>input_sequence_78116
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---------------------------------------------------ATGGCTGGAGAGCAAGCGTTCCACCGGGG
AGGCGTGCACGGGGGCGGCAGCGCCATCGGGCCGGACTACATGCGGGCCATCCGCGGCGACGACGACTACTACGGCGGGC
ACGGCCAGGGCCACAACCAGCCGGCGGCCGTCACCCTCGCGAAGGGAGTGGCCGCGGCGGCGGCGGCGGGGTCGATGCTG
CTCCTGTCGGCCCTGACGCTGACGGGCACGGTGCTGGCGCTGATCGTGGCGACGCCGCTGCTGGTGCTCTTCAGCCCCGT
GCTGGTGCCCGCGGCCATCGCGGTGACGATGCTGACGGCCGGGTTCGTGTCGTCGGGGGCGTTCGGCGCGGCGGCGGTGG
GGGTGCTGGCGTGGATGTACAAGTACCTCTCGCACGGGACGTCCTCGCCGCCGGGGGCCGACACGGTGGACCACGCGGGC
GCGAAGCTGGACTCCAAGGCGCACGAGGTGAAGAACTGGGCGCAGCATCGCCTCGACCAGGCCCGAACGCCGTAG-----
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>chr5D_1_TraesCS5D01G188400
GAGTATGATGACGTCATGTTAAAAATAAGGTATTATTTCACACCTAGATAAGATACTATTTCCCATCTAGATGTGATGTG
AAATAGTTATCTCACATCTAAGTCTCATCACATGATCAAGGCTGTAATTTTGTGCAAATTTTGTTAGAATCCCGAAACAG
CAGCCAACGCCGACGATTTCGGGAGCAGTCACGTCCACTTTTCTCTAACTTAATTTAGGACTTACAGGTGTATCAACTTA
CAAGGCTACCCTTAAATTACAAGGCTACCAATTGAAGCTTACCCGCAAAAAAAGAAAATCAATTGAAGCTTAAAGAGAAC
AATATAATGTAGCACTCGAATTCAAACACCTGTTAAAACAGACTTTAAGGTTCGAAAATTATCGAGAAGCGAATAAGCAA
AACTTCTATGTGATACAGTATATAAGCAGAACTTCAGTTTTGACAGTAGGTCTGATGGCCTCTTATGTAATAGTGTTCCG
CCATGTGTAACTGCTTTTGTAATGAATGATGTAAGAATCTTAATTTACCAAATTAATATAGGAGGGTTTTCAAAAAGAAA
AAGGACCTCTATGTGAAAACTTGGAAAGCGGCATCCAGCTCCACTCCAGACTCGTGGGCCAGCAAGCCCACGGCCACACC
----------GACGTCAAGTTGGAACCCTGTCCTGCAGGCTGCTGGTGGAGCTCAGCGGCGCGGGGAAGGGTACTGCATT
CGCAACACGTAGGACGGGAGGACGCCGGGAGCCTGCAAGTTGGCACGTACGTGGCAAGGCTTGAGGCATCGCTATCCATG
CAGATCACGCCCCTCGCCACGTGCCCCAGGTATGCGGCCACATGTCCGAGACTCGCTCCACCGTCTTCGTCCACACTCTC
ACCCCCATCGCATCTTATATACCACGATCCATCTCGGCGAGAAACTCACCGCGCATTTGGCTATCGCATTTCTCAGGTGA
GCCTCAGGTTTCAGAGCAGCGAAGCTT-CAAGTGCGCATCTGGGTACCGGCATGGCTGGAGAGCAAGCGTTCCACCGGGG
AGGCGTGCACGGGGGCGGCAGCGCCATCGGGCCGGACTACATGCGGGCCATCCGCGGCGACGACGACTACTACGGCGGGC
ACGGCCAGGGCCACAACCAGCCGGCGGCCGTCACCCTCGCGAAGGGAGTGGCCGCGGCGGCGGCGGCGGGGTCGATGCTG
CTCCTGTCGGCCCTGACGCTGACGGGCACGGTGCTGGCGCTGATCGTGGCGACGCCGCTGCTGGTGCTCTTCAGCCCCGT
GCTGGTGCCCGCGGCCATCGCGGTGACGATGCTGACGGCCGGGTTCGTGTCGTCGGGGGCGTTCGGCGCGGCGGCGGTGG
GGGTGCTGGCGTGGATGTACAAGTACCTCTCGCACGGGACGTCCTCGCCGCCGGGGGCCGACACGGTGGACCACGCGGGC
GCGAAGCTGGACTCCAAGGCGCACGAGGTGAAGAACTGGGCGCAGCATCGCCTCGACCAGGCCCGAACGCCGTAGATGCG
TCGTCATTCGCCCTCCTATGCGTTACCAGTGTGTGCGTGTGTG--TGTGGATCGACGCCTCTATATGTACGGACGTGCCT
GCGAGCGGTGCTACTTAACACCGATGAATAATAAGCTGCATATCTGCTACTCATCCCCTCTGGAGAGGGAGTTAAGAATA
G--------ATCTCTTGTGCTTGTTCCTGTG---------CCGTCTACTTGCGCTGCTTCGTCTTCACCTGCAAGGACTT
CTGTGATTCGGAGTCCACGTCGTCCATATTACTGCCTTCTTTTTTCGGGGTTAAAAGGGATTTTCATTGCTCAATGGGGA
ACCAGGTCGTCCATACAAAGTTGGGGTACATCCGTAGGGCATGACCTCAACCAAACTGCAGTCCTAGCCTCTACGCGGAC
GGCCAAACGTGGCTAATCTATGACTAACAGAATTTTGATTCCTACTAATGTGAGCAATAGAGCTATCCCTTTCACGTAGG
AGATCCTCGATTCCTTCTATGCTGCGGCTCTAATTCATAAATCCCTCCTCTGTTCTT-AAACTGTTTTAACGCCTAAACA
ATT-GCTTGAGTCGCACCCTGAAATTGCATATTATTTCTGCTACCTTCAGTTCTGCCCTTACAAATGGCAGCACCCCACA
AGAACTA-------------------------------------------------------------------------
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------------------------------------------------------------ATTATACTTGCACTCG-AAC
