>input_sequence_51188
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----------------------------------------------ATGCCCAATCACAGTCACAACCAATCTCCTAATC
TAAATCGCACCCAAAATCTAACCCAAATCCACGGCCCAACTTTGACGGTACGGCCATGGACTCGTAGAAG--TACTCACC
ACCCGCGAGTGCAGCACCGCGACCCCGATCCACTCCGGCGAGCCCCCGAGGCCACTGTCATGGCCGCGGACAGCTGCCAC
TCCCGCAGCATGTCGTGGTTCGTCAAGTCCTGCATCCCTGCCGACCCCGACCGCCACATCTCCGTCCCCGTCCCCGTCCC
AGTCCCCATCTCCGCTCCTGCTGCTGCTTCCTCCACCACCAGCCTCTGCTTCCCCGCCCAACCACCACCGCCCATCTCCG
CGCTGCCCGACGACCTCATCCTCGAGTGCCTTGTCCGCGTGCCCCGGGTCTCCCTCCCGCCGATCCCCGCCGTCTGCCGC
CGCTTTGCCGACCTCCTCGCGTCCCACGCCTTCCTCCAGCTCCGCCGCGCGCGGGGCCAGCTCCAGCCCTCCCTGCTCGC
CGTCTCCGTCCCCGACCACGGGGGCGCCTTTGCCCAGGCGCTGCTCCAGTTCCGGCCGGAGCAGCAGCAGCTCCAGGTCG
CCGCGCTGCCGCTGCCGCTGGCTCTGCTGCATTGCGGCCGCTCCGTGTTCGCGCACGCGCGCGCCGTCGCGCTGGGCCGC
GACATCTTCCTCGTCGGCCGCGGCGCCACGCTGCGGGTGGACGCGCTCACGGGCGCCGCGCGCGCGTGCGCGCCCACGCT
GTTCCCGCGGAAGAAGTTCGCGGCCGCCGCCGTGGGAGGGCGGATCTACGTCGCCGGCGGGTCCGCGCGGACCGCGGCGG
TCGAGGAGTACGACCCGGTGGCGGACGCGTGGCGCGTGGTCTCCGAGGCGCCGCGGAGGAGGTACGGGTGCGCCGGGGCC
GGGGCCGGCGGGGTGTTCTACGTGGCCGGCGGGGTCGCGGTGTCCGGCGACGGCGCGCGGGCGCTCGGGGCGCACGTGTG
CGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGGCACTTGGGCGCGCCCGCGGGCGCTGCCGGGCGGCGGCTGCGTCG
TGGGCGCCTGCGGCGTCGGTGACCATCTCTACGTGGTGGCCAGCCACGCGGTGGAGCTCTCCTTCTGGAGGTGGCACGGC
GGTGCCGGCCGAGGCAGCGACCTCAGAGCTGGTGGCGGGTGGGTGGCGCTCGAGGCCCCGCCCATGCCGAGGGGGTCGGT
GGGGCTGGGCATGGCGGTGCGGGTGACGATGGCTGGCATCGGGCGTGAGACAGTGACAGCCGTAATGAGCGCGGCGGCAG
TCCGGGGCCACAATGCGGCGGGCGCCGGCCCGTTCGAAGGGATGGTGCTGGCGTACGACATCGCCGGCGGCAAGTGGAGC
CGCGCGCCTGACCTGCCACCCGGGTTCCGGCGAGCCGCTTGTGCGGGGGTCGAGTGCTGA--------------------
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>chr5D_1_TraesCS5D01G154900
CCACATGCCCTCCGATGACGTGAGATGCACAACCGGGGCGAGGGTTAGGCGAGGAGAACCTTATTCCACTTTCGACGTCG
CAGCCTTGCCTTTCCAAGCAGGACACAAACTATAAACAAACTCAAAATAACACCTAAAAACGAAGGAGATGCCCTTCCGT
CAGCAATGGTCGGTCCCACTGCGCCTCCATGATCTAAGACCACAGAAGACAAGGCAGATTGGCAGCCGGGCCGATGGAAG
GCGGGAAAACCCTAGATGGCTGAGAGTTGCATAC-GGGGAGGAG------------------------------------
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-------------------------------------------------TAAAATATTTGGTCAACCCGAGGTTATGCCA
ATTTCACATCACTTTTTTTGCGGGAGCCAATTTCACATCACCAACAGCTAAATCGTTATTTTTCGAGCAACCTAACTCCT
AGTGTCTT----ACATGTTTGTAAGTGTCTGCGTCTATGTTTCACACACACACA-------AAATCCGACCCTCTTATCA
TAGCACGCTCTCTCCATTCTTAAAAAAGTGTACTTCCAACTTTATTGTATGATCAAATTATCTCAAAGTTTGACCGAGTT
TATGAAAAAGTATATCAATGTTTATGAAACCAAGTAGGTATGCGATAAATATATTTTATCATGAATCTAATGCTACTAAT
TTGACGGAATAAATGTTGTATGGTCAAATTATCTCAAAGTTTGACCGCGTTTATGCAAAAATATATCAATGTTTATGAAA
CCAAGTAGGTATATGATAAATATATTTTATCATGAATCTAATGCTACTAATTTGACGGCATAAATATTGATGTATTATTA
TATAAATACGGTCAAACATAAAAAGGCGACCCATTTTT-----------------ATGAAATAGGTGTATTTACAGTACT
TGACAATGTATGGTGTTGTTTCGTCAAAACTACATAGATATAGCCAAATCATTTTGTTTTGTTTTGTGAAAATCCTGACT
