Multiple sequence alignment - TraesCS5D01G154900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G154900 chr5D 100.000 3452 0 0 1 3452 242971467 242974918 0.000000e+00 6375.0
1 TraesCS5D01G154900 chr5D 93.472 720 39 5 2740 3452 370461505 370460787 0.000000e+00 1062.0
2 TraesCS5D01G154900 chr5D 91.908 173 12 1 637 807 472804965 472804793 1.240000e-59 241.0
3 TraesCS5D01G154900 chr5B 94.302 1913 82 16 822 2720 255407457 255405558 0.000000e+00 2904.0
4 TraesCS5D01G154900 chr5B 83.495 103 13 2 346 444 255407630 255407528 3.670000e-15 93.5
5 TraesCS5D01G154900 chr5B 90.323 62 4 2 227 286 255408287 255408226 2.860000e-11 80.5
6 TraesCS5D01G154900 chr5A 95.167 1800 65 13 951 2750 309020076 309018299 0.000000e+00 2822.0
7 TraesCS5D01G154900 chr5A 87.640 178 17 4 471 645 31444004 31444179 5.840000e-48 202.0
8 TraesCS5D01G154900 chr5A 89.535 86 5 3 954 1039 309020446 309020365 4.710000e-19 106.0
9 TraesCS5D01G154900 chr6A 93.655 725 38 4 2736 3452 78006841 78006117 0.000000e+00 1077.0
10 TraesCS5D01G154900 chr1D 93.741 719 38 5 2735 3450 78119160 78118446 0.000000e+00 1072.0
11 TraesCS5D01G154900 chr2D 93.508 724 35 8 2736 3452 627523466 627524184 0.000000e+00 1066.0
12 TraesCS5D01G154900 chr2D 88.506 174 16 3 471 641 435071216 435071388 1.260000e-49 207.0
13 TraesCS5D01G154900 chr2A 93.463 719 40 4 2736 3452 38396097 38396810 0.000000e+00 1061.0
14 TraesCS5D01G154900 chr3D 93.232 724 39 6 2738 3452 89805866 89806588 0.000000e+00 1057.0
15 TraesCS5D01G154900 chr3D 88.506 174 16 3 471 641 536423577 536423749 1.260000e-49 207.0
16 TraesCS5D01G154900 chr3D 87.640 178 17 4 471 645 603709021 603709196 5.840000e-48 202.0
17 TraesCS5D01G154900 chr6D 93.204 721 43 4 2737 3452 140088245 140088964 0.000000e+00 1055.0
18 TraesCS5D01G154900 chr6D 86.702 188 19 6 471 655 258781004 258780820 1.620000e-48 204.0
19 TraesCS5D01G154900 chr7D 93.185 719 41 6 2737 3452 435525172 435524459 0.000000e+00 1050.0
20 TraesCS5D01G154900 chr7D 91.429 175 13 1 637 809 445954060 445953886 4.450000e-59 239.0
21 TraesCS5D01G154900 chr7D 84.783 184 22 6 475 655 183233357 183233177 2.740000e-41 180.0
22 TraesCS5D01G154900 chr7D 77.679 112 19 6 35 141 579144571 579144461 2.880000e-06 63.9
23 TraesCS5D01G154900 chr7A 93.065 721 42 6 2738 3452 571320489 571321207 0.000000e+00 1048.0
24 TraesCS5D01G154900 chr7B 92.486 173 11 2 637 807 2765495 2765323 2.660000e-61 246.0
25 TraesCS5D01G154900 chr7B 88.439 173 18 1 471 641 645602296 645602468 1.260000e-49 207.0
26 TraesCS5D01G154900 chr6B 92.486 173 11 1 637 807 309685708 309685880 2.660000e-61 246.0
27 TraesCS5D01G154900 chr6B 91.908 173 12 1 637 807 152386045 152385873 1.240000e-59 241.0
28 TraesCS5D01G154900 chr6B 91.908 173 12 1 637 807 688594621 688594793 1.240000e-59 241.0
29 TraesCS5D01G154900 chr6B 87.571 177 19 2 471 645 688594586 688594761 5.840000e-48 202.0
30 TraesCS5D01G154900 chr3A 92.000 175 12 1 637 809 707996335 707996161 9.570000e-61 244.0
31 TraesCS5D01G154900 chr3A 91.908 173 12 1 637 807 12408959 12408787 1.240000e-59 241.0
32 TraesCS5D01G154900 chr4A 91.908 173 12 1 637 807 121496048 121496220 1.240000e-59 241.0
33 TraesCS5D01G154900 chr4A 88.372 172 18 1 471 640 739765717 739765546 4.520000e-49 206.0
34 TraesCS5D01G154900 chr1A 87.640 178 16 5 471 644 31798478 31798653 5.840000e-48 202.0
35 TraesCS5D01G154900 chr4D 85.638 188 21 5 471 655 63811924 63811740 3.520000e-45 193.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G154900 chr5D 242971467 242974918 3451 False 6375 6375 100.000000 1 3452 1 chr5D.!!$F1 3451
1 TraesCS5D01G154900 chr5D 370460787 370461505 718 True 1062 1062 93.472000 2740 3452 1 chr5D.!!$R1 712
2 TraesCS5D01G154900 chr5B 255405558 255408287 2729 True 1026 2904 89.373333 227 2720 3 chr5B.!!$R1 2493
3 TraesCS5D01G154900 chr5A 309018299 309020446 2147 True 1464 2822 92.351000 951 2750 2 chr5A.!!$R1 1799
4 TraesCS5D01G154900 chr6A 78006117 78006841 724 True 1077 1077 93.655000 2736 3452 1 chr6A.!!$R1 716
5 TraesCS5D01G154900 chr1D 78118446 78119160 714 True 1072 1072 93.741000 2735 3450 1 chr1D.!!$R1 715
6 TraesCS5D01G154900 chr2D 627523466 627524184 718 False 1066 1066 93.508000 2736 3452 1 chr2D.!!$F2 716
7 TraesCS5D01G154900 chr2A 38396097 38396810 713 False 1061 1061 93.463000 2736 3452 1 chr2A.!!$F1 716
8 TraesCS5D01G154900 chr3D 89805866 89806588 722 False 1057 1057 93.232000 2738 3452 1 chr3D.!!$F1 714
9 TraesCS5D01G154900 chr6D 140088245 140088964 719 False 1055 1055 93.204000 2737 3452 1 chr6D.!!$F1 715
10 TraesCS5D01G154900 chr7D 435524459 435525172 713 True 1050 1050 93.185000 2737 3452 1 chr7D.!!$R2 715
11 TraesCS5D01G154900 chr7A 571320489 571321207 718 False 1048 1048 93.065000 2738 3452 1 chr7A.!!$F1 714

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.031314 CCCTCCGATGACGTGAGATG 59.969 60.0 0.0 0.0 38.28 2.90 F
28 29 0.101219 CTCCGATGACGTGAGATGCA 59.899 55.0 0.0 0.0 38.28 3.96 F
29 30 0.179137 TCCGATGACGTGAGATGCAC 60.179 55.0 0.0 0.0 44.21 4.57 F
952 1547 0.318107 GCAATCAAATCCGCCATCCG 60.318 55.0 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1293 2262 2.431683 GTGGTGGAGGAAGCAGCA 59.568 61.111 0.00 0.00 0.00 4.41 R
2091 3060 1.182667 CCACCACGTAGAGATGGTCA 58.817 55.000 0.00 0.00 46.62 4.02 R
2172 3141 4.463879 CCGCCACCAGCTCTGAGG 62.464 72.222 6.83 1.69 40.39 3.86 R
2716 3685 0.032678 ACAGTCCTCGCACAACAGAG 59.967 55.000 0.00 0.00 0.00 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 2.910360 CCACATGCCCTCCGATGA 59.090 61.111 0.00 0.00 0.00 2.92
18 19 1.524621 CCACATGCCCTCCGATGAC 60.525 63.158 0.00 0.00 0.00 3.06
19 20 1.884464 CACATGCCCTCCGATGACG 60.884 63.158 0.00 0.00 39.43 4.35
20 21 2.359169 ACATGCCCTCCGATGACGT 61.359 57.895 0.00 0.00 37.88 4.34
21 22 1.884464 CATGCCCTCCGATGACGTG 60.884 63.158 0.00 0.00 37.88 4.49
22 23 2.058001 ATGCCCTCCGATGACGTGA 61.058 57.895 0.00 0.00 37.88 4.35
23 24 2.021068 ATGCCCTCCGATGACGTGAG 62.021 60.000 0.00 0.00 36.94 3.51
24 25 2.415608 GCCCTCCGATGACGTGAGA 61.416 63.158 0.00 0.00 38.28 3.27
25 26 1.739338 GCCCTCCGATGACGTGAGAT 61.739 60.000 0.00 0.00 38.28 2.75
26 27 0.031314 CCCTCCGATGACGTGAGATG 59.969 60.000 0.00 0.00 38.28 2.90
27 28 0.596083 CCTCCGATGACGTGAGATGC 60.596 60.000 0.00 0.00 38.28 3.91
28 29 0.101219 CTCCGATGACGTGAGATGCA 59.899 55.000 0.00 0.00 38.28 3.96
29 30 0.179137 TCCGATGACGTGAGATGCAC 60.179 55.000 0.00 0.00 44.21 4.57
36 37 3.578456 GTGAGATGCACAACCGGG 58.422 61.111 6.32 0.00 46.91 5.73
37 38 2.040544 GTGAGATGCACAACCGGGG 61.041 63.158 6.32 0.00 46.91 5.73
38 39 3.134127 GAGATGCACAACCGGGGC 61.134 66.667 6.32 4.37 0.00 5.80
46 47 3.708544 CAACCGGGGCGAGGGTTA 61.709 66.667 6.32 0.00 44.46 2.85
47 48 3.396570 AACCGGGGCGAGGGTTAG 61.397 66.667 6.32 0.00 44.44 2.34
52 53 4.222847 GGGCGAGGGTTAGGCGAG 62.223 72.222 0.00 0.00 0.00 5.03
53 54 4.222847 GGCGAGGGTTAGGCGAGG 62.223 72.222 0.00 0.00 0.00 4.63
54 55 3.145551 GCGAGGGTTAGGCGAGGA 61.146 66.667 0.00 0.00 0.00 3.71
55 56 3.121019 CGAGGGTTAGGCGAGGAG 58.879 66.667 0.00 0.00 0.00 3.69
56 57 1.453379 CGAGGGTTAGGCGAGGAGA 60.453 63.158 0.00 0.00 0.00 3.71
57 58 1.035932 CGAGGGTTAGGCGAGGAGAA 61.036 60.000 0.00 0.00 0.00 2.87
58 59 0.460722 GAGGGTTAGGCGAGGAGAAC 59.539 60.000 0.00 0.00 0.00 3.01
59 60 0.976590 AGGGTTAGGCGAGGAGAACC 60.977 60.000 0.00 0.00 40.58 3.62
73 74 4.833390 AGGAGAACCTTATTCCACTTTCG 58.167 43.478 0.00 0.00 45.36 3.46
74 75 4.530946 AGGAGAACCTTATTCCACTTTCGA 59.469 41.667 0.00 0.00 45.36 3.71