ATATATTTTGGTATAGCACTAAACA----AGCAATTCTGCCCTGACAGTGGTGCAGTCTGCTCATTCTTCTGCAATCTGT
GGAGTTCATTTCTGCCATTCCGTATTGCAACACTCCGGCCATTTCTGTCCCCTACCACACACATGAATCTCAGCGTTAAC
GGGCGATCCTGCTCTCAGATGAACAG-AAAAATGTAAAC----ATGAACAGTAAAATGCAAAATAAATTTTGAAAAAGAA
AATTTGTAGTAGAATGTAAAATAATTTTTTATAAACAAAATTTGTTGTGACAAACATTGTTGAATGTTTCACATGTCTTC
ATTGTTTAGTTCGGCAAGCGAAAATCGATGCTCTAAAGA
>chr5A_567
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------CTCTAAGTGAAAATTTATAAAGCGGCATCCAGCTCAACTTCAGACGCGTGGGCCGGCAAGGCGACGGGCACACC
GTCGATGGAGGACGTCATTTTGAAACCCTGTCCTGCAGGCTGCTCGTCGAGCTCAGCGGCGC-GGGAAGGGTACTGCATT
CGCAACACGTAGGATGGGAGGACGCCGGGAGCCTGCAAGTTGGCACGTACGTGGCACGGCTTGAGGCATCGCTATCCATG
CAGATCACGCCCCTCGCCACGTGCCCCATGTATGCGGCCACATGTCCGAGACTCGCTCCACCGCCTTCGTCCACACTCTC
ACCCACATCGCATCTTATATACCACGATCCATCTCGGCGAGAAACCCACCGCGCATTTGGCTATCGCATTTCTCAGGTGA
GGCTCAGGTTCCGGAGTAGCGAAGCTT-CAAGTGCGCATCTGGGTACCGGCATGGCTGGAGAGCAGGCGTTCCACCGGGG
AGGCGTGCACGGAGGCGGCAGCGCCATCGGGCCGGACTACATGCGGGCCATCCGCGGCGACGACGACTACTACGGCGGGC
ACGGCCAGGGCCACAGCCAGCCGGCGGCCGTCACCCTCGCGAAGGGGGTGGCCGCGGCGGCGGCGGCGGGGTCGATGCTG
CTCCTGTCGGCCCTGACGCTGACGGGCACGGTGCTGGCGCTGATCGTGGCGACGCCGCTGCTGGTGCTCTTCAGCCCCGT
GCTGGTGCCCGCGGCCATCGCCGCCACGGTGCTGACGGCCGGGTTCGTCTCGTCGGGGGCGTTCGGCGCGGCGGCGGTGG
GGGTGCTGGCGTGGATGTACAAGTACCTGTCGCACGGGGCGTCCTCGCCGCCGGGGGCCGACACGGTGGACCACGCGGGC
GCGAAGCTGGACTCCAAGGCGCACGAGGTGAAGAACTGGGCGCAGCATCGCCTCGACCAGGCACGAACGCCGTAGACGTG
TCGTCATTTGCCCTCCTATGCGTCACCA----------GTGTG--TGTGGATCGACGCCTCTATATGTACGGACGTGCCC
GCGAGCGGTGCTACTTACCACCGATGAATAATAAGCTGCATATCTCCTCTGGA----------AGAGGGAGTTAAAAATA
GTACTGTAGATCTCTTCTGCTTGTTCCTTGTGCGGTTGTTCCGTCCACTTGCGCTGCTTCGTCTTCACCTGCAAGGACTT
CTG-----------------------------------------------------------------------------
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>chr5B_641
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----------GACGTCATGTTGAAACCCTGTCCTGCAGGCTGCTCGTCGAGCTCAGCGGCGC-GGAAAGGGTACTGCATT
CGCGACACGTAGGACGAGAGGACGCCGGGAGCCTGCAAGTTGGCACGTACGTGGTATGGATTGAGGCATCGCTATCCATG
CAGATCGCGCCCCTCGACACGTGCCCGAGGTATGCGGCCACATGTCCGAGACTCGCTCCACCGCCTTCGTCCACACTCTC
GCCCACATCGCATCTTATATACCACGATCCATCTCGCCGAGAAACCCACGGCGCATTTGGCTATCGCATTTCTCAGGTGA
GGCTCAGGTTTCGGAGCAGCGAAGCTTTCAAGTGTGCATCTGCCTACAGGCATGGCTGGAGAGCAAGCGTTCCACCGGGG
AGGCGTGCACGGAGGCGGCAGCGCCATCGGGCCGGACTACATGCGGGCCATCCGCGGCGACGACGACTACTACGGCGGGC
ACGGCCAGGGCTACAACCAGCCGGCGACCGTCACCCTCGCGAAGGGGGTGGCCGCGGCGGCGGCGGCCGGGTCGATGCTG
CTCCTGTCGGCCCTGACGCTGACGGGCACGGTGCTGGCGCTCATCGTGGCGACGCCGCTGCTGGTGCTCTTCAGCCCCGT
GCTGGTGCCCGCGGCCATAGCCGTCACGATGCTGACGGCCGGGTTCGTGTCGTCGGGGGCGTTCGGCGCGGCGGCGGTGG
GCGTGCTGGCGTGGATGTACAAGTATCTGTCGCACGGCGCATCCTCGCCGCCGGGGGCCGACACGGTGGACCACGCCGGT
GCGAAGCTGGACTCCAAGGCGCACGAGGTGAAGAACTGGGCGCAGCATCGCCTCGACCAGGCACGAACGCCGTAGACATG
TTGTCATTTGCCCTCCTATGCGTTACCA----------GTGTGTGTGTGGATCGACGCCTCTATATGTAGGGACGTGCCT
GCGAGCGGTGCTACTTACCCCCGATGAATAATAAGCTGCATATCTGCTACTCATCTCCTCTGGAGAGGGAGTTAAGAATA
G--------ATCTCTTGTGTTGGTTCTTGTG---------CCGTCTACTTGCGCTGCTTCGTCTTCACCTTCAAGGACTT
C--TGATTTGGAGTCCACGTCGTTCATATTACTGCCTTGAACACGAT---------------------------------
