Multiple sequence alignment - TraesCS5B01G505700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G505700 chr5B 100.000 4065 0 0 1 4065 671342356 671338292 0.000000e+00 7507.0
1 TraesCS5B01G505700 chr5B 86.250 320 20 5 3586 3882 467949753 467949435 3.920000e-85 326.0
2 TraesCS5B01G505700 chr5B 85.489 317 22 6 3586 3879 586282339 586282024 3.950000e-80 309.0
3 TraesCS5B01G505700 chr5B 72.806 695 151 28 1441 2118 671503150 671503823 6.890000e-48 202.0
4 TraesCS5B01G505700 chr5B 81.982 111 10 6 180 280 671342093 671341983 7.240000e-13 86.1
5 TraesCS5B01G505700 chr5B 81.982 111 10 6 264 374 671342177 671342077 7.240000e-13 86.1
6 TraesCS5B01G505700 chr5B 100.000 32 0 0 3244 3275 671300834 671300803 4.390000e-05 60.2
7 TraesCS5B01G505700 chr4A 94.874 3531 133 17 1 3496 640055276 640058793 0.000000e+00 5474.0
8 TraesCS5B01G505700 chr4A 73.339 1114 234 45 1021 2118 637200922 637199856 1.800000e-93 353.0
9 TraesCS5B01G505700 chr4A 78.481 474 66 22 2476 2946 640102180 640102620 1.110000e-70 278.0
10 TraesCS5B01G505700 chr4A 76.230 488 93 6 1695 2176 640101457 640101927 1.890000e-58 237.0
11 TraesCS5B01G505700 chr4A 81.982 111 9 7 180 280 640055537 640055646 2.600000e-12 84.2
12 TraesCS5B01G505700 chr4A 93.478 46 1 1 4020 4065 584409265 584409308 2.620000e-07 67.6
13 TraesCS5B01G505700 chr5D 76.262 2001 306 96 1023 2946 532248782 532246874 0.000000e+00 907.0
14 TraesCS5B01G505700 chr5D 85.127 316 25 11 3586 3879 481804128 481803813 1.840000e-78 303.0
15 TraesCS5B01G505700 chr5D 76.218 513 91 21 1021 1528 532284543 532284057 4.060000e-60 243.0
16 TraesCS5B01G505700 chr5D 100.000 38 0 0 4028 4065 135058273 135058310 2.030000e-08 71.3
17 TraesCS5B01G505700 chr5D 96.970 33 1 0 3247 3279 532246546 532246514 5.680000e-04 56.5
18 TraesCS5B01G505700 chr1D 88.013 317 22 7 3585 3886 36547080 36546765 1.070000e-95 361.0
19 TraesCS5B01G505700 chr1A 86.834 319 18 10 3586 3881 562776201 562776518 6.510000e-88 335.0
20 TraesCS5B01G505700 chr1A 84.795 342 18 20 3584 3893 103682577 103682238 3.050000e-81 313.0
21 TraesCS5B01G505700 chr1A 97.674 43 1 0 4023 4065 587678730 587678772 1.570000e-09 75.0
22 TraesCS5B01G505700 chr5A 86.709 316 20 12 3586 3879 385416079 385416394 8.420000e-87 331.0
23 TraesCS5B01G505700 chr5A 85.443 316 24 11 3586 3879 561672390 561672705 3.950000e-80 309.0
24 TraesCS5B01G505700 chr5A 84.277 318 25 7 3586 3880 640430654 640430969 1.850000e-73 287.0