TGAATAAGCAATCAAATCCGCCATCCGCCGCACCAGCACAGTGCCCAACGGCTGGT------------------------
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----------------------------CCCCGCTACTCCTCCTCAATGCCCAATCACAGTCACAACCAATCTCCTAATC
TAAATCGCACCCAAAATCTAACCCAAATCCACGGCCCAACTTTGACGGTACGGCCATGGACTCGTAGAAG--TACTCACC
ACCCGCGAGTGCAGCACCGCGACCCCGATCCACTCCGGCGAGCCCCCGAGGCCACTGTCATGGCCGCGGACAGCTGCCAC
TCCCGCAGCATGTCGTGGTTCGTCAAGTCCTGCATCCCTGCCGACCCCGACCGCCACATCTCCGTCCCCGTCCCCGTCCC
AGTCCCCATCTCCGCTCCTGCTGCTGCTTCCTCCACCACCAGCCTCTGCTTCCCCGCCCAACCACCACCGCCCATCTCCG
CGCTGCCCGACGACCTCATCCTCGAGTGCCTTGTCCGCGTGCCCCGGGTCTCCCTCCCGCCGATCCCCGCCGTCTGCCGC
CGCTTTGCCGACCTCCTCGCGTCCCACGCCTTCCTCCAGCTCCGCCGCGCGCGGGGCCAGCTCCAGCCCTCCCTGCTCGC
CGTCTCCGTCCCCGACCACGGGGGCGCCTTTGCCCAGGCGCTGCTCCAGTTCCGGCCGGAGCAGCAGCAGCTCCAGGTCG
CCGCGCTGCCGCTGCCGCTGGCTCTGCTGCATTGCGGCCGCTCCGTGTTCGCGCACGCGCGCGCCGTCGCGCTGGGCCGC
GACATCTTCCTCGTCGGCCGCGGCGCCACGCTGCGGGTGGACGCGCTCACGGGCGCCGCGCGCGCGTGCGCGCCCACGCT
GTTCCCGCGGAAGAAGTTCGCGGCCGCCGCCGTGGGAGGGCGGATCTACGTCGCCGGCGGGTCCGCGCGGACCGCGGCGG
TCGAGGAGTACGACCCGGTGGCGGACGCGTGGCGCGTGGTCTCCGAGGCGCCGCGGAGGAGGTACGGGTGCGCCGGGGCC
GGGGCCGGCGGGGTGTTCTACGTGGCCGGCGGGGTCGCGGTGTCCGGCGACGGCGCGCGGGCGCTCGGGGCGCACGTGTG
CGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGGCACTTGGGCGCGCCCGCGGGCGCTGCCGGGCGGCGGCTGCGTCG
TGGGCGCCTGCGGCGTCGGTGACCATCTCTACGTGGTGGCCAGCCACGCGGTGGAGCTCTCCTTCTGGAGGTGGCACGGC
GGTGCCGGCCGAGGCAGCGACCTCAGAGCTGGTGGCGGGTGGGTGGCGCTCGAGGCCCCGCCCATGCCGAGGGGGTCGGT
GGGGCTGGGCATGGCGGTGCGGGTGACGATGGCTGGCATCGGGCGTGAGACAGTGACAGCCGTAATGAGCGCGGCGGCAG
TCCGGGGCCACAATGCGGCGGGCGCCGGCCCGTTCGAAGGGATGGTGCTGGCGTACGACATCGCCGGCGGCAAGTGGAGC
CGCGCGCCTGACCTGCCACCCGGGTTCCGGCGAGCCGCTTGTGCGGGGGTCGAGTGCTGACAGCGTGGGCCACTGACATT
TGTGCCTGTTCGGTGGGTTTGACAACACACGGTGTGCAAGTAAACACTGGGTTTGTTTGATTTGATTTGACTTGATGCTA
CATTTTCGTGTATTGTTATTGAGCGGAGGCTGGTTTATTCGAGTACAGTTCTTAACTATTGATGCCGAAATTTGGCGTCG
TATTCAGTTTTCCAAACTAGCCGGGGCCATCGTCATGGGTCGTAGCCATGGATGACCACGACTCGAATTTGACGCCTTCC
CACCCTCTGTTGTGCGAGGACTGTTAGGCCAACTCCACCGCGC--GACCCTATCCTGTCCGGTCCCGTC---CGTTTGAG
ATAAAACGGACAAACAAGGTGGCCCAGCGCGCGGGAGCAAACGGATTTTTGTCCGTTTTGTGTCCGCTTTCGATCCATCC
GCGACCCAAGTTTGCGCCGCTTTTGGGGTAAAACGGACATCATGCGGACGCGCGGGTCGTCTGCGCGTGTCCT-CCCTGG
CCCGCCCGTCGGTGGCACAGGACGGGCCTTTTTCTATCCGCCCCCC-T-CCCTCCCTTCGGCCGCA-CCCC-C-CCACTC
TTCCCCTCGCT------GC------CGCCGCCGCTGCCATTGCAGCCGTGCAGTTTGGACGCGAGCTCGCCCAGCCCCTT
CCCCTCGGCGCCGCCGAGCTACCCAACCACGGCCACCTGGTTTGCGCACCCGCCGGCCGGATTTGGGGCGGATCCGGTCG
GTCTTGAGCTCGCCCGACTGTGGGAGGTCGGGCCGTGCCATGGACTGGCCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGTAGGCAGTGGCTCCTCCTCTAGCTGCTCGGATCTGCACCGTCGGTGGTCCGTCGGCAGATACACGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCG
>chr5B_227
CGGCGC--------------------------------------------------------------------------
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-----------------------------------------------------------------------CGATAGAAG
