Multiple sequence alignment - TraesCS5D01G125900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5D01G125900 chr5D 100.000 2918 0 0 1 2918 192951513 192948596 0.000000e+00 5389.0
1 TraesCS5D01G125900 chr5D 85.030 167 20 4 2572 2736 192948888 192948725 6.470000e-37 165.0
2 TraesCS5D01G125900 chr5D 85.030 167 20 4 2626 2789 192948942 192948778 6.470000e-37 165.0
3 TraesCS5D01G125900 chr5D 95.455 44 2 0 900 943 192950565 192950522 1.450000e-08 71.3
4 TraesCS5D01G125900 chr5D 95.455 44 2 0 949 992 192950614 192950571 1.450000e-08 71.3
5 TraesCS5D01G125900 chr5B 96.869 2108 60 3 1 2105 198029930 198027826 0.000000e+00 3522.0
6 TraesCS5D01G125900 chr5B 83.607 183 23 7 2192 2369 44134159 44134339 6.470000e-37 165.0
7 TraesCS5D01G125900 chr5B 83.429 175 28 1 2192 2365 354509215 354509041 8.370000e-36 161.0
8 TraesCS5D01G125900 chr5B 78.333 180 31 8 2191 2365 335951610 335951786 3.070000e-20 110.0
9 TraesCS5D01G125900 chr5B 95.833 48 1 1 901 948 198028983 198028937 3.120000e-10 76.8
10 TraesCS5D01G125900 chr5A 96.167 1983 71 4 1 1982 250561338 250563316 0.000000e+00 3236.0
11 TraesCS5D01G125900 chr5A 95.775 142 2 3 1980 2121 250566582 250566719 2.930000e-55 226.0
12 TraesCS5D01G125900 chr5A 93.750 48 2 1 901 948 250562285 250562331 1.450000e-08 71.3
13 TraesCS5D01G125900 chr7B 77.918 317 58 10 2191 2500 622518257 622518568 1.380000e-43 187.0
14 TraesCS5D01G125900 chr7B 80.090 221 24 9 2701 2918 622519122 622519325 2.340000e-31 147.0
15 TraesCS5D01G125900 chr7B 83.478 115 15 4 2626 2736 622519099 622519213 1.430000e-18 104.0
16 TraesCS5D01G125900 chr3A 81.364 220 38 3 2192 2409 614675729 614675511 2.990000e-40 176.0
17 TraesCS5D01G125900 chr6B 77.903 267 52 7 2192 2455 687170231 687169969 3.010000e-35 159.0
18 TraesCS5D01G125900 chr6D 79.638 221 42 3 2192 2410 395025824 395026043 3.890000e-34 156.0
19 TraesCS5D01G125900 chr2A 77.122 271 58 4 2192 2460 26856328 26856060 1.400000e-33 154.0
20 TraesCS5D01G125900 chr3B 76.557 273 59 5 2191 2460 811709261 811709531 8.430000e-31 145.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5D01G125900 chr5D 192948596 192951513 2917 True 1172.32 5389 92.1940 1 2918 5 chr5D.!!$R1 2917
1 TraesCS5D01G125900 chr5B 198027826 198029930 2104 True 1799.40 3522 96.3510 1 2105 2 chr5B.!!$R2 2104
2 TraesCS5D01G125900 chr5A 250561338 250563316 1978 False 1653.65 3236 94.9585 1 1982 2 chr5A.!!$F2 1981

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
948 950 0.034337 CCATTGCCTGCAAAAGCTGT 59.966 50.0 8.84 0.0 39.55 4.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2684 2689 0.029834 CTGTGTGGTTTGTGCTCTGC 59.97 55.0 0.0 0.0 0.0 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
358 359 5.723295 CCACCCTTGAATACAAAGAAATGG 58.277 41.667 0.00 0.00 35.49 3.16
462 463 6.489022 CCCAAATCTGAGCATATCAATCTCAA 59.511 38.462 0.00 0.00 37.52 3.02
574 576 7.392418 AGAATCAGAAGATGAGTGAAATGTGA 58.608 34.615 0.00 0.00 42.53 3.58
599 601 8.400184 ACACCATATCTGATATGTTTGAATGG 57.600 34.615 27.27 18.55 40.76 3.16
619 621 4.020543 TGGTTGTTTTACAAGTGAAGGCT 58.979 39.130 0.00 0.00 39.00 4.58
701 703 2.297895 TACGTTCCTGGGGCAGCAT 61.298 57.895 0.00 0.00 0.00 3.79
702 704 0.978667 TACGTTCCTGGGGCAGCATA 60.979 55.000 0.00 0.00 0.00 3.14
703 705 1.149174 CGTTCCTGGGGCAGCATAT 59.851 57.895 0.00 0.00 0.00 1.78
850 852 3.207265 TGTAGTGGAAGCAAAGCAAGA 57.793 42.857 0.00 0.00 0.00 3.02
879 881 3.469008 TTGATCGACCGCCTTCATAAT 57.531 42.857 0.00 0.00 0.00 1.28
948 950 0.034337 CCATTGCCTGCAAAAGCTGT 59.966 50.000 8.84 0.00 39.55 4.40
992 994 0.251073 GGAAGCCATTGCCTGCAAAT 59.749 50.000 8.84 0.00 39.55 2.32
1074 1076 4.070552 GTCAAGGAGGCGGTCGCT 62.071 66.667 15.04 1.40 41.60 4.93
1244 1246 2.352805 GGGAAGCCACTCCACCAG 59.647 66.667 0.01 0.00 37.20 4.00
1364 1366 2.135581 TCCCGTTGTCTCCACGGTT 61.136 57.895 10.41 0.00 44.71 4.44
1380 1382 0.815615 GGTTCCAGGCATCATCGTCC 60.816 60.000 0.00 0.00 0.00 4.79
1394 1396 3.217743 GTCCCCGTCTCTAGCCCG 61.218 72.222 0.00 0.00 0.00 6.13
1395 1397 3.736224 TCCCCGTCTCTAGCCCGT 61.736 66.667 0.00 0.00 0.00 5.28
1551 1553 3.680156 GCCATGGCGAACCTCAAA 58.320 55.556 23.48 0.00 36.63 2.69
1590 1592 0.390492 TCTCGAGGCTGGCATACATG 59.610 55.000 13.56 0.00 0.00 3.21
1596 1598 1.150081 GCTGGCATACATGGAGGCT 59.850 57.895 15.28 0.00 0.00 4.58
1638 1640 0.549950 CCAACATCCAGCAGAGGGAT 59.450 55.000 0.00 0.00 45.98 3.85
1972 1974 7.121611 TGCTGATGTGTATGATTGTTTGATCTT 59.878 33.333 0.00 0.00 0.00 2.40
2027 2029 7.962964 TTCTCAGGTTCTGTGTTTAACTATG 57.037 36.000 0.00 0.00 32.61 2.23
2079 2081 3.619929 GGGAATGATCAAATGTTTGCAGC 59.380 43.478 0.00 0.00 38.05 5.25
2083 2085 4.325028 TGATCAAATGTTTGCAGCTTGT 57.675 36.364 0.00 0.00 38.05 3.16
2116 2121 8.543862 AATTATTACGTATAAAGGTGGCTAGC 57.456 34.615 6.04 6.04 32.63 3.42
2117 2122 5.540400 ATTACGTATAAAGGTGGCTAGCA 57.460 39.130 18.24 0.00 0.00 3.49
2118 2123 5.540400 TTACGTATAAAGGTGGCTAGCAT 57.460 39.130 18.24 1.63 0.00 3.79
2119 2124 4.417426 ACGTATAAAGGTGGCTAGCATT 57.583 40.909 18.24 5.70 0.00 3.56
2120 2125 4.377897 ACGTATAAAGGTGGCTAGCATTC 58.622 43.478 18.24 5.79 0.00 2.67
2121 2126 4.101119 ACGTATAAAGGTGGCTAGCATTCT 59.899 41.667 18.24 7.08 0.00 2.40
2122 2127 5.057149 CGTATAAAGGTGGCTAGCATTCTT 58.943 41.667 18.24 12.76 0.00 2.52
2123 2128 5.527582 CGTATAAAGGTGGCTAGCATTCTTT 59.472 40.000 18.24 21.09 0.00 2.52
2124 2129 6.704493 CGTATAAAGGTGGCTAGCATTCTTTA 59.296 38.462 24.38 24.38 33.23 1.85
2125 2130 7.387948 CGTATAAAGGTGGCTAGCATTCTTTAT 59.612 37.037 29.51 29.51 39.34 1.40
2126 2131 9.720769 GTATAAAGGTGGCTAGCATTCTTTATA 57.279 33.333 28.30 28.30 38.01 0.98
2128 2133 9.813826 ATAAAGGTGGCTAGCATTCTTTATAAT 57.186 29.630 27.76 17.06 36.35 1.28
2129 2134 8.539117 AAAGGTGGCTAGCATTCTTTATAATT 57.461 30.769 18.24 0.00 0.00 1.40
2130 2135 9.640952 AAAGGTGGCTAGCATTCTTTATAATTA 57.359 29.630 18.24 0.00 0.00 1.40
2131 2136 9.813826 AAGGTGGCTAGCATTCTTTATAATTAT 57.186 29.630 18.24 2.97 0.00 1.28
2166 2171 7.959689 ATCTTATGGTCAATCGATGAAGAAG 57.040 36.000 0.00 0.00 40.50 2.85
2167 2172 6.878317 TCTTATGGTCAATCGATGAAGAAGT 58.122 36.000 0.00 0.00 40.50 3.01
2168 2173 6.980978 TCTTATGGTCAATCGATGAAGAAGTC 59.019 38.462 0.00 0.00 40.50 3.01
2169 2174 4.535526 TGGTCAATCGATGAAGAAGTCA 57.464 40.909 0.00 0.00 40.50 3.41
2170 2175 4.498241 TGGTCAATCGATGAAGAAGTCAG 58.502 43.478 0.00 0.00 40.43 3.51
2171 2176 4.220602 TGGTCAATCGATGAAGAAGTCAGA 59.779 41.667 0.00 0.00 40.43 3.27
2172 2177 4.803088 GGTCAATCGATGAAGAAGTCAGAG 59.197 45.833 0.00 0.00 40.43 3.35
2173 2178 5.393569 GGTCAATCGATGAAGAAGTCAGAGA 60.394 44.000 0.00 0.00 40.43 3.10
2174 2179 6.272318 GTCAATCGATGAAGAAGTCAGAGAT 58.728 40.000 0.00 0.00 40.43 2.75
2175 2180 6.756074 GTCAATCGATGAAGAAGTCAGAGATT 59.244 38.462 0.00 0.00 42.36 2.40
2176 2181 7.277539 GTCAATCGATGAAGAAGTCAGAGATTT 59.722 37.037 0.00 0.00 40.97 2.17
2177 2182 7.821359 TCAATCGATGAAGAAGTCAGAGATTTT 59.179 33.333 0.00 0.00 40.97 1.82
2178 2183 6.957984 TCGATGAAGAAGTCAGAGATTTTG 57.042 37.500 0.00 0.00 40.43 2.44
2179 2184 6.459066 TCGATGAAGAAGTCAGAGATTTTGT 58.541 36.000 0.00 0.00 40.43 2.83
2180 2185 6.587990 TCGATGAAGAAGTCAGAGATTTTGTC 59.412 38.462 0.00 0.00 40.43 3.18
2181 2186 6.183360 CGATGAAGAAGTCAGAGATTTTGTCC 60.183 42.308 0.00 0.00 40.43 4.02
2182 2187 6.179906 TGAAGAAGTCAGAGATTTTGTCCT 57.820 37.500 0.00 0.00 0.00 3.85
2183 2188 6.226787 TGAAGAAGTCAGAGATTTTGTCCTC 58.773 40.000 0.00 0.00 0.00 3.71
2184 2189 6.042552 TGAAGAAGTCAGAGATTTTGTCCTCT 59.957 38.462 0.00 0.00 40.14 3.69
2185 2190 6.432403 AGAAGTCAGAGATTTTGTCCTCTT 57.568 37.500 0.00 0.00 37.64 2.85
2186 2191 6.836242 AGAAGTCAGAGATTTTGTCCTCTTT 58.164 36.000 0.00 0.00 37.64 2.52
2187 2192 6.709846 AGAAGTCAGAGATTTTGTCCTCTTTG 59.290 38.462 0.00 0.00 37.64 2.77
2188 2193 5.934781 AGTCAGAGATTTTGTCCTCTTTGT 58.065 37.500 0.00 0.00 37.64 2.83
2189 2194 5.994668 AGTCAGAGATTTTGTCCTCTTTGTC 59.005 40.000 0.00 0.00 37.64 3.18
2190 2195 5.760253 GTCAGAGATTTTGTCCTCTTTGTCA 59.240 40.000 0.00 0.00 37.64 3.58
2191 2196 5.994054 TCAGAGATTTTGTCCTCTTTGTCAG 59.006 40.000 0.00 0.00 37.64 3.51
2192 2197 5.994054 CAGAGATTTTGTCCTCTTTGTCAGA 59.006 40.000 0.00 0.00 37.64 3.27
2212 2217 8.956426 TGTCAGAGTTATTTATCCAAAATCACC 58.044 33.333 0.00 0.00 0.00 4.02
2213 2218 8.956426 GTCAGAGTTATTTATCCAAAATCACCA 58.044 33.333 0.00 0.00 0.00 4.17
2214 2219 8.956426 TCAGAGTTATTTATCCAAAATCACCAC 58.044 33.333 0.00 0.00 0.00 4.16
2215 2220 8.739039 CAGAGTTATTTATCCAAAATCACCACA 58.261 33.333 0.00 0.00 0.00 4.17
2216 2221 8.739972 AGAGTTATTTATCCAAAATCACCACAC 58.260 33.333 0.00 0.00 0.00 3.82
