000 0.00 0.00 34.64 3.69
1834 1865 1.045407 TCATGCCCTACGGATGTACC 58.955 55.000 0.00 0.00 0.00 3.34
1835 1866 1.270147 GGTCATGCCCTACGGATGTAC 60.270 57.143 0.00 0.00 0.00 2.90
1836 1867 1.045407 GGTCATGCCCTACGGATGTA 58.955 55.000 0.00 0.00 0.00 2.29
1837 1868 0.691078 AGGTCATGCCCTACGGATGT 60.691 55.000 0.00 0.00 38.26 3.06
1838 1869 0.034059 GAGGTCATGCCCTACGGATG 59.966 60.000 0.00 0.00 38.26 3.51
1839 1870 0.398522 TGAGGTCATGCCCTACGGAT 60.399 55.000 0.00 0.00 38.26 4.18
1840 1871 0.616395 TTGAGGTCATGCCCTACGGA 60.616 55.000 0.00 0.00 38.26 4.69
1841 1872 0.462047 GTTGAGGTCATGCCCTACGG 60.462 60.000 0.00 0.00 38.26 4.02
1842 1873 0.462047 GGTTGAGGTCATGCCCTACG 60.462 60.000 0.00 0.00 38.26 3.51
1843 1874 0.618458 TGGTTGAGGTCATGCCCTAC 59.382 55.000 0.00 0.00 38.26 3.18
1844 1875 1.367346 TTGGTTGAGGTCATGCCCTA 58.633 50.000 0.00 0.00 38.26 3.53
1845 1876 0.482446 TTTGGTTGAGGTCATGCCCT 59.518 50.000 0.00 0.00 38.26 5.19
1846 1877 0.603065 GTTTGGTTGAGGTCATGCCC 59.397 55.000 2.95 0.00 38.26 5.36
1847 1878 1.270550 CAGTTTGGTTGAGGTCATGCC 59.729 52.381 0.00 0.00 37.58 4.40
1848 1879 1.336240 GCAGTTTGGTTGAGGTCATGC 60.336 52.381 0.00 0.00 0.00 4.06
1849 1880 1.955778 TGCAGTTTGGTTGAGGTCATG 59.044 47.619 0.00 0.00 0.00 3.07
1850 1881 2.233271 CTGCAGTTTGGTTGAGGTCAT 58.767 47.619 5.25 0.00 0.00 3.06
1851 1882 1.064758 ACTGCAGTTTGGTTGAGGTCA 60.065 47.619 15.25 0.00 0.00 4.02
1852 1883 1.604278 GACTGCAGTTTGGTTGAGGTC 59.396 52.381 22.65 0.00 0.00 3.85
1853 1884 1.680338 GACTGCAGTTTGGTTGAGGT 58.320 50.000 22.65 0.00 0.00 3.85
1854 1885 0.954452 GGACTGCAGTTTGGTTGAGG 59.046 55.000 22.65 0.00 0.00 3.86
1855 1886 1.972872 AGGACTGCAGTTTGGTTGAG 58.027 50.000 22.65 0.00 0.00 3.02
1856 1887 2.810400 GCTAGGACTGCAGTTTGGTTGA 60.810 50.000 22.65 1.81 0.00 3.18
1857 1888 1.537202 GCTAGGACTGCAGTTTGGTTG 59.463 52.381 22.65 10.50 0.00 3.77
1858 1889 1.545651 GGCTAGGACTGCAGTTTGGTT 60.546 52.381 22.65 7.69 0.00 3.67
1859 1890 0.036875 GGCTAGGACTGCAGTTTGGT 59.963 55.000 22.65 8.53 0.00 3.67
1860 1891 0.326264 AGGCTAGGACTGCAGTTTGG 59.674 55.000 22.65 15.16 0.00 3.28
1861 1892 1.277557 AGAGGCTAGGACTGCAGTTTG 59.722 52.381 22.65 12.24 0.00 2.93
1862 1893 1.650528 AGAGGCTAGGACTGCAGTTT 58.349 50.000 22.65 14.95 0.00 2.66
1863 1894 2.104170 GTAGAGGCTAGGACTGCAGTT 58.896 52.381 22.65 8.73 0.00 3.16