GCGGGAAAACCCTAGATGGCTGAGAGTTGCTTGTGGGGGAGGAGTAAGAGCTATAGCCGGACTTGGCAAATCCGACCCCT
CAAACGCCCGCGAACGCGAACAGGCGCACGCCTCAAACTTGGTACTATGCATCCGAGTCTCTCATATTTCATCCCCTAGA
TCTATACAAAGCATGCAAAACAAATCTACGTACTATGACACGCTAGCTACGCTTCATCGTCGGAGATGACCACAACGTCT
GTGCCGGGCGCCGGGTGGACGGGCGCGTAGAAGGGCTCCTCCTCCTCCTTACCCGCCAGCGTGGGCGCATGGCTACTAGT
GGTGATGGACGAAGAGTGGAAAGCGGCGGCGGCGTTCGACTTAAATAGCCGGGCTAGGCAACGCGGTCCGCCGGAGCGGC
GCCGCACGAAACCATCGGTCGGATGGAGGAGACGAGCTTTAGACCGCCGGGTTTTAGAGTGTTTTCCTGTGGGACCCCAT
CGTCGGTCCGACGTGACGGACGTGCCCGGGCGTTTGAGACCCCGTTTGCGTCGCTTTTTTGTGATTGGTCGACCGGGGCG
TCCGTCCGGGCGTTTGAGGCGGGTTTGAAGCGTCCGACTGTAGATGCTCTAAAATATTTGGTCAACCTGAAGTTATCCCA
GCTTCAT-----------------------------ATCACCACCAGCTAAATCGTTATTTTTCGAGCAACCCAATTCGT
AGAAATGACTTAACATATTTGTAAGCGTCTGCGTCTATATTGCGCGCGCACACACAGAGAGAAATCCGAAACTCTTACCA
CTTAC---------------------------------------------------------------------------
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----------------CATACATAGGCGACTTGACATCACCCACTTTTATATGACATGAAATTGGAGTATTTACAATACT
T-ACAATATATGGTGTTGTTTCGTCAAAACTAAGAAAAAATAGCCAAATCATTTTGAATC--------------------
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-------------------------CTGACTTGAATTTCAAACAAGCAATCAACTCCGTCCTTTGCCGGTGGGGGCACCG
CCGCACCGGCAGAGTGCCCAACGGCTGGCCCCGCTACTCCTCCTCAATGCCCAATCACAGTCACAACCCATCTGTTAATC
TAAATCGCACTCAAAATCTAACCCAAATCCACGGCCGAACTTTGACGGTACAGCCATAGACTCGTAGAAGCATACTCACC
ATCGGCGAATGCACCACCGCGACCCCGATCCACTCCGGCGAGCTCCCGAGGCCACTGGCATGCCCGCGGACAGCTGCCAC
TCCCGTAGCATGTCGTGGTTCGTCAAGTCCTGCATCCCTGCCGACCCCGACCGCCACATCTCCGTCCCCGTCCCCGTCCC
AGTCCCCATCCCCGCTCCTGCCGCTGCTTCCTCCACCACCAGCCTCTGCTTCTCCGCCCAACCACCACCGCCCATCTCCG
CGCTGCCCGACGACCTCATCCTCGAGTGCCTTGTCCGCGTGCCCAGGGTCTCCCTCCCGCCGCTCCCCGCCGTCTGCCGC
CGCTTCGCCGACCTCCTCGCGTCCCACGCCTTCCTCCAGCTCCGCCGCGCGCGCGGTCAGCTCCAGCCCTCCCTGCTCGC
CGTCTCCGTCCCCGACCACGGCGGCGCCTTTGCCCAGGCCCTGCTCCAGTTCCGGCCGGAGCAGCAGCAGCTCCAGGTCA
CCGCGCTGCCGCTGCCGCTGGCCCTGCTGCATTGCGGCCGCTCCGTGTTCGCGCACGCGCGCGCCGTCGCGCTGGGCCGC
GAGATCTTCCTCGTCGGCCGCGGCGCCACGCTGCGGGTGGACGCGCTCACGGGTGCCGCGCGCGCGTGTGCACCCACGCT
GTTCCCGCGGAAGAAGTTCGCGGCCGCCGCCGTGGGAGGGCGGATCTACGTCGCCGGCGGGTCCGCGCGGACCGCGGCGG
TCGAGGAGTACGACCCGGTGGCAGACGCGTGGCGCGTGGTGTCCGAGGCGCCGCGGAGGAGGTACGGGTGCGCCGGGGCC
GGGGCCGGCGGGGTGTTCTACGTGGCCGGCGGGGTCGCGGTGTCCGGCGACGGAGCGCGGGCGCTCGGGGCGCACGTGTG
CGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGGCACCTGGGCGCGCCCGCGGGCGCTGCCCGGCGGCGGCTGCGTCG
TGGGCGCCTGCGGCGTCGGCGACCATCTCTACGTCGTGGCCAGCCACGCGGTGGAGCTTTCCTTCTGGAGGTGGCACGGT
GGTGCCGGCCGAGGCAGCGATCTCAGAGCTGGTGGCGGGTGGGTGGCGCTCGAGGCCCCGCCCATGCCGAGGGGGTCGGT
GGGGCTGGGCATGGCGGTGCGGGTGACGATGGCTGGCATCGGGCGTGAGACAGTGACAGCCGTAATGAGCGCGGCGGCAG
TCCGGGGCCACAATGCGGCGGGCGCCGGCCCGTTCGAAGGGATGGTGCTGGCGTACGACATCGCCGGCGGCAAGTGGAAC
CGCGCGCCGGACCTGCCACCCGGGTTCCGGCGAGCCGCCTGTGCGGGCGTCGAGTGCTGACAGCGTGGGCCACTGACATT