2217 2222 8.650143 AGTTATTTATCCAAAATCACCACACT 57.350 30.769 0.00 0.00 0.00 3.55
2218 2223 9.088987 AGTTATTTATCCAAAATCACCACACTT 57.911 29.630 0.00 0.00 0.00 3.16
2219 2224 9.139174 GTTATTTATCCAAAATCACCACACTTG 57.861 33.333 0.00 0.00 0.00 3.16
2231 2236 2.786777 CCACACTTGGGTTAGGGTAAC 58.213 52.381 0.00 0.00 39.57 2.50
2232 2237 2.106857 CCACACTTGGGTTAGGGTAACA 59.893 50.000 0.00 0.00 39.57 2.41
2233 2238 3.435313 CCACACTTGGGTTAGGGTAACAA 60.435 47.826 0.00 0.00 39.57 2.83
2234 2239 3.566742 CACACTTGGGTTAGGGTAACAAC 59.433 47.826 0.00 0.00 40.39 3.32
2235 2240 3.460712 ACACTTGGGTTAGGGTAACAACT 59.539 43.478 0.00 0.00 40.39 3.16
2236 2241 4.079615 ACACTTGGGTTAGGGTAACAACTT 60.080 41.667 0.00 0.00 40.39 2.66
2237 2242 4.277423 CACTTGGGTTAGGGTAACAACTTG 59.723 45.833 0.00 0.00 40.39 3.16
2238 2243 4.166531 ACTTGGGTTAGGGTAACAACTTGA 59.833 41.667 0.00 0.00 40.39 3.02
2239 2244 5.163023 ACTTGGGTTAGGGTAACAACTTGAT 60.163 40.000 0.00 0.00 40.39 2.57
2240 2245 4.658063 TGGGTTAGGGTAACAACTTGATG 58.342 43.478 0.00 0.00 40.39 3.07
2241 2246 3.442625 GGGTTAGGGTAACAACTTGATGC 59.557 47.826 0.00 0.00 40.39 3.91
2242 2247 3.442625 GGTTAGGGTAACAACTTGATGCC 59.557 47.826 0.00 0.00 40.39 4.40
2243 2248 2.969821 AGGGTAACAACTTGATGCCA 57.030 45.000 8.16 0.00 39.74 4.92
2244 2249 3.456380 AGGGTAACAACTTGATGCCAT 57.544 42.857 8.16 0.00 39.74 4.40
2245 2250 4.584638 AGGGTAACAACTTGATGCCATA 57.415 40.909 8.16 0.00 39.74 2.74
2246 2251 5.129368 AGGGTAACAACTTGATGCCATAT 57.871 39.130 8.16 0.00 39.74 1.78
2247 2252 5.518865 AGGGTAACAACTTGATGCCATATT 58.481 37.500 8.16 0.00 39.74 1.28
2248 2253 5.957774 AGGGTAACAACTTGATGCCATATTT 59.042 36.000 8.16 0.00 39.74 1.40
2249 2254 7.122715 AGGGTAACAACTTGATGCCATATTTA 58.877 34.615 8.16 0.00 39.74 1.40
2250 2255 7.784550 AGGGTAACAACTTGATGCCATATTTAT 59.215 33.333 8.16 0.00 39.74 1.40
2251 2256 7.867403 GGGTAACAACTTGATGCCATATTTATG 59.133 37.037 8.16 0.00 39.74 1.90
2252 2257 8.413229 GGTAACAACTTGATGCCATATTTATGT 58.587 33.333 1.87 0.00 31.82 2.29
2253 2258 9.450807 GTAACAACTTGATGCCATATTTATGTC 57.549 33.333 0.00 0.00 31.82 3.06
2254 2259 7.643569 ACAACTTGATGCCATATTTATGTCA 57.356 32.000 0.00 0.00 31.82 3.58
2255 2260 7.709947 ACAACTTGATGCCATATTTATGTCAG 58.290 34.615 0.00 0.00 31.82 3.51
2256 2261 6.889301 ACTTGATGCCATATTTATGTCAGG 57.111 37.500 0.00 0.00 31.82 3.86
2257 2262 5.771666 ACTTGATGCCATATTTATGTCAGGG 59.228 40.000 0.00 0.00 31.82 4.45
2258 2263 4.081406 TGATGCCATATTTATGTCAGGGC 58.919 43.478 0.00 0.00 31.82 5.19
2259 2264 3.591695 TGCCATATTTATGTCAGGGCA 57.408 42.857 0.00 0.00 31.82 5.36
2260 2265 3.221771 TGCCATATTTATGTCAGGGCAC 58.778 45.455 0.00 0.00 31.82 5.01
2261 2266 3.221771 GCCATATTTATGTCAGGGCACA 58.778 45.455 0.00 0.00 31.82 4.57
2262 2267 3.636300 GCCATATTTATGTCAGGGCACAA 59.364 43.478 0.00 0.00 31.82 3.33
2263 2268 4.099266 GCCATATTTATGTCAGGGCACAAA 59.901 41.667 0.00 0.00 31.82 2.83
2264 2269 5.395103 GCCATATTTATGTCAGGGCACAAAA 60.395 40.000 0.00 0.00 31.82 2.44
2265 2270 6.638610 CCATATTTATGTCAGGGCACAAAAA 58.361 36.000 0.00 0.00 31.82 1.94
2266 2271 6.534793 CCATATTTATGTCAGGGCACAAAAAC 59.465 38.462 0.00 0.00 31.82 2.43
2267 2272 4.329462 TTTATGTCAGGGCACAAAAACC 57.671 40.909 0.00 0.00 0.00 3.27
2272 2277 3.527641 GGGCACAAAAACCCACGA 58.472 55.556 0.00 0.00 46.22 4.35
2273 2278 1.817209 GGGCACAAAAACCCACGAA 59.183 52.632 0.00 0.00 46.22 3.85
2274 2279 0.175989 GGGCACAAAAACCCACGAAA 59.824 50.000 0.00 0.00 46.22 3.46
2275 2280 1.202592 GGGCACAAAAACCCACGAAAT 60.203 47.619 0.00 0.00 46.22 2.17
2276 2281 2.556257 GGCACAAAAACCCACGAAATT 58.444 42.857 0.00 0.00 0.00 1.82
2277 2282 2.286563 GGCACAAAAACCCACGAAATTG 59.713 45.455 0.00 0.00 0.00 2.32
2278 2283 2.286125 GCACAAAAACCCACGAAATTGC 60.286 45.455 0.00 0.00 0.00 3.56
2279 2284 2.034170 CACAAAAACCCACGAAATTGCG 60.034 45.455 3.68 3.68 37.29 4.85
2280 2285 1.070909 CAAAAACCCACGAAATTGCGC 60.071 47.619 5.51 0.00 33.86 6.09
2281 2286 0.598942 AAAACCCACGAAATTGCGCC 60.599 50.000 5.51 0.00 33.86 6.53
2282 2287 1.460273 AAACCCACGAAATTGCGCCT 61.460 50.000 5.51 0.00 33.86 5.52
2283 2288 0.606944 AACCCACGAAATTGCGCCTA 60.607 50.000 5.51 0.00 33.86 3.93
2284 2289 0.606944 ACCCACGAAATTGCGCCTAA 60.607 50.000 5.51 0.00 33.86 2.69
2285 2290 0.738389 CCCACGAAATTGCGCCTAAT 59.262 50.000 5.51 0.00 33.86 1.73
2286 2291 1.268539 CCCACGAAATTGCGCCTAATC 60.269 52.381 5.51 0.00 33.86 1.75
2287 2292 1.670811 CCACGAAATTGCGCCTAATCT 59.329 47.619 5.51 0.00 33.86 2.40
2288 2293 2.869801 CCACGAAATTGCGCCTAATCTA 59.130 45.455 5.51 0.00 33.86 1.98
2289 2294 3.498397 CCACGAAATTGCGCCTAATCTAT 59.502 43.478 5.51 0.00 33.86 1.98
2290 2295 4.688879 CCACGAAATTGCGCCTAATCTATA 59.311 41.667 5.51 0.00 33.86 1.31
2291 2296 5.178623 CCACGAAATTGCGCCTAATCTATAA 59.821 40.000 5.51 0.00 33.86 0.98
2292 2297 6.071463 CACGAAATTGCGCCTAATCTATAAC 58.929 40.000 5.51 0.00 33.86 1.89
2293 2298 5.107607 ACGAAATTGCGCCTAATCTATAACG 60.108 40.000 5.51 2.88 33.86 3.18
2294 2299 4.663636 AATTGCGCCTAATCTATAACGC 57.336 40.909 4.18 0.00 46.05 4.84
2298 2303 4.053903 GCGCCTAATCTATAACGCAAAG 57.946 45.455 0.00 0.00 45.25 2.77
2299 2304 3.664537 GCGCCTAATCTATAACGCAAAGC 60.665 47.826 0.00 0.00 45.25 3.51
2300 2305 3.493129 CGCCTAATCTATAACGCAAAGCA 59.507 43.478 0.00 0.00 0.00 3.91
2301 2306 4.608445 CGCCTAATCTATAACGCAAAGCAC 60.608 45.833 0.00 0.00 0.00 4.40
2302 2307 4.511826 GCCTAATCTATAACGCAAAGCACT 59.488 41.667 0.00 0.00 0.00 4.40
2303 2308 5.559035 GCCTAATCTATAACGCAAAGCACTG 60.559 44.000 0.00 0.00 0.00 3.66
2304 2309 4.882671 AATCTATAACGCAAAGCACTGG 57.117 40.909 0.00 0.00 0.00 4.00
2305 2310 3.328382 TCTATAACGCAAAGCACTGGT 57.672 42.857 0.00 0.00 0.00 4.00
2306 2311 4.459390 TCTATAACGCAAAGCACTGGTA 57.541 40.909 0.00 0.00 0.00 3.25
2307 2312 4.178540 TCTATAACGCAAAGCACTGGTAC 58.821 43.478 0.00 0.00 0.00 3.34
2308 2313 2.536761 TAACGCAAAGCACTGGTACT 57.463 45.000 0.00 0.00 0.00 2.73
2309 2314 1.226746 AACGCAAAGCACTGGTACTC 58.773 50.000 0.00 0.00 0.00 2.59
2310 2315 0.105964 ACGCAAAGCACTGGTACTCA 59.894 50.000 0.00 0.00 0.00 3.41
2312 2317 1.605457 CGCAAAGCACTGGTACTCAGA 60.605 52.381 15.59 0.00 46.18 3.27
2313 2318 2.704572 GCAAAGCACTGGTACTCAGAT 58.295 47.619 15.59 2.16 46.18 2.90
2314 2319 3.077359 GCAAAGCACTGGTACTCAGATT 58.923 45.455 15.59 6.79 46.18 2.40
2315 2320 3.503748 GCAAAGCACTGGTACTCAGATTT 59.496 43.478 15.59 10.85 46.18 2.17
2316 2321 4.614535 GCAAAGCACTGGTACTCAGATTTG 60.615 45.833 15.59 18.66 46.18 2.32
2317 2322 3.340814 AGCACTGGTACTCAGATTTGG 57.659 47.619 15.59 4.10 46.18 3.28
2318 2323 2.639839 AGCACTGGTACTCAGATTTGGT 59.360 45.455 15.59 8.19 46.18 3.67
2319 2324 3.073062 AGCACTGGTACTCAGATTTGGTT 59.927 43.478 15.59 0.00 46.18 3.67
2320 2325 3.189287 GCACTGGTACTCAGATTTGGTTG 59.811 47.826 15.59 5.41 46.18 3.77
2321 2326 4.641396 CACTGGTACTCAGATTTGGTTGA 58.359 43.478 15.59 0.00 46.18 3.18
2322 2327 4.692625 CACTGGTACTCAGATTTGGTTGAG 59.307 45.833 15.59 0.27 46.18 3.02
2323 2328 4.593206 ACTGGTACTCAGATTTGGTTGAGA 59.407 41.667 15.59 0.00 46.18 3.27
2324 2329 5.071788 ACTGGTACTCAGATTTGGTTGAGAA 59.928 40.000 15.59 0.00 46.18 2.87
2325 2330 5.935945 TGGTACTCAGATTTGGTTGAGAAA 58.064 37.500 8.35 0.00 42.67 2.52
2326 2331 6.361433 TGGTACTCAGATTTGGTTGAGAAAA 58.639 36.000 8.35 0.00 42.67 2.29
2327 2332 6.262273 TGGTACTCAGATTTGGTTGAGAAAAC 59.738 38.462 8.35 4.01 42.67 2.43
2328 2333 6.262273 GGTACTCAGATTTGGTTGAGAAAACA 59.738 38.462 8.35 0.00 42.67 2.83
2329 2334 6.382869 ACTCAGATTTGGTTGAGAAAACAG 57.617 37.500 8.35 0.00 42.67 3.16
2330 2335 5.186996 TCAGATTTGGTTGAGAAAACAGC 57.813 39.130 0.00 0.00 0.00 4.40
2331 2336 4.644234 TCAGATTTGGTTGAGAAAACAGCA 59.356 37.500 0.00 0.00 0.00 4.41
2332 2337 5.126869 TCAGATTTGGTTGAGAAAACAGCAA 59.873 36.000 0.00 0.00 0.00 3.91
2333 2338 5.811613 CAGATTTGGTTGAGAAAACAGCAAA 59.188 36.000 0.00 0.00 40.94 3.68
2334 2339 6.313411 CAGATTTGGTTGAGAAAACAGCAAAA 59.687 34.615 0.00 0.00 40.29 2.44
2335 2340 5.854431 TTTGGTTGAGAAAACAGCAAAAC 57.146 34.783 0.00 0.00 35.53 2.43
2336 2341 4.799564 TGGTTGAGAAAACAGCAAAACT 57.200 36.364 0.00 0.00 0.00 2.66
2348 2353 1.547372 AGCAAAACTGACATGATGGGC 59.453 47.619 0.00 0.00 0.00 5.36
2349 2354 1.404583 GCAAAACTGACATGATGGGCC 60.405 52.381 0.00 0.00 0.00 5.80
2350 2355 1.205417 CAAAACTGACATGATGGGCCC 59.795 52.381 17.59 17.59 0.00 5.80
2351 2356 0.680921 AAACTGACATGATGGGCCCG 60.681 55.000 19.37 4.36 0.00 6.13
2352 2357 2.903855 CTGACATGATGGGCCCGC 60.904 66.667 19.37 12.85 0.00 6.13
2353 2358 4.504596 TGACATGATGGGCCCGCC 62.505 66.667 19.37 12.11 0.00 6.13