25 TraesCS5B01G505700 chr5A 81.061 132 23 2 234 365 84122071 84122200 2.000000e-18 104.0
26 TraesCS5B01G505700 chr4D 86.645 307 19 13 3588 3872 7927920 7927614 1.820000e-83 320.0
27 TraesCS5B01G505700 chr4D 83.392 283 22 10 3621 3880 493331946 493331666 5.250000e-59 239.0
28 TraesCS5B01G505700 chr6B 85.804 317 21 8 3586 3879 524969310 524969625 8.480000e-82 315.0
29 TraesCS5B01G505700 chr6A 85.580 319 22 6 3586 3881 222491114 222490797 3.050000e-81 313.0
30 TraesCS5B01G505700 chr1B 86.572 283 19 14 3586 3850 95371243 95371524 1.100000e-75 294.0
31 TraesCS5B01G505700 chr1B 76.092 435 96 6 1843 2273 22109574 22110004 1.900000e-53 220.0
32 TraesCS5B01G505700 chr1B 94.656 131 7 0 3013 3143 36945887 36946017 1.920000e-48 204.0
33 TraesCS5B01G505700 chr1B 94.656 131 7 0 3013 3143 565902411 565902281 1.920000e-48 204.0
34 TraesCS5B01G505700 chr1B 83.133 166 26 2 1843 2007 22839219 22839383 2.530000e-32 150.0
35 TraesCS5B01G505700 chr1B 97.619 42 0 1 4025 4065 669822418 669822459 2.030000e-08 71.3
36 TraesCS5B01G505700 chr1B 91.304 46 2 1 3134 3177 565902270 565902225 1.220000e-05 62.1
37 TraesCS5B01G505700 chr4B 83.648 318 28 11 3586 3881 636034825 636034510 1.110000e-70 278.0
38 TraesCS5B01G505700 chr3A 83.737 289 23 7 3614 3879 454161173 454160886 6.740000e-63 252.0
39 TraesCS5B01G505700 chr3A 95.349 43 2 0 4023 4065 55227724 55227766 7.290000e-08 69.4
40 TraesCS5B01G505700 chr7A 71.905 1139 212 67 1022 2137 729354297 729355350 8.790000e-57 231.0
41 TraesCS5B01G505700 chr7B 95.420 131 6 0 3013 3143 572533063 572533193 4.120000e-50 209.0
42 TraesCS5B01G505700 chr7B 94.656 131 7 0 3013 3143 27321377 27321247 1.920000e-48 204.0
43 TraesCS5B01G505700 chr7B 73.457 486 100 19 1660 2129 739417659 739418131 5.440000e-34 156.0
44 TraesCS5B01G505700 chr7B 72.270 577 129 21 1570 2129 739413871 739414433 2.530000e-32 150.0
45 TraesCS5B01G505700 chr7B 93.478 46 1 2 4022 4065 19273883 19273928 2.620000e-07 67.6
46 TraesCS5B01G505700 chr7B 91.304 46 2 1 3134 3177 27321236 27321191 1.220000e-05 62.1
47 TraesCS5B01G505700 chr7B 93.023 43 1 1 3134 3174 572533204 572533246 1.220000e-05 62.1
48 TraesCS5B01G505700 chr3B 95.420 131 6 0 3013 3143 740527248 740527378 4.120000e-50 209.0
49 TraesCS5B01G505700 chr3B 92.366 131 10 0 3013 3143 103551243 103551373 1.930000e-43 187.0
50 TraesCS5B01G505700 chr3B 90.972 144 4 5 3874 4013 103551524 103551662 6.940000e-43 185.0