TGTGGCTGTTCGGTGGGATTG-----ACACGGTGTGCAAGTAAACGCTGGGTTTGTTTGATTTGATTTGACTTGATGCTA
CATTTTCGTGTATTGTTATTGAGCTGAGGTTGGTTTATTCGAGTACAGTTCTTAACTATTGATGCCGAAATTTGGCGTCG
TATTCAGTTTTCCAAACTAGCCGGGGCCATCGTCATGGGTCGTG-CCATGGATGACGT-GACTCGAGTTTGACGCCTTCC
CACCGTCT------------------------------------------------------------------------
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>chr5A_951
CCGCA---------------------------------------------------------------------------
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--------------------------------CCAGCACAGTGCCCAACGGCTGGCCCCCCACCTTCTCAATGCCCAATC
ACAATCACAACCCATCTGCTAATCTAAATTTTGATAAAAATATTTAACTAATAAAATGTTCATGCATGTCATAAAAAATT
ATATTATTAAAACTATGTTCAAATACGAATCCAATTATATAATTTTTGTTGACATGCATTAATATTTTATTAGTGAAACC
TTTGGTCAAAATTTGACACAAATTAGAAAAAGGACCAATAAATCAGGTCGGAGTCAAAATTACATAGAAAATAGCCAAAT
CGTTTTATTTTATTTAATAAAAATTCTGACTTGAATTTCAAACAAGCAATCAACTCCGCCCTTTGCTGGTGGGGGCACCG
CCGCACCGGCACAGAACCCAACGGCTGGCCCCTTTTTTCTCTTCAC--GCCCAATCGCAATCACAACCCATCTCCTAATC
TAAATCGCACTCAAAATCTAACCCAAATCCACGGCCCAACTCTGACGGTACGGCCATGGACTCGTAGAAG--TACTCACC
ATCGGCGAATGCAGCACCGCGACCCCGATCCACTCCGGCGAGCTCCCGAGGCCACTGTCATGGCCGCGAACAGCTACCAC
TCCCGCAGCATGTCGTGGTTCGTCAAGTCCTGCATCCCTGCCGACCCCGACCGCCACATCTCCGTCCCCGTCTCAG----
--------TCCCCGCTCCTGTCGCTGCTTCATCCACCACCAGCCTCTGCTTCCCCGCCCAACCACCACCGCCCATCTCCG
CGCTGCCCGACGACCTCATCCTCGAGTGCCTTGTCCGCGTGCCCAGGGTCTCCCTCCCGCCGCTCCCCGCCGTCTGCCGC
CGCTTCGCCGACCTCCTCGCGTCCCACGCCTTCCTCCAGCTCCGCCGCGCGCGCGGCCAGCTCCAGCCCTCCCTGCTCGC
CGTCTCCGTCCCCGACCACGGCGGCGCCTTCGCCCAGGCCCTGCTCCAGTTCCGGCCGGAGCAGCAGCAGCTCCAGGTCA
CCGCGCTGCCGCTGCCGCTGGCTCTGCTGCATTGCGGCCGCTCCGTGTTCGCGCACGCGCGCGCCGTCGCGCTGGGCCGC
GACATCTTCCTCGTCGGCCGCGGCGCGACGCTGCGGGTGGACGCGCTCACGGGCGCCGCGCGCGCGTGCGCGCCCACGCT
GTTCCAGCGGAAGAAGTTCGCGGCGGCCGCCGTGGGAGGGCGGATCTACGTCGCCGGCGGGTCCGCGCGGACCGCGGCGG
TCGAGGAGTACGACCCGGTGGCGGACGCGTGGCGCGTGGTCTCCGAGGCTCCGCGGAGGAGGTACGGGTGCGCCGGGGCC
GGGGCAGGAGGTGTGTTCTACGTGGCCGGCGGGGTCGCGGTGTCCGGCGACGGTGCGCGGGCGCTCGGGCCGCACGTGTG
CGCCGGGTCGGTGGACGCGCTGCACGTCGCGTCCGGCAGTTGGGCGCGGCCGCGGGCGCTGCCCGGCGGCGGCTGCGTCG
TGGGCGCCTGCGGCGTCGGCGACCATCTCTACGTGGTGGCCAGCCACGCGGTGGAGCTCTCCTTCTGGAGGTGGCACGGC
GGTGCAGGTCGAGGCAGCGATCTCAGAGCTGGTGGCGGGTGGGTGGCGCTCGAGGCCCCGCCCATGCCGAGGGGGTCGGT
GGGGCTGGGCATGGCGGTGCGCGTGACGATGGCGGGCATCGGGCGTGAGACAGTGACAGCCGTAATGAGCGCGGCGGCAG
TCCGGGGCCACAATGCGGCGGGGGCCGGCCCGTTCGAAGGGATGGTGCTGGCGTACGACATCGCCGGCGGCAAGTGGAGC
CGCGCGCCGGACCTGCCACCCGGGTTCCGGCGAGCCGCCTGTGCGGGCGTCGAGTGCTGACAGCGTGGGCCACTGACATT
TGTGCCTGTTCGGTGGGTTTC-----ACATGGTGTGCAAGTAAACACTGGGTTTGTTTGATTTGATTTGACTTGATGCTA
CATTTTCGTGTATTGTTATTGGGCGGAGGCTGGTTTATTCGAGTACAGTTCTTCACTATTGATGCCGAAATTTGGCGTCG
TATTCAGTTTTCCAAACTAGCCGGGGCCATCGTTATGGGTCGTGGCCATGTATGAAGC-GACTCGAGTTTGACGCCTTCC
CACCGTCTGTTGTGCGAGGACTGTTAGAGCAACCCAC-------------------------------------------
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>chr1D_2735
