Multiple sequence alignment - TraesCS5D01G045900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G045900 | chr5D | 100.000 | 3318 | 0 | 0 | 1 | 3318 | 45042691 | 45039374 | 0.000000e+00 | 6128.0 |
1 | TraesCS5D01G045900 | chr5D | 95.918 | 49 | 1 | 1 | 2378 | 2425 | 388860955 | 388861003 | 9.870000e-11 | 78.7 |
2 | TraesCS5D01G045900 | chr2D | 96.013 | 953 | 31 | 6 | 2369 | 3318 | 31013497 | 31012549 | 0.000000e+00 | 1543.0 |
3 | TraesCS5D01G045900 | chr5B | 89.975 | 1197 | 85 | 13 | 1053 | 2244 | 45023899 | 45022733 | 0.000000e+00 | 1513.0 |
4 | TraesCS5D01G045900 | chr5B | 86.439 | 1202 | 121 | 15 | 1113 | 2288 | 45026380 | 45025195 | 0.000000e+00 | 1279.0 |
5 | TraesCS5D01G045900 | chr5B | 87.014 | 1055 | 107 | 12 | 1089 | 2128 | 44891116 | 44892155 | 0.000000e+00 | 1162.0 |
6 | TraesCS5D01G045900 | chr5B | 97.426 | 272 | 6 | 1 | 366 | 637 | 271155268 | 271154998 | 2.330000e-126 | 462.0 |
7 | TraesCS5D01G045900 | chr5B | 91.212 | 330 | 27 | 2 | 1767 | 2096 | 45002606 | 45002279 | 6.530000e-122 | 448.0 |
8 | TraesCS5D01G045900 | chr5B | 88.199 | 161 | 12 | 5 | 804 | 963 | 45024095 | 45023941 | 5.650000e-43 | 185.0 |
9 | TraesCS5D01G045900 | chr5B | 81.910 | 199 | 18 | 11 | 52 | 241 | 271155859 | 271155670 | 5.730000e-33 | 152.0 |
10 | TraesCS5D01G045900 | chr7D | 91.860 | 946 | 67 | 10 | 2378 | 3318 | 147687444 | 147686504 | 0.000000e+00 | 1312.0 |
11 | TraesCS5D01G045900 | chr5A | 96.159 | 807 | 23 | 2 | 1 | 799 | 439846333 | 439845527 | 0.000000e+00 | 1312.0 |
12 | TraesCS5D01G045900 | chr5A | 86.535 | 557 | 41 | 9 | 1045 | 1580 | 35734292 | 35733749 | 1.720000e-162 | 582.0 |
13 | TraesCS5D01G045900 | chr5A | 90.141 | 426 | 34 | 1 | 1742 | 2159 | 35700549 | 35700124 | 6.260000e-152 | 547.0 |
14 | TraesCS5D01G045900 | chr5A | 85.714 | 182 | 15 | 6 | 623 | 795 | 345757590 | 345757411 | 7.310000e-42 | 182.0 |
15 | TraesCS5D01G045900 | chr5A | 97.143 | 70 | 2 | 0 | 1582 | 1651 | 35700943 | 35700874 | 5.810000e-23 | 119.0 |
16 | TraesCS5D01G045900 | chr2A | 95.931 | 811 | 24 | 3 | 1 | 803 | 43669478 | 43670287 | 0.000000e+00 | 1306.0 |
17 | TraesCS5D01G045900 | chr2A | 91.099 | 955 | 53 | 18 | 2382 | 3318 | 47316062 | 47317002 | 0.000000e+00 | 1264.0 |
18 | TraesCS5D01G045900 | chr2A | 91.573 | 178 | 7 | 4 | 626 | 795 | 43663208 | 43663385 | 4.280000e-59 | 239.0 |
19 | TraesCS5D01G045900 | chr2A | 85.185 | 189 | 17 | 7 | 616 | 795 | 762400049 | 762400235 | 2.030000e-42 | 183.0 |
20 | TraesCS5D01G045900 | chr1B | 95.037 | 806 | 30 | 5 | 1 | 798 | 623270208 | 623271011 | 0.000000e+00 | 1258.0 |
21 | TraesCS5D01G045900 | chr1B | 90.055 | 181 | 10 | 2 | 623 | 795 | 623242671 | 623242851 | 9.260000e-56 | 228.0 |
22 | TraesCS5D01G045900 | chr1B | 95.918 | 49 | 1 | 1 | 2378 | 2425 | 481324978 | 481325026 | 9.870000e-11 | 78.7 |
23 | TraesCS5D01G045900 | chr1B | 92.157 | 51 | 2 | 2 | 2379 | 2427 | 32992227 | 32992177 | 1.650000e-08 | 71.3 |
24 | TraesCS5D01G045900 | chr4D | 90.093 | 969 | 58 | 24 | 2378 | 3318 | 234705180 | 234706138 | 0.000000e+00 | 1223.0 |
25 | TraesCS5D01G045900 | chr6B | 95.956 | 272 | 11 | 0 | 366 | 637 | 342808008 | 342808279 | 3.040000e-120 | 442.0 |
26 | TraesCS5D01G045900 | chr6B | 91.071 | 56 | 3 | 2 | 2371 | 2425 | 162605372 | 162605318 | 1.280000e-09 | 75.0 |
27 | TraesCS5D01G045900 | chrUn | 81.628 | 430 | 65 | 11 | 2814 | 3232 | 134381839 | 134382265 | 8.810000e-91 | 344.0 |
28 | TraesCS5D01G045900 | chr7A | 80.886 | 429 | 64 | 12 | 2814 | 3232 | 470919701 | 470920121 | 4.130000e-84 | 322.0 |
29 | TraesCS5D01G045900 | chr7A | 78.937 | 508 | 69 | 22 | 2733 | 3234 | 598329257 | 598329732 | 8.940000e-81 | 311.0 |
30 | TraesCS5D01G045900 | chr4A | 78.917 | 517 | 74 | 21 | 2720 | 3232 | 532840228 | 532840713 | 5.340000e-83 | 318.0 |
31 | TraesCS5D01G045900 | chr4A | 81.991 | 211 | 19 | 12 | 599 | 796 | 690237096 | 690237300 | 9.530000e-36 | 161.0 |
32 | TraesCS5D01G045900 | chr1D | 78.351 | 485 | 77 | 21 | 2810 | 3274 | 192574202 | 192573726 | 4.190000e-74 | 289.0 |
33 | TraesCS5D01G045900 | chr2B | 88.947 | 190 | 12 | 4 | 614 | 795 | 439913200 | 439913388 | 3.330000e-55 | 226.0 |
34 | TraesCS5D01G045900 | chr2B | 89.326 | 178 | 10 | 5 | 626 | 795 | 439894513 | 439894689 | 7.210000e-52 | 215.0 |
35 | TraesCS5D01G045900 | chr2B | 85.641 | 195 | 16 | 6 | 610 | 795 | 563618831 | 563618640 | 9.390000e-46 | 195.0 |
36 | TraesCS5D01G045900 | chr4B | 87.179 | 156 | 11 | 5 | 649 | 795 | 86708806 | 86708961 | 5.690000e-38 | 169.0 |
37 | TraesCS5D01G045900 | chr3B | 81.132 | 212 | 24 | 10 | 599 | 798 | 825991296 | 825991503 | 4.430000e-34 | 156.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5D01G045900 | chr5D | 45039374 | 45042691 | 3317 | True | 6128.000000 | 6128 | 100.000000 | 1 | 3318 | 1 | chr5D.!!$R1 | 3317 |
1 | TraesCS5D01G045900 | chr2D | 31012549 | 31013497 | 948 | True | 1543.000000 | 1543 | 96.013000 | 2369 | 3318 | 1 | chr2D.!!$R1 | 949 |
2 | TraesCS5D01G045900 | chr5B | 44891116 | 44892155 | 1039 | False | 1162.000000 | 1162 | 87.014000 | 1089 | 2128 | 1 | chr5B.!!$F1 | 1039 |
3 | TraesCS5D01G045900 | chr5B | 45022733 | 45026380 | 3647 | True | 992.333333 | 1513 | 88.204333 | 804 | 2288 | 3 | chr5B.!!$R2 | 1484 |
4 | TraesCS5D01G045900 | chr5B | 271154998 | 271155859 | 861 | True | 307.000000 | 462 | 89.668000 | 52 | 637 | 2 | chr5B.!!$R3 | 585 |
5 | TraesCS5D01G045900 | chr7D | 147686504 | 147687444 | 940 | True | 1312.000000 | 1312 | 91.860000 | 2378 | 3318 | 1 | chr7D.!!$R1 | 940 |
6 | TraesCS5D01G045900 | chr5A | 439845527 | 439846333 | 806 | True | 1312.000000 | 1312 | 96.159000 | 1 | 799 | 1 | chr5A.!!$R3 | 798 |
7 | TraesCS5D01G045900 | chr5A | 35733749 | 35734292 | 543 | True | 582.000000 | 582 | 86.535000 | 1045 | 1580 | 1 | chr5A.!!$R1 | 535 |
8 | TraesCS5D01G045900 | chr5A | 35700124 | 35700943 | 819 | True | 333.000000 | 547 | 93.642000 | 1582 | 2159 | 2 | chr5A.!!$R4 | 577 |
9 | TraesCS5D01G045900 | chr2A | 43669478 | 43670287 | 809 | False | 1306.000000 | 1306 | 95.931000 | 1 | 803 | 1 | chr2A.!!$F2 | 802 |
10 | TraesCS5D01G045900 | chr2A | 47316062 | 47317002 | 940 | False | 1264.000000 | 1264 | 91.099000 | 2382 | 3318 | 1 | chr2A.!!$F3 | 936 |
11 | TraesCS5D01G045900 | chr1B | 623270208 | 623271011 | 803 | False | 1258.000000 | 1258 | 95.037000 | 1 | 798 | 1 | chr1B.!!$F3 | 797 |
12 | TraesCS5D01G045900 | chr4D | 234705180 | 234706138 | 958 | False | 1223.000000 | 1223 | 90.093000 | 2378 | 3318 | 1 | chr4D.!!$F1 | 940 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
969 | 1262 | 0.102481 | CGTATGCCTCCTAACACGCT | 59.898 | 55.0 | 0.00 | 0.00 | 0.00 | 5.07 | F |
1019 | 1312 | 0.104304 | ACCTTCGAAGACGTGCTTGT | 59.896 | 50.0 | 26.61 | 9.97 | 36.83 | 3.16 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2071 | 5154 | 0.253044 | AGCATCCACACCGCATTACT | 59.747 | 50.0 | 0.0 | 0.0 | 0.0 | 2.24 | R |
2594 | 5688 | 0.690762 | ACCACCGTACAATGAAGCCT | 59.309 | 50.0 | 0.0 | 0.0 | 0.0 | 4.58 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
243 | 251 | 2.202349 | GTCGCGTTTGCTGCCATC | 60.202 | 61.111 | 5.77 | 0.00 | 39.65 | 3.51 |
330 | 490 | 2.125753 | GCTGTGTCGCCTGAGAGG | 60.126 | 66.667 | 0.00 | 0.00 | 38.80 | 3.69 |
726 | 1011 | 5.418840 | CCCTCATTACAAGGCAGTTACAAAT | 59.581 | 40.000 | 0.00 | 0.00 | 32.15 | 2.32 |
727 | 1012 | 6.404734 | CCCTCATTACAAGGCAGTTACAAATC | 60.405 | 42.308 | 0.00 | 0.00 | 32.15 | 2.17 |
729 | 1014 | 6.908825 | TCATTACAAGGCAGTTACAAATCAC | 58.091 | 36.000 | 0.00 | 0.00 | 0.00 | 3.06 |
730 | 1015 | 6.714810 | TCATTACAAGGCAGTTACAAATCACT | 59.285 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
732 | 1017 | 4.718961 | ACAAGGCAGTTACAAATCACTCT | 58.281 | 39.130 | 0.00 | 0.00 | 0.00 | 3.24 |
733 | 1018 | 4.757149 | ACAAGGCAGTTACAAATCACTCTC | 59.243 | 41.667 | 0.00 | 0.00 | 0.00 | 3.20 |
735 | 1020 | 4.573900 | AGGCAGTTACAAATCACTCTCTG | 58.426 | 43.478 | 0.00 | 0.00 | 0.00 | 3.35 |
810 | 1103 | 9.603921 | AATTCCTAACAATATTGATGCAAAAGG | 57.396 | 29.630 | 22.16 | 12.69 | 0.00 | 3.11 |
811 | 1104 | 6.572519 | TCCTAACAATATTGATGCAAAAGGC | 58.427 | 36.000 | 22.16 | 0.00 | 45.13 | 4.35 |
823 | 1116 | 3.764885 | GCAAAAGGCACACTACTATGG | 57.235 | 47.619 | 0.00 | 0.00 | 43.97 | 2.74 |