51 TraesCS5B01G505700 chr3B 93.023 43 1 1 3134 3174 103551384 103551426 1.220000e-05 62.1
52 TraesCS5B01G505700 chr3B 93.023 43 1 1 3134 3174 740527389 740527431 1.220000e-05 62.1
53 TraesCS5B01G505700 chr2A 84.337 166 26 0 371 536 53925708 53925873 3.250000e-36 163.0
54 TraesCS5B01G505700 chr2A 100.000 36 0 0 4030 4065 148848067 148848032 2.620000e-07 67.6
55 TraesCS5B01G505700 chr6D 100.000 38 0 0 4028 4065 48086573 48086536 2.030000e-08 71.3
56 TraesCS5B01G505700 chr2B 100.000 38 0 0 4028 4065 596101488 596101451 2.030000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G505700 chr5B 671338292 671342356 4064 True 2559.733333 7507 87.9880 1 4065 3 chr5B.!!$R4 4064
1 TraesCS5B01G505700 chr5B 671503150 671503823 673 False 202.000000 202 72.8060 1441 2118 1 chr5B.!!$F1 677
2 TraesCS5B01G505700 chr4A 640055276 640058793 3517 False 2779.100000 5474 88.4280 1 3496 2 chr4A.!!$F2 3495
3 TraesCS5B01G505700 chr4A 637199856 637200922 1066 True 353.000000 353 73.3390 1021 2118 1 chr4A.!!$R1 1097
4 TraesCS5B01G505700 chr4A 640101457 640102620 1163 False 257.500000 278 77.3555 1695 2946 2 chr4A.!!$F3 1251
5 TraesCS5B01G505700 chr5D 532246514 532248782 2268 True 481.750000 907 86.6160 1023 3279 2 chr5D.!!$R3 2256
6 TraesCS5B01G505700 chr7A 729354297 729355350 1053 False 231.000000 231 71.9050 1022 2137 1 chr7A.!!$F1 1115

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
661 666 0.458025 CAGAGGGCGAGGTTTACGAC 60.458 60.0 0.0 0.0 38.12 4.34 F
2268 2306 1.231963 ACAAGGAGGGGGACTTTGTT 58.768 50.0 0.0 0.0 0.00 2.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2644 2734 0.108329 ACGGATAAACTGCGGAGTGG 60.108 55.0 11.44 0.00 43.91 4.00 R
3871 4070 0.039978 CTATGCACCGACGGAGCTAG 60.040 60.0 31.53 24.73 39.93 3.42 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
38 39 4.529219 CTGGCGTGCGGCTCCATA 62.529 66.667 18.31 0.00 42.94 2.74
69 70 1.120437 CGCGGCAAGAAAACTTCAAC 58.880 50.000 0.00 0.00 0.00 3.18
70 71 1.120437 GCGGCAAGAAAACTTCAACG 58.880 50.000 0.00 0.00 0.00 4.10
71 72 1.120437 CGGCAAGAAAACTTCAACGC 58.880 50.000 0.00 0.00 0.00 4.84
72 73 1.532921 CGGCAAGAAAACTTCAACGCA 60.533 47.619 0.00 0.00 0.00 5.24
132 133 1.816679 CAGCGCTCTATTGCAGCCA 60.817 57.895 7.13 0.00 34.72 4.75
134 135 2.108514 GCGCTCTATTGCAGCCACA 61.109 57.895 0.00 0.00 32.83 4.17
136 137 1.726265 GCTCTATTGCAGCCACAGC 59.274 57.895 0.00 0.00 40.32 4.40
137 138 1.028330 GCTCTATTGCAGCCACAGCA 61.028 55.000 0.00 0.00 43.56 4.41