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----------------------GTTAGGCCAACTCCACCGCGC--GACCCTATCCTGTCCGTTCCCGTC---CGTTTGGG
GTAAAAGGGACAAACCGGGTGGCCCAGCGCGCGGGAGCAAACAGACTTTTGTCCGTTTTGTGTCCGCTTTCGACTCATCC
CCGGCCCAAGTTTGCGCCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCCGGCCGTCTGCGCGTGTCCTCCCCTGG
CCCGCCCGTCGGTGGCACAGGGCGGGCCTTTTTCTATCCG--CCCCCT-CCCTCCCTCCGGCCGCA-CCCCACTCCACTC
TTTCCCTC---------GC------CGCCGCCGCTGCCATTGCAGCTGTGCAGCTCGGACGCGCGCTCGCCCAGCCCCTT
CCCCTCGGCGCCGCCGAGCTACCCAACCACGGCCACCTGGTTTGCACACCCGCCGGCCGGATTTGGGGCGGATCCGGTCG
GTCTTGAGCTCGCCCGGCTGTGGGAGGCTGGGCCGCGCCATGGACTGGCCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCATTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACATGA
ATGGAGGCCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGTCGGCGCACCGTTGCCACTCATTAAGTGGGACCACTGCCC
AAGGATGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCC--
>chr6A_2736
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-----------------------TTAGGCCAACTCCACCGCAC--GACCCTATCCTGTCCGGCCCCGTC---CGTTTGGG
GTAAAAGGGACAAAAAAGGCGGCCCAGCGCGCGGGAGCAAACGGACTTTTGTCCGCTTTGTGTCCGCTTTCGACCCATCC
GCGGCCCAAGTTTGCGCCGCTTTTGGGGTGAAACGGACACCACGCGGATGCGCGGGTCGTCTGCGCATGTCCTCCCCTGG
CCCGCCCGTCGGTGGCACAAGACGGGCCTTTTTCTATCCGCCCCCC-T-CCCTCCCTCCGGCAGCA-CCCC-CTCCACTC
TTCCCCTCACTGCCGCCGC------CACCGCCGCTGCCATTGCAGCCGTGCAGTTCAGACGCGAGCTCGCCCAACCCCTT
CCCCTCGGTGCCACCGAGCTACCCAACCACGGCCACCTGGTTTGCGCACCCGCCGGCCGGTTTTGGGGCGGATCCGGTCG
GTCTTGAGCTCGGCCGGCTGTGGGAGGCCGGGCCGCGCCATGGACTGGCTGGGCACCTTGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACACGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGTGCACCGTTGCCACTCATTAAGTGTGACCACTGCCC
AAGGATGGTCGTGCGCCACGTGTCTACAACGCCGGAACATCCCG
>chr2D_2736
TTAGCCAACTCCA-------------------------------------------------------------------
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----------------------------------CCGCCGCGC--GACCCTATCCTGTCCGGCCCCGAC---CATTTGAG
TTAAAACGGACAAACGAGGCGGCCCAGCGCGCGGAAGCAAACAAACTTTTGTCCGTTTTGTGTCAGCTTTCGACCCATCC
GCGGCCCAAGTTTGCGCCGTTTTTGGGGTGAAACGGACACCACGCGGACGCGCGGGTCGTCTGCGCGTGTCCTCCCTT--
CCCGCCCGCCGGTGGCACATGGCGGGTTTTTTTCTATCCG--CCCC-T-CCCTCCCTCCGGCCGCA-CCCC-CTCCACTC
TTCCCCT---TGCTGCTGC------CGCCGCCGCTGCCATTGCAGCCGTGCAGTTCGGACGCGAGCTCGCCCAGCCCCTT
CCCCTCGGCGCCGCCGAGCTACCCAACCACGGCCACCTGGTTTGCGCACCCGCCGGCCGAATTTGGGGCGGATCCG-TCG
GTCTTGAGCTCGCCCGGCTGTGGGAGGCCGGGCCGCGCCATGGACTGACCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACACGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGCGCGCCGCGTGTGTACAACGCCGGAACATCCCG
>chr2A_2736
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-----------------------TTAGGCCAACTCCACCGAGC--GACCCTATCCTGTCCGACCCCGTC---CATTTGGG
GTAAAACGGACAAACGAGGCGGCCCAGCGCGCGGGAGCAAACGGACTTTTGCCCATTTTGTGTCCGCTTTCGACCCATTC
ACGGCCCAAGTTTGCGCCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCGAGTCGTCTGCGCGTGTCCTCCCCTGG