824 | 1117 | 3.343617 | GCAAAAGGCACACTACTATGGA | 58.656 | 45.455 | 0.00 | 0.00 | 43.97 | 3.41 |
825 | 1118 | 3.756434 | GCAAAAGGCACACTACTATGGAA | 59.244 | 43.478 | 0.00 | 0.00 | 43.97 | 3.53 |
826 | 1119 | 4.217550 | GCAAAAGGCACACTACTATGGAAA | 59.782 | 41.667 | 0.00 | 0.00 | 43.97 | 3.13 |
827 | 1120 | 5.278758 | GCAAAAGGCACACTACTATGGAAAA | 60.279 | 40.000 | 0.00 | 0.00 | 43.97 | 2.29 |
828 | 1121 | 5.959618 | AAAGGCACACTACTATGGAAAAC | 57.040 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
829 | 1122 | 4.634012 | AGGCACACTACTATGGAAAACA | 57.366 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
830 | 1123 | 5.179452 | AGGCACACTACTATGGAAAACAT | 57.821 | 39.130 | 0.00 | 0.00 | 43.68 | 2.71 |
831 | 1124 | 4.943705 | AGGCACACTACTATGGAAAACATG | 59.056 | 41.667 | 0.00 | 0.00 | 40.82 | 3.21 |
832 | 1125 | 4.438744 | GGCACACTACTATGGAAAACATGC | 60.439 | 45.833 | 0.00 | 0.00 | 40.82 | 4.06 |
833 | 1126 | 4.396166 | GCACACTACTATGGAAAACATGCT | 59.604 | 41.667 | 0.00 | 0.00 | 40.82 | 3.79 |
834 | 1127 | 5.106157 | GCACACTACTATGGAAAACATGCTT | 60.106 | 40.000 | 0.00 | 0.00 | 40.82 | 3.91 |
835 | 1128 | 6.570378 | GCACACTACTATGGAAAACATGCTTT | 60.570 | 38.462 | 0.00 | 0.00 | 40.82 | 3.51 |
836 | 1129 | 7.370383 | CACACTACTATGGAAAACATGCTTTT | 58.630 | 34.615 | 0.00 | 1.12 | 40.82 | 2.27 |
837 | 1130 | 7.326789 | CACACTACTATGGAAAACATGCTTTTG | 59.673 | 37.037 | 9.70 | 0.00 | 40.82 | 2.44 |
838 | 1131 | 7.230510 | ACACTACTATGGAAAACATGCTTTTGA | 59.769 | 33.333 | 9.70 | 0.00 | 40.82 | 2.69 |
839 | 1132 | 8.081633 | CACTACTATGGAAAACATGCTTTTGAA | 58.918 | 33.333 | 9.70 | 1.27 | 40.82 | 2.69 |
840 | 1133 | 8.637986 | ACTACTATGGAAAACATGCTTTTGAAA | 58.362 | 29.630 | 9.70 | 0.00 | 40.82 | 2.69 |
841 | 1134 | 9.643693 | CTACTATGGAAAACATGCTTTTGAAAT | 57.356 | 29.630 | 9.70 | 5.00 | 40.82 | 2.17 |
842 | 1135 | 8.538409 | ACTATGGAAAACATGCTTTTGAAATC | 57.462 | 30.769 | 9.70 | 0.00 | 40.82 | 2.17 |
843 | 1136 | 6.806388 | ATGGAAAACATGCTTTTGAAATCC | 57.194 | 33.333 | 9.70 | 6.27 | 38.70 | 3.01 |
844 | 1137 | 5.678583 | TGGAAAACATGCTTTTGAAATCCA | 58.321 | 33.333 | 9.70 | 8.13 | 0.00 | 3.41 |
845 | 1138 | 5.526846 | TGGAAAACATGCTTTTGAAATCCAC | 59.473 | 36.000 | 9.70 | 0.00 | 0.00 | 4.02 |
846 | 1139 | 5.759763 | GGAAAACATGCTTTTGAAATCCACT | 59.240 | 36.000 | 9.70 | 0.00 | 0.00 | 4.00 |
847 | 1140 | 6.928492 | GGAAAACATGCTTTTGAAATCCACTA | 59.072 | 34.615 | 9.70 | 0.00 | 0.00 | 2.74 |
848 | 1141 | 7.603784 | GGAAAACATGCTTTTGAAATCCACTAT | 59.396 | 33.333 | 9.70 | 0.00 | 0.00 | 2.12 |
849 | 1142 | 8.538409 | AAAACATGCTTTTGAAATCCACTATC | 57.462 | 30.769 | 0.00 | 0.00 | 0.00 | 2.08 |
850 | 1143 | 7.472334 | AACATGCTTTTGAAATCCACTATCT | 57.528 | 32.000 | 0.00 | 0.00 | 0.00 | 1.98 |
851 | 1144 | 8.579850 | AACATGCTTTTGAAATCCACTATCTA | 57.420 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
852 | 1145 | 8.757982 | ACATGCTTTTGAAATCCACTATCTAT | 57.242 | 30.769 | 0.00 | 0.00 | 0.00 | 1.98 |
853 | 1146 | 8.844244 | ACATGCTTTTGAAATCCACTATCTATC | 58.156 | 33.333 | 0.00 | 0.00 | 0.00 | 2.08 |
854 | 1147 | 7.482654 | TGCTTTTGAAATCCACTATCTATCG | 57.517 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
855 | 1148 | 6.483307 | TGCTTTTGAAATCCACTATCTATCGG | 59.517 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
856 | 1149 | 6.566753 | GCTTTTGAAATCCACTATCTATCGGC | 60.567 | 42.308 | 0.00 | 0.00 | 0.00 | 5.54 |
857 | 1150 | 5.808366 | TTGAAATCCACTATCTATCGGCT | 57.192 | 39.130 | 0.00 | 0.00 | 0.00 | 5.52 |
858 | 1151 | 6.911250 | TTGAAATCCACTATCTATCGGCTA | 57.089 | 37.500 | 0.00 | 0.00 | 0.00 | 3.93 |
859 | 1152 | 6.268825 | TGAAATCCACTATCTATCGGCTAC | 57.731 | 41.667 | 0.00 | 0.00 | 0.00 | 3.58 |
860 | 1153 | 5.185249 | TGAAATCCACTATCTATCGGCTACC | 59.815 | 44.000 | 0.00 | 0.00 | 0.00 | 3.18 |
861 | 1154 | 4.594675 | ATCCACTATCTATCGGCTACCT | 57.405 | 45.455 | 0.00 | 0.00 | 0.00 | 3.08 |
862 | 1155 | 3.687125 | TCCACTATCTATCGGCTACCTG | 58.313 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
863 | 1156 | 2.755655 | CCACTATCTATCGGCTACCTGG | 59.244 | 54.545 | 0.00 | 0.00 | 0.00 | 4.45 |
864 | 1157 | 2.164624 | CACTATCTATCGGCTACCTGGC | 59.835 | 54.545 | 0.00 | 0.00 | 37.94 | 4.85 |
871 | 1164 | 4.301027 | GGCTACCTGGCCGGATCG | 62.301 | 72.222 | 15.09 | 0.00 | 42.82 | 3.69 |
872 | 1165 | 3.537874 | GCTACCTGGCCGGATCGT | 61.538 | 66.667 | 15.09 | 5.01 | 36.31 | 3.73 |
873 | 1166 | 2.198287 | GCTACCTGGCCGGATCGTA | 61.198 | 63.158 | 15.09 | 6.05 | 36.31 | 3.43 |
874 | 1167 | 1.741327 | GCTACCTGGCCGGATCGTAA | 61.741 | 60.000 | 15.09 | 0.00 | 36.31 | 3.18 |
875 | 1168 | 0.748450 | CTACCTGGCCGGATCGTAAA | 59.252 | 55.000 | 15.09 | 0.00 | 36.31 | 2.01 |
876 | 1169 | 1.137479 | CTACCTGGCCGGATCGTAAAA | 59.863 | 52.381 | 15.09 | 0.00 | 36.31 | 1.52 |
877 | 1170 | 0.325602 | ACCTGGCCGGATCGTAAAAA | 59.674 | 50.000 | 15.09 | 0.00 | 36.31 | 1.94 |
878 | 1171 | 0.730840 | CCTGGCCGGATCGTAAAAAC | 59.269 | 55.000 | 15.09 | 0.00 | 33.16 | 2.43 |
879 | 1172 | 1.444836 | CTGGCCGGATCGTAAAAACA | 58.555 | 50.000 | 5.28 | 0.00 | 0.00 | 2.83 |
880 | 1173 | 1.807742 | CTGGCCGGATCGTAAAAACAA | 59.192 | 47.619 | 5.28 | 0.00 | 0.00 | 2.83 |
881 | 1174 | 1.807742 | TGGCCGGATCGTAAAAACAAG | 59.192 | 47.619 | 5.05 | 0.00 | 0.00 | 3.16 |
882 | 1175 | 1.131693 | GGCCGGATCGTAAAAACAAGG | 59.868 | 52.381 | 5.05 | 0.00 | 0.00 | 3.61 |
883 | 1176 | 1.466866 | GCCGGATCGTAAAAACAAGGC | 60.467 | 52.381 | 5.05 | 0.00 | 35.00 | 4.35 |
884 | 1177 | 2.081462 | CCGGATCGTAAAAACAAGGCT | 58.919 | 47.619 | 0.00 | 0.00 | 0.00 | 4.58 |
885 | 1178 | 2.095372 | CCGGATCGTAAAAACAAGGCTC | 59.905 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
886 | 1179 | 3.000727 | CGGATCGTAAAAACAAGGCTCT | 58.999 | 45.455 | 0.00 | 0.00 | 0.00 | 4.09 |
887 | 1180 | 3.181520 | CGGATCGTAAAAACAAGGCTCTG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 3.35 |
888 | 1181 | 3.426292 | GGATCGTAAAAACAAGGCTCTGC | 60.426 | 47.826 | 0.00 | 0.00 | 0.00 | 4.26 |
889 | 1182 | 2.566913 | TCGTAAAAACAAGGCTCTGCA | 58.433 | 42.857 | 0.00 | 0.00 | 0.00 | 4.41 |
890 | 1183 | 2.289547 | TCGTAAAAACAAGGCTCTGCAC | 59.710 | 45.455 | 0.00 | 0.00 | 0.00 | 4.57 |
891 | 1184 | 2.650608 | GTAAAAACAAGGCTCTGCACG | 58.349 | 47.619 | 0.00 | 0.00 | 0.00 | 5.34 |
892 | 1185 | 1.388547 | AAAAACAAGGCTCTGCACGA | 58.611 | 45.000 | 0.00 | 0.00 | 0.00 | 4.35 |
893 | 1186 | 0.663153 | AAAACAAGGCTCTGCACGAC | 59.337 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
894 | 1187 | 0.179045 | AAACAAGGCTCTGCACGACT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
895 | 1188 | 0.601311 | AACAAGGCTCTGCACGACTC | 60.601 | 55.000 | 0.00 | 0.00 | 0.00 | 3.36 |
896 | 1189 | 1.739562 | CAAGGCTCTGCACGACTCC | 60.740 | 63.158 | 0.00 | 0.00 | 0.00 | 3.85 |
897 | 1190 | 3.288308 | AAGGCTCTGCACGACTCCG | 62.288 | 63.158 | 0.00 | 0.00 | 42.50 | 4.63 |
898 | 1191 | 3.749064 | GGCTCTGCACGACTCCGA | 61.749 | 66.667 | 0.00 | 0.00 | 39.50 | 4.55 |
899 | 1192 | 2.492090 | GCTCTGCACGACTCCGAT | 59.508 | 61.111 | 0.00 | 0.00 | 39.50 | 4.18 |
900 | 1193 | 1.587613 | GCTCTGCACGACTCCGATC | 60.588 | 63.158 | 0.00 | 0.00 | 39.50 | 3.69 |
908 | 1201 | 3.078804 | CGACTCCGATCGTATGCAG | 57.921 | 57.895 | 15.09 | 4.25 | 37.33 | 4.41 |
909 | 1202 | 0.586802 | CGACTCCGATCGTATGCAGA | 59.413 | 55.000 | 15.09 | 1.74 | 37.33 | 4.26 |
910 | 1203 | 1.399087 | CGACTCCGATCGTATGCAGAG | 60.399 | 57.143 | 15.09 | 13.95 | 37.33 | 3.35 |
911 | 1204 | 0.955178 | ACTCCGATCGTATGCAGAGG | 59.045 | 55.000 | 15.09 | 0.00 | 0.00 | 3.69 |
912 | 1205 | 1.239347 | CTCCGATCGTATGCAGAGGA | 58.761 | 55.000 | 15.09 | 6.15 | 0.00 | 3.71 |
913 | 1206 | 1.198867 | CTCCGATCGTATGCAGAGGAG | 59.801 | 57.143 | 15.09 | 4.65 | 37.95 | 3.69 |
914 | 1207 | 0.242286 | CCGATCGTATGCAGAGGAGG | 59.758 | 60.000 | 15.09 | 2.67 | 0.00 | 4.30 |
915 | 1208 | 0.242286 | CGATCGTATGCAGAGGAGGG | 59.758 | 60.000 | 7.03 | 0.34 | 0.00 | 4.30 |
916 | 1209 | 1.621992 | GATCGTATGCAGAGGAGGGA | 58.378 | 55.000 | 9.79 | 0.00 | 0.00 | 4.20 |
917 | 1210 | 2.175202 | GATCGTATGCAGAGGAGGGAT | 58.825 | 52.381 | 9.79 | 0.00 | 0.00 | 3.85 |
918 | 1211 | 2.088104 | TCGTATGCAGAGGAGGGATT | 57.912 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
919 | 1212 | 1.964223 | TCGTATGCAGAGGAGGGATTC | 59.036 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