2354 2359 4.195334 GACATGATGGGCCCGCCT 62.195 66.667 19.37 3.68 36.10 5.52
2355 2360 4.511246 ACATGATGGGCCCGCCTG 62.511 66.667 19.37 16.82 36.10 4.85
2356 2361 4.511246 CATGATGGGCCCGCCTGT 62.511 66.667 19.37 0.00 36.10 4.00
2357 2362 4.195334 ATGATGGGCCCGCCTGTC 62.195 66.667 19.37 10.46 36.10 3.51
2359 2364 4.864334 GATGGGCCCGCCTGTCAG 62.864 72.222 19.37 0.00 36.10 3.51
2370 2375 3.149899 CCTGTCAGGCTGATGTGTC 57.850 57.895 21.84 7.82 0.00 3.67
2371 2376 0.738762 CCTGTCAGGCTGATGTGTCG 60.739 60.000 21.84 5.69 0.00 4.35
2372 2377 0.244721 CTGTCAGGCTGATGTGTCGA 59.755 55.000 21.84 0.00 0.00 4.20
2373 2378 0.678950 TGTCAGGCTGATGTGTCGAA 59.321 50.000 21.84 0.00 0.00 3.71
2374 2379 1.337167 TGTCAGGCTGATGTGTCGAAG 60.337 52.381 21.84 0.00 0.00 3.79
2375 2380 1.067565 GTCAGGCTGATGTGTCGAAGA 60.068 52.381 21.84 0.00 0.00 2.87
2390 2395 4.625972 TCGAAGACCAAAAACTTTGACC 57.374 40.909 0.69 0.00 33.34 4.02
2391 2396 4.011023 TCGAAGACCAAAAACTTTGACCA 58.989 39.130 0.69 0.00 33.34 4.02
2392 2397 4.459685 TCGAAGACCAAAAACTTTGACCAA 59.540 37.500 0.69 0.00 33.34 3.67
2393 2398 4.561213 CGAAGACCAAAAACTTTGACCAAC 59.439 41.667 0.69 0.00 31.37 3.77
2394 2399 5.621329 CGAAGACCAAAAACTTTGACCAACT 60.621 40.000 0.69 0.00 31.37 3.16
2395 2400 5.072040 AGACCAAAAACTTTGACCAACTG 57.928 39.130 0.69 0.00 0.00 3.16
2396 2401 4.770010 AGACCAAAAACTTTGACCAACTGA 59.230 37.500 0.69 0.00 0.00 3.41
2397 2402 5.422012 AGACCAAAAACTTTGACCAACTGAT 59.578 36.000 0.69 0.00 0.00 2.90
2398 2403 5.418676 ACCAAAAACTTTGACCAACTGATG 58.581 37.500 0.69 0.00 0.00 3.07
2399 2404 5.046663 ACCAAAAACTTTGACCAACTGATGT 60.047 36.000 0.69 0.00 0.00 3.06
2400 2405 5.291614 CCAAAAACTTTGACCAACTGATGTG 59.708 40.000 0.69 0.00 0.00 3.21
2401 2406 4.654091 AAACTTTGACCAACTGATGTGG 57.346 40.909 0.00 0.00 0.00 4.17
2402 2407 1.956477 ACTTTGACCAACTGATGTGGC 59.044 47.619 0.00 0.00 0.00 5.01
2403 2408 1.955778 CTTTGACCAACTGATGTGGCA 59.044 47.619 0.00 0.00 0.00 4.92
2404 2409 2.064434 TTGACCAACTGATGTGGCAA 57.936 45.000 0.00 0.00 0.00 4.52
2405 2410 2.064434 TGACCAACTGATGTGGCAAA 57.936 45.000 0.00 0.00 0.00 3.68
2406 2411 2.596346 TGACCAACTGATGTGGCAAAT 58.404 42.857 0.00 0.00 0.00 2.32
2407 2412 2.296752 TGACCAACTGATGTGGCAAATG 59.703 45.455 0.00 0.00 0.00 2.32
2408 2413 2.557924 GACCAACTGATGTGGCAAATGA 59.442 45.455 0.00 0.00 0.00 2.57
2409 2414 2.559668 ACCAACTGATGTGGCAAATGAG 59.440 45.455 2.26 2.26 0.00 2.90
2410 2415 2.559668 CCAACTGATGTGGCAAATGAGT 59.440 45.455 3.71 3.71 0.00 3.41
2411 2416 3.366679 CCAACTGATGTGGCAAATGAGTC 60.367 47.826 10.32 0.00 0.00 3.36
2412 2417 2.079158 ACTGATGTGGCAAATGAGTCG 58.921 47.619 3.71 0.00 0.00 4.18
2413 2418 2.079158 CTGATGTGGCAAATGAGTCGT 58.921 47.619 0.00 0.00 0.00 4.34
2414 2419 1.805943 TGATGTGGCAAATGAGTCGTG 59.194 47.619 0.00 0.00 0.00 4.35
2415 2420 1.806542 GATGTGGCAAATGAGTCGTGT 59.193 47.619 0.00 0.00 0.00 4.49
2416 2421 0.943673 TGTGGCAAATGAGTCGTGTG 59.056 50.000 0.00 0.00 0.00 3.82
2417 2422 0.385974 GTGGCAAATGAGTCGTGTGC 60.386 55.000 17.89 17.89 34.42 4.57
2418 2423 4.847255 GCAAATGAGTCGTGTGCC 57.153 55.556 15.65 0.00 0.00 5.01
2419 2424 1.210155 GCAAATGAGTCGTGTGCCC 59.790 57.895 15.65 0.00 0.00 5.36
2420 2425 1.875963 CAAATGAGTCGTGTGCCCC 59.124 57.895 0.00 0.00 0.00 5.80
2421 2426 0.888736 CAAATGAGTCGTGTGCCCCA 60.889 55.000 0.00 0.00 0.00 4.96
2422 2427 0.889186 AAATGAGTCGTGTGCCCCAC 60.889 55.000 0.00 0.00 40.89 4.61
2423 2428 2.748058 AATGAGTCGTGTGCCCCACC 62.748 60.000 0.00 0.00 41.26 4.61
2424 2429 3.626924 GAGTCGTGTGCCCCACCT 61.627 66.667 0.00 0.00 41.26 4.00
2425 2430 3.883744 GAGTCGTGTGCCCCACCTG 62.884 68.421 0.00 0.00 41.26 4.00
2426 2431 4.250305 GTCGTGTGCCCCACCTGT 62.250 66.667 0.00 0.00 41.26 4.00
2427 2432 3.936203 TCGTGTGCCCCACCTGTC 61.936 66.667 0.00 0.00 41.26 3.51
2428 2433 4.248842 CGTGTGCCCCACCTGTCA 62.249 66.667 0.00 0.00 41.26 3.58
2429 2434 2.194597 GTGTGCCCCACCTGTCAA 59.805 61.111 0.00 0.00 38.18 3.18
2430 2435 1.228552 GTGTGCCCCACCTGTCAAT 60.229 57.895 0.00 0.00 38.18 2.57
2431 2436 1.228521 TGTGCCCCACCTGTCAATG 60.229 57.895 0.00 0.00 32.73 2.82
2432 2437 1.074775 GTGCCCCACCTGTCAATGA 59.925 57.895 0.00 0.00 0.00 2.57
2433 2438 1.074775 TGCCCCACCTGTCAATGAC 59.925 57.895 6.41 6.41 0.00 3.06
2434 2439 1.380302 GCCCCACCTGTCAATGACT 59.620 57.895 14.97 0.00 33.15 3.41
2435 2440 0.618458 GCCCCACCTGTCAATGACTA 59.382 55.000 14.97 0.48 33.15 2.59
2436 2441 1.679032 GCCCCACCTGTCAATGACTAC 60.679 57.143 14.97 0.00 33.15 2.73
2437 2442 1.628340 CCCCACCTGTCAATGACTACA 59.372 52.381 14.97 0.00 33.15 2.74
2438 2443 2.615493 CCCCACCTGTCAATGACTACAC 60.615 54.545 14.97 0.00 33.15 2.90
2439 2444 2.303022 CCCACCTGTCAATGACTACACT 59.697 50.000 14.97 0.00 33.15 3.55
2440 2445 3.329386 CCACCTGTCAATGACTACACTG 58.671 50.000 14.97 3.15 33.15 3.66
2441 2446 3.244215 CCACCTGTCAATGACTACACTGT 60.244 47.826 14.97 0.40 33.15 3.55
2442 2447 3.990469 CACCTGTCAATGACTACACTGTC 59.010 47.826 14.97 0.00 37.47 3.51
2452 2457 5.048153 TGACTACACTGTCATCTTCTTCG 57.952 43.478 0.00 0.00 41.43 3.79
2453 2458 3.839293 ACTACACTGTCATCTTCTTCGC 58.161 45.455 0.00 0.00 0.00 4.70
2454 2459 2.820059 ACACTGTCATCTTCTTCGCA 57.180 45.000 0.00 0.00 0.00 5.10
2455 2460 3.325293 ACACTGTCATCTTCTTCGCAT 57.675 42.857 0.00 0.00 0.00 4.73
2456 2461 3.257393 ACACTGTCATCTTCTTCGCATC 58.743 45.455 0.00 0.00 0.00 3.91
2457 2462 3.056250 ACACTGTCATCTTCTTCGCATCT 60.056 43.478 0.00 0.00 0.00 2.90
2458 2463 3.551082 CACTGTCATCTTCTTCGCATCTC 59.449 47.826 0.00 0.00 0.00 2.75
2459 2464 3.446873 ACTGTCATCTTCTTCGCATCTCT 59.553 43.478 0.00 0.00 0.00 3.10
2460 2465 3.778618 TGTCATCTTCTTCGCATCTCTG 58.221 45.455 0.00 0.00 0.00 3.35
2461 2466 2.539274 GTCATCTTCTTCGCATCTCTGC 59.461 50.000 0.00 0.00 45.31 4.26
2462 2467 2.429971 TCATCTTCTTCGCATCTCTGCT 59.570 45.455 0.00 0.00 46.65 4.24
2463 2468 3.633986 TCATCTTCTTCGCATCTCTGCTA 59.366 43.478 0.00 0.00 46.65 3.49
2464 2469 3.706802 TCTTCTTCGCATCTCTGCTAG 57.293 47.619 0.00 0.00 46.65 3.42
2465 2470 2.360483 TCTTCTTCGCATCTCTGCTAGG 59.640 50.000 0.00 0.00 46.65 3.02
2466 2471 1.035923 TCTTCGCATCTCTGCTAGGG 58.964 55.000 0.00 0.00 46.65 3.53
2467 2472 0.033228 CTTCGCATCTCTGCTAGGGG 59.967 60.000 0.00 0.00 46.65 4.79
2468 2473 1.402896 TTCGCATCTCTGCTAGGGGG 61.403 60.000 0.00 0.00 46.65 5.40
2469 2474 2.429494 GCATCTCTGCTAGGGGGC 59.571 66.667 0.00 0.00 45.32 5.80
2470 2475 2.446848 GCATCTCTGCTAGGGGGCA 61.447 63.158 0.00 0.00 45.32 5.36
2471 2476 1.776975 GCATCTCTGCTAGGGGGCAT 61.777 60.000 0.00 0.00 45.32 4.40
2472 2477 0.769873 CATCTCTGCTAGGGGGCATT 59.230 55.000 0.00 0.00 41.63 3.56
2473 2478 1.063183 ATCTCTGCTAGGGGGCATTC 58.937 55.000 0.00 0.00 41.63 2.67
2474 2479 1.056700 TCTCTGCTAGGGGGCATTCC 61.057 60.000 0.00 0.00 41.63 3.01
2475 2480 1.307778 TCTGCTAGGGGGCATTCCA 60.308 57.895 0.00 0.00 41.63 3.53
2476 2481 0.698886 TCTGCTAGGGGGCATTCCAT 60.699 55.000 0.00 0.00 41.63 3.41
2477 2482 0.251077 CTGCTAGGGGGCATTCCATC 60.251 60.000 0.00 0.00 41.63 3.51
2478 2483 1.302832 GCTAGGGGGCATTCCATCG 60.303 63.158 0.00 0.00 37.22 3.84
2479 2484 1.768684 GCTAGGGGGCATTCCATCGA 61.769 60.000 0.00 0.00 37.22 3.59
2480 2485 0.322975 CTAGGGGGCATTCCATCGAG 59.677 60.000 0.00 0.00 37.22 4.04
2481 2486 1.768684 TAGGGGGCATTCCATCGAGC 61.769 60.000 0.00 0.00 37.22 5.03
2482 2487 2.192979 GGGGCATTCCATCGAGCA 59.807 61.111 0.00 0.00 37.22 4.26
2483 2488 1.895707 GGGGCATTCCATCGAGCAG 60.896 63.158 0.00 0.00 37.22 4.24
2484 2489 1.895707 GGGCATTCCATCGAGCAGG 60.896 63.158 0.00 0.00 35.00 4.85
2485 2490 1.153086 GGCATTCCATCGAGCAGGT 60.153 57.895 0.00 0.00 0.00 4.00
2486 2491 0.749454 GGCATTCCATCGAGCAGGTT 60.749 55.000 0.00 0.00 0.00 3.50
2487 2492 0.659957 GCATTCCATCGAGCAGGTTC 59.340 55.000 0.00 0.00 0.00 3.62
2488 2493 1.745141 GCATTCCATCGAGCAGGTTCT 60.745 52.381 0.00 0.00 0.00 3.01
2489 2494 2.483714 GCATTCCATCGAGCAGGTTCTA 60.484 50.000 0.00 0.00 0.00 2.10
2490 2495 3.388308 CATTCCATCGAGCAGGTTCTAG 58.612 50.000 0.00 0.00 0.00 2.43
2491 2496 1.403814 TCCATCGAGCAGGTTCTAGG 58.596 55.000 0.00 0.00 0.00 3.02
2492 2497 0.249657 CCATCGAGCAGGTTCTAGGC 60.250 60.000 0.00 0.00 0.00 3.93
2493 2498 0.596083 CATCGAGCAGGTTCTAGGCG 60.596 60.000 0.00 0.00 0.00 5.52
2494 2499 1.739338 ATCGAGCAGGTTCTAGGCGG 61.739 60.000 0.00 0.00 0.00 6.13
2495 2500 2.202946 GAGCAGGTTCTAGGCGGC 60.203 66.667 0.00 0.00 0.00 6.53
2496 2501 3.741830 GAGCAGGTTCTAGGCGGCC 62.742 68.421 12.11 12.11 0.00 6.13
2498 2503 4.530857 CAGGTTCTAGGCGGCCGG 62.531 72.222 29.38 10.44 0.00 6.13