CCCGCCCGTCGGTGGCACAGGGCGGGCCTTTTTCTATCCG--CCCC-T-CCCTCCCTCCGGCCGCA-CCCC-CTCCACTC
TTCCCCTC---------GC------TGCCGCCGCTGCCATTGCAGCCGTGCAGTTCGGACGCGAGCTCGCCCAGCCCCTT
CCCCTTGGCGCCACCGAGCTACCCAACCACGACCACCTGGTGTGCGCACCCGCCGGCCGGATTTGGGGCGGATCCGGTCG
GTCTTGAGCTCGGCCGGCTGTGGGAGGCCAGGCCGCGCCATGAACTGGTCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCAGCACCGTCGGTGGTCCACCGGCAGATACACGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGTGCGCCGCATGCCTACAACGCCGGAACATCCCG
>chr6D_2737
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------------------------TAAGCCAACTCCACCGCGC--GATCCTATCCTGTCCGGTCCCGTC---TGTTTGGG
GTAAAACGGACAAACGAGGCGGCCCAGCGCGGGGAAGCAAACGGACTTTTGTTCGTTTTGTGTCCGCTTTCGACCCATCC
GCGGCCCAAGTTTGCGCTGCTTT-GGGGTGAAACGGACACCACGCGGACACGCGAGTCGTCTGCGCTTGTCCTCCCCTGG
CCCGCCCGTCGGTGGTACAGGGCGGGCCTTTTTCTATCCGC-CCCCCT-CCCTTCCTCCGGCCGCA-CCCC-TTCCACTC
TTTCCCTC---------GCTGTCGCCGCCGCCGCTGCCATTGCAGCTGTGCAGTTCGGACGCGAGCTCACCCAGCCCCTT
CCCTTCGGCGCCGCCGAGCTACCCAACCATGGCCACTTGGTTTGCGCACCCGCCGGCCGGATTTGGGGCGGATCTGGTTG
GTCTTGAGCTCGCCCGGCTGTGGGAGGCCGGGCCGCGCCATGGACTGGCCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGCCTCCTCCTCTAGCCGCTCGGATCTGCACCTTCGGTGGTCCGCCGGCAGATACACGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGCGCATCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCG
>chr7D_2737
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------------------------TAGGCCAACTCCACCGCGC--GACCCTATCCTGTCCGCCCCCGTC---CATTTGGG
GTAAAACGGACAAACGAGGCGGCGCGGCGCGCGGGAGCAAACGGCCTTTTGTCCGTTTTGTGTCCACTTTCGACCCATCC
GCGGCCCAAGTTTGCGCCGCTTTTGGGCTGAAACGGACACCATGCGGACGCGTGGGCCGACTGCCCGTGTCCTCCCCTGG
CCCGCCCGTCGGTGGCACAGGGCGGGCCTTTTTCTATCTG--CCCCC-----TCCCTCCGGCCGCACCCCC-CTCCACTC
TTCCCCTC---------GCTGTCGCT---GCCGCTGCCATTGCAGCCGTGTAGTTCGGACGCGCGCTCGCCCAGCCCCTT
CCCCTCGGCGCCGCCGAGCTACCCAACCATGGCCACCTGGTTTGCGCACCCGCCGGCCGGATTTGGGGCGGATCCGGTGG
GTCTTGAGCTCGCCCGGCTGTGGGAGGCCGGGCCGCGCCATGGACTGGCCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTTGGTGGTCCGCCGGCAGATACATGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGTGACAACTGCCC
AAGGAAGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCG
>chr3D_2738
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-------------------------AGGCCAACTCCACCGCAC--GACCCTATCCTATCCGCACCCGTCGTCCGTTTGGG
GTAAAACGGACAAACCAGACGGCCCAGTGCGCGGGAGCAAACGGACTTTTGTCCGTTTTGTGTCCGCTTTCGACCCATCC
CA-GCCCAAGTTTGCGCCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCGGGCCGTCTGCGCGTGTCCTCCCCTGG
CCCGCCCGTTGATGGCACAGGGCGGGCCTTTTTCTATCCG--CCCCCCGCCTTCCCTCCGGCCGCACCCCC-CTCCACTC
TTCCCCTC---------GCTGCCGCCGCCGCCGCTGCCATTGCAGCCGTGCAGTTCGGACGCGCGCTCGCCCAGGCCCTT
CCCCTCGGCGCCGCCGAGCTACCCAACCACGACCACCTGGTTTGCGCACCCGCCGGCCCGATTTGGGGCGGATCCGGTCG
GTCTTGAGCTCGCCCGGCTGTTGGAGGCCGGGCCGCGCCATGGACTGGCCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCGGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATACACGA
ATGGCGGTCGGCCGGGCTCGGTGCTT-GCCCAAAAGCTCGTCGGCGCATCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCG
>chr7A_2738
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-------------------------AGGCCAACTCCACCGCGC--GACCCTATCCTGTCCGGCCCCGTC---CGTTTGGG
GTAAAAGGAACAAAAAAGGCGGCCCATCGCGCGGGAGCAAACGGACTTTTGTCCGCTTTGTGTCCGCTTTCGACCCATTC
CCGGCCCAAACTTGCGCCGCTTTTGGGGTGAAACGGACACCACACGGACACGCGGGTCGTCTGCGCGTGTCCCCCCCTGG
CCCGCCCGTTGGTGGCACAAGACGGGCCTTTTTCTATCCG--CCCCCT-CCCTCCCTCCGGCCGCA-CCCC-CTCCACTC
TTCCCGTC---------GCTGCCGCCGCCGCCGCTGCCATTGCAGCCGTGCAGTTCGGACGCGAGCTCGCCCAACCCCTT
CCCCTCGGCGCCGTCGAGCTACCCAACCACGGCCACCTGGTTTGCGCACCCGTCGGCCGGTTTTGGGGCGGATCCGGTCG
GTCTTGAGCTCGGCCGGCTGTGGGAGGCCGGGCCGCGCCATGGACTGGCCGGGCACCTCACCGGAA-GCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCATCGGTGGTCCGCCGGCAGATACACGA
ATGGCGGTCGACCGGGCTCGGTGCTTTGCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGTGCGCCGCGTGTCTACAACGCTGGAACATCCCG
>chr5D_2740
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---------------------------GCCAACTCCACCGCCCAAGACCCTATCCTGTCCGCCCCCGTC---CGTTTGGG
GTAAAACGGACAAACGAGGCGGCCCAGCGCGCGGGAGCAAACGGACTTTTGTCTGTTTTGTGTCCGCTTTCGACCCATCA
GCGGCCCAAGTTTGCGCCGCTTTTGAGGTGAAACGGACATCACGCGGACGCGCGGGTCGTCTGCGCGTGTCCTCCCCTGG
CCCGCCCGTCGGTGGCACAGGGCGGGCCTTTTTCTATCCG--CCCCCCTTCCTTCCTCCGATCGCA-CCCC-CTCCACTC
TTCCC-TC---------GCTGCCGCCGTCGCCACCGCCATTGCAGCCGTGCAGTTCGGACGCGCGCTCGCCCAGCCCCTT
CCCCTCGGCGCCGCCCCTCGACCCAACCATGGCCACCTGGTTTGCGCACCCGCCGGCCGGATTTGGGGCGGATCCGGTCG
GTCTTGAGGTCGCCCGGCTGTGGGAGGCCGGGCCGCGCCATGGACTGGCCGGGCACCTCGCCGGAAGGCCCTGGCAGGGC
CGCAAGGCCACATGCAGGCAGTGGCTCCTCCTCTAGCCGCTCGGATCTGCACCGTCGGTGGTCCGCCGGCAGATAAACGA
ATGGCGGTCGGCTGGGCTCGGTGCTT-GCCCAAAAGCTCGCCGGCGCACCGTTGCCACTCATTAAGTGCGACCACTGCCC
AAGGATGGTCGTGCGCCGCGTGTCTACAACGCCGGAACATCCCG
>SNPs
-----SSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S----
------------------------------S-SS----------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------S--S-----S---
SS----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------S----------------------------S--S--S-
--SSSSSS--------S--------S------------S--S-S-S-S---------------------SS------S--
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----S-S-------SSSSSS-S------------------------S--S---------S----
-S-----S------------------------SSS-S-S-----------------SS-SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------S-----------
----------S---------------------------------------------------------------------
-S-S----S----------------------------------S------------------------------------
--------------------------------------------------------------------------------
----------S----------S----------------------------------------------------------
--------------------------------------------S-----------------S-----------------
-----S-----------------------------------------------S--------------------------