920 | 1213 | 1.336332 | CGTATGCAGAGGAGGGATTCG | 60.336 | 57.143 | 0.00 | 0.00 | 0.00 | 3.34 |
921 | 1214 | 1.964223 | GTATGCAGAGGAGGGATTCGA | 59.036 | 52.381 | 0.00 | 0.00 | 0.00 | 3.71 |
922 | 1215 | 1.047002 | ATGCAGAGGAGGGATTCGAG | 58.953 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
923 | 1216 | 0.324738 | TGCAGAGGAGGGATTCGAGT | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
924 | 1217 | 0.387565 | GCAGAGGAGGGATTCGAGTC | 59.612 | 60.000 | 0.00 | 0.00 | 0.00 | 3.36 |
925 | 1218 | 0.665835 | CAGAGGAGGGATTCGAGTCG | 59.334 | 60.000 | 6.09 | 6.09 | 0.00 | 4.18 |
926 | 1219 | 0.466555 | AGAGGAGGGATTCGAGTCGG | 60.467 | 60.000 | 13.54 | 0.00 | 0.00 | 4.79 |
927 | 1220 | 1.455959 | AGGAGGGATTCGAGTCGGG | 60.456 | 63.158 | 13.54 | 0.00 | 0.00 | 5.14 |
928 | 1221 | 2.499827 | GGAGGGATTCGAGTCGGGG | 61.500 | 68.421 | 13.54 | 0.00 | 0.00 | 5.73 |
929 | 1222 | 1.757340 | GAGGGATTCGAGTCGGGGT | 60.757 | 63.158 | 13.54 | 0.00 | 0.00 | 4.95 |
930 | 1223 | 1.736365 | GAGGGATTCGAGTCGGGGTC | 61.736 | 65.000 | 13.54 | 8.28 | 0.00 | 4.46 |
931 | 1224 | 2.794028 | GGGATTCGAGTCGGGGTCC | 61.794 | 68.421 | 13.54 | 16.20 | 0.00 | 4.46 |
932 | 1225 | 2.056223 | GGATTCGAGTCGGGGTCCA | 61.056 | 63.158 | 13.54 | 0.00 | 0.00 | 4.02 |
933 | 1226 | 1.610554 | GGATTCGAGTCGGGGTCCAA | 61.611 | 60.000 | 13.54 | 0.00 | 0.00 | 3.53 |
934 | 1227 | 0.459759 | GATTCGAGTCGGGGTCCAAC | 60.460 | 60.000 | 13.54 | 0.00 | 0.00 | 3.77 |
935 | 1228 | 1.189524 | ATTCGAGTCGGGGTCCAACA | 61.190 | 55.000 | 13.54 | 0.00 | 0.00 | 3.33 |
936 | 1229 | 2.048503 | CGAGTCGGGGTCCAACAC | 60.049 | 66.667 | 4.10 | 0.00 | 0.00 | 3.32 |
937 | 1230 | 2.048503 | GAGTCGGGGTCCAACACG | 60.049 | 66.667 | 0.00 | 0.00 | 0.00 | 4.49 |
938 | 1231 | 2.841044 | AGTCGGGGTCCAACACGT | 60.841 | 61.111 | 0.00 | 0.00 | 0.00 | 4.49 |
939 | 1232 | 1.526575 | GAGTCGGGGTCCAACACGTA | 61.527 | 60.000 | 0.00 | 0.00 | 0.00 | 3.57 |
940 | 1233 | 1.373371 | GTCGGGGTCCAACACGTAC | 60.373 | 63.158 | 0.00 | 0.00 | 0.00 | 3.67 |
941 | 1234 | 2.431260 | CGGGGTCCAACACGTACG | 60.431 | 66.667 | 15.01 | 15.01 | 0.00 | 3.67 |
942 | 1235 | 2.736531 | GGGGTCCAACACGTACGT | 59.263 | 61.111 | 16.72 | 16.72 | 0.00 | 3.57 |
943 | 1236 | 1.373371 | GGGGTCCAACACGTACGTC | 60.373 | 63.158 | 19.94 | 5.92 | 0.00 | 4.34 |
944 | 1237 | 1.373371 | GGGTCCAACACGTACGTCC | 60.373 | 63.158 | 19.94 | 15.23 | 0.00 | 4.79 |
945 | 1238 | 1.730547 | GGTCCAACACGTACGTCCG | 60.731 | 63.158 | 19.94 | 11.26 | 0.00 | 4.79 |
946 | 1239 | 1.730547 | GTCCAACACGTACGTCCGG | 60.731 | 63.158 | 19.94 | 18.28 | 0.00 | 5.14 |
947 | 1240 | 2.431260 | CCAACACGTACGTCCGGG | 60.431 | 66.667 | 19.94 | 15.53 | 37.25 | 5.73 |
948 | 1241 | 3.107661 | CAACACGTACGTCCGGGC | 61.108 | 66.667 | 19.94 | 0.00 | 33.59 | 6.13 |
949 | 1242 | 3.604667 | AACACGTACGTCCGGGCA | 61.605 | 61.111 | 19.94 | 0.00 | 33.59 | 5.36 |
950 | 1243 | 3.846602 | AACACGTACGTCCGGGCAC | 62.847 | 63.158 | 19.94 | 0.00 | 33.59 | 5.01 |
965 | 1258 | 3.752796 | GCACGTATGCCTCCTAACA | 57.247 | 52.632 | 0.00 | 0.00 | 46.97 | 2.41 |
966 | 1259 | 1.287425 | GCACGTATGCCTCCTAACAC | 58.713 | 55.000 | 0.00 | 0.00 | 46.97 | 3.32 |
967 | 1260 | 1.556564 | CACGTATGCCTCCTAACACG | 58.443 | 55.000 | 0.00 | 0.00 | 35.62 | 4.49 |
968 | 1261 | 0.179119 | ACGTATGCCTCCTAACACGC | 60.179 | 55.000 | 0.00 | 0.00 | 32.90 | 5.34 |
969 | 1262 | 0.102481 | CGTATGCCTCCTAACACGCT | 59.898 | 55.000 | 0.00 | 0.00 | 0.00 | 5.07 |
970 | 1263 | 1.470979 | CGTATGCCTCCTAACACGCTT | 60.471 | 52.381 | 0.00 | 0.00 | 0.00 | 4.68 |
971 | 1264 | 2.223641 | CGTATGCCTCCTAACACGCTTA | 60.224 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
972 | 1265 | 3.552273 | CGTATGCCTCCTAACACGCTTAT | 60.552 | 47.826 | 0.00 | 0.00 | 0.00 | 1.73 |
973 | 1266 | 3.560636 | ATGCCTCCTAACACGCTTATT | 57.439 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
974 | 1267 | 3.343941 | TGCCTCCTAACACGCTTATTT | 57.656 | 42.857 | 0.00 | 0.00 | 0.00 | 1.40 |
975 | 1268 | 4.475051 | TGCCTCCTAACACGCTTATTTA | 57.525 | 40.909 | 0.00 | 0.00 | 0.00 | 1.40 |
976 | 1269 | 4.834534 | TGCCTCCTAACACGCTTATTTAA | 58.165 | 39.130 | 0.00 | 0.00 | 0.00 | 1.52 |
977 | 1270 | 4.873827 | TGCCTCCTAACACGCTTATTTAAG | 59.126 | 41.667 | 0.00 | 0.00 | 36.40 | 1.85 |
978 | 1271 | 5.114081 | GCCTCCTAACACGCTTATTTAAGA | 58.886 | 41.667 | 1.52 | 0.00 | 35.33 | 2.10 |
979 | 1272 | 5.006455 | GCCTCCTAACACGCTTATTTAAGAC | 59.994 | 44.000 | 1.52 | 0.00 | 35.33 | 3.01 |
980 | 1273 | 5.522824 | CCTCCTAACACGCTTATTTAAGACC | 59.477 | 44.000 | 1.52 | 0.00 | 35.33 | 3.85 |
981 | 1274 | 6.040209 | TCCTAACACGCTTATTTAAGACCA | 57.960 | 37.500 | 1.52 | 0.00 | 35.33 | 4.02 |
982 | 1275 | 6.465948 | TCCTAACACGCTTATTTAAGACCAA | 58.534 | 36.000 | 1.52 | 0.00 | 35.33 | 3.67 |
983 | 1276 | 6.935771 | TCCTAACACGCTTATTTAAGACCAAA | 59.064 | 34.615 | 1.52 | 0.00 | 35.33 | 3.28 |
984 | 1277 | 7.444792 | TCCTAACACGCTTATTTAAGACCAAAA | 59.555 | 33.333 | 1.52 | 0.00 | 35.33 | 2.44 |
985 | 1278 | 8.077386 | CCTAACACGCTTATTTAAGACCAAAAA | 58.923 | 33.333 | 1.52 | 0.00 | 35.33 | 1.94 |
986 | 1279 | 7.924103 | AACACGCTTATTTAAGACCAAAAAG | 57.076 | 32.000 | 1.52 | 0.00 | 35.33 | 2.27 |
987 | 1280 | 5.918576 | ACACGCTTATTTAAGACCAAAAAGC | 59.081 | 36.000 | 1.52 | 0.00 | 35.33 | 3.51 |
988 | 1281 | 5.918011 | CACGCTTATTTAAGACCAAAAAGCA | 59.082 | 36.000 | 1.52 | 0.00 | 34.63 | 3.91 |
989 | 1282 | 5.918576 | ACGCTTATTTAAGACCAAAAAGCAC | 59.081 | 36.000 | 1.52 | 0.00 | 34.63 | 4.40 |
990 | 1283 | 5.059221 | CGCTTATTTAAGACCAAAAAGCACG | 59.941 | 40.000 | 1.52 | 0.00 | 34.63 | 5.34 |
991 | 1284 | 5.164090 | GCTTATTTAAGACCAAAAAGCACGC | 60.164 | 40.000 | 1.52 | 0.00 | 34.83 | 5.34 |
992 | 1285 | 3.784701 | TTTAAGACCAAAAAGCACGCA | 57.215 | 38.095 | 0.00 | 0.00 | 0.00 | 5.24 |
993 | 1286 | 2.766970 | TAAGACCAAAAAGCACGCAC | 57.233 | 45.000 | 0.00 | 0.00 | 0.00 | 5.34 |
994 | 1287 | 0.248458 | AAGACCAAAAAGCACGCACG | 60.248 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
995 | 1288 | 2.278531 | ACCAAAAAGCACGCACGC | 60.279 | 55.556 | 0.00 | 0.00 | 0.00 | 5.34 |
996 | 1289 | 2.278466 | CCAAAAAGCACGCACGCA | 60.278 | 55.556 | 0.00 | 0.00 | 0.00 | 5.24 |
997 | 1290 | 2.576002 | CCAAAAAGCACGCACGCAC | 61.576 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
998 | 1291 | 2.650602 | AAAAAGCACGCACGCACG | 60.651 | 55.556 | 0.00 | 0.00 | 39.50 | 5.34 |
1008 | 1301 | 3.334751 | CACGCACGCACCTTCGAA | 61.335 | 61.111 | 0.00 | 0.00 | 0.00 | 3.71 |
1009 | 1302 | 3.036084 | ACGCACGCACCTTCGAAG | 61.036 | 61.111 | 18.51 | 18.51 | 0.00 | 3.79 |
1010 | 1303 | 2.733218 | CGCACGCACCTTCGAAGA | 60.733 | 61.111 | 26.61 | 0.00 | 0.00 | 2.87 |
1011 | 1304 | 2.853914 | GCACGCACCTTCGAAGAC | 59.146 | 61.111 | 26.61 | 13.77 | 34.32 | 3.01 |
1012 | 1305 | 3.000080 | GCACGCACCTTCGAAGACG | 62.000 | 63.158 | 26.61 | 25.10 | 34.32 | 4.18 |
1013 | 1306 | 1.660575 | CACGCACCTTCGAAGACGT | 60.661 | 57.895 | 26.61 | 25.70 | 40.69 | 4.34 |
1014 | 1307 | 1.660575 | ACGCACCTTCGAAGACGTG | 60.661 | 57.895 | 27.94 | 25.42 | 39.31 | 4.49 |
1016 | 1309 | 4.655527 | CACCTTCGAAGACGTGCT | 57.344 | 55.556 | 26.61 | 0.00 | 40.69 | 4.40 |
1017 | 1310 | 2.900528 | CACCTTCGAAGACGTGCTT | 58.099 | 52.632 | 26.61 | 0.00 | 40.25 | 3.91 |
1018 | 1311 | 0.508641 | CACCTTCGAAGACGTGCTTG | 59.491 | 55.000 | 26.61 | 9.32 | 36.83 | 4.01 |
1019 | 1312 | 0.104304 | ACCTTCGAAGACGTGCTTGT | 59.896 | 50.000 | 26.61 | 9.97 | 36.83 | 3.16 |
1020 | 1313 | 1.217882 | CCTTCGAAGACGTGCTTGTT | 58.782 | 50.000 | 26.61 | 0.00 | 36.83 | 2.83 |
1021 | 1314 | 2.223876 | ACCTTCGAAGACGTGCTTGTTA | 60.224 | 45.455 | 26.61 | 0.00 | 36.83 | 2.41 |
1022 | 1315 | 2.798283 | CCTTCGAAGACGTGCTTGTTAA | 59.202 | 45.455 | 26.61 | 0.00 | 36.83 | 2.01 |
1023 | 1316 | 3.362693 | CCTTCGAAGACGTGCTTGTTAAC | 60.363 | 47.826 | 26.61 | 0.00 | 36.83 | 2.01 |
1024 | 1317 | 3.088194 | TCGAAGACGTGCTTGTTAACT | 57.912 | 42.857 | 7.22 | 0.00 | 36.83 | 2.24 |
1025 | 1318 | 3.047796 | TCGAAGACGTGCTTGTTAACTC | 58.952 | 45.455 | 7.22 | 0.00 | 36.83 | 3.01 |
1026 | 1319 | 2.160143 | CGAAGACGTGCTTGTTAACTCG | 60.160 | 50.000 | 7.22 | 6.65 | 36.83 | 4.18 |
1027 | 1320 | 2.503920 | AGACGTGCTTGTTAACTCGT | 57.496 | 45.000 | 7.22 | 9.49 | 0.00 | 4.18 |