1864 1895 1.770294 GTAGAGGCTAGGACTGCAGT 58.230 55.000 21.88 21.88 0.00 4.40
1865 1896 0.665835 CGTAGAGGCTAGGACTGCAG 59.334 60.000 13.48 13.48 0.00 4.41
1866 1897 1.384989 GCGTAGAGGCTAGGACTGCA 61.385 60.000 0.00 0.00 0.00 4.41
1867 1898 1.360911 GCGTAGAGGCTAGGACTGC 59.639 63.158 0.00 0.00 0.00 4.40
1868 1899 1.649815 CGCGTAGAGGCTAGGACTG 59.350 63.158 0.00 0.00 0.00 3.51
1869 1900 1.526455 CCGCGTAGAGGCTAGGACT 60.526 63.158 4.92 0.00 43.01 3.85
1870 1901 3.032339 CCGCGTAGAGGCTAGGAC 58.968 66.667 4.92 0.00 43.01 3.85
1878 1909 3.636313 TTTGGCCGTCCGCGTAGAG 62.636 63.158 4.92 0.00 38.94 2.43
1879 1910 3.682885 TTTGGCCGTCCGCGTAGA 61.683 61.111 4.92 0.00 38.94 2.59
1880 1911 3.484547 GTTTGGCCGTCCGCGTAG 61.485 66.667 4.92 0.00 38.94 3.51
1893 1924 6.533723 TGTTAGTCATAGATTAGCCACGTTTG 59.466 38.462 0.00 0.00 0.00 2.93
1894 1925 6.636705 TGTTAGTCATAGATTAGCCACGTTT 58.363 36.000 0.00 0.00 0.00 3.60
1895 1926 6.096423 TCTGTTAGTCATAGATTAGCCACGTT 59.904 38.462 0.00 0.00 0.00 3.99
1896 1927 5.593095 TCTGTTAGTCATAGATTAGCCACGT 59.407 40.000 0.00 0.00 0.00 4.49
1897 1928 6.073327 TCTGTTAGTCATAGATTAGCCACG 57.927 41.667 0.00 0.00 0.00 4.94
1898 1929 8.894768 AATTCTGTTAGTCATAGATTAGCCAC 57.105 34.615 0.00 0.00 0.00 5.01
1899 1930 9.905713 AAAATTCTGTTAGTCATAGATTAGCCA 57.094 29.630 0.00 0.00 0.00 4.75
1909 1940 9.965902 AGTAGGAATCAAAATTCTGTTAGTCAT 57.034 29.630 0.00 0.00 40.99 3.06
1916 1947 9.739276 TCACATTAGTAGGAATCAAAATTCTGT 57.261 29.630 0.00 0.00 40.99 3.41
1918 1949 8.897752 GCTCACATTAGTAGGAATCAAAATTCT 58.102 33.333 0.00 0.00 40.99 2.40
1919 1950 8.677300 TGCTCACATTAGTAGGAATCAAAATTC 58.323 33.333 0.00 0.00 40.56 2.17
1920 1951 8.579850 TGCTCACATTAGTAGGAATCAAAATT 57.420 30.769 0.00 0.00 0.00 1.82
1921 1952 8.579850 TTGCTCACATTAGTAGGAATCAAAAT 57.420 30.769 0.00 0.00 0.00 1.82
1922 1953 7.994425 TTGCTCACATTAGTAGGAATCAAAA 57.006 32.000 0.00 0.00 0.00 2.44
1923 1954 9.330063 CTATTGCTCACATTAGTAGGAATCAAA 57.670 33.333 0.00 0.00 33.89 2.69
1924 1955 8.704668 TCTATTGCTCACATTAGTAGGAATCAA 58.295 33.333 0.00 0.00 33.89 2.57
1925 1956 8.250143 TCTATTGCTCACATTAGTAGGAATCA 57.750 34.615 0.00 0.00 33.89 2.57
1926 1957 7.330700 GCTCTATTGCTCACATTAGTAGGAATC 59.669 40.741 0.00 0.00 33.89 2.52
1927 1958 7.016072 AGCTCTATTGCTCACATTAGTAGGAAT 59.984 37.037 0.00 0.00 39.34 3.01