2499 2504 4.772231 AGGTTCTAGGCGGCCGGA 62.772 66.667 29.38 13.05 0.00 5.14
2500 2505 3.547513 GGTTCTAGGCGGCCGGAT 61.548 66.667 29.38 0.00 0.00 4.18
2501 2506 2.504519 GTTCTAGGCGGCCGGATT 59.495 61.111 29.38 0.00 0.00 3.01
2502 2507 1.744014 GTTCTAGGCGGCCGGATTA 59.256 57.895 29.38 0.00 0.00 1.75
2503 2508 0.599466 GTTCTAGGCGGCCGGATTAC 60.599 60.000 29.38 9.53 0.00 1.89
2504 2509 2.049433 CTAGGCGGCCGGATTACG 60.049 66.667 29.38 4.55 43.80 3.18
2505 2510 2.834505 TAGGCGGCCGGATTACGT 60.835 61.111 29.38 13.63 42.24 3.57
2506 2511 2.744307 CTAGGCGGCCGGATTACGTC 62.744 65.000 29.38 6.97 42.24 4.34
2507 2512 4.217159 GGCGGCCGGATTACGTCT 62.217 66.667 29.38 0.00 42.24 4.18
2508 2513 2.960129 GCGGCCGGATTACGTCTG 60.960 66.667 29.38 0.00 42.24 3.51
2509 2514 2.960129 CGGCCGGATTACGTCTGC 60.960 66.667 20.10 0.00 42.24 4.26
2510 2515 2.960129 GGCCGGATTACGTCTGCG 60.960 66.667 5.05 0.00 42.24 5.18
2511 2516 2.960129 GCCGGATTACGTCTGCGG 60.960 66.667 21.58 21.58 43.45 5.69
2512 2517 2.960129 CCGGATTACGTCTGCGGC 60.960 66.667 16.00 0.00 43.45 6.53
2513 2518 3.320078 CGGATTACGTCTGCGGCG 61.320 66.667 0.51 0.51 43.45 6.46
2514 2519 2.202703 GGATTACGTCTGCGGCGT 60.203 61.111 16.93 16.93 45.11 5.68
2515 2520 1.808390 GGATTACGTCTGCGGCGTT 60.808 57.895 17.74 3.86 42.85 4.84
2516 2521 1.343821 GATTACGTCTGCGGCGTTG 59.656 57.895 17.74 1.34 42.85 4.10
2517 2522 1.349259 GATTACGTCTGCGGCGTTGT 61.349 55.000 17.74 8.92 42.85 3.32
2518 2523 1.623081 ATTACGTCTGCGGCGTTGTG 61.623 55.000 17.74 0.00 42.85 3.33
2528 2533 3.357079 GCGTTGTGCCTCTGGTGG 61.357 66.667 0.00 0.00 37.76 4.61
2529 2534 2.425592 CGTTGTGCCTCTGGTGGA 59.574 61.111 0.00 0.00 0.00 4.02
2530 2535 1.669115 CGTTGTGCCTCTGGTGGAG 60.669 63.158 0.00 0.00 41.51 3.86
2537 2542 4.463879 CTCTGGTGGAGGCCGCTG 62.464 72.222 6.40 0.00 38.35 5.18
2542 2547 4.767255 GTGGAGGCCGCTGTGGAG 62.767 72.222 12.29 0.00 42.00 3.86
2544 2549 4.154347 GGAGGCCGCTGTGGAGAG 62.154 72.222 12.29 0.00 42.00 3.20
2545 2550 4.154347 GAGGCCGCTGTGGAGAGG 62.154 72.222 12.29 0.00 41.97 3.69
2546 2551 4.704103 AGGCCGCTGTGGAGAGGA 62.704 66.667 12.29 0.00 41.61 3.71
2547 2552 4.154347 GGCCGCTGTGGAGAGGAG 62.154 72.222 12.29 0.00 41.61 3.69
2548 2553 4.154347 GCCGCTGTGGAGAGGAGG 62.154 72.222 12.29 0.00 41.61 4.30
2549 2554 4.154347 CCGCTGTGGAGAGGAGGC 62.154 72.222 0.00 0.00 41.61 4.70
2550 2555 4.504916 CGCTGTGGAGAGGAGGCG 62.505 72.222 0.00 0.00 36.89 5.52
2551 2556 4.828925 GCTGTGGAGAGGAGGCGC 62.829 72.222 0.00 0.00 0.00 6.53
2552 2557 3.073735 CTGTGGAGAGGAGGCGCT 61.074 66.667 7.64 0.00 0.00 5.92
2553 2558 3.071206 TGTGGAGAGGAGGCGCTC 61.071 66.667 7.64 2.45 0.00 5.03
2554 2559 4.200283 GTGGAGAGGAGGCGCTCG 62.200 72.222 7.64 0.00 31.95 5.03
2557 2562 3.591835 GAGAGGAGGCGCTCGGAG 61.592 72.222 7.64 0.00 0.00 4.63
2623 2628 4.529219 CCGCCATGCCTAGCACGA 62.529 66.667 0.00 0.00 43.04 4.35
2624 2629 2.963854 CGCCATGCCTAGCACGAG 60.964 66.667 0.00 0.00 43.04 4.18
2625 2630 2.590007 GCCATGCCTAGCACGAGG 60.590 66.667 0.00 0.00 43.04 4.63
2626 2631 3.094062 GCCATGCCTAGCACGAGGA 62.094 63.158 0.44 0.00 43.04 3.71
2627 2632 1.068753 CCATGCCTAGCACGAGGAG 59.931 63.158 0.44 0.00 43.04 3.69
2628 2633 1.593750 CATGCCTAGCACGAGGAGC 60.594 63.158 0.44 0.00 43.04 4.70
2629 2634 2.801631 ATGCCTAGCACGAGGAGCC 61.802 63.158 0.44 0.00 43.04 4.70
2630 2635 4.577246 GCCTAGCACGAGGAGCCG 62.577 72.222 0.44 0.00 39.15 5.52
2631 2636 4.577246 CCTAGCACGAGGAGCCGC 62.577 72.222 0.00 0.00 39.15 6.53
2632 2637 4.914420 CTAGCACGAGGAGCCGCG 62.914 72.222 11.09 11.09 44.41 6.46
2679 2684 2.659897 GCCATGACTAGCGCGAGG 60.660 66.667 21.83 8.99 0.00 4.63
2680 2685 3.120105 CCATGACTAGCGCGAGGA 58.880 61.111 21.83 8.17 0.00 3.71
2681 2686 1.007964 CCATGACTAGCGCGAGGAG 60.008 63.158 21.83 10.89 0.00 3.69
2682 2687 1.659954 CATGACTAGCGCGAGGAGC 60.660 63.158 21.83 10.84 43.95 4.70
2683 2688 2.851071 ATGACTAGCGCGAGGAGCC 61.851 63.158 21.83 8.25 44.76 4.70
2684 2689 4.615834 GACTAGCGCGAGGAGCCG 62.616 72.222 21.83 0.00 44.76 5.52
2693 2698 4.074526 GAGGAGCCGCAGAGCACA 62.075 66.667 0.00 0.00 34.23 4.57
2694 2699 3.596066 GAGGAGCCGCAGAGCACAA 62.596 63.158 0.00 0.00 34.23 3.33
2695 2700 2.669569 GGAGCCGCAGAGCACAAA 60.670 61.111 0.00 0.00 34.23 2.83
2696 2701 2.558313 GAGCCGCAGAGCACAAAC 59.442 61.111 0.00 0.00 34.23 2.93
2697 2702 2.970974 GAGCCGCAGAGCACAAACC 61.971 63.158 0.00 0.00 34.23 3.27
2698 2703 3.286751 GCCGCAGAGCACAAACCA 61.287 61.111 0.00 0.00 0.00 3.67
2699 2704 2.639286 CCGCAGAGCACAAACCAC 59.361 61.111 0.00 0.00 0.00 4.16
2700 2705 2.186160 CCGCAGAGCACAAACCACA 61.186 57.895 0.00 0.00 0.00 4.17
2701 2706 1.009675 CGCAGAGCACAAACCACAC 60.010 57.895 0.00 0.00 0.00 3.82
2702 2707 1.713937 CGCAGAGCACAAACCACACA 61.714 55.000 0.00 0.00 0.00 3.72
2703 2708 0.029834 GCAGAGCACAAACCACACAG 59.970 55.000 0.00 0.00 0.00 3.66
2704 2709 0.029834 CAGAGCACAAACCACACAGC 59.970 55.000 0.00 0.00 0.00 4.40
2705 2710 1.009675 GAGCACAAACCACACAGCG 60.010 57.895 0.00 0.00 0.00 5.18
2706 2711 1.436195 GAGCACAAACCACACAGCGA 61.436 55.000 0.00 0.00 0.00 4.93
2707 2712 1.009675 GCACAAACCACACAGCGAG 60.010 57.895 0.00 0.00 0.00 5.03
2708 2713 1.009675 CACAAACCACACAGCGAGC 60.010 57.895 0.00 0.00 0.00 5.03
2709 2714 2.186826 ACAAACCACACAGCGAGCC 61.187 57.895 0.00 0.00 0.00 4.70
2710 2715 2.186160 CAAACCACACAGCGAGCCA 61.186 57.895 0.00 0.00 0.00 4.75
2711 2716 1.893808 AAACCACACAGCGAGCCAG 60.894 57.895 0.00 0.00 0.00 4.85
2712 2717 4.996434 ACCACACAGCGAGCCAGC 62.996 66.667 0.00 0.00 37.41 4.85
2749 2754 4.427661 AGCCGCAGAGCTCGTGTC 62.428 66.667 8.37 0.00 39.48 3.67
2750 2755 4.724602 GCCGCAGAGCTCGTGTCA 62.725 66.667 8.37 0.00 0.00 3.58
2751 2756 2.807045 CCGCAGAGCTCGTGTCAC 60.807 66.667 8.37 0.00 0.00 3.67
2752 2757 2.050077 CGCAGAGCTCGTGTCACA 60.050 61.111 8.37 0.00 0.00 3.58
2753 2758 2.368105 CGCAGAGCTCGTGTCACAC 61.368 63.158 8.37 0.00 0.00 3.82
2754 2759 1.300156 GCAGAGCTCGTGTCACACA 60.300 57.895 9.06 0.00 33.40 3.72
2755 2760 1.280886 GCAGAGCTCGTGTCACACAG 61.281 60.000 9.06 5.92 33.40 3.66
2756 2761 1.006805 AGAGCTCGTGTCACACAGC 60.007 57.895 19.06 19.06 38.12 4.40
2757 2762 2.355126 AGCTCGTGTCACACAGCG 60.355 61.111 19.96 3.76 40.55 5.18
2758 2763 4.064491 GCTCGTGTCACACAGCGC 62.064 66.667 9.06 0.00 33.40 5.92
2759 2764 2.658268 CTCGTGTCACACAGCGCA 60.658 61.111 11.47 0.00 33.40 6.09
2760 2765 2.023771 CTCGTGTCACACAGCGCAT 61.024 57.895 11.47 0.00 33.40 4.73
2761 2766 1.949015 CTCGTGTCACACAGCGCATC 61.949 60.000 11.47 0.00 33.40 3.91
2762 2767 2.863153 GTGTCACACAGCGCATCC 59.137 61.111 11.47 0.00 34.08 3.51
2763 2768 1.960763 GTGTCACACAGCGCATCCA 60.961 57.895 11.47 0.00 34.08 3.41
2764 2769 1.668793 TGTCACACAGCGCATCCAG 60.669 57.895 11.47 0.00 0.00 3.86
2765 2770 2.743538 TCACACAGCGCATCCAGC 60.744 61.111 11.47 0.00 40.87 4.85
2766 2771 3.807538 CACACAGCGCATCCAGCC 61.808 66.667 11.47 0.00 41.38 4.85
2798 2803 4.329545 GAGGAGCCACGCCACCAA 62.330 66.667 0.00 0.00 0.00 3.67
2799 2804 4.643387 AGGAGCCACGCCACCAAC 62.643 66.667 0.00 0.00 0.00 3.77
2836 2841 4.767255 GGAGGTGTGGCAGCGAGG 62.767 72.222 0.00 0.00 36.92 4.63
2837 2842 3.695606 GAGGTGTGGCAGCGAGGA 61.696 66.667 0.00 0.00 36.92 3.71
2838 2843 3.655810 GAGGTGTGGCAGCGAGGAG 62.656 68.421 0.00 0.00 36.92 3.69
2862 2867 4.367340 CGCGCACGCACACATCAA 62.367 61.111 16.04 0.00 42.06 2.57
2863 2868 2.500369 GCGCACGCACACATCAAG 60.500 61.111 10.65 0.00 41.49 3.02
2864 2869 2.500369 CGCACGCACACATCAAGC 60.500 61.111 0.00 0.00 0.00 4.01
2865 2870 2.949106 GCACGCACACATCAAGCT 59.051 55.556 0.00 0.00 0.00 3.74
2866 2871 1.441515 GCACGCACACATCAAGCTG 60.442 57.895 0.00 0.00 0.00 4.24
2867 2872 1.944035 CACGCACACATCAAGCTGT 59.056 52.632 0.00 0.00 0.00 4.40
2868 2873 0.110509 CACGCACACATCAAGCTGTC 60.111 55.000 0.00 0.00 0.00 3.51
2869 2874 0.532640 ACGCACACATCAAGCTGTCA 60.533 50.000 0.00 0.00 0.00 3.58
2870 2875 0.110509 CGCACACATCAAGCTGTCAC 60.111 55.000 0.00 0.00 0.00 3.67
2871 2876 0.110509 GCACACATCAAGCTGTCACG 60.111 55.000 0.00 0.00 0.00 4.35
2872 2877 0.514255 CACACATCAAGCTGTCACGG 59.486 55.000 0.00 0.00 0.00 4.94
2873 2878 0.106708 ACACATCAAGCTGTCACGGT 59.893 50.000 0.00 0.00 0.00 4.83
2874 2879 0.792640 CACATCAAGCTGTCACGGTC 59.207 55.000 0.00 0.00 0.00 4.79
2875 2880 0.667487 ACATCAAGCTGTCACGGTCG 60.667 55.000 0.00 0.00 0.00 4.79
2876 2881 0.667487 CATCAAGCTGTCACGGTCGT 60.667 55.000 0.00 0.00 0.00 4.34
2877 2882 0.388649 ATCAAGCTGTCACGGTCGTC 60.389 55.000 0.00 0.00 0.00 4.20
2878 2883 2.050351 AAGCTGTCACGGTCGTCG 60.050 61.111 0.00 0.00 45.88 5.12
2879 2884 2.549198 AAGCTGTCACGGTCGTCGA 61.549 57.895 7.78 0.00 42.43 4.20