75 76 4.630505 GGAGAACCTTATTCCACTTTCGAC 59.369 45.833 0.00 0.00 0.00 4.20
76 77 4.243270 AGAACCTTATTCCACTTTCGACG 58.757 43.478 0.00 0.00 0.00 5.12
77 78 3.672767 ACCTTATTCCACTTTCGACGT 57.327 42.857 0.00 0.00 0.00 4.34
78 79 3.582780 ACCTTATTCCACTTTCGACGTC 58.417 45.455 5.18 5.18 0.00 4.34
79 80 2.597305 CCTTATTCCACTTTCGACGTCG 59.403 50.000 31.30 31.30 41.45 5.12
80 81 1.621107 TATTCCACTTTCGACGTCGC 58.379 50.000 32.19 0.00 39.60 5.19
81 82 0.319211 ATTCCACTTTCGACGTCGCA 60.319 50.000 32.19 20.69 39.60 5.10
82 83 0.937699 TTCCACTTTCGACGTCGCAG 60.938 55.000 32.19 28.64 39.60 5.18
83 84 2.465920 CACTTTCGACGTCGCAGC 59.534 61.111 32.19 0.00 39.60 5.25
84 85 2.733593 ACTTTCGACGTCGCAGCC 60.734 61.111 32.19 0.00 39.60 4.85
85 86 2.430921 CTTTCGACGTCGCAGCCT 60.431 61.111 32.19 0.00 39.60 4.58
86 87 2.022129 CTTTCGACGTCGCAGCCTT 61.022 57.895 32.19 0.00 39.60 4.35
87 88 2.215478 CTTTCGACGTCGCAGCCTTG 62.215 60.000 32.19 13.48 39.60 3.61
96 97 3.458653 GCAGCCTTGCCTTTCCAA 58.541 55.556 0.00 0.00 44.74 3.53
97 98 1.291272 GCAGCCTTGCCTTTCCAAG 59.709 57.895 0.00 0.00 44.74 3.61
98 99 1.291272 CAGCCTTGCCTTTCCAAGC 59.709 57.895 0.00 0.00 40.62 4.01
99 100 1.152483 AGCCTTGCCTTTCCAAGCA 60.152 52.632 0.00 0.00 40.62 3.91
100 101 1.183676 AGCCTTGCCTTTCCAAGCAG 61.184 55.000 0.00 0.00 40.62 4.24
101 102 1.969862 CCTTGCCTTTCCAAGCAGG 59.030 57.895 0.00 0.00 40.62 4.85
112 113 3.788227 TCCAAGCAGGACACAAACTAT 57.212 42.857 0.00 0.00 43.07 2.12
113 114 4.901197 TCCAAGCAGGACACAAACTATA 57.099 40.909 0.00 0.00 43.07 1.31
114 115 5.235850 TCCAAGCAGGACACAAACTATAA 57.764 39.130 0.00 0.00 43.07 0.98
115 116 5.626142 TCCAAGCAGGACACAAACTATAAA 58.374 37.500 0.00 0.00 43.07 1.40
116 117 5.472137 TCCAAGCAGGACACAAACTATAAAC 59.528 40.000 0.00 0.00 43.07 2.01
117 118 5.240623 CCAAGCAGGACACAAACTATAAACA 59.759 40.000 0.00 0.00 41.22 2.83
118 119 6.238897 CCAAGCAGGACACAAACTATAAACAA 60.239 38.462 0.00 0.00 41.22 2.83
119 120 6.952773 AGCAGGACACAAACTATAAACAAA 57.047 33.333 0.00 0.00 0.00 2.83
120 121 6.735130 AGCAGGACACAAACTATAAACAAAC 58.265 36.000 0.00 0.00 0.00 2.93
121 122 6.546034 AGCAGGACACAAACTATAAACAAACT 59.454 34.615 0.00 0.00 0.00 2.66
122 123 6.856426 GCAGGACACAAACTATAAACAAACTC 59.144 38.462 0.00 0.00 0.00 3.01
123 124 7.468084 GCAGGACACAAACTATAAACAAACTCA 60.468 37.037 0.00 0.00 0.00 3.41
124 125 8.402472 CAGGACACAAACTATAAACAAACTCAA 58.598 33.333 0.00 0.00 0.00 3.02
125 126 8.962679 AGGACACAAACTATAAACAAACTCAAA 58.037 29.630 0.00 0.00 0.00 2.69
126 127 9.575783 GGACACAAACTATAAACAAACTCAAAA 57.424 29.630 0.00 0.00 0.00 2.44
141 142 9.078753 ACAAACTCAAAATAACACCTAAAAACG 57.921 29.630 0.00 0.00 0.00 3.60
142 143 9.291664 CAAACTCAAAATAACACCTAAAAACGA 57.708 29.630 0.00 0.00 0.00 3.85
143 144 9.857957 AAACTCAAAATAACACCTAAAAACGAA 57.142 25.926 0.00 0.00 0.00 3.85
144 145 9.511144 AACTCAAAATAACACCTAAAAACGAAG 57.489 29.630 0.00 0.00 0.00 3.79
145 146 8.132995 ACTCAAAATAACACCTAAAAACGAAGG 58.867 33.333 0.00 0.00 38.93 3.46
146 147 8.223177 TCAAAATAACACCTAAAAACGAAGGA 57.777 30.769 0.00 0.00 36.66 3.36
147 148 8.347035 TCAAAATAACACCTAAAAACGAAGGAG 58.653 33.333 0.00 0.00 36.66 3.69
148 149 8.347035 CAAAATAACACCTAAAAACGAAGGAGA 58.653 33.333 0.00 0.00 36.66 3.71
149 150 8.631480 AAATAACACCTAAAAACGAAGGAGAT 57.369 30.769 0.00 0.00 36.66 2.75
150 151 5.941948 AACACCTAAAAACGAAGGAGATG 57.058 39.130 0.00 0.00 36.66 2.90
151 152 3.751698 ACACCTAAAAACGAAGGAGATGC 59.248 43.478 0.00 0.00 36.66 3.91
152 153 3.127030 CACCTAAAAACGAAGGAGATGCC 59.873 47.826 0.00 0.00 36.66 4.40
153 154 2.683362 CCTAAAAACGAAGGAGATGCCC 59.317 50.000 0.00 0.00 37.37 5.36
154 155 2.586648 AAAAACGAAGGAGATGCCCT 57.413 45.000 0.00 0.00 38.42 5.19
159 160 4.153957 AAGGAGATGCCCTTCCGT 57.846 55.556 0.00 0.00 42.62 4.69
160 161 1.908483 AAGGAGATGCCCTTCCGTC 59.092 57.895 0.00 0.00 42.62 4.79
161 162 0.909610 AAGGAGATGCCCTTCCGTCA 60.910 55.000 0.00 0.00 42.62 4.35
162 163 1.144936 GGAGATGCCCTTCCGTCAG 59.855 63.158 0.00 0.00 0.00 3.51
163 164 1.522580 GAGATGCCCTTCCGTCAGC 60.523 63.158 0.00 0.00 0.00 4.26
164 165 2.244117 GAGATGCCCTTCCGTCAGCA 62.244 60.000 0.00 0.00 40.00 4.41
165 166 1.377202 GATGCCCTTCCGTCAGCAA 60.377 57.895 0.00 0.00 38.99 3.91
166 167 0.749454 GATGCCCTTCCGTCAGCAAT 60.749 55.000 0.00 0.00 38.99 3.56
167 168 1.033746 ATGCCCTTCCGTCAGCAATG 61.034 55.000 0.00 0.00 38.99 2.82
168 169 2.409870 GCCCTTCCGTCAGCAATGG 61.410 63.158 0.00 0.00 35.07 3.16
169 170 1.002134 CCCTTCCGTCAGCAATGGT 60.002 57.895 0.00 0.00 35.33 3.55
170 171 1.026718 CCCTTCCGTCAGCAATGGTC 61.027 60.000 0.00 0.00 35.33 4.02
171 172 1.361668 CCTTCCGTCAGCAATGGTCG 61.362 60.000 0.00 0.00 35.33 4.79
172 173 1.361668 CTTCCGTCAGCAATGGTCGG 61.362 60.000 6.27 6.27 42.12 4.79
173 174 2.047274 CCGTCAGCAATGGTCGGT 60.047 61.111 4.66 0.00 36.99 4.69
174 175 2.100631 CCGTCAGCAATGGTCGGTC 61.101 63.158 4.66 0.00 36.99 4.79
175 176 2.100631 CGTCAGCAATGGTCGGTCC 61.101 63.158 0.00 0.00 0.00 4.46
176 177 1.745489 GTCAGCAATGGTCGGTCCC 60.745 63.158 0.00 0.00 34.77 4.46
177 178 2.220586 TCAGCAATGGTCGGTCCCA 61.221 57.895 0.00 0.00 39.27 4.37
178 179 2.040544 CAGCAATGGTCGGTCCCAC 61.041 63.158 0.00 0.00 37.31 4.61
179 180 2.224159 AGCAATGGTCGGTCCCACT 61.224 57.895 0.00 0.00 37.31 4.00
180 181 2.040544 GCAATGGTCGGTCCCACTG 61.041 63.158 0.00 0.00 37.31 3.66
181 182 2.040544 CAATGGTCGGTCCCACTGC 61.041 63.158 0.00 0.00 37.31 4.40
182 183 3.605749 AATGGTCGGTCCCACTGCG 62.606 63.158 0.00 0.00 37.31 5.18
189 190 4.101448 GTCCCACTGCGCCTCCAT 62.101 66.667 4.18 0.00 0.00 3.41
190 191 4.100084 TCCCACTGCGCCTCCATG 62.100 66.667 4.18 0.00 0.00 3.66
191 192 4.100084 CCCACTGCGCCTCCATGA 62.100 66.667 4.18 0.00 0.00 3.07
192 193 2.191375 CCACTGCGCCTCCATGAT 59.809 61.111 4.18 0.00 0.00 2.45
193 194 1.890979 CCACTGCGCCTCCATGATC 60.891 63.158 4.18 0.00 0.00 2.92
194 195 1.145598 CACTGCGCCTCCATGATCT 59.854 57.895 4.18 0.00 0.00 2.75
195 196 0.390492 CACTGCGCCTCCATGATCTA 59.610 55.000 4.18 0.00 0.00 1.98
196 197 1.123077 ACTGCGCCTCCATGATCTAA 58.877 50.000 4.18 0.00 0.00 2.10
197 198 1.069823 ACTGCGCCTCCATGATCTAAG 59.930 52.381 4.18 0.00 0.00 2.18
198 199 1.342496 CTGCGCCTCCATGATCTAAGA 59.658 52.381 4.18 0.00 0.00 2.10
199 200 1.069204 TGCGCCTCCATGATCTAAGAC 59.931 52.381 4.18 0.00 0.00 3.01
200 201 1.606737 GCGCCTCCATGATCTAAGACC 60.607 57.143 0.00 0.00 0.00 3.85
201 202 1.688735 CGCCTCCATGATCTAAGACCA 59.311 52.381 0.00 0.00 0.00 4.02
202 203 2.546795 CGCCTCCATGATCTAAGACCAC 60.547 54.545 0.00 0.00 0.00 4.16
203 204 2.435805 GCCTCCATGATCTAAGACCACA 59.564 50.000 0.00 0.00 0.00 4.17
204 205 3.494048 GCCTCCATGATCTAAGACCACAG 60.494 52.174 0.00 0.00 0.00 3.66
205 206 3.963374 CCTCCATGATCTAAGACCACAGA 59.037 47.826 0.00 0.00 0.00 3.41
206 207 4.406972 CCTCCATGATCTAAGACCACAGAA 59.593 45.833 0.00 0.00 0.00 3.02
207 208 5.453057 CCTCCATGATCTAAGACCACAGAAG 60.453 48.000 0.00 0.00 0.00 2.85
208 209 5.272402 TCCATGATCTAAGACCACAGAAGA 58.728 41.667 0.00 0.00 0.00 2.87
209 210 5.127845 TCCATGATCTAAGACCACAGAAGAC 59.872 44.000 0.00 0.00 0.00 3.01
210 211 5.105187 CCATGATCTAAGACCACAGAAGACA 60.105 44.000 0.00 0.00 0.00 3.41
211 212 6.401394 CATGATCTAAGACCACAGAAGACAA 58.599 40.000 0.00 0.00 0.00 3.18
212 213 6.030548 TGATCTAAGACCACAGAAGACAAG 57.969 41.667 0.00 0.00 0.00 3.16
213 214 4.873746 TCTAAGACCACAGAAGACAAGG 57.126 45.455 0.00 0.00 0.00 3.61
214 215 2.262423 AAGACCACAGAAGACAAGGC 57.738 50.000 0.00 0.00 0.00 4.35
215 216 1.131638 AGACCACAGAAGACAAGGCA 58.868 50.000 0.00 0.00 0.00 4.75