1928 1959 6.325028 AGCTCTATTGCTCACATTAGTAGGAA 59.675 38.462 0.00 0.00 39.34 3.36
1929 1960 5.835819 AGCTCTATTGCTCACATTAGTAGGA 59.164 40.000 0.00 0.00 39.34 2.94
1930 1961 6.095432 AGCTCTATTGCTCACATTAGTAGG 57.905 41.667 0.00 0.00 39.34 3.18
1931 1962 7.973388 GGATAGCTCTATTGCTCACATTAGTAG 59.027 40.741 0.00 0.00 42.97 2.57
1932 1963 7.093727 GGGATAGCTCTATTGCTCACATTAGTA 60.094 40.741 0.00 0.00 42.97 1.82
1933 1964 6.295575 GGGATAGCTCTATTGCTCACATTAGT 60.296 42.308 0.00 0.00 42.97 2.24
1934 1965 6.070881 AGGGATAGCTCTATTGCTCACATTAG 60.071 42.308 0.00 0.00 42.97 1.73
1935 1966 5.782331 AGGGATAGCTCTATTGCTCACATTA 59.218 40.000 0.00 0.00 42.97 1.90
1936 1967 4.596643 AGGGATAGCTCTATTGCTCACATT 59.403 41.667 0.00 0.00 42.97 2.71
1937 1968 4.166539 AGGGATAGCTCTATTGCTCACAT 58.833 43.478 0.00 0.00 42.97 3.21
1938 1969 3.581101 AGGGATAGCTCTATTGCTCACA 58.419 45.455 0.00 0.00 42.97 3.58
1939 1970 4.615588 AAGGGATAGCTCTATTGCTCAC 57.384 45.455 0.00 0.00 42.97 3.51
1940 1971 4.655649 TGAAAGGGATAGCTCTATTGCTCA 59.344 41.667 0.00 0.00 42.97 4.26
1941 1972 4.994217 GTGAAAGGGATAGCTCTATTGCTC 59.006 45.833 0.00 0.00 42.97 4.26
1942 1973 4.502259 CGTGAAAGGGATAGCTCTATTGCT 60.502 45.833 0.00 0.00 46.11 3.91
1943 1974 3.743396 CGTGAAAGGGATAGCTCTATTGC 59.257 47.826 0.00 0.00 0.00 3.56
1944 1975 4.950050 ACGTGAAAGGGATAGCTCTATTG 58.050 43.478 0.00 0.00 0.00 1.90
1945 1976 5.244178 CCTACGTGAAAGGGATAGCTCTATT 59.756 44.000 0.00 0.00 0.00 1.73
1946 1977 4.767928 CCTACGTGAAAGGGATAGCTCTAT 59.232 45.833 0.00 0.00 0.00 1.98
1947 1978 4.141321 TCCTACGTGAAAGGGATAGCTCTA 60.141 45.833 0.00 0.00 34.66 2.43
1948 1979 2.959707 CCTACGTGAAAGGGATAGCTCT 59.040 50.000 0.00 0.00 0.00 4.09
1949 1980 2.957006 TCCTACGTGAAAGGGATAGCTC 59.043 50.000 0.00 0.00 34.66 4.09
1950 1981 2.959707 CTCCTACGTGAAAGGGATAGCT 59.040 50.000 0.00 0.00 34.66 3.32
1951 1982 2.957006 TCTCCTACGTGAAAGGGATAGC 59.043 50.000 0.00 0.00 34.66 2.97
1952 1983 4.218852 GGATCTCCTACGTGAAAGGGATAG 59.781 50.000 0.00 0.00 34.66 2.08
1953 1984 4.140994 AGGATCTCCTACGTGAAAGGGATA 60.141 45.833 0.00 0.00 46.48 2.59
1954 1985 2.966516 GGATCTCCTACGTGAAAGGGAT 59.033 50.000 0.00 2.56 34.66 3.85
1955 1986 2.024273 AGGATCTCCTACGTGAAAGGGA 60.024 50.000 0.00 0.00 46.48 4.20
1956 1987 2.389715 AGGATCTCCTACGTGAAAGGG 58.610 52.381 0.00 0.00 46.48 3.95