2880 2885 2.728427 AAGCTGTCACGGTCGTCGAC 62.728 60.000 17.16 17.16 42.43 4.20
2881 2886 2.635338 CTGTCACGGTCGTCGACA 59.365 61.111 25.64 19.24 42.43 4.35
2882 2887 1.209383 CTGTCACGGTCGTCGACAT 59.791 57.895 25.64 11.30 42.43 3.06
2883 2888 0.793478 CTGTCACGGTCGTCGACATC 60.793 60.000 25.64 9.40 42.43 3.06
2884 2889 1.513586 GTCACGGTCGTCGACATCC 60.514 63.158 25.64 15.21 42.43 3.51
2885 2890 2.202570 CACGGTCGTCGACATCCC 60.203 66.667 25.64 10.48 42.43 3.85
2886 2891 3.807538 ACGGTCGTCGACATCCCG 61.808 66.667 26.48 26.48 44.06 5.14
2888 2893 4.867599 GGTCGTCGACATCCCGCC 62.868 72.222 25.64 3.89 33.68 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
320 321 1.376543 GGTGGCAGTGACATGATCTG 58.623 55.000 0.00 5.98 0.00 2.90
321 322 0.254178 GGGTGGCAGTGACATGATCT 59.746 55.000 0.00 0.00 0.00 2.75
358 359 9.643693 AACCACATTGATGATAAAAGTTCATTC 57.356 29.630 0.00 0.00 34.03 2.67
462 463 2.104111 TCTCCCGTGTCACATCTTTTGT 59.896 45.455 3.42 0.00 39.91 2.83
534 536 8.446273 TCTTCTGATTCTTCTTAAGCAATTTCG 58.554 33.333 0.00 0.00 0.00 3.46
574 576 8.000709 ACCATTCAAACATATCAGATATGGTGT 58.999 33.333 27.29 15.14 42.11 4.16
599 601 5.243426 TGAGCCTTCACTTGTAAAACAAC 57.757 39.130 0.00 0.00 33.96 3.32
619 621 2.303022 GAGTGGTTGGGAGAACTCATGA 59.697 50.000 0.00 0.00 39.09 3.07
850 852 1.016130 CGGTCGATCAAAGCAGCTGT 61.016 55.000 16.64 0.00 0.00 4.40
879 881 3.136641 AGAATAAGCTCCTTGAGGGGA 57.863 47.619 0.00 0.00 38.16 4.81
948 950 6.291377 CACCAGGCTATAGAAATAGAAGCAA 58.709 40.000 3.21 0.00 37.84 3.91
1014 1016 3.005539 ACCTCTGCACGGCCAGAT 61.006 61.111 2.24 0.00 40.77 2.90
1074 1076 1.565156 GAATGCGCTCACCGAACACA 61.565 55.000 9.73 0.00 40.02 3.72
1098 1100 1.166531 GCCTGAACTGTGCTTCCGTT 61.167 55.000 0.00 0.00 0.00 4.44
1226 1228 3.256960 TGGTGGAGTGGCTTCCCC 61.257 66.667 6.23 7.38 36.35 4.81
1244 1246 4.160635 CGGCGATGGCGTTTGGAC 62.161 66.667 0.00 0.00 46.33 4.02
1364 1366 2.443394 GGGGACGATGATGCCTGGA 61.443 63.158 0.00 0.00 0.00 3.86
1380 1382 3.528370 CCACGGGCTAGAGACGGG 61.528 72.222 0.00 0.00 0.00 5.28
1394 1396 3.902162 TTGTCGTAGCCGTCGCCAC 62.902 63.158 0.00 0.00 34.57 5.01
1395 1397 3.620300 CTTGTCGTAGCCGTCGCCA 62.620 63.158 0.00 0.00 34.57 5.69
1622 1624 2.981921 TGATATCCCTCTGCTGGATGT 58.018 47.619 0.00 0.00 42.57 3.06
1638 1640 1.803922 CAGCGCCGACGTGTTGATA 60.804 57.895 2.29 0.00 42.83 2.15
1689 1691 2.360350 AGCAGGTGTCGCAATGGG 60.360 61.111 0.00 0.00 0.00 4.00
1773 1775 2.983229 TGCTTCTGCATCTTCCTCTTC 58.017 47.619 0.00 0.00 45.31 2.87
1972 1974 7.987750 TTCAAATTAGTTAGGTATGTGTGCA 57.012 32.000 0.00 0.00 0.00 4.57
2036 2038 4.535781 CCCCTAATCCATTCATTCACACA 58.464 43.478 0.00 0.00 0.00 3.72
2038 2040 3.790976 TCCCCCTAATCCATTCATTCACA 59.209 43.478 0.00 0.00 0.00 3.58
2048 2050 5.103129 ACATTTGATCATTCCCCCTAATCCA 60.103 40.000 0.00 0.00 0.00 3.41
2105 2110 9.813826 ATAATTATAAAGAATGCTAGCCACCTT 57.186 29.630 13.29 9.32 0.00 3.50
2140 2145 9.481340 CTTCTTCATCGATTGACCATAAGATAA 57.519 33.333 0.00 0.00 32.84 1.75
2141 2146 8.642432 ACTTCTTCATCGATTGACCATAAGATA 58.358 33.333 0.00 0.00 32.84 1.98
2142 2147 7.504403 ACTTCTTCATCGATTGACCATAAGAT 58.496 34.615 0.00 0.00 32.84 2.40
2143 2148 6.878317 ACTTCTTCATCGATTGACCATAAGA 58.122 36.000 0.00 0.00 32.84 2.10
2144 2149 6.758416 TGACTTCTTCATCGATTGACCATAAG 59.242 38.462 0.00 0.00 32.84 1.73
2145 2150 6.639563 TGACTTCTTCATCGATTGACCATAA 58.360 36.000 0.00 0.00 32.84 1.90
2146 2151 6.096846 TCTGACTTCTTCATCGATTGACCATA 59.903 38.462 0.00 0.00 32.84 2.74
2147 2152 5.089970 TGACTTCTTCATCGATTGACCAT 57.910 39.130 0.00 0.00 32.84 3.55
2148 2153 4.220602 TCTGACTTCTTCATCGATTGACCA 59.779 41.667 0.00 0.00 32.84 4.02
2149 2154 4.748892 TCTGACTTCTTCATCGATTGACC 58.251 43.478 0.00 0.00 32.84 4.02
2150 2155 5.645624 TCTCTGACTTCTTCATCGATTGAC 58.354 41.667 0.00 0.00 32.84 3.18
2151 2156 5.904362 TCTCTGACTTCTTCATCGATTGA 57.096 39.130 0.00 0.00 32.17 2.57
2152 2157 7.536895 AAATCTCTGACTTCTTCATCGATTG 57.463 36.000 0.00 0.00 35.13 2.67
2153 2158 7.605691 ACAAAATCTCTGACTTCTTCATCGATT 59.394 33.333 0.00 0.00 35.83 3.34
2154 2159 7.102346 ACAAAATCTCTGACTTCTTCATCGAT 58.898 34.615 0.00 0.00 32.17 3.59
2155 2160 6.459066 ACAAAATCTCTGACTTCTTCATCGA 58.541 36.000 0.00 0.00 32.17 3.59
2156 2161 6.183360 GGACAAAATCTCTGACTTCTTCATCG 60.183 42.308 0.00 0.00 32.17 3.84
2157 2162 6.878389 AGGACAAAATCTCTGACTTCTTCATC 59.122 38.462 0.00 0.00 32.17 2.92
2158 2163 6.777782 AGGACAAAATCTCTGACTTCTTCAT 58.222 36.000 0.00 0.00 32.17 2.57
2159 2164 6.042552 AGAGGACAAAATCTCTGACTTCTTCA 59.957 38.462 0.00 0.00 38.75 3.02
2160 2165 6.463360 AGAGGACAAAATCTCTGACTTCTTC 58.537 40.000 0.00 0.00 38.75 2.87
2161 2166 6.432403 AGAGGACAAAATCTCTGACTTCTT 57.568 37.500 0.00 0.00 38.75 2.52
2162 2167 6.432403 AAGAGGACAAAATCTCTGACTTCT 57.568 37.500 0.00 0.00 39.95 2.85
2163 2168 6.484977 ACAAAGAGGACAAAATCTCTGACTTC 59.515 38.462 0.00 0.00 39.95 3.01
2164 2169 6.360618 ACAAAGAGGACAAAATCTCTGACTT 58.639 36.000 0.00 0.00 39.95 3.01
2165 2170 5.934781 ACAAAGAGGACAAAATCTCTGACT 58.065 37.500 0.00 0.00 39.95 3.41
2166 2171 5.760253 TGACAAAGAGGACAAAATCTCTGAC 59.240 40.000 0.00 0.00 39.95 3.51
2167 2172 5.928976 TGACAAAGAGGACAAAATCTCTGA 58.071 37.500 0.00 0.00 39.95 3.27
2168 2173 5.994054 TCTGACAAAGAGGACAAAATCTCTG 59.006 40.000 0.00 0.00 39.95 3.35
2169 2174 6.179906 TCTGACAAAGAGGACAAAATCTCT 57.820 37.500 0.00 0.00 41.63 3.10
2186 2191 8.956426 GGTGATTTTGGATAAATAACTCTGACA 58.044 33.333 0.00 0.00 0.00 3.58
2187 2192 8.956426 TGGTGATTTTGGATAAATAACTCTGAC 58.044 33.333 0.00 0.00 0.00 3.51
2188 2193 8.956426 GTGGTGATTTTGGATAAATAACTCTGA 58.044 33.333 0.00 0.00 0.00 3.27
2189 2194 8.739039 TGTGGTGATTTTGGATAAATAACTCTG 58.261 33.333 0.00 0.00 0.00 3.35
2190 2195 8.739972 GTGTGGTGATTTTGGATAAATAACTCT 58.260 33.333 0.00 0.00 0.00 3.24
2191 2196 8.739972 AGTGTGGTGATTTTGGATAAATAACTC 58.260 33.333 0.00 0.00 0.00 3.01
2192 2197 8.650143 AGTGTGGTGATTTTGGATAAATAACT 57.350 30.769 0.00 0.00 0.00 2.24
2193 2198 9.139174 CAAGTGTGGTGATTTTGGATAAATAAC 57.861 33.333 0.00 0.00 0.00 1.89
2194 2199 8.310382 CCAAGTGTGGTGATTTTGGATAAATAA 58.690 33.333 0.00 0.00 40.52 1.40
2195 2200 7.093552 CCCAAGTGTGGTGATTTTGGATAAATA 60.094 37.037 3.27 0.00 44.30 1.40
2196 2201 6.295802 CCCAAGTGTGGTGATTTTGGATAAAT 60.296 38.462 3.27 0.00 44.30 1.40
2197 2202 5.011533 CCCAAGTGTGGTGATTTTGGATAAA 59.988 40.000 3.27 0.00 44.30 1.40
2198 2203 4.526262 CCCAAGTGTGGTGATTTTGGATAA 59.474 41.667 3.27 0.00 44.30 1.75
2199 2204 4.085733 CCCAAGTGTGGTGATTTTGGATA 58.914 43.478 3.27 0.00 44.30 2.59
2200 2205 2.899256 CCCAAGTGTGGTGATTTTGGAT 59.101 45.455 3.27 0.00 44.30 3.41
2201 2206 2.315176 CCCAAGTGTGGTGATTTTGGA 58.685 47.619 3.27 0.00 44.30 3.53
2202 2207 2.038659 ACCCAAGTGTGGTGATTTTGG 58.961 47.619 0.00 0.00 44.30 3.28
2203 2208 3.817709 AACCCAAGTGTGGTGATTTTG 57.182 42.857 0.00 0.00 44.30 2.44
2204 2209 3.895041 CCTAACCCAAGTGTGGTGATTTT 59.105 43.478 0.00 0.00 44.30 1.82
2205 2210 3.496331 CCTAACCCAAGTGTGGTGATTT 58.504 45.455 0.00 0.00 44.30 2.17
2206 2211 2.225017 CCCTAACCCAAGTGTGGTGATT 60.225 50.000 0.00 0.00 44.30 2.57
2207 2212 1.354368 CCCTAACCCAAGTGTGGTGAT 59.646 52.381 0.00 0.00 44.30 3.06
2208 2213 0.768622 CCCTAACCCAAGTGTGGTGA 59.231 55.000 0.00 0.00 44.30 4.02
2209 2214 0.476771 ACCCTAACCCAAGTGTGGTG 59.523 55.000 0.00 0.00 44.30 4.17
2210 2215 2.107031 GTTACCCTAACCCAAGTGTGGT 59.893 50.000 0.00 0.00 44.30 4.16
2211 2216 2.106857 TGTTACCCTAACCCAAGTGTGG 59.893 50.000 0.00 0.00 45.53 4.17
2212 2217 3.495434 TGTTACCCTAACCCAAGTGTG 57.505 47.619 0.00 0.00 37.88 3.82
2213 2218 3.460712 AGTTGTTACCCTAACCCAAGTGT 59.539 43.478 0.00 0.00 37.88 3.55
2214 2219 4.094830 AGTTGTTACCCTAACCCAAGTG 57.905 45.455 0.00 0.00 37.88 3.16
2215 2220 4.166531 TCAAGTTGTTACCCTAACCCAAGT 59.833 41.667 2.11 0.00 37.88 3.16
2216 2221 4.721132 TCAAGTTGTTACCCTAACCCAAG 58.279 43.478 2.11 0.00 37.88 3.61
2217 2222 4.792513 TCAAGTTGTTACCCTAACCCAA 57.207 40.909 2.11 0.00 37.88 4.12
2218 2223 4.658063 CATCAAGTTGTTACCCTAACCCA 58.342 43.478 2.11 0.00 37.88 4.51
2219 2224 3.442625 GCATCAAGTTGTTACCCTAACCC 59.557 47.826 2.11 0.00 37.88 4.11
2220 2225 3.442625 GGCATCAAGTTGTTACCCTAACC 59.557 47.826 2.11 0.00 37.88 2.85
2221 2226 4.076394 TGGCATCAAGTTGTTACCCTAAC 58.924 43.478 2.11 0.00 39.11 2.34
2222 2227 4.374689 TGGCATCAAGTTGTTACCCTAA 57.625 40.909 2.11 0.00 0.00 2.69
2223 2228 4.584638 ATGGCATCAAGTTGTTACCCTA 57.415 40.909 2.11 0.00 0.00 3.53
2224 2229 2.969821 TGGCATCAAGTTGTTACCCT 57.030 45.000 2.11 0.00 0.00 4.34
2225 2230 5.852282 AATATGGCATCAAGTTGTTACCC 57.148 39.130 1.65 0.81 0.00 3.69