216 217 1.071385 AGACCACAGAAGACAAGGCAG 59.929 52.381 0.00 0.00 0.00 4.85
217 218 1.070758 GACCACAGAAGACAAGGCAGA 59.929 52.381 0.00 0.00 0.00 4.26
218 219 1.701847 ACCACAGAAGACAAGGCAGAT 59.298 47.619 0.00 0.00 0.00 2.90
219 220 2.107204 ACCACAGAAGACAAGGCAGATT 59.893 45.455 0.00 0.00 0.00 2.40
220 221 2.486982 CCACAGAAGACAAGGCAGATTG 59.513 50.000 0.00 0.00 36.22 2.67
221 222 2.486982 CACAGAAGACAAGGCAGATTGG 59.513 50.000 0.00 0.00 34.36 3.16
222 223 1.471684 CAGAAGACAAGGCAGATTGGC 59.528 52.381 0.00 0.00 44.10 4.52
223 224 1.074405 AGAAGACAAGGCAGATTGGCA 59.926 47.619 5.41 0.00 46.46 4.92
224 225 1.471684 GAAGACAAGGCAGATTGGCAG 59.528 52.381 5.41 0.19 46.46 4.85
225 226 0.964358 AGACAAGGCAGATTGGCAGC 60.964 55.000 5.41 0.00 46.46 5.25
270 271 1.483827 CCTAGATGGCTGAGAGTTGCA 59.516 52.381 0.00 0.00 0.00 4.08
272 273 3.323115 CCTAGATGGCTGAGAGTTGCATA 59.677 47.826 0.00 0.00 0.00 3.14
273 274 3.191078 AGATGGCTGAGAGTTGCATAC 57.809 47.619 0.00 0.00 0.00 2.39
301 868 6.096423 GGAGGAGTAAAATATTTGGTCAACCC 59.904 42.308 0.39 0.00 34.29 4.11
304 871 6.183360 GGAGTAAAATATTTGGTCAACCCGAG 60.183 42.308 0.39 0.00 35.15 4.63
310 877 2.483014 TTGGTCAACCCGAGGTTATG 57.517 50.000 7.83 0.00 45.01 1.90
314 881 0.693622 TCAACCCGAGGTTATGCCAA 59.306 50.000 7.83 0.00 45.01 4.52
315 882 1.283613 TCAACCCGAGGTTATGCCAAT 59.716 47.619 7.83 0.00 45.01 3.16
320 887 2.099098 CCCGAGGTTATGCCAATTTCAC 59.901 50.000 0.00 0.00 40.61 3.18
321 888 2.752354 CCGAGGTTATGCCAATTTCACA 59.248 45.455 0.00 0.00 40.61 3.58
322 889 3.381272 CCGAGGTTATGCCAATTTCACAT 59.619 43.478 0.00 0.00 40.61 3.21
323 890 4.498009 CCGAGGTTATGCCAATTTCACATC 60.498 45.833 0.00 0.00 40.61 3.06
324 891 4.096231 CGAGGTTATGCCAATTTCACATCA 59.904 41.667 0.00 0.00 40.61 3.07
325 892 5.329035 AGGTTATGCCAATTTCACATCAC 57.671 39.130 0.00 0.00 40.61 3.06
326 893 5.018809 AGGTTATGCCAATTTCACATCACT 58.981 37.500 0.00 0.00 40.61 3.41
327 894 5.481473 AGGTTATGCCAATTTCACATCACTT 59.519 36.000 0.00 0.00 40.61 3.16
328 895 6.014327 AGGTTATGCCAATTTCACATCACTTT 60.014 34.615 0.00 0.00 40.61 2.66
329 896 6.650390 GGTTATGCCAATTTCACATCACTTTT 59.350 34.615 0.00 0.00 37.17 2.27
330 897 7.173047 GGTTATGCCAATTTCACATCACTTTTT 59.827 33.333 0.00 0.00 37.17 1.94
357 924 2.562298 GGAGCCAATTTCACATCACCAA 59.438 45.455 0.00 0.00 0.00 3.67
386 953 5.622770 AATCGTTATTTTTCGAGCAACCT 57.377 34.783 0.00 0.00 39.38 3.50
389 956 5.919196 TCGTTATTTTTCGAGCAACCTAAC 58.081 37.500 0.00 0.00 0.00 2.34
392 959 6.312487 GTTATTTTTCGAGCAACCTAACTCC 58.688 40.000 0.00 0.00 0.00 3.85
396 963 3.083122 TCGAGCAACCTAACTCCTAGT 57.917 47.619 0.00 0.00 0.00 2.57
397 964 2.753452 TCGAGCAACCTAACTCCTAGTG 59.247 50.000 0.00 0.00 0.00 2.74
398 965 2.492484 CGAGCAACCTAACTCCTAGTGT 59.508 50.000 0.00 0.00 0.00 3.55
399 966 3.427773 CGAGCAACCTAACTCCTAGTGTC 60.428 52.174 0.00 0.00 0.00 3.67
400 967 3.764972 GAGCAACCTAACTCCTAGTGTCT 59.235 47.826 0.00 0.00 0.00 3.41
401 968 4.161102 AGCAACCTAACTCCTAGTGTCTT 58.839 43.478 0.00 0.00 0.00 3.01
406 977 6.777213 ACCTAACTCCTAGTGTCTTACATG 57.223 41.667 0.00 0.00 0.00 3.21
428 999 4.684242 TGTTTGTAAGTGTCTGCGTCTATG 59.316 41.667 0.00 0.00 0.00 2.23
431 1002 4.878439 TGTAAGTGTCTGCGTCTATGTTT 58.122 39.130 0.00 0.00 0.00 2.83
433 1004 3.660501 AGTGTCTGCGTCTATGTTTCA 57.339 42.857 0.00 0.00 0.00 2.69
435 1006 3.057019 GTGTCTGCGTCTATGTTTCACA 58.943 45.455 0.00 0.00 0.00 3.58
437 1008 3.057019 GTCTGCGTCTATGTTTCACACA 58.943 45.455 0.00 0.00 40.71 3.72
452 1030 2.353269 TCACACACACACAAAATCCGAC 59.647 45.455 0.00 0.00 0.00 4.79
453 1031 1.673920 ACACACACACAAAATCCGACC 59.326 47.619 0.00 0.00 0.00 4.79
460 1038 4.261801 CACACAAAATCCGACCCTCTTAT 58.738 43.478 0.00 0.00 0.00 1.73
463 1041 5.126067 CACAAAATCCGACCCTCTTATCAT 58.874 41.667 0.00 0.00 0.00 2.45
464 1042 6.126883 ACACAAAATCCGACCCTCTTATCATA 60.127 38.462 0.00 0.00 0.00 2.15
465 1043 6.425114 CACAAAATCCGACCCTCTTATCATAG 59.575 42.308 0.00 0.00 0.00 2.23
466 1044 4.810191 AATCCGACCCTCTTATCATAGC 57.190 45.455 0.00 0.00 0.00 2.97
467 1045 3.238788 TCCGACCCTCTTATCATAGCA 57.761 47.619 0.00 0.00 0.00 3.49
468 1046 2.891580 TCCGACCCTCTTATCATAGCAC 59.108 50.000 0.00 0.00 0.00 4.40
469 1047 2.351835 CCGACCCTCTTATCATAGCACG 60.352 54.545 0.00 0.00 0.00 5.34
470 1048 2.678324 GACCCTCTTATCATAGCACGC 58.322 52.381 0.00 0.00 0.00 5.34
471 1049 2.297597 GACCCTCTTATCATAGCACGCT 59.702 50.000 0.00 0.00 0.00 5.07
472 1050 2.297597 ACCCTCTTATCATAGCACGCTC 59.702 50.000 0.00 0.00 0.00 5.03
473 1051 2.560542 CCCTCTTATCATAGCACGCTCT 59.439 50.000 0.00 0.00 0.00 4.09
474 1052 3.366883 CCCTCTTATCATAGCACGCTCTC 60.367 52.174 0.00 0.00 0.00 3.20
475 1053 3.505680 CCTCTTATCATAGCACGCTCTCT 59.494 47.826 0.00 0.00 0.00 3.10
476 1054 4.379394 CCTCTTATCATAGCACGCTCTCTC 60.379 50.000 0.00 0.00 0.00 3.20
477 1055 3.504134 TCTTATCATAGCACGCTCTCTCC 59.496 47.826 0.00 0.00 0.00 3.71
478 1056 1.697284 ATCATAGCACGCTCTCTCCA 58.303 50.000 0.00 0.00 0.00 3.86
479 1057 1.697284 TCATAGCACGCTCTCTCCAT 58.303 50.000 0.00 0.00 0.00 3.41
480 1058 2.034878 TCATAGCACGCTCTCTCCATT 58.965 47.619 0.00 0.00 0.00 3.16
481 1059 2.035193 TCATAGCACGCTCTCTCCATTC 59.965 50.000 0.00 0.00 0.00 2.67
482 1060 1.769026 TAGCACGCTCTCTCCATTCT 58.231 50.000 0.00 0.00 0.00 2.40
483 1061 0.901124 AGCACGCTCTCTCCATTCTT 59.099 50.000 0.00 0.00 0.00 2.52
484 1062 2.103373 AGCACGCTCTCTCCATTCTTA 58.897 47.619 0.00 0.00 0.00 2.10
485 1063 2.497675 AGCACGCTCTCTCCATTCTTAA 59.502 45.455 0.00 0.00 0.00 1.85
486 1064 3.055819 AGCACGCTCTCTCCATTCTTAAA 60.056 43.478 0.00 0.00 0.00 1.52
487 1065 3.684788 GCACGCTCTCTCCATTCTTAAAA 59.315 43.478 0.00 0.00 0.00 1.52
488 1066 4.154195 GCACGCTCTCTCCATTCTTAAAAA 59.846 41.667 0.00 0.00 0.00 1.94
514 1092 9.787435 AAGTGTACTTCCAACTTTATTGTATGA 57.213 29.630 0.00 0.00 29.98 2.15
515 1093 9.959721 AGTGTACTTCCAACTTTATTGTATGAT 57.040 29.630 0.00 0.00 0.00 2.45
517 1095 9.952030 TGTACTTCCAACTTTATTGTATGATCA 57.048 29.630 0.00 0.00 0.00 2.92
538 1116 8.236586 TGATCAAATTATCTCAAAGTTTGACCG 58.763 33.333 14.35 6.38 40.36 4.79
539 1117 7.737972 TCAAATTATCTCAAAGTTTGACCGA 57.262 32.000 14.35 11.50 34.82 4.69
540 1118 7.806690 TCAAATTATCTCAAAGTTTGACCGAG 58.193 34.615 14.35 5.32 34.82 4.63
541 1119 7.444183 TCAAATTATCTCAAAGTTTGACCGAGT 59.556 33.333 14.35 5.10 34.82 4.18
542 1120 7.745620 AATTATCTCAAAGTTTGACCGAGTT 57.254 32.000 14.35 4.91 35.46 3.01
543 1121 7.745620 ATTATCTCAAAGTTTGACCGAGTTT 57.254 32.000 14.35 0.45 35.46 2.66
544 1122 8.842358 ATTATCTCAAAGTTTGACCGAGTTTA 57.158 30.769 14.35 0.00 35.46 2.01
545 1123 8.842358 TTATCTCAAAGTTTGACCGAGTTTAT 57.158 30.769 14.35 0.00 35.46 1.40
546 1124 6.539649 TCTCAAAGTTTGACCGAGTTTATG 57.460 37.500 14.35 1.47 35.46 1.90
547 1125 6.285224 TCTCAAAGTTTGACCGAGTTTATGA 58.715 36.000 14.35 3.80 35.46 2.15
548 1126 6.764085 TCTCAAAGTTTGACCGAGTTTATGAA 59.236 34.615 14.35 0.00 35.46 2.57
549 1127 7.281324 TCTCAAAGTTTGACCGAGTTTATGAAA 59.719 33.333 14.35 0.00 35.46 2.69
550 1128 7.763356 TCAAAGTTTGACCGAGTTTATGAAAA 58.237 30.769 14.35 0.00 34.08 2.29
551 1129 8.244802 TCAAAGTTTGACCGAGTTTATGAAAAA 58.755 29.630 14.35 0.00 34.08 1.94
552 1130 8.531530 CAAAGTTTGACCGAGTTTATGAAAAAG 58.468 33.333 10.19 0.00 0.00 2.27
553 1131 7.329588 AGTTTGACCGAGTTTATGAAAAAGT 57.670 32.000 0.00 0.00 0.00 2.66
554 1132 8.441312 AGTTTGACCGAGTTTATGAAAAAGTA 57.559 30.769 0.00 0.00 0.00 2.24
555 1133 9.063615 AGTTTGACCGAGTTTATGAAAAAGTAT 57.936 29.630 0.00 0.00 0.00 2.12