1028 | 1321 | 2.124903 | AGACGTGCTTGTTAACTCGTG | 58.875 | 47.619 | 7.22 | 0.00 | 0.00 | 4.35 |
1029 | 1322 | 0.580104 | ACGTGCTTGTTAACTCGTGC | 59.420 | 50.000 | 7.22 | 6.48 | 0.00 | 5.34 |
1030 | 1323 | 0.579630 | CGTGCTTGTTAACTCGTGCA | 59.420 | 50.000 | 7.22 | 8.84 | 0.00 | 4.57 |
1031 | 1324 | 1.397190 | CGTGCTTGTTAACTCGTGCAG | 60.397 | 52.381 | 7.22 | 3.53 | 0.00 | 4.41 |
1032 | 1325 | 1.864711 | GTGCTTGTTAACTCGTGCAGA | 59.135 | 47.619 | 7.22 | 0.00 | 0.00 | 4.26 |
1041 | 1334 | 4.695560 | TCGTGCAGAGTCGAGAGA | 57.304 | 55.556 | 0.00 | 0.00 | 38.16 | 3.10 |
1042 | 1335 | 2.928416 | TCGTGCAGAGTCGAGAGAA | 58.072 | 52.632 | 0.00 | 0.00 | 45.01 | 2.87 |
1043 | 1336 | 0.799393 | TCGTGCAGAGTCGAGAGAAG | 59.201 | 55.000 | 0.00 | 0.00 | 45.01 | 2.85 |
1062 | 1355 | 2.823821 | CGATCGATCGCAACGACG | 59.176 | 61.111 | 32.34 | 9.59 | 43.84 | 5.12 |
1064 | 1357 | 1.831624 | GATCGATCGCAACGACGAC | 59.168 | 57.895 | 11.09 | 7.36 | 46.28 | 4.34 |
1068 | 1361 | 0.861866 | CGATCGCAACGACGACATCT | 60.862 | 55.000 | 0.26 | 0.00 | 46.28 | 2.90 |
1070 | 1363 | 1.774085 | GATCGCAACGACGACATCTAC | 59.226 | 52.381 | 0.00 | 0.00 | 46.28 | 2.59 |
1084 | 1377 | 0.467474 | ATCTACAGGATCGACCGGCA | 60.467 | 55.000 | 0.00 | 0.00 | 44.74 | 5.69 |
1098 | 1391 | 3.053291 | GGCAACGCCGACATGGAA | 61.053 | 61.111 | 0.00 | 0.00 | 39.62 | 3.53 |
1148 | 1441 | 2.875485 | CCTCGTCATCGACCACGT | 59.125 | 61.111 | 15.47 | 0.00 | 41.35 | 4.49 |
1180 | 1473 | 1.078143 | GAGCCCTGCACAACCCTAG | 60.078 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
1226 | 1522 | 4.656117 | ACACCACGCATGCGACGA | 62.656 | 61.111 | 43.72 | 0.00 | 42.83 | 4.20 |
1234 | 1530 | 3.770040 | CATGCGACGACCCTGGGA | 61.770 | 66.667 | 22.23 | 0.00 | 0.00 | 4.37 |
1235 | 1531 | 3.461773 | ATGCGACGACCCTGGGAG | 61.462 | 66.667 | 22.23 | 15.27 | 0.00 | 4.30 |
1278 | 4112 | 3.697747 | CCGCACGGGTGGGTTCTA | 61.698 | 66.667 | 10.18 | 0.00 | 41.16 | 2.10 |
1319 | 4153 | 3.488423 | CACCTTCCTGTGGAGCCT | 58.512 | 61.111 | 0.00 | 0.00 | 31.21 | 4.58 |
1329 | 4163 | 0.471780 | TGTGGAGCCTTCAGACCTCA | 60.472 | 55.000 | 0.00 | 0.00 | 0.00 | 3.86 |
1376 | 4210 | 0.605589 | CCGGAGCAGGAGATACCATC | 59.394 | 60.000 | 0.00 | 0.00 | 42.04 | 3.51 |
1417 | 4254 | 4.338710 | GCAAGCCCACCACCGGTA | 62.339 | 66.667 | 6.87 | 0.00 | 32.11 | 4.02 |
1418 | 4255 | 2.432563 | CAAGCCCACCACCGGTAA | 59.567 | 61.111 | 6.87 | 0.00 | 32.11 | 2.85 |
1737 | 4583 | 4.101448 | ACCACCTCCATGGCGCTC | 62.101 | 66.667 | 6.96 | 0.00 | 44.33 | 5.03 |
1740 | 4820 | 3.474570 | ACCTCCATGGCGCTCTCC | 61.475 | 66.667 | 6.96 | 0.00 | 40.22 | 3.71 |
1773 | 4853 | 2.496817 | GGCGAGCTCTACCTGGTG | 59.503 | 66.667 | 12.85 | 0.00 | 0.00 | 4.17 |
1797 | 4877 | 2.076863 | GCCTTCTTGCACTACGACATT | 58.923 | 47.619 | 0.00 | 0.00 | 0.00 | 2.71 |
1843 | 4923 | 2.257371 | GCGTGTACGAGCTGGACA | 59.743 | 61.111 | 8.82 | 0.00 | 43.02 | 4.02 |
1870 | 4950 | 2.456287 | GAAGAGGTGGCGCAAGGTCT | 62.456 | 60.000 | 10.83 | 0.00 | 38.28 | 3.85 |
2005 | 5085 | 1.004440 | AACCTGCTGCGAGTCTTCC | 60.004 | 57.895 | 0.00 | 0.00 | 0.00 | 3.46 |
2006 | 5086 | 2.125350 | CCTGCTGCGAGTCTTCCC | 60.125 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
2061 | 5144 | 4.753610 | CACGATCCATGCAAAGATATCACT | 59.246 | 41.667 | 5.32 | 0.00 | 0.00 | 3.41 |
2071 | 5154 | 4.584325 | GCAAAGATATCACTGGGCCAAATA | 59.416 | 41.667 | 8.04 | 6.54 | 0.00 | 1.40 |
2109 | 5192 | 5.735285 | TGCTTCCTAGTGATGATCCATAG | 57.265 | 43.478 | 0.00 | 0.00 | 0.00 | 2.23 |
2159 | 5250 | 4.961438 | ACTGAAGGAATTGGTTGCAATT | 57.039 | 36.364 | 0.59 | 0.00 | 37.47 | 2.32 |
2161 | 5252 | 5.683681 | ACTGAAGGAATTGGTTGCAATTTT | 58.316 | 33.333 | 0.59 | 0.00 | 35.18 | 1.82 |
2162 | 5253 | 5.759763 | ACTGAAGGAATTGGTTGCAATTTTC | 59.240 | 36.000 | 0.59 | 3.92 | 35.18 | 2.29 |
2167 | 5258 | 7.967890 | AGGAATTGGTTGCAATTTTCTTTAG | 57.032 | 32.000 | 0.59 | 0.00 | 35.18 | 1.85 |
2168 | 5259 | 7.508687 | AGGAATTGGTTGCAATTTTCTTTAGT | 58.491 | 30.769 | 0.59 | 0.00 | 35.18 | 2.24 |
2171 | 5262 | 7.951530 | ATTGGTTGCAATTTTCTTTAGTGAG | 57.048 | 32.000 | 0.59 | 0.00 | 0.00 | 3.51 |
2173 | 5264 | 5.362430 | TGGTTGCAATTTTCTTTAGTGAGGT | 59.638 | 36.000 | 0.59 | 0.00 | 0.00 | 3.85 |
2176 | 5267 | 7.279981 | GGTTGCAATTTTCTTTAGTGAGGTTTT | 59.720 | 33.333 | 0.59 | 0.00 | 0.00 | 2.43 |
2194 | 5285 | 6.924111 | AGGTTTTGATTGTATGGACATGAAC | 58.076 | 36.000 | 0.00 | 0.00 | 34.86 | 3.18 |
2195 | 5286 | 6.721208 | AGGTTTTGATTGTATGGACATGAACT | 59.279 | 34.615 | 0.00 | 0.00 | 34.86 | 3.01 |
2196 | 5287 | 7.888021 | AGGTTTTGATTGTATGGACATGAACTA | 59.112 | 33.333 | 0.00 | 0.00 | 34.86 | 2.24 |
2281 | 5373 | 9.788889 | ATATTTGCAAGATATTCTGTGATGAGA | 57.211 | 29.630 | 0.00 | 0.00 | 0.00 | 3.27 |
2282 | 5374 | 8.693120 | ATTTGCAAGATATTCTGTGATGAGAT | 57.307 | 30.769 | 0.00 | 0.00 | 0.00 | 2.75 |
2283 | 5375 | 7.725818 | TTGCAAGATATTCTGTGATGAGATC | 57.274 | 36.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2284 | 5376 | 6.823497 | TGCAAGATATTCTGTGATGAGATCA | 58.177 | 36.000 | 0.00 | 0.00 | 36.84 | 2.92 |
2285 | 5377 | 7.277396 | TGCAAGATATTCTGTGATGAGATCAA | 58.723 | 34.615 | 0.00 | 0.00 | 41.69 | 2.57 |
2286 | 5378 | 7.937394 | TGCAAGATATTCTGTGATGAGATCAAT | 59.063 | 33.333 | 0.00 | 0.00 | 41.69 | 2.57 |
2287 | 5379 | 9.433153 | GCAAGATATTCTGTGATGAGATCAATA | 57.567 | 33.333 | 0.00 | 0.00 | 41.69 | 1.90 |
2313 | 5405 | 9.793259 | ATAATAGTCAGACTTGAACCTTGAAAA | 57.207 | 29.630 | 8.80 | 0.00 | 34.49 | 2.29 |
2314 | 5406 | 8.697507 | AATAGTCAGACTTGAACCTTGAAAAT | 57.302 | 30.769 | 8.80 | 0.00 | 34.49 | 1.82 |
2315 | 5407 | 9.793259 | AATAGTCAGACTTGAACCTTGAAAATA | 57.207 | 29.630 | 8.80 | 0.00 | 34.49 | 1.40 |
2316 | 5408 | 9.793259 | ATAGTCAGACTTGAACCTTGAAAATAA | 57.207 | 29.630 | 8.80 | 0.00 | 34.49 | 1.40 |
2317 | 5409 | 8.519799 | AGTCAGACTTGAACCTTGAAAATAAA | 57.480 | 30.769 | 0.00 | 0.00 | 34.49 | 1.40 |
2318 | 5410 | 8.406297 | AGTCAGACTTGAACCTTGAAAATAAAC | 58.594 | 33.333 | 0.00 | 0.00 | 34.49 | 2.01 |
2319 | 5411 | 8.188139 | GTCAGACTTGAACCTTGAAAATAAACA | 58.812 | 33.333 | 0.00 | 0.00 | 34.49 | 2.83 |
2320 | 5412 | 8.405531 | TCAGACTTGAACCTTGAAAATAAACAG | 58.594 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2321 | 5413 | 8.405531 | CAGACTTGAACCTTGAAAATAAACAGA | 58.594 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
2322 | 5414 | 8.966868 | AGACTTGAACCTTGAAAATAAACAGAA | 58.033 | 29.630 | 0.00 | 0.00 | 0.00 | 3.02 |
2323 | 5415 | 9.750125 | GACTTGAACCTTGAAAATAAACAGAAT | 57.250 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
2328 | 5420 | 9.543018 | GAACCTTGAAAATAAACAGAATACTCG | 57.457 | 33.333 | 0.00 | 0.00 | 0.00 | 4.18 |
2329 | 5421 | 8.842358 | ACCTTGAAAATAAACAGAATACTCGA | 57.158 | 30.769 | 0.00 | 0.00 | 0.00 | 4.04 |
2330 | 5422 | 9.280174 | ACCTTGAAAATAAACAGAATACTCGAA | 57.720 | 29.630 | 0.00 | 0.00 | 0.00 | 3.71 |
2338 | 5430 | 6.555812 | AAACAGAATACTCGAAAAAGGACC | 57.444 | 37.500 | 0.00 | 0.00 | 0.00 | 4.46 |
2339 | 5431 | 5.223449 | ACAGAATACTCGAAAAAGGACCA | 57.777 | 39.130 | 0.00 | 0.00 | 0.00 | 4.02 |
2340 | 5432 | 5.617252 | ACAGAATACTCGAAAAAGGACCAA | 58.383 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
2341 | 5433 | 5.469084 | ACAGAATACTCGAAAAAGGACCAAC | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2342 | 5434 | 5.468746 | CAGAATACTCGAAAAAGGACCAACA | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.33 |
2343 | 5435 | 5.701290 | AGAATACTCGAAAAAGGACCAACAG | 59.299 | 40.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2344 | 5436 | 3.553828 | ACTCGAAAAAGGACCAACAGA | 57.446 | 42.857 | 0.00 | 0.00 | 0.00 | 3.41 |
2345 | 5437 | 3.881220 | ACTCGAAAAAGGACCAACAGAA | 58.119 | 40.909 | 0.00 | 0.00 | 0.00 | 3.02 |
2346 | 5438 | 4.461198 | ACTCGAAAAAGGACCAACAGAAT | 58.539 | 39.130 | 0.00 | 0.00 | 0.00 | 2.40 |
2347 | 5439 | 4.515567 | ACTCGAAAAAGGACCAACAGAATC | 59.484 | 41.667 | 0.00 | 0.00 | 0.00 | 2.52 |
2348 | 5440 | 4.456535 | TCGAAAAAGGACCAACAGAATCA | 58.543 | 39.130 | 0.00 | 0.00 | 0.00 | 2.57 |
2349 | 5441 | 4.884744 | TCGAAAAAGGACCAACAGAATCAA | 59.115 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
2350 | 5442 | 5.358442 | TCGAAAAAGGACCAACAGAATCAAA | 59.642 | 36.000 | 0.00 | 0.00 | 0.00 | 2.69 |