2226 2231 8.413229 ACATAAATATGGCATCAAGTTGTTACC 58.587 33.333 1.65 0.00 38.00 2.85
2227 2232 9.450807 GACATAAATATGGCATCAAGTTGTTAC 57.549 33.333 1.65 0.00 41.42 2.50
2228 2233 9.183368 TGACATAAATATGGCATCAAGTTGTTA 57.817 29.630 1.65 0.00 46.26 2.41
2229 2234 8.065473 TGACATAAATATGGCATCAAGTTGTT 57.935 30.769 1.65 0.00 46.26 2.83
2230 2235 7.643569 TGACATAAATATGGCATCAAGTTGT 57.356 32.000 1.65 4.08 46.26 3.32
2240 2245 3.221771 TGTGCCCTGACATAAATATGGC 58.778 45.455 5.48 2.47 42.14 4.40
2241 2246 5.850557 TTTGTGCCCTGACATAAATATGG 57.149 39.130 5.48 0.00 38.00 2.74
2242 2247 6.534793 GGTTTTTGTGCCCTGACATAAATATG 59.465 38.462 0.00 0.00 39.55 1.78
2243 2248 6.351796 GGGTTTTTGTGCCCTGACATAAATAT 60.352 38.462 0.00 0.00 41.63 1.28
2244 2249 5.046950 GGGTTTTTGTGCCCTGACATAAATA 60.047 40.000 0.00 0.00 41.63 1.40
2245 2250 4.262851 GGGTTTTTGTGCCCTGACATAAAT 60.263 41.667 0.00 0.00 41.63 1.40
2246 2251 3.070302 GGGTTTTTGTGCCCTGACATAAA 59.930 43.478 0.00 0.00 41.63 1.40
2247 2252 2.630580 GGGTTTTTGTGCCCTGACATAA 59.369 45.455 0.00 0.00 41.63 1.90
2248 2253 2.243810 GGGTTTTTGTGCCCTGACATA 58.756 47.619 0.00 0.00 41.63 2.29
2249 2254 1.047801 GGGTTTTTGTGCCCTGACAT 58.952 50.000 0.00 0.00 41.63 3.06
2250 2255 0.324738 TGGGTTTTTGTGCCCTGACA 60.325 50.000 0.00 0.00 45.06 3.58
2251 2256 0.104120 GTGGGTTTTTGTGCCCTGAC 59.896 55.000 0.00 0.00 45.06 3.51
2252 2257 1.388065 CGTGGGTTTTTGTGCCCTGA 61.388 55.000 0.00 0.00 45.06 3.86
2253 2258 1.067250 CGTGGGTTTTTGTGCCCTG 59.933 57.895 0.00 0.00 45.06 4.45
2254 2259 0.684805 TTCGTGGGTTTTTGTGCCCT 60.685 50.000 0.00 0.00 45.06 5.19
2255 2260 0.175989 TTTCGTGGGTTTTTGTGCCC 59.824 50.000 0.00 0.00 45.04 5.36
2256 2261 2.232756 ATTTCGTGGGTTTTTGTGCC 57.767 45.000 0.00 0.00 0.00 5.01
2257 2262 2.286125 GCAATTTCGTGGGTTTTTGTGC 60.286 45.455 0.00 0.00 0.00 4.57
2258 2263 2.034170 CGCAATTTCGTGGGTTTTTGTG 60.034 45.455 0.00 0.00 0.00 3.33
2259 2264 2.197577 CGCAATTTCGTGGGTTTTTGT 58.802 42.857 0.00 0.00 0.00 2.83
2260 2265 1.070909 GCGCAATTTCGTGGGTTTTTG 60.071 47.619 0.30 0.00 34.12 2.44
2261 2266 1.213491 GCGCAATTTCGTGGGTTTTT 58.787 45.000 0.30 0.00 34.12 1.94
2262 2267 0.598942 GGCGCAATTTCGTGGGTTTT 60.599 50.000 10.83 0.00 34.12 2.43
2263 2268 1.006688 GGCGCAATTTCGTGGGTTT 60.007 52.632 10.83 0.00 34.12 3.27
2264 2269 0.606944 TAGGCGCAATTTCGTGGGTT 60.607 50.000 10.83 0.00 34.12 4.11
2265 2270 0.606944 TTAGGCGCAATTTCGTGGGT 60.607 50.000 10.83 0.00 34.12 4.51
2266 2271 0.738389 ATTAGGCGCAATTTCGTGGG 59.262 50.000 10.83 0.00 34.70 4.61
2267 2272 1.670811 AGATTAGGCGCAATTTCGTGG 59.329 47.619 10.83 0.00 0.00 4.94
2268 2273 4.732285 ATAGATTAGGCGCAATTTCGTG 57.268 40.909 10.83 0.00 0.00 4.35
2269 2274 5.107607 CGTTATAGATTAGGCGCAATTTCGT 60.108 40.000 10.83 0.00 0.00 3.85
2270 2275 5.305812 CGTTATAGATTAGGCGCAATTTCG 58.694 41.667 10.83 0.00 0.00 3.46
2271 2276 5.080068 GCGTTATAGATTAGGCGCAATTTC 58.920 41.667 10.83 0.00 43.62 2.17
2272 2277 5.030874 GCGTTATAGATTAGGCGCAATTT 57.969 39.130 10.83 0.00 43.62 1.82
2273 2278 4.663636 GCGTTATAGATTAGGCGCAATT 57.336 40.909 10.83 0.00 43.62 2.32
2277 2282 3.664537 GCTTTGCGTTATAGATTAGGCGC 60.665 47.826 0.00 0.00 44.29 6.53
2278 2283 3.493129 TGCTTTGCGTTATAGATTAGGCG 59.507 43.478 0.00 0.00 0.00 5.52
2279 2284 4.511826 AGTGCTTTGCGTTATAGATTAGGC 59.488 41.667 0.00 0.00 0.00 3.93
2280 2285 5.050091 CCAGTGCTTTGCGTTATAGATTAGG 60.050 44.000 0.00 0.00 0.00 2.69
2281 2286 5.523916 ACCAGTGCTTTGCGTTATAGATTAG 59.476 40.000 0.00 0.00 0.00 1.73
2282 2287 5.424757 ACCAGTGCTTTGCGTTATAGATTA 58.575 37.500 0.00 0.00 0.00 1.75
2283 2288 4.261801 ACCAGTGCTTTGCGTTATAGATT 58.738 39.130 0.00 0.00 0.00 2.40
2284 2289 3.873910 ACCAGTGCTTTGCGTTATAGAT 58.126 40.909 0.00 0.00 0.00 1.98
2285 2290 3.328382 ACCAGTGCTTTGCGTTATAGA 57.672 42.857 0.00 0.00 0.00 1.98
2286 2291 4.181578 AGTACCAGTGCTTTGCGTTATAG 58.818 43.478 0.00 0.00 0.00 1.31
2287 2292 4.178540 GAGTACCAGTGCTTTGCGTTATA 58.821 43.478 0.00 0.00 0.00 0.98
2288 2293 3.000727 GAGTACCAGTGCTTTGCGTTAT 58.999 45.455 0.00 0.00 0.00 1.89
2289 2294 2.224090 TGAGTACCAGTGCTTTGCGTTA 60.224 45.455 0.00 0.00 0.00 3.18
2290 2295 1.226746 GAGTACCAGTGCTTTGCGTT 58.773 50.000 0.00 0.00 0.00 4.84
2291 2296 0.105964 TGAGTACCAGTGCTTTGCGT 59.894 50.000 0.00 0.00 0.00 5.24
2292 2297 0.792640 CTGAGTACCAGTGCTTTGCG 59.207 55.000 3.86 0.00 38.10 4.85
2293 2298 2.169832 TCTGAGTACCAGTGCTTTGC 57.830 50.000 10.08 0.00 43.38 3.68
2294 2299 4.083110 CCAAATCTGAGTACCAGTGCTTTG 60.083 45.833 10.08 14.54 43.38 2.77
2295 2300 4.074970 CCAAATCTGAGTACCAGTGCTTT 58.925 43.478 10.08 7.09 43.38 3.51
2296 2301 3.073062 ACCAAATCTGAGTACCAGTGCTT 59.927 43.478 10.08 2.81 43.38 3.91
2297 2302 2.639839 ACCAAATCTGAGTACCAGTGCT 59.360 45.455 10.08 0.00 43.38 4.40
2298 2303 3.059352 ACCAAATCTGAGTACCAGTGC 57.941 47.619 10.08 0.00 43.38 4.40
2299 2304 4.641396 TCAACCAAATCTGAGTACCAGTG 58.359 43.478 10.08 3.57 43.38 3.66
2300 2305 4.593206 TCTCAACCAAATCTGAGTACCAGT 59.407 41.667 10.08 0.00 43.38 4.00
2301 2306 5.152623 TCTCAACCAAATCTGAGTACCAG 57.847 43.478 5.31 5.31 44.27 4.00
2302 2307 5.560722 TTCTCAACCAAATCTGAGTACCA 57.439 39.130 0.00 0.00 40.06 3.25
2303 2308 6.262273 TGTTTTCTCAACCAAATCTGAGTACC 59.738 38.462 0.00 0.00 40.06 3.34
2304 2309 7.259290 TGTTTTCTCAACCAAATCTGAGTAC 57.741 36.000 0.00 0.00 40.06 2.73
2305 2310 6.017109 GCTGTTTTCTCAACCAAATCTGAGTA 60.017 38.462 0.00 0.00 40.06 2.59
2306 2311 5.221126 GCTGTTTTCTCAACCAAATCTGAGT 60.221 40.000 0.00 0.00 40.06 3.41
2307 2312 5.218139 GCTGTTTTCTCAACCAAATCTGAG 58.782 41.667 0.00 0.00 40.42 3.35
2308 2313 4.644234 TGCTGTTTTCTCAACCAAATCTGA 59.356 37.500 0.00 0.00 0.00 3.27
2309 2314 4.935702 TGCTGTTTTCTCAACCAAATCTG 58.064 39.130 0.00 0.00 0.00 2.90
2310 2315 5.596836 TTGCTGTTTTCTCAACCAAATCT 57.403 34.783 0.00 0.00 0.00 2.40
2311 2316 6.313658 AGTTTTGCTGTTTTCTCAACCAAATC 59.686 34.615 0.00 0.00 0.00 2.17
2312 2317 6.092533 CAGTTTTGCTGTTTTCTCAACCAAAT 59.907 34.615 0.00 0.00 40.27 2.32
2313 2318 5.407995 CAGTTTTGCTGTTTTCTCAACCAAA 59.592 36.000 0.00 0.00 40.27 3.28
2314 2319 4.928615 CAGTTTTGCTGTTTTCTCAACCAA 59.071 37.500 0.00 0.00 40.27 3.67
2315 2320 4.219507 TCAGTTTTGCTGTTTTCTCAACCA 59.780 37.500 0.00 0.00 45.23 3.67
2316 2321 4.562789 GTCAGTTTTGCTGTTTTCTCAACC 59.437 41.667 0.00 0.00 45.23 3.77
2317 2322 5.160641 TGTCAGTTTTGCTGTTTTCTCAAC 58.839 37.500 0.00 0.00 45.23 3.18
2318 2323 5.384063 TGTCAGTTTTGCTGTTTTCTCAA 57.616 34.783 0.00 0.00 45.23 3.02
2319 2324 5.125257 TCATGTCAGTTTTGCTGTTTTCTCA 59.875 36.000 0.00 0.00 45.23 3.27
2320 2325 5.581605 TCATGTCAGTTTTGCTGTTTTCTC 58.418 37.500 0.00 0.00 45.23 2.87
2321 2326 5.581126 TCATGTCAGTTTTGCTGTTTTCT 57.419 34.783 0.00 0.00 45.23 2.52
2322 2327 5.176223 CCATCATGTCAGTTTTGCTGTTTTC 59.824 40.000 0.00 0.00 45.23 2.29
2323 2328 5.051816 CCATCATGTCAGTTTTGCTGTTTT 58.948 37.500 0.00 0.00 45.23 2.43
2324 2329 4.501915 CCCATCATGTCAGTTTTGCTGTTT 60.502 41.667 0.00 0.00 45.23 2.83
2325 2330 3.006110 CCCATCATGTCAGTTTTGCTGTT 59.994 43.478 0.00 0.00 45.23 3.16
2326 2331 2.559668 CCCATCATGTCAGTTTTGCTGT 59.440 45.455 0.00 0.00 45.23 4.40
2327 2332 2.673043 GCCCATCATGTCAGTTTTGCTG 60.673 50.000 0.00 0.00 46.34 4.41
2328 2333 1.547372 GCCCATCATGTCAGTTTTGCT 59.453 47.619 0.00 0.00 0.00 3.91
2329 2334 1.404583 GGCCCATCATGTCAGTTTTGC 60.405 52.381 0.00 0.00 0.00 3.68
2330 2335 1.205417 GGGCCCATCATGTCAGTTTTG 59.795 52.381 19.95 0.00 0.00 2.44
2331 2336 1.560505 GGGCCCATCATGTCAGTTTT 58.439 50.000 19.95 0.00 0.00 2.43
2332 2337 0.680921 CGGGCCCATCATGTCAGTTT 60.681 55.000 24.92 0.00 0.00 2.66
2333 2338 1.077501 CGGGCCCATCATGTCAGTT 60.078 57.895 24.92 0.00 0.00 3.16
2334 2339 2.591753 CGGGCCCATCATGTCAGT 59.408 61.111 24.92 0.00 0.00 3.41
2335 2340 2.903855 GCGGGCCCATCATGTCAG 60.904 66.667 24.92 2.32 0.00 3.51
2336 2341 4.504596 GGCGGGCCCATCATGTCA 62.505 66.667 24.92 0.00 0.00 3.58
2337 2342 4.195334 AGGCGGGCCCATCATGTC 62.195 66.667 24.92 6.31 36.58 3.06
2338 2343 4.511246 CAGGCGGGCCCATCATGT 62.511 66.667 24.92 0.00 36.58 3.21
2339 2344 4.511246 ACAGGCGGGCCCATCATG 62.511 66.667 24.92 22.14 36.58 3.07
2340 2345 4.195334 GACAGGCGGGCCCATCAT 62.195 66.667 24.92 7.60 36.58 2.45
2342 2347 4.864334 CTGACAGGCGGGCCCATC 62.864 72.222 24.92 13.33 36.58 3.51
2352 2357 0.738762 CGACACATCAGCCTGACAGG 60.739 60.000 17.83 17.83 38.80 4.00
2353 2358 0.244721 TCGACACATCAGCCTGACAG 59.755 55.000 0.00 0.00 0.00 3.51
2354 2359 0.678950 TTCGACACATCAGCCTGACA 59.321 50.000 0.00 0.00 0.00 3.58
2355 2360 1.067565 TCTTCGACACATCAGCCTGAC 60.068 52.381 0.00 0.00 0.00 3.51