559 1137 9.878667 TGACCGAGTTTATGAAAAAGTATATCA 57.121 29.630 0.00 0.00 0.00 2.15
628 1206 9.803130 CATGAATCTAATGCTACTAATTTGACG 57.197 33.333 0.00 0.00 0.00 4.35
629 1207 8.365399 TGAATCTAATGCTACTAATTTGACGG 57.635 34.615 0.00 0.00 0.00 4.79
630 1208 8.201464 TGAATCTAATGCTACTAATTTGACGGA 58.799 33.333 0.00 0.00 0.00 4.69
631 1209 8.958119 AATCTAATGCTACTAATTTGACGGAA 57.042 30.769 0.00 0.00 0.00 4.30
632 1210 9.561069 AATCTAATGCTACTAATTTGACGGAAT 57.439 29.630 0.00 0.00 0.00 3.01
637 1215 9.950680 AATGCTACTAATTTGACGGAATAAATG 57.049 29.630 0.00 0.00 0.00 2.32
638 1216 8.500753 TGCTACTAATTTGACGGAATAAATGT 57.499 30.769 0.00 0.00 0.00 2.71
639 1217 8.952278 TGCTACTAATTTGACGGAATAAATGTT 58.048 29.630 0.00 0.00 0.00 2.71
640 1218 9.221775 GCTACTAATTTGACGGAATAAATGTTG 57.778 33.333 0.00 0.00 0.00 3.33
645 1223 8.925161 AATTTGACGGAATAAATGTTGTATGG 57.075 30.769 0.00 0.00 0.00 2.74
646 1224 7.455641 TTTGACGGAATAAATGTTGTATGGT 57.544 32.000 0.00 0.00 0.00 3.55
647 1225 6.671614 TGACGGAATAAATGTTGTATGGTC 57.328 37.500 0.00 0.00 0.00 4.02
648 1226 6.174049 TGACGGAATAAATGTTGTATGGTCA 58.826 36.000 0.00 0.00 0.00 4.02
649 1227 6.655425 TGACGGAATAAATGTTGTATGGTCAA 59.345 34.615 0.00 0.00 0.00 3.18
650 1228 7.175119 TGACGGAATAAATGTTGTATGGTCAAA 59.825 33.333 0.00 0.00 0.00 2.69
651 1229 8.062065 ACGGAATAAATGTTGTATGGTCAAAT 57.938 30.769 0.00 0.00 0.00 2.32
652 1230 8.527810 ACGGAATAAATGTTGTATGGTCAAATT 58.472 29.630 0.00 0.00 0.00 1.82
662 1240 9.295825 TGTTGTATGGTCAAATTATCTCAAAGT 57.704 29.630 0.00 0.00 0.00 2.66
669 1247 7.781763 GTCAAATTATCTCAAAGTTTGACCG 57.218 36.000 14.35 6.38 46.32 4.79
670 1248 6.305638 GTCAAATTATCTCAAAGTTTGACCGC 59.694 38.462 14.35 0.00 46.32 5.68
671 1249 4.600012 ATTATCTCAAAGTTTGACCGCG 57.400 40.909 14.35 0.00 35.46 6.46
672 1250 1.878953 ATCTCAAAGTTTGACCGCGT 58.121 45.000 14.35 0.00 35.46 6.01
673 1251 1.658994 TCTCAAAGTTTGACCGCGTT 58.341 45.000 14.35 0.00 35.46 4.84
674 1252 2.011222 TCTCAAAGTTTGACCGCGTTT 58.989 42.857 14.35 0.00 35.46 3.60
675 1253 3.196463 TCTCAAAGTTTGACCGCGTTTA 58.804 40.909 14.35 0.00 35.46 2.01
676 1254 3.810941 TCTCAAAGTTTGACCGCGTTTAT 59.189 39.130 14.35 0.00 35.46 1.40
677 1255 3.879427 TCAAAGTTTGACCGCGTTTATG 58.121 40.909 14.35 0.00 34.08 1.90
678 1256 2.325509 AAGTTTGACCGCGTTTATGC 57.674 45.000 4.92 0.00 0.00 3.14
679 1257 1.231221 AGTTTGACCGCGTTTATGCA 58.769 45.000 4.92 0.00 34.15 3.96
680 1258 1.604755 AGTTTGACCGCGTTTATGCAA 59.395 42.857 4.92 0.00 34.15 4.08
681 1259 2.033550 AGTTTGACCGCGTTTATGCAAA 59.966 40.909 4.92 3.45 34.15 3.68
682 1260 2.776312 TTGACCGCGTTTATGCAAAA 57.224 40.000 4.92 0.00 34.15 2.44
683 1261 2.776312 TGACCGCGTTTATGCAAAAA 57.224 40.000 4.92 0.00 34.15 1.94
684 1262 3.290308 TGACCGCGTTTATGCAAAAAT 57.710 38.095 4.92 0.00 34.15 1.82
685 1263 4.421033 TGACCGCGTTTATGCAAAAATA 57.579 36.364 4.92 0.00 34.15 1.40
686 1264 4.987832 TGACCGCGTTTATGCAAAAATAT 58.012 34.783 4.92 0.00 34.15 1.28
687 1265 6.120378 TGACCGCGTTTATGCAAAAATATA 57.880 33.333 4.92 0.00 34.15 0.86
688 1266 6.730175 TGACCGCGTTTATGCAAAAATATAT 58.270 32.000 4.92 0.00 34.15 0.86
689 1267 6.853872 TGACCGCGTTTATGCAAAAATATATC 59.146 34.615 4.92 0.00 34.15 1.63
690 1268 6.730175 ACCGCGTTTATGCAAAAATATATCA 58.270 32.000 4.92 0.00 34.15 2.15
691 1269 7.197017 ACCGCGTTTATGCAAAAATATATCAA 58.803 30.769 4.92 0.00 34.15 2.57
692 1270 7.865385 ACCGCGTTTATGCAAAAATATATCAAT 59.135 29.630 4.92 0.00 34.15 2.57
693 1271 8.155294 CCGCGTTTATGCAAAAATATATCAATG 58.845 33.333 4.92 0.00 34.15 2.82
694 1272 8.689954 CGCGTTTATGCAAAAATATATCAATGT 58.310 29.630 0.00 0.00 34.15 2.71
759 1337 9.803130 CATGAATCTAATGCTACTAATTTGACG 57.197 33.333 0.00 0.00 0.00 4.35
760 1338 8.365399 TGAATCTAATGCTACTAATTTGACGG 57.635 34.615 0.00 0.00 0.00 4.79
761 1339 6.787085 ATCTAATGCTACTAATTTGACGGC 57.213 37.500 0.00 0.00 0.00 5.68
762 1340 5.666462 TCTAATGCTACTAATTTGACGGCA 58.334 37.500 0.00 0.00 0.00 5.69
763 1341 6.288294 TCTAATGCTACTAATTTGACGGCAT 58.712 36.000 0.00 10.67 40.04 4.40
764 1342 7.438564 TCTAATGCTACTAATTTGACGGCATA 58.561 34.615 0.00 0.00 37.85 3.14
765 1343 6.935741 AATGCTACTAATTTGACGGCATAA 57.064 33.333 0.00 0.00 37.85 1.90
766 1344 6.935741 ATGCTACTAATTTGACGGCATAAA 57.064 33.333 0.00 0.00 37.20 1.40
767 1345 6.935741 TGCTACTAATTTGACGGCATAAAT 57.064 33.333 0.00 0.00 0.00 1.40
768 1346 8.615878 ATGCTACTAATTTGACGGCATAAATA 57.384 30.769 0.00 0.00 37.20 1.40
769 1347 8.615878 TGCTACTAATTTGACGGCATAAATAT 57.384 30.769 0.00 0.00 0.00 1.28
770 1348 9.062524 TGCTACTAATTTGACGGCATAAATATT 57.937 29.630 0.00 0.00 0.00 1.28
771 1349 9.329913 GCTACTAATTTGACGGCATAAATATTG 57.670 33.333 0.00 0.00 0.00 1.90
774 1352 9.897744 ACTAATTTGACGGCATAAATATTGATG 57.102 29.630 8.30 8.30 0.00 3.07
775 1353 9.897744 CTAATTTGACGGCATAAATATTGATGT 57.102 29.630 13.40 0.00 0.00 3.06
813 1391 3.571571 GGTCAAACATAAAAAGGCGACC 58.428 45.455 0.00 0.00 35.34 4.79
814 1392 3.571571 GTCAAACATAAAAAGGCGACCC 58.428 45.455 0.00 0.00 0.00 4.46
815 1393 3.004944 GTCAAACATAAAAAGGCGACCCA 59.995 43.478 0.00 0.00 0.00 4.51
816 1394 3.829601 TCAAACATAAAAAGGCGACCCAT 59.170 39.130 0.00 0.00 0.00 4.00
817 1395 4.282195 TCAAACATAAAAAGGCGACCCATT 59.718 37.500 0.00 0.00 0.00 3.16
818 1396 4.882842 AACATAAAAAGGCGACCCATTT 57.117 36.364 0.00 0.00 33.69 2.32
820 1398 5.222079 ACATAAAAAGGCGACCCATTTTT 57.778 34.783 5.00 5.00 38.48 1.94
828 1423 6.783708 AAGGCGACCCATTTTTATGAAATA 57.216 33.333 0.00 0.00 0.00 1.40
831 1426 5.068591 GGCGACCCATTTTTATGAAATAGGT 59.931 40.000 6.31 6.31 0.00 3.08
853 1448 8.547967 AGGTGTATTTACAGTACTTGACAATG 57.452 34.615 0.00 0.00 36.78 2.82
878 1473 4.972201 TGGTGTTGTTTCGTCAAAACTAC 58.028 39.130 7.85 7.85 46.90 2.73
911 1506 9.733219 ATAGCCAAATCATTTTGTTTTGTTTTG 57.267 25.926 9.12 0.00 40.55 2.44
912 1507 7.600960 AGCCAAATCATTTTGTTTTGTTTTGT 58.399 26.923 9.12 0.00 40.55 2.83
913 1508 7.541437 AGCCAAATCATTTTGTTTTGTTTTGTG 59.459 29.630 9.12 0.00 40.55 3.33
914 1509 7.540055 GCCAAATCATTTTGTTTTGTTTTGTGA 59.460 29.630 9.12 0.00 40.55 3.58
915 1510 9.403110 CCAAATCATTTTGTTTTGTTTTGTGAA 57.597 25.926 9.12 0.00 40.55 3.18
920 1515 9.617975 TCATTTTGTTTTGTTTTGTGAAAATCC 57.382 25.926 0.00 0.00 32.22 3.01
921 1516 9.623350 CATTTTGTTTTGTTTTGTGAAAATCCT 57.377 25.926 0.00 0.00 32.22 3.24
922 1517 9.623350 ATTTTGTTTTGTTTTGTGAAAATCCTG 57.377 25.926 0.00 0.00 32.22 3.86
923 1518 7.969536 TTGTTTTGTTTTGTGAAAATCCTGA 57.030 28.000 0.00 0.00 32.22 3.86
924 1519 7.357951 TGTTTTGTTTTGTGAAAATCCTGAC 57.642 32.000 0.00 0.00 32.22 3.51
925 1520 7.158021 TGTTTTGTTTTGTGAAAATCCTGACT 58.842 30.769 0.00 0.00 32.22 3.41
926 1521 7.659390 TGTTTTGTTTTGTGAAAATCCTGACTT 59.341 29.630 0.00 0.00 32.22 3.01
927 1522 7.593875 TTTGTTTTGTGAAAATCCTGACTTG 57.406 32.000 0.00 0.00 32.22 3.16
928 1523 6.522625 TGTTTTGTGAAAATCCTGACTTGA 57.477 33.333 0.00 0.00 32.22 3.02
929 1524 6.929625 TGTTTTGTGAAAATCCTGACTTGAA 58.070 32.000 0.00 0.00 32.22 2.69
930 1525 7.555087 TGTTTTGTGAAAATCCTGACTTGAAT 58.445 30.769 0.00 0.00 32.22 2.57
931 1526 8.690884 TGTTTTGTGAAAATCCTGACTTGAATA 58.309 29.630 0.00 0.00 32.22 1.75
932 1527 9.528018 GTTTTGTGAAAATCCTGACTTGAATAA 57.472 29.630 0.00 0.00 32.22 1.40
933 1528 9.748708 TTTTGTGAAAATCCTGACTTGAATAAG 57.251 29.630 0.00 0.00 39.86 1.73
934 1529 6.913170 TGTGAAAATCCTGACTTGAATAAGC 58.087 36.000 0.00 0.00 37.43 3.09
935 1530 6.489700 TGTGAAAATCCTGACTTGAATAAGCA 59.510 34.615 0.00 0.00 37.43 3.91
936 1531 7.014134 TGTGAAAATCCTGACTTGAATAAGCAA 59.986 33.333 0.00 0.00 37.43 3.91