2351 | 5443 | 6.039616 | CGAAAAAGGACCAACAGAATCAAAA | 58.960 | 36.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2352 | 5444 | 6.701400 | CGAAAAAGGACCAACAGAATCAAAAT | 59.299 | 34.615 | 0.00 | 0.00 | 0.00 | 1.82 |
2353 | 5445 | 7.865385 | CGAAAAAGGACCAACAGAATCAAAATA | 59.135 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2354 | 5446 | 9.196552 | GAAAAAGGACCAACAGAATCAAAATAG | 57.803 | 33.333 | 0.00 | 0.00 | 0.00 | 1.73 |
2355 | 5447 | 5.904362 | AGGACCAACAGAATCAAAATAGC | 57.096 | 39.130 | 0.00 | 0.00 | 0.00 | 2.97 |
2356 | 5448 | 5.574188 | AGGACCAACAGAATCAAAATAGCT | 58.426 | 37.500 | 0.00 | 0.00 | 0.00 | 3.32 |
2357 | 5449 | 5.416952 | AGGACCAACAGAATCAAAATAGCTG | 59.583 | 40.000 | 0.00 | 0.00 | 0.00 | 4.24 |
2358 | 5450 | 5.415701 | GGACCAACAGAATCAAAATAGCTGA | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2359 | 5451 | 6.071952 | GGACCAACAGAATCAAAATAGCTGAA | 60.072 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
2360 | 5452 | 6.917533 | ACCAACAGAATCAAAATAGCTGAAG | 58.082 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2361 | 5453 | 6.716628 | ACCAACAGAATCAAAATAGCTGAAGA | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 2.87 |
2362 | 5454 | 7.231317 | ACCAACAGAATCAAAATAGCTGAAGAA | 59.769 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2363 | 5455 | 7.540055 | CCAACAGAATCAAAATAGCTGAAGAAC | 59.460 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
2364 | 5456 | 7.150783 | ACAGAATCAAAATAGCTGAAGAACC | 57.849 | 36.000 | 0.00 | 0.00 | 0.00 | 3.62 |
2365 | 5457 | 6.716628 | ACAGAATCAAAATAGCTGAAGAACCA | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
2366 | 5458 | 7.025963 | CAGAATCAAAATAGCTGAAGAACCAC | 58.974 | 38.462 | 0.00 | 0.00 | 0.00 | 4.16 |
2367 | 5459 | 6.716628 | AGAATCAAAATAGCTGAAGAACCACA | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 4.17 |
2368 | 5460 | 6.899393 | ATCAAAATAGCTGAAGAACCACAA | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
2369 | 5461 | 6.707440 | TCAAAATAGCTGAAGAACCACAAA | 57.293 | 33.333 | 0.00 | 0.00 | 0.00 | 2.83 |
2370 | 5462 | 7.288810 | TCAAAATAGCTGAAGAACCACAAAT | 57.711 | 32.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2371 | 5463 | 8.402798 | TCAAAATAGCTGAAGAACCACAAATA | 57.597 | 30.769 | 0.00 | 0.00 | 0.00 | 1.40 |
2372 | 5464 | 9.023962 | TCAAAATAGCTGAAGAACCACAAATAT | 57.976 | 29.630 | 0.00 | 0.00 | 0.00 | 1.28 |
2593 | 5687 | 4.789095 | TTCGTCTGTTTGTCTTAGTTGC | 57.211 | 40.909 | 0.00 | 0.00 | 0.00 | 4.17 |
2594 | 5688 | 3.787785 | TCGTCTGTTTGTCTTAGTTGCA | 58.212 | 40.909 | 0.00 | 0.00 | 0.00 | 4.08 |
2725 | 5835 | 7.100458 | ACAAAATTCATTTCCCTATCCTTCG | 57.900 | 36.000 | 0.00 | 0.00 | 0.00 | 3.79 |
2797 | 5907 | 7.513371 | TTTTCCGCTCCTATTTTTCTTTGTA | 57.487 | 32.000 | 0.00 | 0.00 | 0.00 | 2.41 |
3011 | 6123 | 4.253685 | GTCTACTTATTGGTCTGCTTGCA | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 4.08 |
3041 | 6153 | 6.853872 | CGTCTTTTATTGGAACATTTTCACGA | 59.146 | 34.615 | 0.00 | 0.00 | 39.30 | 4.35 |
3047 | 6159 | 1.577221 | GAACATTTTCACGACGCGAC | 58.423 | 50.000 | 15.93 | 5.54 | 0.00 | 5.19 |
3301 | 6436 | 5.482175 | GGAGGGCTACATGTCTATGTATTCT | 59.518 | 44.000 | 0.00 | 0.68 | 45.90 | 2.40 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
268 | 350 | 3.642778 | TTACTCCCAGCAGCGCGTC | 62.643 | 63.158 | 8.43 | 0.00 | 0.00 | 5.19 |
330 | 490 | 1.520787 | CAACCACCGGCCGAGTATC | 60.521 | 63.158 | 30.73 | 0.00 | 0.00 | 2.24 |
726 | 1011 | 1.607801 | CGGTGGCCATCAGAGAGTGA | 61.608 | 60.000 | 18.15 | 0.00 | 40.38 | 3.41 |
727 | 1012 | 1.153489 | CGGTGGCCATCAGAGAGTG | 60.153 | 63.158 | 18.15 | 0.00 | 0.00 | 3.51 |
729 | 1014 | 1.142748 | GTCGGTGGCCATCAGAGAG | 59.857 | 63.158 | 18.15 | 0.00 | 0.00 | 3.20 |
730 | 1015 | 0.977627 | ATGTCGGTGGCCATCAGAGA | 60.978 | 55.000 | 18.15 | 13.07 | 0.00 | 3.10 |
732 | 1017 | 0.752658 | CTATGTCGGTGGCCATCAGA | 59.247 | 55.000 | 18.15 | 11.61 | 0.00 | 3.27 |
733 | 1018 | 0.882042 | GCTATGTCGGTGGCCATCAG | 60.882 | 60.000 | 18.15 | 9.21 | 0.00 | 2.90 |
735 | 1020 | 0.250467 | ATGCTATGTCGGTGGCCATC | 60.250 | 55.000 | 9.72 | 7.61 | 0.00 | 3.51 |
803 | 1096 | 3.343617 | TCCATAGTAGTGTGCCTTTTGC | 58.656 | 45.455 | 0.00 | 0.00 | 41.77 | 3.68 |
804 | 1097 | 5.957842 | TTTCCATAGTAGTGTGCCTTTTG | 57.042 | 39.130 | 0.00 | 0.00 | 0.00 | 2.44 |
805 | 1098 | 5.830991 | TGTTTTCCATAGTAGTGTGCCTTTT | 59.169 | 36.000 | 0.00 | 0.00 | 0.00 | 2.27 |
806 | 1099 | 5.381757 | TGTTTTCCATAGTAGTGTGCCTTT | 58.618 | 37.500 | 0.00 | 0.00 | 0.00 | 3.11 |
807 | 1100 | 4.980573 | TGTTTTCCATAGTAGTGTGCCTT | 58.019 | 39.130 | 0.00 | 0.00 | 0.00 | 4.35 |
808 | 1101 | 4.634012 | TGTTTTCCATAGTAGTGTGCCT | 57.366 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
809 | 1102 | 4.438744 | GCATGTTTTCCATAGTAGTGTGCC | 60.439 | 45.833 | 0.00 | 0.00 | 30.71 | 5.01 |
810 | 1103 | 4.396166 | AGCATGTTTTCCATAGTAGTGTGC | 59.604 | 41.667 | 0.00 | 0.00 | 30.71 | 4.57 |
811 | 1104 | 6.500684 | AAGCATGTTTTCCATAGTAGTGTG | 57.499 | 37.500 | 0.00 | 0.00 | 30.71 | 3.82 |
812 | 1105 | 7.230510 | TCAAAAGCATGTTTTCCATAGTAGTGT | 59.769 | 33.333 | 8.06 | 0.00 | 30.71 | 3.55 |
813 | 1106 | 7.592938 | TCAAAAGCATGTTTTCCATAGTAGTG | 58.407 | 34.615 | 8.06 | 0.25 | 30.71 | 2.74 |
814 | 1107 | 7.759489 | TCAAAAGCATGTTTTCCATAGTAGT | 57.241 | 32.000 | 8.06 | 0.00 | 30.71 | 2.73 |
815 | 1108 | 9.643693 | ATTTCAAAAGCATGTTTTCCATAGTAG | 57.356 | 29.630 | 8.06 | 0.00 | 30.71 | 2.57 |
816 | 1109 | 9.638239 | GATTTCAAAAGCATGTTTTCCATAGTA | 57.362 | 29.630 | 8.06 | 0.00 | 30.71 | 1.82 |
817 | 1110 | 7.603784 | GGATTTCAAAAGCATGTTTTCCATAGT | 59.396 | 33.333 | 8.06 | 0.00 | 30.71 | 2.12 |
818 | 1111 | 7.603404 | TGGATTTCAAAAGCATGTTTTCCATAG | 59.397 | 33.333 | 8.06 | 0.00 | 30.71 | 2.23 |
819 | 1112 | 7.387397 | GTGGATTTCAAAAGCATGTTTTCCATA | 59.613 | 33.333 | 12.47 | 0.18 | 30.71 | 2.74 |
820 | 1113 | 6.205270 | GTGGATTTCAAAAGCATGTTTTCCAT | 59.795 | 34.615 | 12.47 | 2.47 | 0.00 | 3.41 |
821 | 1114 | 5.526846 | GTGGATTTCAAAAGCATGTTTTCCA | 59.473 | 36.000 | 8.06 | 7.43 | 0.00 | 3.53 |
822 | 1115 | 5.759763 | AGTGGATTTCAAAAGCATGTTTTCC | 59.240 | 36.000 | 8.06 | 4.90 | 0.00 | 3.13 |
823 | 1116 | 6.849588 | AGTGGATTTCAAAAGCATGTTTTC | 57.150 | 33.333 | 8.06 | 0.00 | 0.00 | 2.29 |
824 | 1117 | 8.370182 | AGATAGTGGATTTCAAAAGCATGTTTT | 58.630 | 29.630 | 1.14 | 1.14 | 0.00 | 2.43 |
825 | 1118 | 7.899973 | AGATAGTGGATTTCAAAAGCATGTTT | 58.100 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
826 | 1119 | 7.472334 | AGATAGTGGATTTCAAAAGCATGTT | 57.528 | 32.000 | 0.00 | 0.00 | 0.00 | 2.71 |
827 | 1120 | 8.757982 | ATAGATAGTGGATTTCAAAAGCATGT | 57.242 | 30.769 | 0.00 | 0.00 | 0.00 | 3.21 |
828 | 1121 | 8.013947 | CGATAGATAGTGGATTTCAAAAGCATG | 58.986 | 37.037 | 0.00 | 0.00 | 39.76 | 4.06 |
829 | 1122 | 7.173907 | CCGATAGATAGTGGATTTCAAAAGCAT | 59.826 | 37.037 | 0.00 | 0.00 | 39.76 | 3.79 |
830 | 1123 | 6.483307 | CCGATAGATAGTGGATTTCAAAAGCA | 59.517 | 38.462 | 0.00 | 0.00 | 39.76 | 3.91 |
831 | 1124 | 6.566753 | GCCGATAGATAGTGGATTTCAAAAGC | 60.567 | 42.308 | 0.00 | 0.00 | 39.76 | 3.51 |
832 | 1125 | 6.708054 | AGCCGATAGATAGTGGATTTCAAAAG | 59.292 | 38.462 | 0.00 | 0.00 | 39.76 | 2.27 |
833 | 1126 | 6.591935 | AGCCGATAGATAGTGGATTTCAAAA | 58.408 | 36.000 | 0.00 | 0.00 | 39.76 | 2.44 |
834 | 1127 | 6.174720 | AGCCGATAGATAGTGGATTTCAAA | 57.825 | 37.500 | 0.00 | 0.00 | 39.76 | 2.69 |
835 | 1128 | 5.808366 | AGCCGATAGATAGTGGATTTCAA | 57.192 | 39.130 | 0.00 | 0.00 | 39.76 | 2.69 |
836 | 1129 | 5.185249 | GGTAGCCGATAGATAGTGGATTTCA | 59.815 | 44.000 | 0.00 | 0.00 | 39.76 | 2.69 |
837 | 1130 | 5.419471 | AGGTAGCCGATAGATAGTGGATTTC | 59.581 | 44.000 | 0.00 | 0.00 | 39.76 | 2.17 |
838 | 1131 | 5.186021 | CAGGTAGCCGATAGATAGTGGATTT | 59.814 | 44.000 | 0.00 | 0.00 | 39.76 | 2.17 |
839 | 1132 | 4.707448 | CAGGTAGCCGATAGATAGTGGATT | 59.293 | 45.833 | 0.00 | 0.00 | 39.76 | 3.01 |
840 | 1133 | 4.274147 | CAGGTAGCCGATAGATAGTGGAT | 58.726 | 47.826 | 0.00 | 0.00 | 39.76 | 3.41 |
841 | 1134 | 3.561528 | CCAGGTAGCCGATAGATAGTGGA | 60.562 | 52.174 | 0.00 | 0.00 | 39.76 | 4.02 |
842 | 1135 | 2.755655 | CCAGGTAGCCGATAGATAGTGG | 59.244 | 54.545 | 0.00 | 0.00 | 39.76 | 4.00 |
843 | 1136 | 2.164624 | GCCAGGTAGCCGATAGATAGTG | 59.835 | 54.545 | 0.00 | 0.00 | 39.76 | 2.74 |
844 | 1137 | 2.448453 | GCCAGGTAGCCGATAGATAGT | 58.552 | 52.381 | 0.00 | 0.00 | 39.76 | 2.12 |