2356 2361 1.067565 GTCTTCGACACATCAGCCTGA 60.068 52.381 0.00 0.00 32.09 3.86
2357 2362 1.354040 GTCTTCGACACATCAGCCTG 58.646 55.000 0.00 0.00 32.09 4.85
2358 2363 0.247736 GGTCTTCGACACATCAGCCT 59.752 55.000 0.00 0.00 33.68 4.58
2359 2364 0.037326 TGGTCTTCGACACATCAGCC 60.037 55.000 0.00 0.00 33.68 4.85
2360 2365 1.795768 TTGGTCTTCGACACATCAGC 58.204 50.000 0.00 0.00 33.68 4.26
2361 2366 4.273480 AGTTTTTGGTCTTCGACACATCAG 59.727 41.667 0.00 0.00 33.68 2.90
2362 2367 4.196193 AGTTTTTGGTCTTCGACACATCA 58.804 39.130 0.00 0.00 33.68 3.07
2363 2368 4.813296 AGTTTTTGGTCTTCGACACATC 57.187 40.909 0.00 0.00 33.68 3.06
2364 2369 5.124776 TCAAAGTTTTTGGTCTTCGACACAT 59.875 36.000 2.09 0.00 33.68 3.21
2365 2370 4.456222 TCAAAGTTTTTGGTCTTCGACACA 59.544 37.500 2.09 0.00 33.68 3.72
2366 2371 4.791676 GTCAAAGTTTTTGGTCTTCGACAC 59.208 41.667 2.09 0.00 33.68 3.67
2367 2372 4.142556 GGTCAAAGTTTTTGGTCTTCGACA 60.143 41.667 2.09 0.00 31.62 4.35
2368 2373 4.142556 TGGTCAAAGTTTTTGGTCTTCGAC 60.143 41.667 2.09 0.00 29.90 4.20
2369 2374 4.011023 TGGTCAAAGTTTTTGGTCTTCGA 58.989 39.130 2.09 0.00 0.00 3.71
2370 2375 4.364415 TGGTCAAAGTTTTTGGTCTTCG 57.636 40.909 2.09 0.00 0.00 3.79
2371 2376 5.576774 CAGTTGGTCAAAGTTTTTGGTCTTC 59.423 40.000 2.09 0.00 0.00 2.87
2372 2377 5.245075 TCAGTTGGTCAAAGTTTTTGGTCTT 59.755 36.000 2.09 0.00 0.00 3.01
2373 2378 4.770010 TCAGTTGGTCAAAGTTTTTGGTCT 59.230 37.500 2.09 0.00 0.00 3.85
2374 2379 5.066968 TCAGTTGGTCAAAGTTTTTGGTC 57.933 39.130 2.09 0.00 0.00 4.02
2375 2380 5.046663 ACATCAGTTGGTCAAAGTTTTTGGT 60.047 36.000 2.09 0.00 0.00 3.67
2376 2381 5.291614 CACATCAGTTGGTCAAAGTTTTTGG 59.708 40.000 2.09 0.00 0.00 3.28
2377 2382 5.291614 CCACATCAGTTGGTCAAAGTTTTTG 59.708 40.000 0.00 0.00 0.00 2.44
2378 2383 5.418676 CCACATCAGTTGGTCAAAGTTTTT 58.581 37.500 0.00 0.00 0.00 1.94
2379 2384 4.680440 GCCACATCAGTTGGTCAAAGTTTT 60.680 41.667 0.00 0.00 0.00 2.43
2380 2385 3.181476 GCCACATCAGTTGGTCAAAGTTT 60.181 43.478 0.00 0.00 0.00 2.66
2381 2386 2.362077 GCCACATCAGTTGGTCAAAGTT 59.638 45.455 0.00 0.00 0.00 2.66
2382 2387 1.956477 GCCACATCAGTTGGTCAAAGT 59.044 47.619 0.00 0.00 0.00 2.66
2383 2388 1.955778 TGCCACATCAGTTGGTCAAAG 59.044 47.619 0.00 0.00 0.00 2.77
2384 2389 2.064434 TGCCACATCAGTTGGTCAAA 57.936 45.000 0.00 0.00 0.00 2.69
2385 2390 2.064434 TTGCCACATCAGTTGGTCAA 57.936 45.000 0.00 0.00 0.00 3.18
2386 2391 2.064434 TTTGCCACATCAGTTGGTCA 57.936 45.000 0.00 0.00 0.00 4.02
2387 2392 2.557924 TCATTTGCCACATCAGTTGGTC 59.442 45.455 0.00 0.00 0.00 4.02
2388 2393 2.559668 CTCATTTGCCACATCAGTTGGT 59.440 45.455 0.00 0.00 0.00 3.67
2389 2394 2.559668 ACTCATTTGCCACATCAGTTGG 59.440 45.455 0.00 0.00 0.00 3.77
2390 2395 3.668757 CGACTCATTTGCCACATCAGTTG 60.669 47.826 0.00 0.00 0.00 3.16
2391 2396 2.485426 CGACTCATTTGCCACATCAGTT 59.515 45.455 0.00 0.00 0.00 3.16
2392 2397 2.079158 CGACTCATTTGCCACATCAGT 58.921 47.619 0.00 0.00 0.00 3.41
2393 2398 2.079158 ACGACTCATTTGCCACATCAG 58.921 47.619 0.00 0.00 0.00 2.90
2394 2399 1.805943 CACGACTCATTTGCCACATCA 59.194 47.619 0.00 0.00 0.00 3.07
2395 2400 1.806542 ACACGACTCATTTGCCACATC 59.193 47.619 0.00 0.00 0.00 3.06
2396 2401 1.536766 CACACGACTCATTTGCCACAT 59.463 47.619 0.00 0.00 0.00 3.21
2397 2402 0.943673 CACACGACTCATTTGCCACA 59.056 50.000 0.00 0.00 0.00 4.17
2398 2403 0.385974 GCACACGACTCATTTGCCAC 60.386 55.000 0.00 0.00 0.00 5.01
2399 2404 1.948508 GCACACGACTCATTTGCCA 59.051 52.632 0.00 0.00 0.00 4.92
2400 2405 1.210155 GGCACACGACTCATTTGCC 59.790 57.895 0.00 0.00 45.64 4.52
2401 2406 1.210155 GGGCACACGACTCATTTGC 59.790 57.895 0.00 0.00 0.00 3.68
2402 2407 0.888736 TGGGGCACACGACTCATTTG 60.889 55.000 0.00 0.00 0.00 2.32
2403 2408 0.889186 GTGGGGCACACGACTCATTT 60.889 55.000 3.09 0.00 40.85 2.32
2404 2409 1.302511 GTGGGGCACACGACTCATT 60.303 57.895 3.09 0.00 40.85 2.57
2405 2410 2.347490 GTGGGGCACACGACTCAT 59.653 61.111 3.09 0.00 40.85 2.90
2413 2418 1.228521 CATTGACAGGTGGGGCACA 60.229 57.895 0.00 0.00 35.86 4.57
2414 2419 1.074775 TCATTGACAGGTGGGGCAC 59.925 57.895 0.00 0.00 0.00 5.01
2415 2420 1.074775 GTCATTGACAGGTGGGGCA 59.925 57.895 11.93 0.00 32.09 5.36
2416 2421 0.618458 TAGTCATTGACAGGTGGGGC 59.382 55.000 18.57 0.00 34.60 5.80
2417 2422 1.628340 TGTAGTCATTGACAGGTGGGG 59.372 52.381 18.57 0.00 34.60 4.96
2418 2423 2.303022 AGTGTAGTCATTGACAGGTGGG 59.697 50.000 18.57 0.00 34.60 4.61
2419 2424 3.244215 ACAGTGTAGTCATTGACAGGTGG 60.244 47.826 18.57 6.27 35.66 4.61
2420 2425 3.990469 GACAGTGTAGTCATTGACAGGTG 59.010 47.826 18.57 10.32 38.40 4.00
2421 2426 3.641436 TGACAGTGTAGTCATTGACAGGT 59.359 43.478 18.57 7.05 43.18 4.00
2422 2427 4.257267 TGACAGTGTAGTCATTGACAGG 57.743 45.455 18.57 4.21 43.18 4.00
2431 2436 3.854809 GCGAAGAAGATGACAGTGTAGTC 59.145 47.826 0.00 0.00 38.99 2.59
2432 2437 3.255888 TGCGAAGAAGATGACAGTGTAGT 59.744 43.478 0.00 0.00 0.00 2.73
2433 2438 3.838120 TGCGAAGAAGATGACAGTGTAG 58.162 45.455 0.00 0.00 0.00 2.74
2434 2439 3.934457 TGCGAAGAAGATGACAGTGTA 57.066 42.857 0.00 0.00 0.00 2.90
2435 2440 2.820059 TGCGAAGAAGATGACAGTGT 57.180 45.000 0.00 0.00 0.00 3.55
2436 2441 3.519579 AGATGCGAAGAAGATGACAGTG 58.480 45.455 0.00 0.00 0.00 3.66
2437 2442 3.446873 AGAGATGCGAAGAAGATGACAGT 59.553 43.478 0.00 0.00 0.00 3.55
2438 2443 3.797796 CAGAGATGCGAAGAAGATGACAG 59.202 47.826 0.00 0.00 0.00 3.51
2439 2444 3.778618 CAGAGATGCGAAGAAGATGACA 58.221 45.455 0.00 0.00 0.00 3.58
2440 2445 2.539274 GCAGAGATGCGAAGAAGATGAC 59.461 50.000 0.00 0.00 0.00 3.06
2441 2446 2.429971 AGCAGAGATGCGAAGAAGATGA 59.570 45.455 0.00 0.00 40.27 2.92
2442 2447 2.823984 AGCAGAGATGCGAAGAAGATG 58.176 47.619 0.00 0.00 40.27 2.90
2443 2448 3.005684 CCTAGCAGAGATGCGAAGAAGAT 59.994 47.826 7.06 0.00 40.27 2.40
2444 2449 2.360483 CCTAGCAGAGATGCGAAGAAGA 59.640 50.000 7.06 0.00 40.27 2.87
2445 2450 2.545532 CCCTAGCAGAGATGCGAAGAAG 60.546 54.545 7.06 0.00 40.27 2.85
2446 2451 1.410517 CCCTAGCAGAGATGCGAAGAA 59.589 52.381 7.06 0.00 40.27 2.52
2447 2452 1.035923 CCCTAGCAGAGATGCGAAGA 58.964 55.000 7.06 0.00 40.27 2.87
2448 2453 0.033228 CCCCTAGCAGAGATGCGAAG 59.967 60.000 0.00 0.00 40.27 3.79
2449 2454 1.402896 CCCCCTAGCAGAGATGCGAA 61.403 60.000 0.00 0.00 40.27 4.70
2450 2455 1.834378 CCCCCTAGCAGAGATGCGA 60.834 63.158 0.00 0.00 40.27 5.10
2451 2456 2.739784 CCCCCTAGCAGAGATGCG 59.260 66.667 0.00 0.00 40.27 4.73
2452 2457 2.429494 GCCCCCTAGCAGAGATGC 59.571 66.667 0.00 0.00 0.00 3.91
2453 2458 3.976593 TGCCCCCTAGCAGAGATG 58.023 61.111 0.00 0.00 38.00 2.90
2460 2465 1.302832 CGATGGAATGCCCCCTAGC 60.303 63.158 0.00 0.00 0.00 3.42
2461 2466 0.322975 CTCGATGGAATGCCCCCTAG 59.677 60.000 0.00 0.00 0.00 3.02
2462 2467 1.768684 GCTCGATGGAATGCCCCCTA 61.769 60.000 0.00 0.00 0.00 3.53
2463 2468 3.125376 GCTCGATGGAATGCCCCCT 62.125 63.158 0.00 0.00 0.00 4.79
2464 2469 2.595754 GCTCGATGGAATGCCCCC 60.596 66.667 0.00 0.00 0.00 5.40
2465 2470 1.895707 CTGCTCGATGGAATGCCCC 60.896 63.158 0.00 0.00 0.00 5.80
2466 2471 1.895707 CCTGCTCGATGGAATGCCC 60.896 63.158 0.00 0.00 0.00 5.36
2467 2472 0.749454 AACCTGCTCGATGGAATGCC 60.749 55.000 6.30 0.00 0.00 4.40
2468 2473 0.659957 GAACCTGCTCGATGGAATGC 59.340 55.000 6.30 0.00 0.00 3.56
2469 2474 2.322355 AGAACCTGCTCGATGGAATG 57.678 50.000 6.30 0.00 0.00 2.67
2470 2475 2.366916 CCTAGAACCTGCTCGATGGAAT 59.633 50.000 6.30 0.00 0.00 3.01
2471 2476 1.757118 CCTAGAACCTGCTCGATGGAA 59.243 52.381 6.30 0.00 0.00 3.53
2472 2477 1.403814 CCTAGAACCTGCTCGATGGA 58.596 55.000 6.30 0.00 0.00 3.41
2473 2478 0.249657 GCCTAGAACCTGCTCGATGG 60.250 60.000 0.00 0.00 0.00 3.51
2474 2479 0.596083 CGCCTAGAACCTGCTCGATG 60.596 60.000 0.00 0.00 0.00 3.84
2475 2480 1.736586 CGCCTAGAACCTGCTCGAT 59.263 57.895 0.00 0.00 0.00 3.59
2476 2481 2.415608 CCGCCTAGAACCTGCTCGA 61.416 63.158 0.00 0.00 0.00 4.04
2477 2482 2.105128 CCGCCTAGAACCTGCTCG 59.895 66.667 0.00 0.00 0.00 5.03
2478 2483 2.202946 GCCGCCTAGAACCTGCTC 60.203 66.667 0.00 0.00 0.00 4.26
2479 2484 3.787001 GGCCGCCTAGAACCTGCT 61.787 66.667 0.71 0.00 0.00 4.24
2481 2486 4.530857 CCGGCCGCCTAGAACCTG 62.531 72.222 22.85 0.00 0.00 4.00
2482 2487 4.772231 TCCGGCCGCCTAGAACCT 62.772 66.667 22.85 0.00 0.00 3.50
2483 2488 1.751349 TAATCCGGCCGCCTAGAACC 61.751 60.000 22.85 0.00 0.00 3.62
2484 2489 0.599466 GTAATCCGGCCGCCTAGAAC 60.599 60.000 22.85 8.74 0.00 3.01
2485 2490 1.744014 GTAATCCGGCCGCCTAGAA 59.256 57.895 22.85 0.00 0.00 2.10
2486 2491 2.558286 CGTAATCCGGCCGCCTAGA 61.558 63.158 22.85 12.59 0.00 2.43
2487 2492 2.049433 CGTAATCCGGCCGCCTAG 60.049 66.667 22.85 6.13 0.00 3.02