937 1532 8.031277 GTGAAAATCCTGACTTGAATAAGCAAT 58.969 33.333 0.00 0.00 37.43 3.56
938 1533 8.246180 TGAAAATCCTGACTTGAATAAGCAATC 58.754 33.333 0.00 0.00 37.43 2.67
939 1534 7.707624 AAATCCTGACTTGAATAAGCAATCA 57.292 32.000 0.00 0.00 37.43 2.57
940 1535 7.707624 AATCCTGACTTGAATAAGCAATCAA 57.292 32.000 0.00 0.00 37.43 2.57
941 1536 7.707624 ATCCTGACTTGAATAAGCAATCAAA 57.292 32.000 0.00 0.00 37.43 2.69
942 1537 7.707624 TCCTGACTTGAATAAGCAATCAAAT 57.292 32.000 0.00 0.00 37.43 2.32
943 1538 7.765307 TCCTGACTTGAATAAGCAATCAAATC 58.235 34.615 0.00 0.00 37.43 2.17
944 1539 6.976925 CCTGACTTGAATAAGCAATCAAATCC 59.023 38.462 0.00 0.00 37.43 3.01
945 1540 6.554419 TGACTTGAATAAGCAATCAAATCCG 58.446 36.000 0.00 0.00 37.43 4.18
946 1541 5.343249 ACTTGAATAAGCAATCAAATCCGC 58.657 37.500 0.00 0.00 37.43 5.54
947 1542 4.305989 TGAATAAGCAATCAAATCCGCC 57.694 40.909 0.00 0.00 0.00 6.13
948 1543 3.698539 TGAATAAGCAATCAAATCCGCCA 59.301 39.130 0.00 0.00 0.00 5.69
949 1544 4.341806 TGAATAAGCAATCAAATCCGCCAT 59.658 37.500 0.00 0.00 0.00 4.40
950 1545 2.877043 AAGCAATCAAATCCGCCATC 57.123 45.000 0.00 0.00 0.00 3.51
951 1546 1.035139 AGCAATCAAATCCGCCATCC 58.965 50.000 0.00 0.00 0.00 3.51
952 1547 0.318107 GCAATCAAATCCGCCATCCG 60.318 55.000 0.00 0.00 0.00 4.18
953 1548 0.318107 CAATCAAATCCGCCATCCGC 60.318 55.000 0.00 0.00 35.03 5.54
954 1549 1.455383 AATCAAATCCGCCATCCGCC 61.455 55.000 0.00 0.00 35.03 6.13
955 1550 3.952675 CAAATCCGCCATCCGCCG 61.953 66.667 0.00 0.00 35.03 6.46
1022 1989 1.979855 CCCAATCACAGTCACAACCA 58.020 50.000 0.00 0.00 0.00 3.67
1044 2011 5.409826 CCAATCTCCTAATCTAAATCGCACC 59.590 44.000 0.00 0.00 0.00 5.01
1113 2082 3.126686 GGACTCGTAGAAGTACTCACCAC 59.873 52.174 0.00 0.00 34.09 4.16
1115 2084 2.422832 CTCGTAGAAGTACTCACCACCC 59.577 54.545 0.00 0.00 34.09 4.61
1120 2089 1.874345 AAGTACTCACCACCCGCGAG 61.874 60.000 8.23 0.00 0.00 5.03
1155 2124 4.593864 GATCCACTCCGGCGAGCC 62.594 72.222 9.30 3.59 40.03 4.70
1282 2251 2.365635 CCGTCCCAGTCCCCATCT 60.366 66.667 0.00 0.00 0.00 2.90
1293 2262 3.160047 CCCATCTCCGCTCCTGCT 61.160 66.667 0.00 0.00 36.97 4.24
2493 3462 1.527380 GCCTGTTCGGTGGGTTTGA 60.527 57.895 0.00 0.00 34.25 2.69
2494 3463 1.792118 GCCTGTTCGGTGGGTTTGAC 61.792 60.000 0.00 0.00 34.25 3.18
2495 3464 0.464735 CCTGTTCGGTGGGTTTGACA 60.465 55.000 0.00 0.00 0.00 3.58
2496 3465 1.384525 CTGTTCGGTGGGTTTGACAA 58.615 50.000 0.00 0.00 0.00 3.18
2497 3466 1.064952 CTGTTCGGTGGGTTTGACAAC 59.935 52.381 0.00 0.00 0.00 3.32
2688 3657 0.249911 GGTCGTAGCCATGGATGACC 60.250 60.000 22.61 22.61 39.10 4.02
2698 3667 2.648593 TGGATGACCACGACTCGAA 58.351 52.632 5.20 0.00 41.77 3.71
2716 3685 0.898326 AATTTGACGCCTTCCCACCC 60.898 55.000 0.00 0.00 0.00 4.61
2787 3761 2.922950 CGGTCCCGTCCGTTTGAGA 61.923 63.158 0.00 0.00 44.77 3.27
2860 3834 1.070175 CGTTTTGTGTCCGCTTTCGAT 60.070 47.619 0.00 0.00 38.10 3.59
2870 3844 1.591594 GCTTTCGATCCATCCGCGA 60.592 57.895 8.23 0.00 0.00 5.87
3029 4009 3.083997 CCCCCACTCTTCCCCTCG 61.084 72.222 0.00 0.00 0.00 4.63
3185 4177 3.760035 GGTCTTGAGCTCGCCCGA 61.760 66.667 9.64 0.00 0.00 5.14
3286 4278 0.396974 CAGTGGCTCCTCCTCTAGCT 60.397 60.000 0.00 0.00 36.59 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.678580 TCACGTCATCGGAGGGCA 60.679 61.111 0.00 0.00 41.85 5.36
6 7 1.739338 ATCTCACGTCATCGGAGGGC 61.739 60.000 0.56 0.00 41.85 5.19
7 8 0.031314 CATCTCACGTCATCGGAGGG 59.969 60.000 0.56 0.00 41.85 4.30
9 10 0.101219 TGCATCTCACGTCATCGGAG 59.899 55.000 0.00 0.00 41.85 4.63
10 11 0.179137 GTGCATCTCACGTCATCGGA 60.179 55.000 0.00 0.00 41.85 4.55
19 20 2.040544 CCCCGGTTGTGCATCTCAC 61.041 63.158 0.00 0.00 45.82 3.51
20 21 2.350895 CCCCGGTTGTGCATCTCA 59.649 61.111 0.00 0.00 0.00 3.27
21 22 3.134127 GCCCCGGTTGTGCATCTC 61.134 66.667 0.00 0.00 0.00 2.75
29 30 3.675619 CTAACCCTCGCCCCGGTTG 62.676 68.421 0.00 0.00 42.38 3.77
30 31 3.396570 CTAACCCTCGCCCCGGTT 61.397 66.667 0.00 0.00 44.55 4.44
35 36 4.222847 CTCGCCTAACCCTCGCCC 62.223 72.222 0.00 0.00 0.00 6.13
36 37 4.222847 CCTCGCCTAACCCTCGCC 62.223 72.222 0.00 0.00 0.00 5.54
37 38 3.140225 CTCCTCGCCTAACCCTCGC 62.140 68.421 0.00 0.00 0.00 5.03
38 39 1.035932 TTCTCCTCGCCTAACCCTCG 61.036 60.000 0.00 0.00 0.00 4.63
39 40 0.460722 GTTCTCCTCGCCTAACCCTC 59.539 60.000 0.00 0.00 0.00 4.30
40 41 0.976590 GGTTCTCCTCGCCTAACCCT 60.977 60.000 0.00 0.00 36.24 4.34
41 42 0.976590 AGGTTCTCCTCGCCTAACCC 60.977 60.000 0.00 0.00 41.93 4.11
42 43 0.903236 AAGGTTCTCCTCGCCTAACC 59.097 55.000 0.00 0.00 44.35 2.85
43 44 4.370049 GAATAAGGTTCTCCTCGCCTAAC 58.630 47.826 0.00 0.00 44.35 2.34
44 45 3.387050 GGAATAAGGTTCTCCTCGCCTAA 59.613 47.826 0.00 0.00 44.35 2.69
45 46 2.963782 GGAATAAGGTTCTCCTCGCCTA 59.036 50.000 0.00 0.00 44.35 3.93
46 47 1.763545 GGAATAAGGTTCTCCTCGCCT 59.236 52.381 0.00 0.00 44.35 5.52
47 48 1.485066 TGGAATAAGGTTCTCCTCGCC 59.515 52.381 0.00 0.00 44.35 5.54
48 49 2.168728 AGTGGAATAAGGTTCTCCTCGC 59.831 50.000 0.00 0.00 44.35 5.03
49 50 4.473477 AAGTGGAATAAGGTTCTCCTCG 57.527 45.455 0.00 0.00 44.35 4.63
50 51 4.870991 CGAAAGTGGAATAAGGTTCTCCTC 59.129 45.833 0.00 0.00 44.35 3.71
52 53 4.630505 GTCGAAAGTGGAATAAGGTTCTCC 59.369 45.833 0.00 0.00 0.00 3.71
53 54 4.326548 CGTCGAAAGTGGAATAAGGTTCTC 59.673 45.833 0.00 0.00 0.00 2.87
54 55 4.243270 CGTCGAAAGTGGAATAAGGTTCT 58.757 43.478 0.00 0.00 0.00 3.01
55 56 3.992427 ACGTCGAAAGTGGAATAAGGTTC 59.008 43.478 0.00 0.00 0.00 3.62
56 57 3.992427 GACGTCGAAAGTGGAATAAGGTT 59.008 43.478 0.00 0.00 0.00 3.50
57 58 3.582780 GACGTCGAAAGTGGAATAAGGT 58.417 45.455 0.00 0.00 0.00 3.50
58 59 2.597305 CGACGTCGAAAGTGGAATAAGG 59.403 50.000 33.35 0.00 43.02 2.69
59 60 2.027688 GCGACGTCGAAAGTGGAATAAG 59.972 50.000 39.74 7.55 43.02 1.73
60 61 1.987770 GCGACGTCGAAAGTGGAATAA 59.012 47.619 39.74 0.00 43.02 1.40
61 62 1.068402 TGCGACGTCGAAAGTGGAATA 60.068 47.619 39.74 9.92 43.02 1.75
62 63 0.319211 TGCGACGTCGAAAGTGGAAT 60.319 50.000 39.74 0.00 43.02 3.01
63 64 0.937699 CTGCGACGTCGAAAGTGGAA 60.938 55.000 39.74 13.23 43.02 3.53
64 65 1.371267 CTGCGACGTCGAAAGTGGA 60.371 57.895 39.74 10.98 43.02 4.02
65 66 3.000080 GCTGCGACGTCGAAAGTGG 62.000 63.158 39.74 19.70 43.02 4.00
66 67 2.465920 GCTGCGACGTCGAAAGTG 59.534 61.111 39.74 20.08 43.02 3.16
67 68 2.694829 AAGGCTGCGACGTCGAAAGT 62.695 55.000 39.74 18.04 43.02 2.66
68 69 2.022129 AAGGCTGCGACGTCGAAAG 61.022 57.895 39.74 32.46 43.02 2.62
69 70 2.028484 AAGGCTGCGACGTCGAAA 59.972 55.556 39.74 25.19 43.02 3.46
70 71 2.733218 CAAGGCTGCGACGTCGAA 60.733 61.111 39.74 30.35 43.02 3.71
79 80 2.776670 GCTTGGAAAGGCAAGGCTGC 62.777 60.000 0.00 0.00 46.35 5.25
80 81 1.291272 GCTTGGAAAGGCAAGGCTG 59.709 57.895 0.00 0.00 46.35 4.85
81 82 1.152483 TGCTTGGAAAGGCAAGGCT 60.152 52.632 0.00 0.00 46.35 4.58
82 83 1.291272 CTGCTTGGAAAGGCAAGGC 59.709 57.895 0.00 0.00 46.35 4.35
83 84 0.540365 TCCTGCTTGGAAAGGCAAGG 60.540 55.000 0.00 0.00 46.35 3.61
84 85 3.040965 TCCTGCTTGGAAAGGCAAG 57.959 52.632 0.00 0.00 46.35 4.01
92 93 3.788227 ATAGTTTGTGTCCTGCTTGGA 57.212 42.857 0.00 0.00 43.86 3.53
93 94 5.240623 TGTTTATAGTTTGTGTCCTGCTTGG 59.759 40.000 0.00 0.00 37.10 3.61
94 95 6.312399 TGTTTATAGTTTGTGTCCTGCTTG 57.688 37.500 0.00 0.00 0.00 4.01
95 96 6.952773 TTGTTTATAGTTTGTGTCCTGCTT 57.047 33.333 0.00 0.00 0.00 3.91
96 97 6.546034 AGTTTGTTTATAGTTTGTGTCCTGCT 59.454 34.615 0.00 0.00 0.00 4.24
97 98 6.735130 AGTTTGTTTATAGTTTGTGTCCTGC 58.265 36.000 0.00 0.00 0.00 4.85
98 99 7.925993 TGAGTTTGTTTATAGTTTGTGTCCTG 58.074 34.615 0.00 0.00 0.00 3.86
99 100 8.514330 TTGAGTTTGTTTATAGTTTGTGTCCT 57.486 30.769 0.00 0.00 0.00 3.85