845 | 1138 | 1.751924 | GGCCAGGTAGCCGATAGATAG | 59.248 | 57.143 | 0.00 | 0.00 | 44.57 | 2.08 |
846 | 1139 | 1.848652 | GGCCAGGTAGCCGATAGATA | 58.151 | 55.000 | 0.00 | 0.00 | 44.57 | 1.98 |
847 | 1140 | 2.672414 | GGCCAGGTAGCCGATAGAT | 58.328 | 57.895 | 0.00 | 0.00 | 44.57 | 1.98 |
848 | 1141 | 4.192950 | GGCCAGGTAGCCGATAGA | 57.807 | 61.111 | 0.00 | 0.00 | 44.57 | 1.98 |
855 | 1148 | 1.741327 | TTACGATCCGGCCAGGTAGC | 61.741 | 60.000 | 2.24 | 0.00 | 41.99 | 3.58 |
856 | 1149 | 0.748450 | TTTACGATCCGGCCAGGTAG | 59.252 | 55.000 | 2.24 | 0.00 | 41.99 | 3.18 |
857 | 1150 | 1.193323 | TTTTACGATCCGGCCAGGTA | 58.807 | 50.000 | 2.24 | 0.00 | 41.99 | 3.08 |
858 | 1151 | 0.325602 | TTTTTACGATCCGGCCAGGT | 59.674 | 50.000 | 2.24 | 0.00 | 41.99 | 4.00 |
859 | 1152 | 0.730840 | GTTTTTACGATCCGGCCAGG | 59.269 | 55.000 | 2.24 | 5.27 | 42.97 | 4.45 |
860 | 1153 | 1.444836 | TGTTTTTACGATCCGGCCAG | 58.555 | 50.000 | 2.24 | 0.00 | 0.00 | 4.85 |
861 | 1154 | 1.807742 | CTTGTTTTTACGATCCGGCCA | 59.192 | 47.619 | 2.24 | 0.00 | 0.00 | 5.36 |
862 | 1155 | 1.131693 | CCTTGTTTTTACGATCCGGCC | 59.868 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
863 | 1156 | 1.466866 | GCCTTGTTTTTACGATCCGGC | 60.467 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
864 | 1157 | 2.081462 | AGCCTTGTTTTTACGATCCGG | 58.919 | 47.619 | 0.00 | 0.00 | 0.00 | 5.14 |
865 | 1158 | 3.000727 | AGAGCCTTGTTTTTACGATCCG | 58.999 | 45.455 | 0.00 | 0.00 | 0.00 | 4.18 |
866 | 1159 | 3.426292 | GCAGAGCCTTGTTTTTACGATCC | 60.426 | 47.826 | 0.00 | 0.00 | 0.00 | 3.36 |
867 | 1160 | 3.188460 | TGCAGAGCCTTGTTTTTACGATC | 59.812 | 43.478 | 0.00 | 0.00 | 0.00 | 3.69 |
868 | 1161 | 3.058224 | GTGCAGAGCCTTGTTTTTACGAT | 60.058 | 43.478 | 0.00 | 0.00 | 0.00 | 3.73 |
869 | 1162 | 2.289547 | GTGCAGAGCCTTGTTTTTACGA | 59.710 | 45.455 | 0.00 | 0.00 | 0.00 | 3.43 |
870 | 1163 | 2.650608 | GTGCAGAGCCTTGTTTTTACG | 58.349 | 47.619 | 0.00 | 0.00 | 0.00 | 3.18 |
871 | 1164 | 2.289547 | TCGTGCAGAGCCTTGTTTTTAC | 59.710 | 45.455 | 0.00 | 0.00 | 0.00 | 2.01 |
872 | 1165 | 2.289547 | GTCGTGCAGAGCCTTGTTTTTA | 59.710 | 45.455 | 0.00 | 0.00 | 0.00 | 1.52 |
873 | 1166 | 1.065551 | GTCGTGCAGAGCCTTGTTTTT | 59.934 | 47.619 | 0.00 | 0.00 | 0.00 | 1.94 |
874 | 1167 | 0.663153 | GTCGTGCAGAGCCTTGTTTT | 59.337 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
875 | 1168 | 0.179045 | AGTCGTGCAGAGCCTTGTTT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.83 |
876 | 1169 | 0.601311 | GAGTCGTGCAGAGCCTTGTT | 60.601 | 55.000 | 0.00 | 0.00 | 0.00 | 2.83 |
877 | 1170 | 1.005630 | GAGTCGTGCAGAGCCTTGT | 60.006 | 57.895 | 0.00 | 0.00 | 0.00 | 3.16 |
878 | 1171 | 1.739562 | GGAGTCGTGCAGAGCCTTG | 60.740 | 63.158 | 0.00 | 0.00 | 0.00 | 3.61 |
879 | 1172 | 2.659610 | GGAGTCGTGCAGAGCCTT | 59.340 | 61.111 | 0.00 | 0.00 | 0.00 | 4.35 |
880 | 1173 | 3.753434 | CGGAGTCGTGCAGAGCCT | 61.753 | 66.667 | 0.00 | 0.00 | 0.00 | 4.58 |
881 | 1174 | 2.945398 | GATCGGAGTCGTGCAGAGCC | 62.945 | 65.000 | 0.00 | 0.00 | 37.69 | 4.70 |
882 | 1175 | 1.587613 | GATCGGAGTCGTGCAGAGC | 60.588 | 63.158 | 0.00 | 0.00 | 37.69 | 4.09 |
883 | 1176 | 1.297967 | CGATCGGAGTCGTGCAGAG | 60.298 | 63.158 | 7.38 | 0.00 | 36.88 | 3.35 |
884 | 1177 | 2.791927 | CGATCGGAGTCGTGCAGA | 59.208 | 61.111 | 7.38 | 0.00 | 36.88 | 4.26 |
890 | 1183 | 0.586802 | TCTGCATACGATCGGAGTCG | 59.413 | 55.000 | 20.98 | 4.90 | 46.56 | 4.18 |
891 | 1184 | 1.068885 | CCTCTGCATACGATCGGAGTC | 60.069 | 57.143 | 20.98 | 7.37 | 34.67 | 3.36 |
892 | 1185 | 0.955178 | CCTCTGCATACGATCGGAGT | 59.045 | 55.000 | 20.98 | 0.30 | 34.67 | 3.85 |
893 | 1186 | 1.198867 | CTCCTCTGCATACGATCGGAG | 59.801 | 57.143 | 20.98 | 14.13 | 35.90 | 4.63 |
894 | 1187 | 1.239347 | CTCCTCTGCATACGATCGGA | 58.761 | 55.000 | 20.98 | 12.40 | 0.00 | 4.55 |
895 | 1188 | 0.242286 | CCTCCTCTGCATACGATCGG | 59.758 | 60.000 | 20.98 | 2.45 | 0.00 | 4.18 |
896 | 1189 | 0.242286 | CCCTCCTCTGCATACGATCG | 59.758 | 60.000 | 14.88 | 14.88 | 0.00 | 3.69 |
897 | 1190 | 1.621992 | TCCCTCCTCTGCATACGATC | 58.378 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
898 | 1191 | 2.317371 | ATCCCTCCTCTGCATACGAT | 57.683 | 50.000 | 0.00 | 0.00 | 0.00 | 3.73 |
899 | 1192 | 1.964223 | GAATCCCTCCTCTGCATACGA | 59.036 | 52.381 | 0.00 | 0.00 | 0.00 | 3.43 |
900 | 1193 | 1.336332 | CGAATCCCTCCTCTGCATACG | 60.336 | 57.143 | 0.00 | 0.00 | 0.00 | 3.06 |
901 | 1194 | 1.964223 | TCGAATCCCTCCTCTGCATAC | 59.036 | 52.381 | 0.00 | 0.00 | 0.00 | 2.39 |
902 | 1195 | 2.242926 | CTCGAATCCCTCCTCTGCATA | 58.757 | 52.381 | 0.00 | 0.00 | 0.00 | 3.14 |
903 | 1196 | 1.047002 | CTCGAATCCCTCCTCTGCAT | 58.953 | 55.000 | 0.00 | 0.00 | 0.00 | 3.96 |
904 | 1197 | 0.324738 | ACTCGAATCCCTCCTCTGCA | 60.325 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
905 | 1198 | 0.387565 | GACTCGAATCCCTCCTCTGC | 59.612 | 60.000 | 0.00 | 0.00 | 0.00 | 4.26 |
906 | 1199 | 0.665835 | CGACTCGAATCCCTCCTCTG | 59.334 | 60.000 | 0.00 | 0.00 | 0.00 | 3.35 |
907 | 1200 | 0.466555 | CCGACTCGAATCCCTCCTCT | 60.467 | 60.000 | 0.00 | 0.00 | 0.00 | 3.69 |
908 | 1201 | 1.457009 | CCCGACTCGAATCCCTCCTC | 61.457 | 65.000 | 0.00 | 0.00 | 0.00 | 3.71 |
909 | 1202 | 1.455959 | CCCGACTCGAATCCCTCCT | 60.456 | 63.158 | 0.00 | 0.00 | 0.00 | 3.69 |
910 | 1203 | 2.499827 | CCCCGACTCGAATCCCTCC | 61.500 | 68.421 | 0.00 | 0.00 | 0.00 | 4.30 |
911 | 1204 | 1.736365 | GACCCCGACTCGAATCCCTC | 61.736 | 65.000 | 0.00 | 0.00 | 0.00 | 4.30 |
912 | 1205 | 1.757340 | GACCCCGACTCGAATCCCT | 60.757 | 63.158 | 0.00 | 0.00 | 0.00 | 4.20 |
913 | 1206 | 2.794028 | GGACCCCGACTCGAATCCC | 61.794 | 68.421 | 0.00 | 0.00 | 0.00 | 3.85 |
914 | 1207 | 1.610554 | TTGGACCCCGACTCGAATCC | 61.611 | 60.000 | 0.00 | 4.53 | 0.00 | 3.01 |
915 | 1208 | 0.459759 | GTTGGACCCCGACTCGAATC | 60.460 | 60.000 | 0.00 | 0.00 | 35.15 | 2.52 |
916 | 1209 | 1.189524 | TGTTGGACCCCGACTCGAAT | 61.190 | 55.000 | 0.00 | 0.00 | 38.66 | 3.34 |
917 | 1210 | 1.833492 | TGTTGGACCCCGACTCGAA | 60.833 | 57.895 | 0.00 | 0.00 | 38.66 | 3.71 |
918 | 1211 | 2.203523 | TGTTGGACCCCGACTCGA | 60.204 | 61.111 | 0.00 | 0.00 | 38.66 | 4.04 |
919 | 1212 | 2.048503 | GTGTTGGACCCCGACTCG | 60.049 | 66.667 | 5.11 | 0.00 | 38.66 | 4.18 |
920 | 1213 | 1.526575 | TACGTGTTGGACCCCGACTC | 61.527 | 60.000 | 0.00 | 1.01 | 38.66 | 3.36 |
921 | 1214 | 1.531365 | TACGTGTTGGACCCCGACT | 60.531 | 57.895 | 0.00 | 0.00 | 38.66 | 4.18 |
922 | 1215 | 1.373371 | GTACGTGTTGGACCCCGAC | 60.373 | 63.158 | 0.00 | 0.00 | 38.36 | 4.79 |
923 | 1216 | 2.918345 | CGTACGTGTTGGACCCCGA | 61.918 | 63.158 | 7.22 | 0.00 | 0.00 | 5.14 |
924 | 1217 | 2.431260 | CGTACGTGTTGGACCCCG | 60.431 | 66.667 | 7.22 | 0.00 | 0.00 | 5.73 |
925 | 1218 | 1.373371 | GACGTACGTGTTGGACCCC | 60.373 | 63.158 | 28.16 | 3.68 | 0.00 | 4.95 |
926 | 1219 | 1.373371 | GGACGTACGTGTTGGACCC | 60.373 | 63.158 | 28.16 | 14.95 | 0.00 | 4.46 |
927 | 1220 | 1.730547 | CGGACGTACGTGTTGGACC | 60.731 | 63.158 | 28.16 | 18.01 | 0.00 | 4.46 |
928 | 1221 | 1.730547 | CCGGACGTACGTGTTGGAC | 60.731 | 63.158 | 28.16 | 9.95 | 0.00 | 4.02 |
929 | 1222 | 2.644418 | CCGGACGTACGTGTTGGA | 59.356 | 61.111 | 28.16 | 0.00 | 0.00 | 3.53 |
930 | 1223 | 2.431260 | CCCGGACGTACGTGTTGG | 60.431 | 66.667 | 28.16 | 22.20 | 0.00 | 3.77 |
931 | 1224 | 3.107661 | GCCCGGACGTACGTGTTG | 61.108 | 66.667 | 28.16 | 14.46 | 0.00 | 3.33 |
932 | 1225 | 3.604667 | TGCCCGGACGTACGTGTT | 61.605 | 61.111 | 28.16 | 0.00 | 0.00 | 3.32 |
933 | 1226 | 4.347453 | GTGCCCGGACGTACGTGT | 62.347 | 66.667 | 28.16 | 0.55 | 0.00 | 4.49 |
948 | 1241 | 1.556564 | CGTGTTAGGAGGCATACGTG | 58.443 | 55.000 | 0.00 | 0.00 | 0.00 | 4.49 |
949 | 1242 | 0.179119 | GCGTGTTAGGAGGCATACGT | 60.179 | 55.000 | 0.00 | 0.00 | 34.37 | 3.57 |
950 | 1243 | 0.102481 | AGCGTGTTAGGAGGCATACG | 59.898 | 55.000 | 0.00 | 0.00 | 34.93 | 3.06 |
951 | 1244 | 2.311124 | AAGCGTGTTAGGAGGCATAC | 57.689 | 50.000 | 0.00 | 0.00 | 0.00 | 2.39 |
952 | 1245 | 4.682778 | AATAAGCGTGTTAGGAGGCATA | 57.317 | 40.909 | 0.00 | 0.00 | 0.00 | 3.14 |
953 | 1246 | 3.560636 | AATAAGCGTGTTAGGAGGCAT | 57.439 | 42.857 | 0.00 | 0.00 | 0.00 | 4.40 |
954 | 1247 | 3.343941 | AAATAAGCGTGTTAGGAGGCA | 57.656 | 42.857 | 0.00 | 0.00 | 0.00 | 4.75 |
955 | 1248 | 5.006455 | GTCTTAAATAAGCGTGTTAGGAGGC | 59.994 | 44.000 | 0.00 | 0.00 | 33.40 | 4.70 |