2488 2493 2.834505 ACGTAATCCGGCCGCCTA 60.835 61.111 22.85 7.71 42.24 3.93
2489 2494 4.217159 GACGTAATCCGGCCGCCT 62.217 66.667 22.85 8.50 39.28 5.52
2495 2500 2.960129 GCCGCAGACGTAATCCGG 60.960 66.667 10.83 10.83 42.24 5.14
2496 2501 3.320078 CGCCGCAGACGTAATCCG 61.320 66.667 0.00 0.00 44.03 4.18
2497 2502 1.808390 AACGCCGCAGACGTAATCC 60.808 57.895 0.00 0.00 44.30 3.01
2498 2503 1.343821 CAACGCCGCAGACGTAATC 59.656 57.895 0.00 0.00 44.30 1.75
2499 2504 1.373748 ACAACGCCGCAGACGTAAT 60.374 52.632 0.00 0.00 44.30 1.89
2500 2505 2.027897 ACAACGCCGCAGACGTAA 59.972 55.556 0.00 0.00 44.30 3.18
2501 2506 2.731721 CACAACGCCGCAGACGTA 60.732 61.111 0.00 0.00 44.30 3.57
2511 2516 3.357079 CCACCAGAGGCACAACGC 61.357 66.667 0.00 0.00 41.28 4.84
2512 2517 1.669115 CTCCACCAGAGGCACAACG 60.669 63.158 0.00 0.00 39.13 4.10
2513 2518 4.386413 CTCCACCAGAGGCACAAC 57.614 61.111 0.00 0.00 39.13 3.32
2520 2525 4.463879 CAGCGGCCTCCACCAGAG 62.464 72.222 0.00 0.00 42.83 3.35
2525 2530 4.767255 CTCCACAGCGGCCTCCAC 62.767 72.222 0.00 0.00 33.14 4.02
2527 2532 4.154347 CTCTCCACAGCGGCCTCC 62.154 72.222 0.00 0.00 33.14 4.30
2528 2533 4.154347 CCTCTCCACAGCGGCCTC 62.154 72.222 0.00 0.00 33.14 4.70
2529 2534 4.704103 TCCTCTCCACAGCGGCCT 62.704 66.667 0.00 0.00 33.14 5.19
2530 2535 4.154347 CTCCTCTCCACAGCGGCC 62.154 72.222 0.00 0.00 33.14 6.13
2531 2536 4.154347 CCTCCTCTCCACAGCGGC 62.154 72.222 0.00 0.00 33.14 6.53
2532 2537 4.154347 GCCTCCTCTCCACAGCGG 62.154 72.222 0.00 0.00 0.00 5.52
2533 2538 4.504916 CGCCTCCTCTCCACAGCG 62.505 72.222 0.00 0.00 37.39 5.18
2534 2539 4.828925 GCGCCTCCTCTCCACAGC 62.829 72.222 0.00 0.00 0.00 4.40
2535 2540 3.073735 AGCGCCTCCTCTCCACAG 61.074 66.667 2.29 0.00 0.00 3.66
2536 2541 3.071206 GAGCGCCTCCTCTCCACA 61.071 66.667 2.29 0.00 0.00 4.17
2537 2542 4.200283 CGAGCGCCTCCTCTCCAC 62.200 72.222 2.29 0.00 0.00 4.02
2540 2545 3.591835 CTCCGAGCGCCTCCTCTC 61.592 72.222 2.29 0.00 0.00 3.20
2606 2611 4.529219 TCGTGCTAGGCATGGCGG 62.529 66.667 14.30 11.85 44.68 6.13
2607 2612 2.963854 CTCGTGCTAGGCATGGCG 60.964 66.667 14.30 1.32 44.68 5.69
2608 2613 2.590007 CCTCGTGCTAGGCATGGC 60.590 66.667 12.14 12.14 44.68 4.40
2609 2614 1.068753 CTCCTCGTGCTAGGCATGG 59.931 63.158 11.12 7.19 44.68 3.66
2610 2615 1.593750 GCTCCTCGTGCTAGGCATG 60.594 63.158 5.48 5.48 45.79 4.06
2611 2616 2.801631 GGCTCCTCGTGCTAGGCAT 61.802 63.158 0.00 0.00 41.91 4.40
2612 2617 3.461773 GGCTCCTCGTGCTAGGCA 61.462 66.667 0.00 0.00 36.51 4.75
2613 2618 4.577246 CGGCTCCTCGTGCTAGGC 62.577 72.222 0.00 0.00 36.51 3.93
2614 2619 4.577246 GCGGCTCCTCGTGCTAGG 62.577 72.222 0.00 0.00 38.06 3.02
2615 2620 4.914420 CGCGGCTCCTCGTGCTAG 62.914 72.222 0.00 0.00 33.89 3.42
2662 2667 2.659897 CCTCGCGCTAGTCATGGC 60.660 66.667 5.56 0.00 0.00 4.40
2663 2668 1.007964 CTCCTCGCGCTAGTCATGG 60.008 63.158 5.56 0.00 0.00 3.66
2664 2669 1.659954 GCTCCTCGCGCTAGTCATG 60.660 63.158 5.56 0.00 0.00 3.07
2665 2670 2.725008 GCTCCTCGCGCTAGTCAT 59.275 61.111 5.56 0.00 0.00 3.06
2666 2671 3.518998 GGCTCCTCGCGCTAGTCA 61.519 66.667 5.56 0.00 40.44 3.41
2667 2672 4.615834 CGGCTCCTCGCGCTAGTC 62.616 72.222 5.56 0.00 40.44 2.59
2676 2681 3.596066 TTGTGCTCTGCGGCTCCTC 62.596 63.158 0.00 0.00 0.00 3.71
2677 2682 3.182590 TTTGTGCTCTGCGGCTCCT 62.183 57.895 0.00 0.00 0.00 3.69
2678 2683 2.669569 TTTGTGCTCTGCGGCTCC 60.670 61.111 0.00 0.00 0.00 4.70
2679 2684 2.558313 GTTTGTGCTCTGCGGCTC 59.442 61.111 0.00 0.00 0.00 4.70
2680 2685 2.980233 GGTTTGTGCTCTGCGGCT 60.980 61.111 0.00 0.00 0.00 5.52
2681 2686 3.286751 TGGTTTGTGCTCTGCGGC 61.287 61.111 0.00 0.00 0.00 6.53
2682 2687 2.186160 TGTGGTTTGTGCTCTGCGG 61.186 57.895 0.00 0.00 0.00 5.69
2683 2688 1.009675 GTGTGGTTTGTGCTCTGCG 60.010 57.895 0.00 0.00 0.00 5.18
2684 2689 0.029834 CTGTGTGGTTTGTGCTCTGC 59.970 55.000 0.00 0.00 0.00 4.26
2685 2690 0.029834 GCTGTGTGGTTTGTGCTCTG 59.970 55.000 0.00 0.00 0.00 3.35
2686 2691 1.439353 CGCTGTGTGGTTTGTGCTCT 61.439 55.000 0.00 0.00 0.00 4.09
2687 2692 1.009675 CGCTGTGTGGTTTGTGCTC 60.010 57.895 0.00 0.00 0.00 4.26
2688 2693 1.439353 CTCGCTGTGTGGTTTGTGCT 61.439 55.000 0.00 0.00 0.00 4.40
2689 2694 1.009675 CTCGCTGTGTGGTTTGTGC 60.010 57.895 0.00 0.00 0.00 4.57
2690 2695 1.009675 GCTCGCTGTGTGGTTTGTG 60.010 57.895 0.00 0.00 0.00 3.33
2691 2696 2.186826 GGCTCGCTGTGTGGTTTGT 61.187 57.895 0.00 0.00 0.00 2.83
2692 2697 2.121564 CTGGCTCGCTGTGTGGTTTG 62.122 60.000 0.00 0.00 0.00 2.93
2693 2698 1.893808 CTGGCTCGCTGTGTGGTTT 60.894 57.895 0.00 0.00 0.00 3.27
2694 2699 2.281070 CTGGCTCGCTGTGTGGTT 60.281 61.111 0.00 0.00 0.00 3.67
2695 2700 4.996434 GCTGGCTCGCTGTGTGGT 62.996 66.667 0.00 0.00 0.00 4.16
2732 2737 4.427661 GACACGAGCTCTGCGGCT 62.428 66.667 12.85 0.00 46.11 5.52
2733 2738 4.724602 TGACACGAGCTCTGCGGC 62.725 66.667 12.85 2.30 0.00 6.53
2734 2739 2.807045 GTGACACGAGCTCTGCGG 60.807 66.667 12.85 0.00 0.00 5.69
2735 2740 2.050077 TGTGACACGAGCTCTGCG 60.050 61.111 12.85 1.35 0.00 5.18
2736 2741 1.280886 CTGTGTGACACGAGCTCTGC 61.281 60.000 12.85 6.44 37.14 4.26
2737 2742 1.280886 GCTGTGTGACACGAGCTCTG 61.281 60.000 23.37 11.44 37.14 3.35
2738 2743 1.006805 GCTGTGTGACACGAGCTCT 60.007 57.895 23.37 0.00 37.14 4.09
2739 2744 2.368105 CGCTGTGTGACACGAGCTC 61.368 63.158 25.76 2.73 36.83 4.09
2740 2745 2.355126 CGCTGTGTGACACGAGCT 60.355 61.111 25.76 0.00 36.83 4.09
2741 2746 4.064491 GCGCTGTGTGACACGAGC 62.064 66.667 21.83 21.83 37.14 5.03
2742 2747 1.949015 GATGCGCTGTGTGACACGAG 61.949 60.000 9.73 10.46 37.14 4.18
2743 2748 2.021584 GATGCGCTGTGTGACACGA 61.022 57.895 9.73 0.00 37.14 4.35
2744 2749 2.471607 GATGCGCTGTGTGACACG 59.528 61.111 9.73 7.18 37.14 4.49
2745 2750 1.904852 CTGGATGCGCTGTGTGACAC 61.905 60.000 9.14 9.14 34.56 3.67
2746 2751 1.668793 CTGGATGCGCTGTGTGACA 60.669 57.895 9.73 0.00 0.00 3.58
2747 2752 3.031964 GCTGGATGCGCTGTGTGAC 62.032 63.158 9.73 0.00 0.00 3.67
2748 2753 2.743538 GCTGGATGCGCTGTGTGA 60.744 61.111 9.73 0.00 0.00 3.58
2749 2754 3.807538 GGCTGGATGCGCTGTGTG 61.808 66.667 9.73 0.00 44.05 3.82
2781 2786 4.329545 TTGGTGGCGTGGCTCCTC 62.330 66.667 14.45 0.00 0.00 3.71
2782 2787 4.643387 GTTGGTGGCGTGGCTCCT 62.643 66.667 14.45 0.00 0.00 3.69
2819 2824 4.767255 CCTCGCTGCCACACCTCC 62.767 72.222 0.00 0.00 0.00 4.30
2820 2825 3.655810 CTCCTCGCTGCCACACCTC 62.656 68.421 0.00 0.00 0.00 3.85
2821 2826 3.699894 CTCCTCGCTGCCACACCT 61.700 66.667 0.00 0.00 0.00 4.00
2823 2828 4.687215 TGCTCCTCGCTGCCACAC 62.687 66.667 0.00 0.00 40.11 3.82
2824 2829 4.383861 CTGCTCCTCGCTGCCACA 62.384 66.667 0.00 0.00 40.11 4.17
2845 2850 4.367340 TTGATGTGTGCGTGCGCG 62.367 61.111 16.86 16.86 45.51 6.86
2846 2851 2.500369 CTTGATGTGTGCGTGCGC 60.500 61.111 9.85 9.85 42.35 6.09
2847 2852 2.500369 GCTTGATGTGTGCGTGCG 60.500 61.111 0.00 0.00 0.00 5.34
2848 2853 1.441515 CAGCTTGATGTGTGCGTGC 60.442 57.895 0.00 0.00 0.00 5.34
2849 2854 0.110509 GACAGCTTGATGTGTGCGTG 60.111 55.000 0.00 0.00 32.25 5.34
2850 2855 0.532640 TGACAGCTTGATGTGTGCGT 60.533 50.000 0.00 0.00 32.25 5.24
2851 2856 0.110509 GTGACAGCTTGATGTGTGCG 60.111 55.000 0.00 0.00 32.25 5.34
2852 2857 0.110509 CGTGACAGCTTGATGTGTGC 60.111 55.000 0.00 0.00 32.25 4.57
2853 2858 0.514255 CCGTGACAGCTTGATGTGTG 59.486 55.000 0.00 0.00 32.25 3.82
2854 2859 0.106708 ACCGTGACAGCTTGATGTGT 59.893 50.000 0.00 0.00 32.25 3.72
2855 2860 0.792640 GACCGTGACAGCTTGATGTG 59.207 55.000 0.00 0.00 32.25 3.21
2856 2861 0.667487 CGACCGTGACAGCTTGATGT 60.667 55.000 0.00 0.00 35.68 3.06
2857 2862 0.667487 ACGACCGTGACAGCTTGATG 60.667 55.000 0.00 0.00 0.00 3.07
2858 2863 0.388649 GACGACCGTGACAGCTTGAT 60.389 55.000 0.00 0.00 0.00 2.57
2859 2864 1.007734 GACGACCGTGACAGCTTGA 60.008 57.895 0.00 0.00 0.00 3.02
2860 2865 2.365068 CGACGACCGTGACAGCTTG 61.365 63.158 0.00 0.00 0.00 4.01
2861 2866 2.050351 CGACGACCGTGACAGCTT 60.050 61.111 0.00 0.00 0.00 3.74
2862 2867 2.976350 TCGACGACCGTGACAGCT 60.976 61.111 0.00 0.00 39.75 4.24
2863 2868 2.797866 ATGTCGACGACCGTGACAGC 62.798 60.000 24.33 0.00 44.94 4.40
2864 2869 0.793478 GATGTCGACGACCGTGACAG 60.793 60.000 24.33 6.05 44.94 3.51
2865 2870 1.208358 GATGTCGACGACCGTGACA 59.792 57.895 24.33 20.72 45.71 3.58
2866 2871 1.513586 GGATGTCGACGACCGTGAC 60.514 63.158 24.33 10.97 39.75 3.67
2867 2872 2.693762 GGGATGTCGACGACCGTGA 61.694 63.158 24.33 6.87 39.75 4.35
2868 2873 2.202570 GGGATGTCGACGACCGTG 60.203 66.667 24.33 0.00 39.75 4.94
2869 2874 3.807538 CGGGATGTCGACGACCGT 61.808 66.667 26.99 13.56 39.70 4.83
2871 2876 4.867599 GGCGGGATGTCGACGACC 62.868 72.222 24.33 18.47 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.