100 101 9.575783 TTTTGAGTTTGTTTATAGTTTGTGTCC 57.424 29.630 0.00 0.00 0.00 4.02
115 116 9.078753 CGTTTTTAGGTGTTATTTTGAGTTTGT 57.921 29.630 0.00 0.00 0.00 2.83
116 117 9.291664 TCGTTTTTAGGTGTTATTTTGAGTTTG 57.708 29.630 0.00 0.00 0.00 2.93
117 118 9.857957 TTCGTTTTTAGGTGTTATTTTGAGTTT 57.142 25.926 0.00 0.00 0.00 2.66
118 119 9.511144 CTTCGTTTTTAGGTGTTATTTTGAGTT 57.489 29.630 0.00 0.00 0.00 3.01
119 120 8.132995 CCTTCGTTTTTAGGTGTTATTTTGAGT 58.867 33.333 0.00 0.00 0.00 3.41
120 121 8.347035 TCCTTCGTTTTTAGGTGTTATTTTGAG 58.653 33.333 0.00 0.00 33.15 3.02
121 122 8.223177 TCCTTCGTTTTTAGGTGTTATTTTGA 57.777 30.769 0.00 0.00 33.15 2.69
122 123 8.347035 TCTCCTTCGTTTTTAGGTGTTATTTTG 58.653 33.333 0.00 0.00 33.15 2.44
123 124 8.454570 TCTCCTTCGTTTTTAGGTGTTATTTT 57.545 30.769 0.00 0.00 33.15 1.82
124 125 8.512138 CATCTCCTTCGTTTTTAGGTGTTATTT 58.488 33.333 0.00 0.00 33.15 1.40
125 126 7.361799 GCATCTCCTTCGTTTTTAGGTGTTATT 60.362 37.037 0.00 0.00 33.15 1.40
126 127 6.093633 GCATCTCCTTCGTTTTTAGGTGTTAT 59.906 38.462 0.00 0.00 33.15 1.89
127 128 5.410439 GCATCTCCTTCGTTTTTAGGTGTTA 59.590 40.000 0.00 0.00 33.15 2.41
128 129 4.215613 GCATCTCCTTCGTTTTTAGGTGTT 59.784 41.667 0.00 0.00 33.15 3.32
129 130 3.751698 GCATCTCCTTCGTTTTTAGGTGT 59.248 43.478 0.00 0.00 33.15 4.16
130 131 3.127030 GGCATCTCCTTCGTTTTTAGGTG 59.873 47.826 0.00 0.00 33.15 4.00
131 132 3.344515 GGCATCTCCTTCGTTTTTAGGT 58.655 45.455 0.00 0.00 33.15 3.08
132 133 2.683362 GGGCATCTCCTTCGTTTTTAGG 59.317 50.000 0.00 0.00 34.39 2.69
133 134 3.610911 AGGGCATCTCCTTCGTTTTTAG 58.389 45.455 0.00 0.00 32.13 1.85
134 135 3.713826 AGGGCATCTCCTTCGTTTTTA 57.286 42.857 0.00 0.00 32.13 1.52
135 136 2.586648 AGGGCATCTCCTTCGTTTTT 57.413 45.000 0.00 0.00 32.13 1.94
136 137 2.586648 AAGGGCATCTCCTTCGTTTT 57.413 45.000 0.00 0.00 43.13 2.43
143 144 1.306141 TGACGGAAGGGCATCTCCT 60.306 57.895 0.00 0.00 39.17 3.69
144 145 1.144936 CTGACGGAAGGGCATCTCC 59.855 63.158 0.00 0.00 0.00 3.71
145 146 1.522580 GCTGACGGAAGGGCATCTC 60.523 63.158 0.00 0.00 0.00 2.75
146 147 1.841302 TTGCTGACGGAAGGGCATCT 61.841 55.000 0.00 0.00 35.80 2.90
147 148 0.749454 ATTGCTGACGGAAGGGCATC 60.749 55.000 0.00 0.00 35.80 3.91
148 149 1.033746 CATTGCTGACGGAAGGGCAT 61.034 55.000 0.00 0.00 35.80 4.40
149 150 1.675310 CATTGCTGACGGAAGGGCA 60.675 57.895 0.00 0.00 34.55 5.36
150 151 2.409870 CCATTGCTGACGGAAGGGC 61.410 63.158 0.00 0.00 35.67 5.19
151 152 1.002134 ACCATTGCTGACGGAAGGG 60.002 57.895 0.00 0.00 46.24 3.95
152 153 1.361668 CGACCATTGCTGACGGAAGG 61.362 60.000 0.00 0.00 0.00 3.46
153 154 1.361668 CCGACCATTGCTGACGGAAG 61.362 60.000 0.00 0.00 41.29 3.46
154 155 1.375396 CCGACCATTGCTGACGGAA 60.375 57.895 0.00 0.00 41.29 4.30
155 156 2.264480 CCGACCATTGCTGACGGA 59.736 61.111 0.00 0.00 41.29 4.69
156 157 2.047274 ACCGACCATTGCTGACGG 60.047 61.111 0.00 0.00 42.97 4.79
157 158 2.100631 GGACCGACCATTGCTGACG 61.101 63.158 0.00 0.00 38.79 4.35
158 159 1.745489 GGGACCGACCATTGCTGAC 60.745 63.158 0.00 0.00 41.20 3.51
159 160 2.220586 TGGGACCGACCATTGCTGA 61.221 57.895 0.00 0.00 41.20 4.26
160 161 2.040544 GTGGGACCGACCATTGCTG 61.041 63.158 0.00 0.00 43.59 4.41
161 162 2.224159 AGTGGGACCGACCATTGCT 61.224 57.895 2.55 0.00 43.59 3.91
162 163 2.040544 CAGTGGGACCGACCATTGC 61.041 63.158 2.55 0.00 43.59 3.56
163 164 4.301505 CAGTGGGACCGACCATTG 57.698 61.111 2.55 0.00 43.59 2.82
164 165 2.351276 GCAGTGGGACCGACCATT 59.649 61.111 2.55 0.00 43.59 3.16
165 166 4.082523 CGCAGTGGGACCGACCAT 62.083 66.667 0.00 0.00 43.59 3.55
172 173 4.101448 ATGGAGGCGCAGTGGGAC 62.101 66.667 10.83 8.45 0.00 4.46
173 174 4.100084 CATGGAGGCGCAGTGGGA 62.100 66.667 10.83 0.00 0.00 4.37
174 175 3.411114 ATCATGGAGGCGCAGTGGG 62.411 63.158 10.83 2.14 0.00 4.61
175 176 1.890979 GATCATGGAGGCGCAGTGG 60.891 63.158 10.83 0.00 0.00 4.00
176 177 0.390492 TAGATCATGGAGGCGCAGTG 59.610 55.000 10.83 0.00 0.00 3.66
177 178 1.069823 CTTAGATCATGGAGGCGCAGT 59.930 52.381 10.83 0.00 0.00 4.40
178 179 1.342496 TCTTAGATCATGGAGGCGCAG 59.658 52.381 10.83 0.00 0.00 5.18
179 180 1.069204 GTCTTAGATCATGGAGGCGCA 59.931 52.381 10.83 0.00 0.00 6.09
180 181 1.606737 GGTCTTAGATCATGGAGGCGC 60.607 57.143 0.00 0.00 0.00 6.53
181 182 1.688735 TGGTCTTAGATCATGGAGGCG 59.311 52.381 0.00 0.00 0.00 5.52
182 183 2.435805 TGTGGTCTTAGATCATGGAGGC 59.564 50.000 0.00 0.00 0.00 4.70
183 184 3.963374 TCTGTGGTCTTAGATCATGGAGG 59.037 47.826 0.00 0.00 0.00 4.30
184 185 5.362143 TCTTCTGTGGTCTTAGATCATGGAG 59.638 44.000 0.00 0.00 0.00 3.86
185 186 5.127845 GTCTTCTGTGGTCTTAGATCATGGA 59.872 44.000 0.00 0.00 0.00 3.41
186 187 5.105187 TGTCTTCTGTGGTCTTAGATCATGG 60.105 44.000 0.00 0.00 0.00 3.66
187 188 5.970592 TGTCTTCTGTGGTCTTAGATCATG 58.029 41.667 0.00 0.00 0.00 3.07
188 189 6.351711 CCTTGTCTTCTGTGGTCTTAGATCAT 60.352 42.308 0.00 0.00 0.00 2.45
189 190 5.047021 CCTTGTCTTCTGTGGTCTTAGATCA 60.047 44.000 0.00 0.00 0.00 2.92
190 191 5.415221 CCTTGTCTTCTGTGGTCTTAGATC 58.585 45.833 0.00 0.00 0.00 2.75
191 192 4.323104 GCCTTGTCTTCTGTGGTCTTAGAT 60.323 45.833 0.00 0.00 0.00 1.98
192 193 3.006967 GCCTTGTCTTCTGTGGTCTTAGA 59.993 47.826 0.00 0.00 0.00 2.10
193 194 3.244215 TGCCTTGTCTTCTGTGGTCTTAG 60.244 47.826 0.00 0.00 0.00 2.18
194 195 2.703536 TGCCTTGTCTTCTGTGGTCTTA 59.296 45.455 0.00 0.00 0.00 2.10
195 196 1.490490 TGCCTTGTCTTCTGTGGTCTT 59.510 47.619 0.00 0.00 0.00 3.01
196 197 1.071385 CTGCCTTGTCTTCTGTGGTCT 59.929 52.381 0.00 0.00 0.00 3.85
197 198 1.070758 TCTGCCTTGTCTTCTGTGGTC 59.929 52.381 0.00 0.00 0.00 4.02
198 199 1.131638 TCTGCCTTGTCTTCTGTGGT 58.868 50.000 0.00 0.00 0.00 4.16
199 200 2.486472 ATCTGCCTTGTCTTCTGTGG 57.514 50.000 0.00 0.00 0.00 4.17
200 201 2.486982 CCAATCTGCCTTGTCTTCTGTG 59.513 50.000 0.00 0.00 0.00 3.66
201 202 2.787994 CCAATCTGCCTTGTCTTCTGT 58.212 47.619 0.00 0.00 0.00 3.41
202 203 1.471684 GCCAATCTGCCTTGTCTTCTG 59.528 52.381 0.00 0.00 0.00 3.02
203 204 1.074405 TGCCAATCTGCCTTGTCTTCT 59.926 47.619 0.00 0.00 0.00 2.85
204 205 1.471684 CTGCCAATCTGCCTTGTCTTC 59.528 52.381 0.00 0.00 0.00 2.87
205 206 1.542492 CTGCCAATCTGCCTTGTCTT 58.458 50.000 0.00 0.00 0.00 3.01
206 207 0.964358 GCTGCCAATCTGCCTTGTCT 60.964 55.000 0.00 0.00 34.04 3.41
207 208 1.509923 GCTGCCAATCTGCCTTGTC 59.490 57.895 0.00 0.00 34.04 3.18
208 209 3.690745 GCTGCCAATCTGCCTTGT 58.309 55.556 0.00 0.00 34.04 3.16
229 230 3.987954 TTTCCCGCCTTCCATCGGC 62.988 63.158 0.00 0.00 44.01 5.54
230 231 1.377987 TTTTCCCGCCTTCCATCGG 60.378 57.895 0.00 0.00 44.89 4.18
270 271 6.102174 ACCAAATATTTTACTCCTCCCCGTAT 59.898 38.462 0.00 0.00 0.00 3.06
272 273 4.228895 ACCAAATATTTTACTCCTCCCCGT 59.771 41.667 0.00 0.00 0.00 5.28
273 274 4.788679 ACCAAATATTTTACTCCTCCCCG 58.211 43.478 0.00 0.00 0.00 5.73
301 868 4.096231 TGATGTGAAATTGGCATAACCTCG 59.904 41.667 0.00 0.00 40.22 4.63
304 871 5.329035 AGTGATGTGAAATTGGCATAACC 57.671 39.130 0.00 0.00 39.84 2.85
328 895 1.414181 TGAAATTGGCTCCCGCAAAAA 59.586 42.857 0.00 0.00 38.10 1.94
329 896 1.043816 TGAAATTGGCTCCCGCAAAA 58.956 45.000 0.00 0.00 38.10 2.44
330 897 0.316841 GTGAAATTGGCTCCCGCAAA 59.683 50.000 0.00 0.00 38.10 3.68
331 898 0.825425 TGTGAAATTGGCTCCCGCAA 60.825 50.000 0.00 0.00 38.10 4.85
332 899 0.611618 ATGTGAAATTGGCTCCCGCA 60.612 50.000 0.00 0.00 38.10 5.69
333 900 0.101219 GATGTGAAATTGGCTCCCGC 59.899 55.000 0.00 0.00 0.00 6.13
334 901 1.133025 GTGATGTGAAATTGGCTCCCG 59.867 52.381 0.00 0.00 0.00 5.14
335 902 1.478105 GGTGATGTGAAATTGGCTCCC 59.522 52.381 0.00 0.00 0.00 4.30