165 167 1.008875 TTGCAACTCTAGCACGCGAG 61.009 55.000 15.93 5.97 42.54 5.03
168 170 1.263776 CAACTCTAGCACGCGAGAAG 58.736 55.000 15.93 6.55 0.00 2.85
305 307 3.699894 CCTCCTCCTGCGTGCTGT 61.700 66.667 0.00 0.00 0.00 4.40
307 309 3.231889 CTCCTCCTGCGTGCTGTGT 62.232 63.158 0.00 0.00 0.00 3.72
397 399 3.357079 CAGCTGGTGGTTGCGACC 61.357 66.667 17.01 17.01 46.71 4.79
417 422 2.331893 CCCTCATTCGCGGCAACAA 61.332 57.895 6.13 0.00 0.00 2.83
459 464 4.657824 AGGCGGTGGTTGTCGTCG 62.658 66.667 0.00 0.00 36.00 5.12
478 483 3.854669 CCCTCCCGATTCGCAGCT 61.855 66.667 0.00 0.00 0.00 4.24
483 488 2.434884 CCGATTCGCAGCTGTGGT 60.435 61.111 26.23 15.68 0.00 4.16
532 537 0.749649 CTCCCCTCTCGGATGTGAAG 59.250 60.000 0.00 0.00 0.00 3.02
536 541 1.550524 CCCTCTCGGATGTGAAGAACA 59.449 52.381 0.00 0.00 44.79 3.18
564 569 2.224450 GGGGAAAGGAAAGAGACGAACA 60.224 50.000 0.00 0.00 0.00 3.18
565 570 2.806818 GGGAAAGGAAAGAGACGAACAC 59.193 50.000 0.00 0.00 0.00 3.32
645 650 4.357947 GGGCACGTGTCGAGCAGA 62.358 66.667 18.38 0.00 44.45 4.26
648 653 2.126307 CACGTGTCGAGCAGAGGG 60.126 66.667 7.58 0.00 0.00 4.30
659 664 1.810030 GCAGAGGGCGAGGTTTACG 60.810 63.158 0.00 0.00 0.00 3.18
661 666 0.458025 CAGAGGGCGAGGTTTACGAC 60.458 60.000 0.00 0.00 38.12 4.34
675 680 5.186021 AGGTTTACGACATGAGAGATCAGTT 59.814 40.000 0.00 0.00 0.00 3.16
695 700 6.752815 TCAGTTGGTTGGAAATAAACGTTTTC 59.247 34.615 20.19 10.67 31.65 2.29
821 826 1.670811 AGTGTCTTTTCACGTGCCAAG 59.329 47.619 11.67 14.68 42.40 3.61
831 836 1.657094 CACGTGCCAAGTAATACCGTC 59.343 52.381 0.82 0.00 0.00 4.79
870 875 4.403734 GGTAGTGTTGGGAAGGAAATTCA 58.596 43.478 0.00 0.00 39.91 2.57
876 881 3.893753 TGGGAAGGAAATTCAGAACCA 57.106 42.857 0.00 0.00 39.91 3.67
1019 1024 3.009473 ACCATGGCAGTAGAGTTGTTGAT 59.991 43.478 13.04 0.00 0.00 2.57
1230 1236 2.699846 GAGCATCTCAGACTTCATCCCT 59.300 50.000 0.00 0.00 0.00 4.20
1256 1262 5.452496 CCACAATATCGTCCTTCTCACTCAT 60.452 44.000 0.00 0.00 0.00 2.90
1560 1566 1.813178 ACTGATGACGACACTGACGAT 59.187 47.619 7.91 0.00 34.70 3.73
1629 1638 1.300971 GCGAGCTGACCTCATTGCAA 61.301 55.000 0.00 0.00 40.78 4.08
1802 1826 3.696051 GACCAATGTAACATCATGCTGGT 59.304 43.478 1.02 0.00 39.88 4.00
1834 1858 5.411669 GGTGGACTAGGTGTTAATGAAGTTG 59.588 44.000 0.00 0.00 0.00 3.16
2098 2134 6.873076 TCATGGCTTTTGTAATTTGATTCCAC 59.127 34.615 0.00 0.00 0.00 4.02
2268 2306 1.231963 ACAAGGAGGGGGACTTTGTT 58.768 50.000 0.00 0.00 0.00 2.83