---------------------S-----------------S---------------------------------------S
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-----------------------------------------------------S--------------------------
---------------------------------------------------------------S----------------
-------------------S------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
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--------S-----------------------------S--------S--------------------------------
---------------------SSSSS------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------SSS-------S-------------
----S---------------------------------------------------------------------------
S--------------------------------------------S---------------------------S------
---S-------------------------S--------------------------------------------------
---------------------------------------------------------S----------------------
--------S----------------------------------------------S------------------------
--------------------------------------------------------------------------------
----------------S----------S-------S--------------------------------------------
--------------S----------------------S---------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------
>forward_27
-------CCCTCCGATGACGTGAGATG-----------------------------------------------------
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>reverse_2262
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---------------------TGCTGCTTCCTCCACCAC-----------------------------------------
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--------------------------------------------
>forward_29
---------CTCCGATGACGTGAGATGCA---------------------------------------------------
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>reverse_3060
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-------------------TGACCATCTCTACGTGGTGG-----------------------------------------
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--------------------------------------------
>forward_30
----------TCCGATGACGTGAGATGCAC--------------------------------------------------
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>reverse_3141
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--------------------CCTCAGAGCTGGTGGCGG------------------------------------------
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--------------------------------------------
>forward_1547
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-------GCAATCAAATCCGCCATCCG-----------------------------------------------------
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>reverse_3685
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----CTCTGTTGTGCGAGGACTGT--------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------