336 903 2.170166 TGGTGATGTGAAATTGGCTCC 58.830 47.619 0.00 0.00 0.00 4.70
337 904 3.005684 TGTTGGTGATGTGAAATTGGCTC 59.994 43.478 0.00 0.00 0.00 4.70
338 905 2.964464 TGTTGGTGATGTGAAATTGGCT 59.036 40.909 0.00 0.00 0.00 4.75
339 906 3.319755 CTGTTGGTGATGTGAAATTGGC 58.680 45.455 0.00 0.00 0.00 4.52
340 907 3.006110 AGCTGTTGGTGATGTGAAATTGG 59.994 43.478 0.00 0.00 0.00 3.16
341 908 4.247267 AGCTGTTGGTGATGTGAAATTG 57.753 40.909 0.00 0.00 0.00 2.32
342 909 6.403866 TTTAGCTGTTGGTGATGTGAAATT 57.596 33.333 0.00 0.00 0.00 1.82
343 910 6.594788 ATTTAGCTGTTGGTGATGTGAAAT 57.405 33.333 0.00 0.00 0.00 2.17
344 911 5.334802 CGATTTAGCTGTTGGTGATGTGAAA 60.335 40.000 0.00 0.00 0.00 2.69
345 912 4.154015 CGATTTAGCTGTTGGTGATGTGAA 59.846 41.667 0.00 0.00 0.00 3.18
346 913 3.684305 CGATTTAGCTGTTGGTGATGTGA 59.316 43.478 0.00 0.00 0.00 3.58
347 914 3.436704 ACGATTTAGCTGTTGGTGATGTG 59.563 43.478 0.00 0.00 0.00 3.21
348 915 3.674997 ACGATTTAGCTGTTGGTGATGT 58.325 40.909 0.00 0.00 0.00 3.06
349 916 4.685169 AACGATTTAGCTGTTGGTGATG 57.315 40.909 0.00 0.00 0.00 3.07
357 924 6.128391 TGCTCGAAAAATAACGATTTAGCTGT 60.128 34.615 0.00 0.00 35.38 4.40
386 953 7.959175 ACAAACATGTAAGACACTAGGAGTTA 58.041 34.615 0.00 0.00 0.00 2.24
400 967 4.812091 ACGCAGACACTTACAAACATGTAA 59.188 37.500 0.00 1.89 33.73 2.41
401 968 4.373527 ACGCAGACACTTACAAACATGTA 58.626 39.130 0.00 0.00 0.00 2.29
406 977 4.684703 ACATAGACGCAGACACTTACAAAC 59.315 41.667 0.00 0.00 0.00 2.93
415 986 3.378911 TGTGAAACATAGACGCAGACA 57.621 42.857 0.00 0.00 45.67 3.41
428 999 3.545873 CGGATTTTGTGTGTGTGTGAAAC 59.454 43.478 0.00 0.00 37.35 2.78
431 1002 2.353269 GTCGGATTTTGTGTGTGTGTGA 59.647 45.455 0.00 0.00 0.00 3.58
433 1004 1.673920 GGTCGGATTTTGTGTGTGTGT 59.326 47.619 0.00 0.00 0.00 3.72
435 1006 1.133915 AGGGTCGGATTTTGTGTGTGT 60.134 47.619 0.00 0.00 0.00 3.72
437 1008 1.420138 AGAGGGTCGGATTTTGTGTGT 59.580 47.619 0.00 0.00 0.00 3.72
452 1030 2.560542 AGAGCGTGCTATGATAAGAGGG 59.439 50.000 0.00 0.00 0.00 4.30
453 1031 3.505680 AGAGAGCGTGCTATGATAAGAGG 59.494 47.826 0.00 0.00 0.00 3.69
460 1038 1.697284 ATGGAGAGAGCGTGCTATGA 58.303 50.000 0.00 0.00 0.00 2.15
463 1041 1.769026 AGAATGGAGAGAGCGTGCTA 58.231 50.000 0.00 0.00 0.00 3.49
464 1042 0.901124 AAGAATGGAGAGAGCGTGCT 59.099 50.000 0.00 0.00 0.00 4.40
465 1043 2.586258 TAAGAATGGAGAGAGCGTGC 57.414 50.000 0.00 0.00 0.00 5.34
466 1044 5.862924 TTTTTAAGAATGGAGAGAGCGTG 57.137 39.130 0.00 0.00 0.00 5.34
488 1066 9.787435 TCATACAATAAAGTTGGAAGTACACTT 57.213 29.630 0.00 0.00 39.23 3.16
489 1067 9.959721 ATCATACAATAAAGTTGGAAGTACACT 57.040 29.630 0.00 0.00 0.00 3.55
491 1069 9.952030 TGATCATACAATAAAGTTGGAAGTACA 57.048 29.630 0.00 0.00 0.00 2.90
512 1090 8.236586 CGGTCAAACTTTGAGATAATTTGATCA 58.763 33.333 4.36 0.00 39.35 2.92
513 1091 8.450964 TCGGTCAAACTTTGAGATAATTTGATC 58.549 33.333 4.36 0.00 40.36 2.92
514 1092 8.335532 TCGGTCAAACTTTGAGATAATTTGAT 57.664 30.769 4.36 0.00 40.36 2.57
515 1093 7.444183 ACTCGGTCAAACTTTGAGATAATTTGA 59.556 33.333 4.36 0.00 41.01 2.69
516 1094 7.584987 ACTCGGTCAAACTTTGAGATAATTTG 58.415 34.615 4.36 0.00 41.01 2.32
517 1095 7.745620 ACTCGGTCAAACTTTGAGATAATTT 57.254 32.000 4.36 0.00 41.01 1.82
518 1096 7.745620 AACTCGGTCAAACTTTGAGATAATT 57.254 32.000 4.36 0.00 41.01 1.40
519 1097 7.745620 AAACTCGGTCAAACTTTGAGATAAT 57.254 32.000 4.36 0.00 41.01 1.28
520 1098 8.717821 CATAAACTCGGTCAAACTTTGAGATAA 58.282 33.333 4.36 0.00 41.01 1.75
521 1099 8.092068 TCATAAACTCGGTCAAACTTTGAGATA 58.908 33.333 4.36 0.00 41.01 1.98
522 1100 6.934645 TCATAAACTCGGTCAAACTTTGAGAT 59.065 34.615 4.36 0.00 41.01 2.75
523 1101 6.285224 TCATAAACTCGGTCAAACTTTGAGA 58.715 36.000 4.36 0.00 41.01 3.27
524 1102 6.539649 TCATAAACTCGGTCAAACTTTGAG 57.460 37.500 4.36 0.00 41.01 3.02
525 1103 6.928979 TTCATAAACTCGGTCAAACTTTGA 57.071 33.333 0.00 0.00 37.33 2.69
526 1104 7.979115 TTTTCATAAACTCGGTCAAACTTTG 57.021 32.000 0.00 0.00 0.00 2.77
527 1105 8.248253 ACTTTTTCATAAACTCGGTCAAACTTT 58.752 29.630 0.00 0.00 0.00 2.66
528 1106 7.768240 ACTTTTTCATAAACTCGGTCAAACTT 58.232 30.769 0.00 0.00 0.00 2.66
529 1107 7.329588 ACTTTTTCATAAACTCGGTCAAACT 57.670 32.000 0.00 0.00 0.00 2.66
533 1111 9.878667 TGATATACTTTTTCATAAACTCGGTCA 57.121 29.630 0.00 0.00 0.00 4.02
602 1180 9.803130 CGTCAAATTAGTAGCATTAGATTCATG 57.197 33.333 0.00 0.00 0.00 3.07
603 1181 8.993121 CCGTCAAATTAGTAGCATTAGATTCAT 58.007 33.333 0.00 0.00 0.00 2.57
604 1182 8.201464 TCCGTCAAATTAGTAGCATTAGATTCA 58.799 33.333 0.00 0.00 0.00 2.57
605 1183 8.589335 TCCGTCAAATTAGTAGCATTAGATTC 57.411 34.615 0.00 0.00 0.00 2.52
606 1184 8.958119 TTCCGTCAAATTAGTAGCATTAGATT 57.042 30.769 0.00 0.00 0.00 2.40
611 1189 9.950680 CATTTATTCCGTCAAATTAGTAGCATT 57.049 29.630 0.00 0.00 0.00 3.56
612 1190 9.120538 ACATTTATTCCGTCAAATTAGTAGCAT 57.879 29.630 0.00 0.00 0.00 3.79
613 1191 8.500753 ACATTTATTCCGTCAAATTAGTAGCA 57.499 30.769 0.00 0.00 0.00 3.49
614 1192 9.221775 CAACATTTATTCCGTCAAATTAGTAGC 57.778 33.333 0.00 0.00 0.00 3.58
620 1198 8.527810 ACCATACAACATTTATTCCGTCAAATT 58.472 29.630 0.00 0.00 0.00 1.82
621 1199 8.062065 ACCATACAACATTTATTCCGTCAAAT 57.938 30.769 0.00 0.00 0.00 2.32
622 1200 7.175119 TGACCATACAACATTTATTCCGTCAAA 59.825 33.333 0.00 0.00 0.00 2.69
623 1201 6.655425 TGACCATACAACATTTATTCCGTCAA 59.345 34.615 0.00 0.00 0.00 3.18
624 1202 6.174049 TGACCATACAACATTTATTCCGTCA 58.826 36.000 0.00 0.00 0.00 4.35
625 1203 6.671614 TGACCATACAACATTTATTCCGTC 57.328 37.500 0.00 0.00 0.00 4.79
626 1204 7.455641 TTTGACCATACAACATTTATTCCGT 57.544 32.000 0.00 0.00 0.00 4.69
627 1205 8.925161 AATTTGACCATACAACATTTATTCCG 57.075 30.769 0.00 0.00 0.00 4.30
636 1214 9.295825 ACTTTGAGATAATTTGACCATACAACA 57.704 29.630 0.00 0.00 0.00 3.33
646 1224 6.378582 GCGGTCAAACTTTGAGATAATTTGA 58.621 36.000 4.36 0.00 41.01 2.69
647 1225 5.283717 CGCGGTCAAACTTTGAGATAATTTG 59.716 40.000 4.36 0.00 41.01 2.32
648 1226 5.048991 ACGCGGTCAAACTTTGAGATAATTT 60.049 36.000 12.47 0.00 41.01 1.82
649 1227 4.454504 ACGCGGTCAAACTTTGAGATAATT 59.545 37.500 12.47 0.00 41.01 1.40
650 1228 4.000988 ACGCGGTCAAACTTTGAGATAAT 58.999 39.130 12.47 0.00 41.01 1.28
651 1229 3.395639 ACGCGGTCAAACTTTGAGATAA 58.604 40.909 12.47 0.00 41.01 1.75
652 1230 3.034721 ACGCGGTCAAACTTTGAGATA 57.965 42.857 12.47 0.00 41.01 1.98
653 1231 1.878953 ACGCGGTCAAACTTTGAGAT 58.121 45.000 12.47 0.00 41.01 2.75
654 1232 1.658994 AACGCGGTCAAACTTTGAGA 58.341 45.000 12.47 0.00 41.01 3.27
655 1233 2.468532 AAACGCGGTCAAACTTTGAG 57.531 45.000 12.47 0.00 41.01 3.02
656 1234 3.850374 GCATAAACGCGGTCAAACTTTGA 60.850 43.478 12.47 0.00 37.33 2.69
657 1235 2.403698 GCATAAACGCGGTCAAACTTTG 59.596 45.455 12.47 0.00 0.00 2.77
658 1236 2.033550 TGCATAAACGCGGTCAAACTTT 59.966 40.909 12.47 2.05 33.35 2.66
659 1237 1.604755 TGCATAAACGCGGTCAAACTT 59.395 42.857 12.47 0.00 33.35 2.66
660 1238 1.231221 TGCATAAACGCGGTCAAACT 58.769 45.000 12.47 0.00 33.35 2.66
661 1239 2.039327 TTGCATAAACGCGGTCAAAC 57.961 45.000 12.47 0.00 33.35 2.93
662 1240 2.776312 TTTGCATAAACGCGGTCAAA 57.224 40.000 12.47 7.96 33.35 2.69
663 1241 2.776312 TTTTGCATAAACGCGGTCAA 57.224 40.000 12.47 0.38 33.35 3.18
664 1242 2.776312 TTTTTGCATAAACGCGGTCA 57.224 40.000 12.47 0.00 33.35 4.02
665 1243 6.853872 TGATATATTTTTGCATAAACGCGGTC 59.146 34.615 12.47 0.00 33.35 4.79
666 1244 6.730175 TGATATATTTTTGCATAAACGCGGT 58.270 32.000 12.47 0.00 33.35 5.68
667 1245 7.616103 TTGATATATTTTTGCATAAACGCGG 57.384 32.000 12.47 0.00 33.35 6.46
668 1246 8.689954 ACATTGATATATTTTTGCATAAACGCG 58.310 29.630 3.53 3.53 33.35 6.01