2277 2315 3.401342 AGGGGGACTTTGTTAACATCCTT 59.599 43.478 20.76 8.87 0.00 3.36
2366 2426 9.553064 TTTGTGTGGAAAATAAATTGCAAGTAT 57.447 25.926 4.94 2.37 32.21 2.12
2411 2474 1.544724 TGTTCTAACATGCCCCTTGC 58.455 50.000 0.00 0.00 35.51 4.01
2504 2586 5.008019 AGTGTGTTGCTGTTTGAGATGTTAG 59.992 40.000 0.00 0.00 0.00 2.34
2590 2680 5.235850 TCAAAGTTCAGGTACCATGCTAA 57.764 39.130 15.94 0.00 0.00 3.09
2599 2689 5.070446 TCAGGTACCATGCTAATCTACTTGG 59.930 44.000 15.94 0.00 37.19 3.61
2644 2734 8.414778 AGTACTGGCTAGTTACAAATATCTCAC 58.585 37.037 8.46 0.00 38.36 3.51
2650 2740 6.702282 GCTAGTTACAAATATCTCACCACTCC 59.298 42.308 0.00 0.00 0.00 3.85
2660 2750 2.094182 TCTCACCACTCCGCAGTTTATC 60.094 50.000 0.00 0.00 0.00 1.75
2674 2764 7.228507 TCCGCAGTTTATCCGTATAGTACTTTA 59.771 37.037 0.00 0.00 0.00 1.85
2675 2765 7.324616 CCGCAGTTTATCCGTATAGTACTTTAC 59.675 40.741 12.09 12.09 0.00 2.01
2676 2766 8.072567 CGCAGTTTATCCGTATAGTACTTTACT 58.927 37.037 17.80 5.73 42.68 2.24
2677 2767 9.741647 GCAGTTTATCCGTATAGTACTTTACTT 57.258 33.333 17.80 8.13 40.14 2.24
2736 2826 3.503748 GGCAGTCAACAGAACAAAGCTAT 59.496 43.478 0.00 0.00 0.00 2.97
2738 2828 4.453819 GCAGTCAACAGAACAAAGCTATCT 59.546 41.667 0.00 0.00 0.00 1.98
2758 2848 3.138304 CTCCTTGTGTCGTCAAATTGGA 58.862 45.455 0.00 0.00 0.00 3.53
2824 2914 7.387948 ACAGTAACTTTCTGCCTTGTGTTATAG 59.612 37.037 0.00 0.00 36.50 1.31
2873 2965 3.245586 TGCCTTTATTGTCAGGGTTCCAT 60.246 43.478 0.00 0.00 0.00 3.41
2874 2966 3.381590 GCCTTTATTGTCAGGGTTCCATC 59.618 47.826 0.00 0.00 0.00 3.51
2875 2967 4.599041 CCTTTATTGTCAGGGTTCCATCA 58.401 43.478 0.00 0.00 0.00 3.07
2898 2990 0.178992 TGTGGGGAAGTTGCTCCAAG 60.179 55.000 6.23 0.00 37.20 3.61
2922 3014 3.477504 CCAGCACGGTCAACAAATG 57.522 52.632 0.00 0.00 0.00 2.32
2971 3063 2.115291 GGCGTCTGATCCTTTGGGC 61.115 63.158 0.00 0.00 0.00 5.36
2989 3081 1.296392 CGATGTCCCCAAGAGTGCA 59.704 57.895 0.00 0.00 0.00 4.57
3022 3114 5.654650 AGAATCCGTGAAGAGTTCAGATAGT 59.345 40.000 0.00 0.00 41.01 2.12
3037 3129 7.497249 AGTTCAGATAGTATCAACAAAGATGGC 59.503 37.037 12.66 0.00 0.00 4.40
3084 3176 1.400846 GCAGTGTTGATGATGCTCCAG 59.599 52.381 0.00 0.00 35.78 3.86
3089 3181 2.743664 TGTTGATGATGCTCCAGTTTCG 59.256 45.455 0.00 0.00 0.00 3.46
3132 3245 4.514781 TGTGTTCTACATACTCGCAACT 57.485 40.909 0.00 0.00 33.42 3.16
3139 3252 0.176680 CATACTCGCAACTCAGGGCT 59.823 55.000 0.00 0.00 0.00 5.19
3143 3256 3.730761 CGCAACTCAGGGCTGCAC 61.731 66.667 0.50 0.00 35.78 4.57