956 | 1249 | 5.522824 | GGTCTTAAATAAGCGTGTTAGGAGG | 59.477 | 44.000 | 0.00 | 0.00 | 33.40 | 4.30 |
957 | 1250 | 6.103997 | TGGTCTTAAATAAGCGTGTTAGGAG | 58.896 | 40.000 | 0.00 | 0.00 | 33.40 | 3.69 |
958 | 1251 | 6.040209 | TGGTCTTAAATAAGCGTGTTAGGA | 57.960 | 37.500 | 0.00 | 0.00 | 33.40 | 2.94 |
959 | 1252 | 6.730960 | TTGGTCTTAAATAAGCGTGTTAGG | 57.269 | 37.500 | 0.00 | 0.00 | 33.40 | 2.69 |
960 | 1253 | 9.113876 | CTTTTTGGTCTTAAATAAGCGTGTTAG | 57.886 | 33.333 | 0.00 | 0.00 | 33.40 | 2.34 |
961 | 1254 | 7.592164 | GCTTTTTGGTCTTAAATAAGCGTGTTA | 59.408 | 33.333 | 0.00 | 0.00 | 33.40 | 2.41 |
962 | 1255 | 6.419710 | GCTTTTTGGTCTTAAATAAGCGTGTT | 59.580 | 34.615 | 0.00 | 0.00 | 33.40 | 3.32 |
963 | 1256 | 5.918576 | GCTTTTTGGTCTTAAATAAGCGTGT | 59.081 | 36.000 | 0.00 | 0.00 | 33.40 | 4.49 |
964 | 1257 | 5.918011 | TGCTTTTTGGTCTTAAATAAGCGTG | 59.082 | 36.000 | 0.00 | 0.00 | 36.98 | 5.34 |
965 | 1258 | 5.918576 | GTGCTTTTTGGTCTTAAATAAGCGT | 59.081 | 36.000 | 0.00 | 0.00 | 36.98 | 5.07 |
966 | 1259 | 5.059221 | CGTGCTTTTTGGTCTTAAATAAGCG | 59.941 | 40.000 | 0.00 | 0.00 | 36.98 | 4.68 |
967 | 1260 | 5.164090 | GCGTGCTTTTTGGTCTTAAATAAGC | 60.164 | 40.000 | 0.00 | 0.00 | 36.00 | 3.09 |
968 | 1261 | 5.918011 | TGCGTGCTTTTTGGTCTTAAATAAG | 59.082 | 36.000 | 0.00 | 0.00 | 34.65 | 1.73 |
969 | 1262 | 5.688176 | GTGCGTGCTTTTTGGTCTTAAATAA | 59.312 | 36.000 | 0.00 | 0.00 | 0.00 | 1.40 |
970 | 1263 | 5.216648 | GTGCGTGCTTTTTGGTCTTAAATA | 58.783 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
971 | 1264 | 4.048504 | GTGCGTGCTTTTTGGTCTTAAAT | 58.951 | 39.130 | 0.00 | 0.00 | 0.00 | 1.40 |
972 | 1265 | 3.440228 | GTGCGTGCTTTTTGGTCTTAAA | 58.560 | 40.909 | 0.00 | 0.00 | 0.00 | 1.52 |
973 | 1266 | 2.539953 | CGTGCGTGCTTTTTGGTCTTAA | 60.540 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
974 | 1267 | 1.003331 | CGTGCGTGCTTTTTGGTCTTA | 60.003 | 47.619 | 0.00 | 0.00 | 0.00 | 2.10 |
975 | 1268 | 0.248458 | CGTGCGTGCTTTTTGGTCTT | 60.248 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
976 | 1269 | 1.355210 | CGTGCGTGCTTTTTGGTCT | 59.645 | 52.632 | 0.00 | 0.00 | 0.00 | 3.85 |
977 | 1270 | 2.292916 | GCGTGCGTGCTTTTTGGTC | 61.293 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
978 | 1271 | 2.278531 | GCGTGCGTGCTTTTTGGT | 60.279 | 55.556 | 0.00 | 0.00 | 0.00 | 3.67 |
979 | 1272 | 2.278466 | TGCGTGCGTGCTTTTTGG | 60.278 | 55.556 | 1.52 | 0.00 | 35.36 | 3.28 |
980 | 1273 | 2.904549 | CGTGCGTGCGTGCTTTTTG | 61.905 | 57.895 | 1.52 | 0.00 | 35.36 | 2.44 |
981 | 1274 | 2.650602 | CGTGCGTGCGTGCTTTTT | 60.651 | 55.556 | 1.52 | 0.00 | 35.36 | 1.94 |
991 | 1284 | 3.281751 | CTTCGAAGGTGCGTGCGTG | 62.282 | 63.158 | 17.70 | 0.00 | 0.00 | 5.34 |
992 | 1285 | 3.036084 | CTTCGAAGGTGCGTGCGT | 61.036 | 61.111 | 17.70 | 0.00 | 0.00 | 5.24 |
993 | 1286 | 2.733218 | TCTTCGAAGGTGCGTGCG | 60.733 | 61.111 | 24.37 | 0.00 | 0.00 | 5.34 |
994 | 1287 | 2.853914 | GTCTTCGAAGGTGCGTGC | 59.146 | 61.111 | 24.37 | 3.80 | 0.00 | 5.34 |
995 | 1288 | 1.660575 | ACGTCTTCGAAGGTGCGTG | 60.661 | 57.895 | 28.24 | 15.45 | 40.62 | 5.34 |
996 | 1289 | 1.660575 | CACGTCTTCGAAGGTGCGT | 60.661 | 57.895 | 24.37 | 25.10 | 40.62 | 5.24 |
997 | 1290 | 3.000080 | GCACGTCTTCGAAGGTGCG | 62.000 | 63.158 | 30.48 | 27.49 | 46.91 | 5.34 |
999 | 1292 | 0.508641 | CAAGCACGTCTTCGAAGGTG | 59.491 | 55.000 | 24.37 | 23.41 | 40.62 | 4.00 |
1000 | 1293 | 0.104304 | ACAAGCACGTCTTCGAAGGT | 59.896 | 50.000 | 24.37 | 12.84 | 40.62 | 3.50 |
1001 | 1294 | 1.217882 | AACAAGCACGTCTTCGAAGG | 58.782 | 50.000 | 24.37 | 12.18 | 40.62 | 3.46 |
1002 | 1295 | 3.489785 | AGTTAACAAGCACGTCTTCGAAG | 59.510 | 43.478 | 19.35 | 19.35 | 40.62 | 3.79 |
1003 | 1296 | 3.450578 | AGTTAACAAGCACGTCTTCGAA | 58.549 | 40.909 | 8.61 | 0.00 | 40.62 | 3.71 |
1004 | 1297 | 3.047796 | GAGTTAACAAGCACGTCTTCGA | 58.952 | 45.455 | 8.61 | 0.00 | 40.62 | 3.71 |
1005 | 1298 | 2.160143 | CGAGTTAACAAGCACGTCTTCG | 60.160 | 50.000 | 8.61 | 0.39 | 43.34 | 3.79 |
1006 | 1299 | 2.793232 | ACGAGTTAACAAGCACGTCTTC | 59.207 | 45.455 | 8.61 | 0.00 | 31.27 | 2.87 |
1007 | 1300 | 2.538449 | CACGAGTTAACAAGCACGTCTT | 59.462 | 45.455 | 8.61 | 0.00 | 34.78 | 3.01 |
1008 | 1301 | 2.124903 | CACGAGTTAACAAGCACGTCT | 58.875 | 47.619 | 8.61 | 0.00 | 31.82 | 4.18 |
1009 | 1302 | 1.396815 | GCACGAGTTAACAAGCACGTC | 60.397 | 52.381 | 8.61 | 0.00 | 31.82 | 4.34 |
1010 | 1303 | 0.580104 | GCACGAGTTAACAAGCACGT | 59.420 | 50.000 | 8.61 | 8.37 | 34.40 | 4.49 |
1011 | 1304 | 0.579630 | TGCACGAGTTAACAAGCACG | 59.420 | 50.000 | 8.61 | 7.78 | 0.00 | 5.34 |
1012 | 1305 | 1.864711 | TCTGCACGAGTTAACAAGCAC | 59.135 | 47.619 | 8.61 | 0.00 | 0.00 | 4.40 |
1013 | 1306 | 2.135139 | CTCTGCACGAGTTAACAAGCA | 58.865 | 47.619 | 8.61 | 10.59 | 34.95 | 3.91 |
1014 | 1307 | 2.863658 | CTCTGCACGAGTTAACAAGC | 57.136 | 50.000 | 8.61 | 6.52 | 34.95 | 4.01 |
1024 | 1317 | 0.799393 | CTTCTCTCGACTCTGCACGA | 59.201 | 55.000 | 0.00 | 0.00 | 37.03 | 4.35 |
1025 | 1318 | 0.519519 | ACTTCTCTCGACTCTGCACG | 59.480 | 55.000 | 0.00 | 0.00 | 0.00 | 5.34 |
1026 | 1319 | 1.465020 | CGACTTCTCTCGACTCTGCAC | 60.465 | 57.143 | 0.00 | 0.00 | 35.58 | 4.57 |
1027 | 1320 | 0.799393 | CGACTTCTCTCGACTCTGCA | 59.201 | 55.000 | 0.00 | 0.00 | 35.58 | 4.41 |
1028 | 1321 | 1.080298 | TCGACTTCTCTCGACTCTGC | 58.920 | 55.000 | 0.00 | 0.00 | 37.76 | 4.26 |
1029 | 1322 | 2.034086 | CGATCGACTTCTCTCGACTCTG | 60.034 | 54.545 | 10.26 | 0.00 | 45.14 | 3.35 |
1030 | 1323 | 2.159212 | TCGATCGACTTCTCTCGACTCT | 60.159 | 50.000 | 15.15 | 0.00 | 45.14 | 3.24 |
1031 | 1324 | 2.195096 | TCGATCGACTTCTCTCGACTC | 58.805 | 52.381 | 15.15 | 0.00 | 45.14 | 3.36 |
1032 | 1325 | 2.296831 | TCGATCGACTTCTCTCGACT | 57.703 | 50.000 | 15.15 | 0.00 | 45.14 | 4.18 |
1033 | 1326 | 3.163642 | GATCGATCGACTTCTCTCGAC | 57.836 | 52.381 | 22.06 | 1.01 | 45.14 | 4.20 |
1049 | 1342 | 0.861866 | AGATGTCGTCGTTGCGATCG | 60.862 | 55.000 | 11.69 | 11.69 | 43.07 | 3.69 |
1051 | 1344 | 1.131693 | TGTAGATGTCGTCGTTGCGAT | 59.868 | 47.619 | 0.00 | 0.00 | 43.07 | 4.58 |
1056 | 1349 | 2.031807 | CGATCCTGTAGATGTCGTCGTT | 59.968 | 50.000 | 0.00 | 0.00 | 34.42 | 3.85 |
1062 | 1355 | 1.267261 | CCGGTCGATCCTGTAGATGTC | 59.733 | 57.143 | 0.00 | 0.00 | 34.42 | 3.06 |
1064 | 1357 | 0.039074 | GCCGGTCGATCCTGTAGATG | 60.039 | 60.000 | 1.90 | 0.00 | 34.42 | 2.90 |
1068 | 1361 | 1.514087 | GTTGCCGGTCGATCCTGTA | 59.486 | 57.895 | 1.90 | 0.00 | 0.00 | 2.74 |
1070 | 1363 | 2.885644 | CGTTGCCGGTCGATCCTG | 60.886 | 66.667 | 1.90 | 0.00 | 0.00 | 3.86 |
1084 | 1377 | 1.369625 | GAGAATTCCATGTCGGCGTT | 58.630 | 50.000 | 6.85 | 0.00 | 33.14 | 4.84 |
1161 | 1454 | 1.538876 | TAGGGTTGTGCAGGGCTCT | 60.539 | 57.895 | 0.00 | 0.00 | 0.00 | 4.09 |
1180 | 1473 | 0.902531 | TCCCCTTTGGAGATGTCGAC | 59.097 | 55.000 | 9.11 | 9.11 | 38.61 | 4.20 |
1203 | 1499 | 1.643868 | CGCATGCGTGGTGTTGGTAT | 61.644 | 55.000 | 31.33 | 0.00 | 34.35 | 2.73 |
1229 | 1525 | 4.785453 | GGAACCGCCTGCTCCCAG | 62.785 | 72.222 | 0.00 | 0.00 | 38.85 | 4.45 |
1233 | 1529 | 4.821589 | CTCCGGAACCGCCTGCTC | 62.822 | 72.222 | 5.23 | 0.00 | 38.24 | 4.26 |
1235 | 1531 | 4.162690 | ATCTCCGGAACCGCCTGC | 62.163 | 66.667 | 5.23 | 0.00 | 38.24 | 4.85 |
1278 | 4112 | 3.388841 | GTGGAGGTGTCCCACGAT | 58.611 | 61.111 | 0.00 | 0.00 | 43.80 | 3.73 |
1319 | 4153 | 3.692101 | GTCGATCTTCTCTGAGGTCTGAA | 59.308 | 47.826 | 4.59 | 0.00 | 0.00 | 3.02 |
1329 | 4163 | 2.010582 | GCGGCAGGTCGATCTTCTCT | 62.011 | 60.000 | 0.00 | 0.00 | 0.00 | 3.10 |
1552 | 4395 | 2.117156 | GCATGCTCCTGCCGTTGAT | 61.117 | 57.895 | 11.37 | 0.00 | 38.71 | 2.57 |
1713 | 4559 | 1.079127 | CATGGAGGTGGTCGTGGTC | 60.079 | 63.158 | 0.00 | 0.00 | 0.00 | 4.02 |
1714 | 4560 | 2.592993 | CCATGGAGGTGGTCGTGGT | 61.593 | 63.158 | 5.56 | 0.00 | 34.46 | 4.16 |
1715 | 4561 | 2.268920 | CCATGGAGGTGGTCGTGG | 59.731 | 66.667 | 5.56 | 0.00 | 34.46 | 4.94 |
1716 | 4562 | 2.436646 | GCCATGGAGGTGGTCGTG | 60.437 | 66.667 | 18.40 | 0.00 | 41.47 | 4.35 |
1717 | 4563 | 4.082523 | CGCCATGGAGGTGGTCGT | 62.083 | 66.667 | 18.40 | 0.00 | 44.45 | 4.34 |
1737 | 4583 | 2.405594 | CCGAGCTCGACGAAGGAG | 59.594 | 66.667 | 36.59 | 13.86 | 43.02 | 3.69 |
1773 | 4853 | 1.352156 | CGTAGTGCAAGAAGGCGGTC | 61.352 | 60.000 | 0.00 | 0.00 | 36.28 | 4.79 |