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-GATCCTCGATTCCTTCTATGCTGCCGCTCCAATTCCTAAATCCCTCTTCTGTTCTTAAAACTGTTTTAACGCCCCAACA
ATTTGCTTGAATCGCA-CCTGAAATTGCATATTATTCGTGCTACCTTCAGTTCCGCCCTTACAAATGGCAGCACCCCACA
AGAACTACTCCCTCCGTTCGGAATTTGTCAAAAAAAATGAATGTATCTACAACTACTCCCTCCGTACGGAATTACTTTCA
TAAAAATGAATGTATCTAGAACTAAAATACATCTAGATACATATTTTGAACAAAGAAAATAGTAATTATATTTACGAGTA
ATTCCGAACAGAGAAAATAGTAATTATATTTACGAGTAATTCTAAACGGAGGGAGTAGTAATTATACTTGCACTCGGAAC
ATATATTTTTGTATAGCAGTAAACAAACCAGCAATTCTGCCCTGACAGTGGTGCTGCTT----ATTCTTCTGCAATCTGT
GGAGTTCATTTCTGCCCTTCCGTACTGCAACACTCCGGCCATTTCTGTCCCCTACCCCACACATGGATCTCAGCTTTAAC
GGGCGATCCTGCTCTCAGATGAACAGTAAAAATGTAAACTCAGATGAACAGTAAAACATACAATAAATTTTAAAAAATAG
--------------------------------------AATTTGTGGTGACAAACATTGTTGAATGTTTCACATGTCTGC
ATTGTTTCAGTGGGTAAGGGGAAATCGATGCTCTAAAG-
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----S-------S--SS-----------------S---S-----S--------S-----S-S----S------
-----------------S----S---------------------S--S--------------S-----------------
--------------------------------------------------------S-----------------------
---------------------------------------------------------------S----------------
----S----------------------------------------S----------------------------------
-S----------S-------------------------------------------------------------------
------------S-------------------------------------------------------------------
----------------------------------------------S---------------------------------
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---------------------S--S-------------------------------------------------------
----------------------------S---------S-----------------------------------------
--------------------------------------------------------------S-------------S-S-
--------S-------------------SSSSSSSSSS------------------------------------------
-----------------S-------------------------------------S------------------------
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--------S--------------S--------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S------------------------S----S-----S----------S--------------------------SS----
----------S-----S-------------------SS---------------S--------------------------
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---------S--------S-----------------------------------S-SS-SSSS-----------------
----------------S-------S-------------------------------S--------S--------S-----
--------------------------------------------------------SSS-S----------S-----S-S
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S--------------------------------S-
-------SSS-S--S---S-S-----------------S
>forward_495
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---------------------------------------------------------------------------TTCCG
CCATGTGTAACTGCT-----------------------------------------------------------------
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>reverse_1869
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----------------------------CATCCGTAGGGCATGACCTC--------------------------------
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