1968 1999 4.381505 GCATAGAAGGAATCGAGGATCTCC 60.382 50.000 0.00 0.00 0.00 3.71
1969 2000 4.462483 AGCATAGAAGGAATCGAGGATCTC 59.538 45.833 0.00 0.00 0.00 2.75
1970 2001 4.220382 CAGCATAGAAGGAATCGAGGATCT 59.780 45.833 0.00 0.00 0.00 2.75
1995 2026 6.012945 AGAGGAGGGATTTATGAATTAGAGCC 60.013 42.308 0.00 0.00 0.00 4.70
2000 2031 8.337118 AGAACAGAGGAGGGATTTATGAATTA 57.663 34.615 0.00 0.00 0.00 1.40
2006 2037 8.049721 CAGTTTAAGAACAGAGGAGGGATTTAT 58.950 37.037 0.00 0.00 38.26 1.40
2017 2048 6.631636 GGCGTTAAAACAGTTTAAGAACAGAG 59.368 38.462 0.00 0.00 39.34 3.35
2043 2075 3.304391 GGTGCGACTCAAGCAATTGTTTA 60.304 43.478 7.25 0.00 46.97 2.01
2044 2076 2.543653 GGTGCGACTCAAGCAATTGTTT 60.544 45.455 7.40 4.26 46.97 2.83
2058 2091 0.527565 ATGCAATTTCAGGGTGCGAC 59.472 50.000 0.00 0.00 41.27 5.19
2064 2097 7.439381 AGCAGAAATAATATGCAATTTCAGGG 58.561 34.615 18.91 11.39 42.14 4.45
2084 2117 1.276421 GGCAGAACTGAAGGTAGCAGA 59.724 52.381 5.97 0.00 36.86 4.26
2085 2118 1.677217 GGGCAGAACTGAAGGTAGCAG 60.677 57.143 5.97 0.00 39.26 4.24
2163 2410 7.189512 CAGAATTGCTTGTTTAGTGCTATACC 58.810 38.462 0.00 0.00 0.00 2.73
2204 2455 3.413846 TTGCAGAAGAATGAGCAGACT 57.586 42.857 0.00 0.00 38.35 3.24
2206 2457 3.939592 CAGATTGCAGAAGAATGAGCAGA 59.060 43.478 0.00 0.00 38.35 4.26
2207 2458 3.690139 ACAGATTGCAGAAGAATGAGCAG 59.310 43.478 0.00 0.00 38.35 4.24
2209 2460 3.181499 CCACAGATTGCAGAAGAATGAGC 60.181 47.826 0.00 0.00 0.00 4.26
2210 2461 4.259356 TCCACAGATTGCAGAAGAATGAG 58.741 43.478 0.00 0.00 0.00 2.90
2211 2462 4.259356 CTCCACAGATTGCAGAAGAATGA 58.741 43.478 0.00 0.00 0.00 2.57
2212 2463 4.008330 ACTCCACAGATTGCAGAAGAATG 58.992 43.478 0.00 0.00 0.00 2.67
2246 2497 2.006888 CGGAGTGTTGCAATACGGAAT 58.993 47.619 19.02 3.24 31.83 3.01
2254 2505 1.112315 AAATGGCCGGAGTGTTGCAA 61.112 50.000 5.05 0.00 0.00 4.08
2286 2537 2.462456 ACGCTGAGATTCATGTGTGT 57.538 45.000 0.00 0.00 0.00 3.72
2295 2546 1.082117 CGCCCGTTAACGCTGAGATT 61.082 55.000 22.43 0.00 38.18 2.40
2304 2555 1.152383 GAGCAGGATCGCCCGTTAAC 61.152 60.000 0.00 0.00 40.87 2.01
2463 2719 2.095969 CGCTTGCCGAACTAAACAATGA 60.096 45.455 0.00 0.00 40.02 2.57
2476 2732 1.196130 GCATCGATTTTCGCTTGCCG 61.196 55.000 0.00 0.00 40.39 5.69
2479 2735 4.520743 TTAGAGCATCGATTTTCGCTTG 57.479 40.909 9.11 0.00 42.67 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.