1834 | 4914 | 4.864334 | CCCCGCCATGTCCAGCTC | 62.864 | 72.222 | 0.00 | 0.00 | 0.00 | 4.09 |
1843 | 4923 | 3.411517 | CCACCTCTTCCCCGCCAT | 61.412 | 66.667 | 0.00 | 0.00 | 0.00 | 4.40 |
2006 | 5086 | 1.069765 | CCCTCATTCCCGTCGATGG | 59.930 | 63.158 | 17.27 | 17.27 | 0.00 | 3.51 |
2046 | 5126 | 2.091720 | TGGCCCAGTGATATCTTTGCAT | 60.092 | 45.455 | 0.00 | 0.00 | 0.00 | 3.96 |
2061 | 5144 | 1.064314 | ACCGCATTACTATTTGGCCCA | 60.064 | 47.619 | 0.00 | 0.00 | 0.00 | 5.36 |
2071 | 5154 | 0.253044 | AGCATCCACACCGCATTACT | 59.747 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2109 | 5192 | 8.668510 | ACATTGATAGTAGTTCATTCCATGTC | 57.331 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
2161 | 5252 | 8.160765 | TCCATACAATCAAAACCTCACTAAAGA | 58.839 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2162 | 5253 | 8.237267 | GTCCATACAATCAAAACCTCACTAAAG | 58.763 | 37.037 | 0.00 | 0.00 | 0.00 | 1.85 |
2167 | 5258 | 5.957842 | TGTCCATACAATCAAAACCTCAC | 57.042 | 39.130 | 0.00 | 0.00 | 30.91 | 3.51 |
2168 | 5259 | 6.244654 | TCATGTCCATACAATCAAAACCTCA | 58.755 | 36.000 | 0.00 | 0.00 | 39.58 | 3.86 |
2171 | 5262 | 6.924111 | AGTTCATGTCCATACAATCAAAACC | 58.076 | 36.000 | 0.00 | 0.00 | 39.58 | 3.27 |
2255 | 5347 | 9.788889 | TCTCATCACAGAATATCTTGCAAATAT | 57.211 | 29.630 | 0.00 | 4.65 | 0.00 | 1.28 |
2256 | 5348 | 9.788889 | ATCTCATCACAGAATATCTTGCAAATA | 57.211 | 29.630 | 0.00 | 2.37 | 0.00 | 1.40 |
2257 | 5349 | 8.693120 | ATCTCATCACAGAATATCTTGCAAAT | 57.307 | 30.769 | 0.00 | 0.00 | 0.00 | 2.32 |
2258 | 5350 | 7.771826 | TGATCTCATCACAGAATATCTTGCAAA | 59.228 | 33.333 | 0.00 | 0.00 | 33.59 | 3.68 |
2259 | 5351 | 7.277396 | TGATCTCATCACAGAATATCTTGCAA | 58.723 | 34.615 | 0.00 | 0.00 | 33.59 | 4.08 |
2260 | 5352 | 6.823497 | TGATCTCATCACAGAATATCTTGCA | 58.177 | 36.000 | 0.00 | 0.00 | 33.59 | 4.08 |
2261 | 5353 | 7.725818 | TTGATCTCATCACAGAATATCTTGC | 57.274 | 36.000 | 0.00 | 0.00 | 39.39 | 4.01 |
2287 | 5379 | 9.793259 | TTTTCAAGGTTCAAGTCTGACTATTAT | 57.207 | 29.630 | 11.30 | 0.00 | 0.00 | 1.28 |
2288 | 5380 | 9.793259 | ATTTTCAAGGTTCAAGTCTGACTATTA | 57.207 | 29.630 | 11.30 | 0.00 | 0.00 | 0.98 |
2289 | 5381 | 8.697507 | ATTTTCAAGGTTCAAGTCTGACTATT | 57.302 | 30.769 | 11.30 | 0.00 | 0.00 | 1.73 |
2290 | 5382 | 9.793259 | TTATTTTCAAGGTTCAAGTCTGACTAT | 57.207 | 29.630 | 11.30 | 0.00 | 0.00 | 2.12 |
2291 | 5383 | 9.621629 | TTTATTTTCAAGGTTCAAGTCTGACTA | 57.378 | 29.630 | 11.30 | 0.00 | 0.00 | 2.59 |
2292 | 5384 | 8.406297 | GTTTATTTTCAAGGTTCAAGTCTGACT | 58.594 | 33.333 | 4.06 | 4.06 | 0.00 | 3.41 |
2293 | 5385 | 8.188139 | TGTTTATTTTCAAGGTTCAAGTCTGAC | 58.812 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2294 | 5386 | 8.287439 | TGTTTATTTTCAAGGTTCAAGTCTGA | 57.713 | 30.769 | 0.00 | 0.00 | 0.00 | 3.27 |
2295 | 5387 | 8.405531 | TCTGTTTATTTTCAAGGTTCAAGTCTG | 58.594 | 33.333 | 0.00 | 0.00 | 0.00 | 3.51 |
2296 | 5388 | 8.519799 | TCTGTTTATTTTCAAGGTTCAAGTCT | 57.480 | 30.769 | 0.00 | 0.00 | 0.00 | 3.24 |
2297 | 5389 | 9.750125 | ATTCTGTTTATTTTCAAGGTTCAAGTC | 57.250 | 29.630 | 0.00 | 0.00 | 0.00 | 3.01 |
2302 | 5394 | 9.543018 | CGAGTATTCTGTTTATTTTCAAGGTTC | 57.457 | 33.333 | 0.00 | 0.00 | 0.00 | 3.62 |
2303 | 5395 | 9.280174 | TCGAGTATTCTGTTTATTTTCAAGGTT | 57.720 | 29.630 | 0.00 | 0.00 | 0.00 | 3.50 |
2304 | 5396 | 8.842358 | TCGAGTATTCTGTTTATTTTCAAGGT | 57.158 | 30.769 | 0.00 | 0.00 | 0.00 | 3.50 |
2312 | 5404 | 8.727910 | GGTCCTTTTTCGAGTATTCTGTTTATT | 58.272 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2313 | 5405 | 7.881232 | TGGTCCTTTTTCGAGTATTCTGTTTAT | 59.119 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2314 | 5406 | 7.218614 | TGGTCCTTTTTCGAGTATTCTGTTTA | 58.781 | 34.615 | 0.00 | 0.00 | 0.00 | 2.01 |
2315 | 5407 | 6.059484 | TGGTCCTTTTTCGAGTATTCTGTTT | 58.941 | 36.000 | 0.00 | 0.00 | 0.00 | 2.83 |
2316 | 5408 | 5.617252 | TGGTCCTTTTTCGAGTATTCTGTT | 58.383 | 37.500 | 0.00 | 0.00 | 0.00 | 3.16 |
2317 | 5409 | 5.223449 | TGGTCCTTTTTCGAGTATTCTGT | 57.777 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2318 | 5410 | 5.468746 | TGTTGGTCCTTTTTCGAGTATTCTG | 59.531 | 40.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2319 | 5411 | 5.617252 | TGTTGGTCCTTTTTCGAGTATTCT | 58.383 | 37.500 | 0.00 | 0.00 | 0.00 | 2.40 |
2320 | 5412 | 5.699458 | TCTGTTGGTCCTTTTTCGAGTATTC | 59.301 | 40.000 | 0.00 | 0.00 | 0.00 | 1.75 |
2321 | 5413 | 5.617252 | TCTGTTGGTCCTTTTTCGAGTATT | 58.383 | 37.500 | 0.00 | 0.00 | 0.00 | 1.89 |
2322 | 5414 | 5.223449 | TCTGTTGGTCCTTTTTCGAGTAT | 57.777 | 39.130 | 0.00 | 0.00 | 0.00 | 2.12 |
2323 | 5415 | 4.675976 | TCTGTTGGTCCTTTTTCGAGTA | 57.324 | 40.909 | 0.00 | 0.00 | 0.00 | 2.59 |
2324 | 5416 | 3.553828 | TCTGTTGGTCCTTTTTCGAGT | 57.446 | 42.857 | 0.00 | 0.00 | 0.00 | 4.18 |
2325 | 5417 | 4.515191 | TGATTCTGTTGGTCCTTTTTCGAG | 59.485 | 41.667 | 0.00 | 0.00 | 0.00 | 4.04 |
2326 | 5418 | 4.456535 | TGATTCTGTTGGTCCTTTTTCGA | 58.543 | 39.130 | 0.00 | 0.00 | 0.00 | 3.71 |
2327 | 5419 | 4.829064 | TGATTCTGTTGGTCCTTTTTCG | 57.171 | 40.909 | 0.00 | 0.00 | 0.00 | 3.46 |
2328 | 5420 | 9.196552 | CTATTTTGATTCTGTTGGTCCTTTTTC | 57.803 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
2329 | 5421 | 7.657354 | GCTATTTTGATTCTGTTGGTCCTTTTT | 59.343 | 33.333 | 0.00 | 0.00 | 0.00 | 1.94 |
2330 | 5422 | 7.015584 | AGCTATTTTGATTCTGTTGGTCCTTTT | 59.984 | 33.333 | 0.00 | 0.00 | 0.00 | 2.27 |
2331 | 5423 | 6.494835 | AGCTATTTTGATTCTGTTGGTCCTTT | 59.505 | 34.615 | 0.00 | 0.00 | 0.00 | 3.11 |
2332 | 5424 | 6.012745 | AGCTATTTTGATTCTGTTGGTCCTT | 58.987 | 36.000 | 0.00 | 0.00 | 0.00 | 3.36 |
2333 | 5425 | 5.416952 | CAGCTATTTTGATTCTGTTGGTCCT | 59.583 | 40.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2334 | 5426 | 5.415701 | TCAGCTATTTTGATTCTGTTGGTCC | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 4.46 |
2335 | 5427 | 6.500684 | TCAGCTATTTTGATTCTGTTGGTC | 57.499 | 37.500 | 0.00 | 0.00 | 0.00 | 4.02 |
2336 | 5428 | 6.716628 | TCTTCAGCTATTTTGATTCTGTTGGT | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
2337 | 5429 | 7.149569 | TCTTCAGCTATTTTGATTCTGTTGG | 57.850 | 36.000 | 0.00 | 0.00 | 0.00 | 3.77 |
2338 | 5430 | 7.540055 | GGTTCTTCAGCTATTTTGATTCTGTTG | 59.460 | 37.037 | 0.00 | 0.00 | 0.00 | 3.33 |
2339 | 5431 | 7.231317 | TGGTTCTTCAGCTATTTTGATTCTGTT | 59.769 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
2340 | 5432 | 6.716628 | TGGTTCTTCAGCTATTTTGATTCTGT | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2341 | 5433 | 7.025963 | GTGGTTCTTCAGCTATTTTGATTCTG | 58.974 | 38.462 | 0.00 | 0.00 | 0.00 | 3.02 |
2342 | 5434 | 6.716628 | TGTGGTTCTTCAGCTATTTTGATTCT | 59.283 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
2343 | 5435 | 6.913170 | TGTGGTTCTTCAGCTATTTTGATTC | 58.087 | 36.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2344 | 5436 | 6.899393 | TGTGGTTCTTCAGCTATTTTGATT | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2345 | 5437 | 6.899393 | TTGTGGTTCTTCAGCTATTTTGAT | 57.101 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
2346 | 5438 | 6.707440 | TTTGTGGTTCTTCAGCTATTTTGA | 57.293 | 33.333 | 0.00 | 0.00 | 0.00 | 2.69 |
2352 | 5444 | 9.679661 | TGAATTATATTTGTGGTTCTTCAGCTA | 57.320 | 29.630 | 0.00 | 0.00 | 0.00 | 3.32 |
2353 | 5445 | 8.579850 | TGAATTATATTTGTGGTTCTTCAGCT | 57.420 | 30.769 | 0.00 | 0.00 | 0.00 | 4.24 |
2354 | 5446 | 8.677300 | TCTGAATTATATTTGTGGTTCTTCAGC | 58.323 | 33.333 | 0.00 | 0.00 | 37.85 | 4.26 |
2406 | 5498 | 8.920665 | CGCTAGATTTAGATGTGAATCCTTAAG | 58.079 | 37.037 | 4.00 | 0.00 | 33.72 | 1.85 |
2425 | 5518 | 5.646577 | AATAAGATCTAACGGCGCTAGAT | 57.353 | 39.130 | 27.41 | 27.41 | 38.54 | 1.98 |
2593 | 5687 | 1.086696 | CCACCGTACAATGAAGCCTG | 58.913 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2594 | 5688 | 0.690762 | ACCACCGTACAATGAAGCCT | 59.309 | 50.000 | 0.00 | 0.00 | 0.00 | 4.58 |
2725 | 5835 | 1.007038 | TACAACCCACTCGTCGCAC | 60.007 | 57.895 | 0.00 | 0.00 | 0.00 | 5.34 |
2930 | 6042 | 1.086696 | ACCCACGATCAAGATTTGCG | 58.913 | 50.000 | 0.00 | 0.00 | 0.00 | 4.85 |
3011 | 6123 | 5.643379 | ATGTTCCAATAAAAGACGCACAT | 57.357 | 34.783 | 0.00 | 0.00 | 0.00 | 3.21 |
3047 | 6159 | 1.686115 | CCTATCCAAAACAGGCCCAGG | 60.686 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.