733 1311 9.803130 CGTCAAATTAGTAGCATTAGATTCATG 57.197 33.333 0.00 0.00 0.00 3.07
734 1312 8.993121 CCGTCAAATTAGTAGCATTAGATTCAT 58.007 33.333 0.00 0.00 0.00 2.57
735 1313 7.042051 GCCGTCAAATTAGTAGCATTAGATTCA 60.042 37.037 0.00 0.00 0.00 2.57
736 1314 7.042051 TGCCGTCAAATTAGTAGCATTAGATTC 60.042 37.037 0.00 0.00 0.00 2.52
737 1315 6.765989 TGCCGTCAAATTAGTAGCATTAGATT 59.234 34.615 0.00 0.00 0.00 2.40
738 1316 6.288294 TGCCGTCAAATTAGTAGCATTAGAT 58.712 36.000 0.00 0.00 0.00 1.98
739 1317 5.666462 TGCCGTCAAATTAGTAGCATTAGA 58.334 37.500 0.00 0.00 0.00 2.10
740 1318 5.984233 TGCCGTCAAATTAGTAGCATTAG 57.016 39.130 0.00 0.00 0.00 1.73
741 1319 8.439993 TTTATGCCGTCAAATTAGTAGCATTA 57.560 30.769 0.00 0.00 39.89 1.90
742 1320 6.935741 TTATGCCGTCAAATTAGTAGCATT 57.064 33.333 0.00 0.00 39.89 3.56
743 1321 6.935741 TTTATGCCGTCAAATTAGTAGCAT 57.064 33.333 0.00 0.00 41.89 3.79
744 1322 6.935741 ATTTATGCCGTCAAATTAGTAGCA 57.064 33.333 0.00 0.00 0.00 3.49
745 1323 9.329913 CAATATTTATGCCGTCAAATTAGTAGC 57.670 33.333 0.00 0.00 0.00 3.58
748 1326 9.897744 CATCAATATTTATGCCGTCAAATTAGT 57.102 29.630 0.00 0.00 0.00 2.24
749 1327 9.897744 ACATCAATATTTATGCCGTCAAATTAG 57.102 29.630 9.13 0.00 0.00 1.73
784 1362 7.698970 CGCCTTTTTATGTTTGACCGTATTTAT 59.301 33.333 0.00 0.00 0.00 1.40
785 1363 7.022384 CGCCTTTTTATGTTTGACCGTATTTA 58.978 34.615 0.00 0.00 0.00 1.40
786 1364 5.859648 CGCCTTTTTATGTTTGACCGTATTT 59.140 36.000 0.00 0.00 0.00 1.40
787 1365 5.181622 TCGCCTTTTTATGTTTGACCGTATT 59.818 36.000 0.00 0.00 0.00 1.89
788 1366 4.696402 TCGCCTTTTTATGTTTGACCGTAT 59.304 37.500 0.00 0.00 0.00 3.06
789 1367 4.063689 TCGCCTTTTTATGTTTGACCGTA 58.936 39.130 0.00 0.00 0.00 4.02
790 1368 2.879646 TCGCCTTTTTATGTTTGACCGT 59.120 40.909 0.00 0.00 0.00 4.83
791 1369 3.231160 GTCGCCTTTTTATGTTTGACCG 58.769 45.455 0.00 0.00 0.00 4.79
792 1370 3.571571 GGTCGCCTTTTTATGTTTGACC 58.428 45.455 0.00 0.00 38.01 4.02
793 1371 3.004944 TGGGTCGCCTTTTTATGTTTGAC 59.995 43.478 0.00 0.00 0.00 3.18
794 1372 3.223435 TGGGTCGCCTTTTTATGTTTGA 58.777 40.909 0.00 0.00 0.00 2.69
795 1373 3.651803 TGGGTCGCCTTTTTATGTTTG 57.348 42.857 0.00 0.00 0.00 2.93
796 1374 4.882842 AATGGGTCGCCTTTTTATGTTT 57.117 36.364 0.00 0.00 0.00 2.83
797 1375 4.882842 AAATGGGTCGCCTTTTTATGTT 57.117 36.364 0.00 0.00 0.00 2.71
798 1376 4.882842 AAAATGGGTCGCCTTTTTATGT 57.117 36.364 0.00 0.00 0.00 2.29
803 1381 5.476091 TTCATAAAAATGGGTCGCCTTTT 57.524 34.783 0.00 0.00 0.00 2.27
805 1383 5.675684 ATTTCATAAAAATGGGTCGCCTT 57.324 34.783 0.00 0.00 0.00 4.35
828 1423 8.154856 ACATTGTCAAGTACTGTAAATACACCT 58.845 33.333 0.00 0.00 31.93 4.00
841 1436 6.554334 ACAACACCATACATTGTCAAGTAC 57.446 37.500 0.00 0.00 30.82 2.73
847 1442 5.103290 ACGAAACAACACCATACATTGTC 57.897 39.130 0.00 0.00 35.54 3.18
853 1448 5.859824 GTTTTGACGAAACAACACCATAC 57.140 39.130 12.61 0.00 45.57 2.39
902 1497 7.875041 TCAAGTCAGGATTTTCACAAAACAAAA 59.125 29.630 0.00 0.00 32.37 2.44
903 1498 7.382110 TCAAGTCAGGATTTTCACAAAACAAA 58.618 30.769 0.00 0.00 32.37 2.83
905 1500 6.522625 TCAAGTCAGGATTTTCACAAAACA 57.477 33.333 0.00 0.00 32.37 2.83
906 1501 9.528018 TTATTCAAGTCAGGATTTTCACAAAAC 57.472 29.630 0.00 0.00 32.37 2.43
907 1502 9.748708 CTTATTCAAGTCAGGATTTTCACAAAA 57.251 29.630 0.00 0.00 34.41 2.44
908 1503 7.867403 GCTTATTCAAGTCAGGATTTTCACAAA 59.133 33.333 0.00 0.00 34.00 2.83
909 1504 7.014134 TGCTTATTCAAGTCAGGATTTTCACAA 59.986 33.333 0.00 0.00 34.00 3.33
910 1505 6.489700 TGCTTATTCAAGTCAGGATTTTCACA 59.510 34.615 0.00 0.00 34.00 3.58
911 1506 6.913170 TGCTTATTCAAGTCAGGATTTTCAC 58.087 36.000 0.00 0.00 34.00 3.18
912 1507 7.523293 TTGCTTATTCAAGTCAGGATTTTCA 57.477 32.000 0.00 0.00 34.00 2.69
913 1508 8.246180 TGATTGCTTATTCAAGTCAGGATTTTC 58.754 33.333 0.00 0.00 34.00 2.29
914 1509 8.125978 TGATTGCTTATTCAAGTCAGGATTTT 57.874 30.769 0.00 0.00 34.00 1.82
915 1510 7.707624 TGATTGCTTATTCAAGTCAGGATTT 57.292 32.000 0.00 0.00 34.00 2.17
916 1511 7.707624 TTGATTGCTTATTCAAGTCAGGATT 57.292 32.000 0.00 0.00 34.00 3.01
917 1512 7.707624 TTTGATTGCTTATTCAAGTCAGGAT 57.292 32.000 0.00 0.00 33.68 3.24
918 1513 7.148018 GGATTTGATTGCTTATTCAAGTCAGGA 60.148 37.037 9.40 0.00 39.19 3.86
919 1514 6.976925 GGATTTGATTGCTTATTCAAGTCAGG 59.023 38.462 9.40 0.00 39.19 3.86
920 1515 6.690098 CGGATTTGATTGCTTATTCAAGTCAG 59.310 38.462 9.40 3.33 39.19 3.51
921 1516 6.554419 CGGATTTGATTGCTTATTCAAGTCA 58.446 36.000 9.40 0.00 39.19 3.41
922 1517 5.456822 GCGGATTTGATTGCTTATTCAAGTC 59.543 40.000 0.00 0.00 37.67 3.01
923 1518 5.343249 GCGGATTTGATTGCTTATTCAAGT 58.657 37.500 0.00 0.00 33.68 3.16
924 1519 4.741676 GGCGGATTTGATTGCTTATTCAAG 59.258 41.667 0.00 0.00 33.68 3.02
925 1520 4.159321 TGGCGGATTTGATTGCTTATTCAA 59.841 37.500 0.00 0.00 0.00 2.69
926 1521 3.698539 TGGCGGATTTGATTGCTTATTCA 59.301 39.130 0.00 0.00 0.00 2.57
927 1522 4.305989 TGGCGGATTTGATTGCTTATTC 57.694 40.909 0.00 0.00 0.00 1.75
928 1523 4.262164 GGATGGCGGATTTGATTGCTTATT 60.262 41.667 0.00 0.00 0.00 1.40
929 1524 3.256631 GGATGGCGGATTTGATTGCTTAT 59.743 43.478 0.00 0.00 0.00 1.73
930 1525 2.622942 GGATGGCGGATTTGATTGCTTA 59.377 45.455 0.00 0.00 0.00 3.09
931 1526 1.410153 GGATGGCGGATTTGATTGCTT 59.590 47.619 0.00 0.00 0.00 3.91
932 1527 1.035139 GGATGGCGGATTTGATTGCT 58.965 50.000 0.00 0.00 0.00 3.91
933 1528 0.318107 CGGATGGCGGATTTGATTGC 60.318 55.000 0.00 0.00 0.00 3.56
934 1529 0.318107 GCGGATGGCGGATTTGATTG 60.318 55.000 0.00 0.00 0.00 2.67
935 1530 1.455383 GGCGGATGGCGGATTTGATT 61.455 55.000 0.00 0.00 44.92 2.57
936 1531 1.898574 GGCGGATGGCGGATTTGAT 60.899 57.895 0.00 0.00 44.92 2.57
937 1532 2.515991 GGCGGATGGCGGATTTGA 60.516 61.111 0.00 0.00 44.92 2.69
956 1551 2.519063 TTGGGCACTGTGCTGGTG 60.519 61.111 29.54 0.00 44.28 4.17
957 1552 2.519302 GTTGGGCACTGTGCTGGT 60.519 61.111 29.54 0.00 44.28 4.00
981 1576 1.870941 TTGAGGAGGAGTAGCGGGGA 61.871 60.000 0.00 0.00 0.00 4.81
1022 1989 5.071788 TGGGTGCGATTTAGATTAGGAGATT 59.928 40.000 0.00 0.00 0.00 2.40
1044 2011 4.381505 CCGTGGATTTGGGTTAGATTTTGG 60.382 45.833 0.00 0.00 0.00 3.28
1155 2124 3.402681 ATGACAGTGGCCTCGGGG 61.403 66.667 3.32 0.00 0.00 5.73
1293 2262 2.431683 GTGGTGGAGGAAGCAGCA 59.568 61.111 0.00 0.00 0.00 4.41
2091 3060 1.182667 CCACCACGTAGAGATGGTCA 58.817 55.000 0.00 0.00 46.62 4.02
2172 3141 4.463879 CCGCCACCAGCTCTGAGG 62.464 72.222 6.83 1.69 40.39 3.86
2430 3399 4.308458 CACTCGACCCCCGCACAA 62.308 66.667 0.00 0.00 38.37 3.33
2439 3408 2.807045 CGCTGTCAGCACTCGACC 60.807 66.667 24.13 0.00 42.58 4.79
2497 3466 5.020071 AGTGTTTACTTGCACACCGTGTG 62.020 47.826 24.65 24.65 43.78 3.82
2688 3657 0.093026 GGCGTCAAATTCGAGTCGTG 59.907 55.000 13.12 3.33 0.00 4.35
2689 3658 0.038526 AGGCGTCAAATTCGAGTCGT 60.039 50.000 13.12 0.00 0.00 4.34
2690 3659 1.059264 GAAGGCGTCAAATTCGAGTCG 59.941 52.381 6.09 6.09 0.00 4.18
2698 3667 1.304134 GGGTGGGAAGGCGTCAAAT 60.304 57.895 2.23 0.00 0.00 2.32
2716 3685 0.032678 ACAGTCCTCGCACAACAGAG 59.967 55.000 0.00 0.00 0.00 3.35
2787 3761 3.243602 GCCACCTTGTTTGTCCGTTTTAT 60.244 43.478 0.00 0.00 0.00 1.40
2832 3806 2.864968 CGGACACAAAACGGACAAAAA 58.135 42.857 0.00 0.00 0.00 1.94
2860 3834 2.119484 AAACTTGGGTCGCGGATGGA 62.119 55.000 6.13 0.00 0.00 3.41
2896 3870 0.802494 GTCCGCATGATGTCCGTTTT 59.198 50.000 0.00 0.00 0.00 2.43
3263 4255 1.381872 GAGGAGGAGCCACTGCCTA 60.382 63.158 0.00 0.00 40.02 3.93
3314 4306 0.529773 GCCATTCGTGTATCTGCCGA 60.530 55.000 0.00 0.00 0.00 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.