3214 3356 9.807649 ATGTATGGAATAATTTCTCAAACAAGC 57.192 29.630 0.00 0.00 32.16 4.01
3216 3358 6.662865 TGGAATAATTTCTCAAACAAGCCA 57.337 33.333 0.00 0.00 32.16 4.75
3298 3492 6.317140 AGTTTGCTGTGTGGACATATATCTTG 59.683 38.462 0.00 0.00 0.00 3.02
3322 3520 7.895759 TGAACTATCACCATCATTCGATATGA 58.104 34.615 11.09 11.09 33.00 2.15
3365 3564 7.867752 TGTTTTCCTAATGTTTACAGTAGTGC 58.132 34.615 14.13 3.29 41.44 4.40
3373 3572 3.185594 TGTTTACAGTAGTGCGCATTGTC 59.814 43.478 15.91 7.61 0.00 3.18
3382 3581 1.068610 GTGCGCATTGTCCAGCTTTAA 60.069 47.619 15.91 0.00 0.00 1.52
3383 3582 1.199789 TGCGCATTGTCCAGCTTTAAG 59.800 47.619 5.66 0.00 0.00 1.85
3410 3609 1.441738 TCGTGGATGATGTTGCACAG 58.558 50.000 0.00 0.00 37.77 3.66
3438 3637 2.158971 GGGAACTTTTGCTTGCTCCAAA 60.159 45.455 0.00 0.00 0.00 3.28
3465 3664 2.281517 TGTTTGTGAACGTGTACCTGG 58.718 47.619 0.00 0.00 38.65 4.45
3475 3674 1.303236 TGTACCTGGTGCCATGTGC 60.303 57.895 10.23 8.23 41.77 4.57
3489 3688 1.266718 CATGTGCCAGTTACACCACAC 59.733 52.381 5.25 0.00 40.55 3.82
3492 3691 1.071071 GTGCCAGTTACACCACACCTA 59.929 52.381 0.00 0.00 31.67 3.08
3496 3695 3.439129 GCCAGTTACACCACACCTATTTC 59.561 47.826 0.00 0.00 0.00 2.17
3497 3696 4.806286 GCCAGTTACACCACACCTATTTCT 60.806 45.833 0.00 0.00 0.00 2.52
3498 3697 5.570034 GCCAGTTACACCACACCTATTTCTA 60.570 44.000 0.00 0.00 0.00 2.10
3499 3698 5.873164 CCAGTTACACCACACCTATTTCTAC 59.127 44.000 0.00 0.00 0.00 2.59
3500 3699 6.460781 CAGTTACACCACACCTATTTCTACA 58.539 40.000 0.00 0.00 0.00 2.74
3501 3700 6.932400 CAGTTACACCACACCTATTTCTACAA 59.068 38.462 0.00 0.00 0.00 2.41
3502 3701 7.606456 CAGTTACACCACACCTATTTCTACAAT 59.394 37.037 0.00 0.00 0.00 2.71
3503 3702 8.161425 AGTTACACCACACCTATTTCTACAATT 58.839 33.333 0.00 0.00 0.00 2.32
3504 3703 9.439500 GTTACACCACACCTATTTCTACAATTA 57.561 33.333 0.00 0.00 0.00 1.40
3505 3704 7.916914 ACACCACACCTATTTCTACAATTAC 57.083 36.000 0.00 0.00 0.00 1.89
3506 3705 7.455058 ACACCACACCTATTTCTACAATTACA 58.545 34.615 0.00 0.00 0.00 2.41
3507 3706 7.606456 ACACCACACCTATTTCTACAATTACAG 59.394 37.037 0.00 0.00 0.00 2.74
3508 3707 7.606456 CACCACACCTATTTCTACAATTACAGT 59.394 37.037 0.00 0.00 0.00 3.55
3509 3708 8.818860 ACCACACCTATTTCTACAATTACAGTA 58.181 33.333 0.00 0.00 0.00 2.74
3510 3709 9.661563 CCACACCTATTTCTACAATTACAGTAA 57.338 33.333 0.00 0.00 0.00 2.24
3512 3711 9.362539 ACACCTATTTCTACAATTACAGTAACG 57.637 33.333 0.00 0.00 0.00 3.18
3513 3712 8.814235 CACCTATTTCTACAATTACAGTAACGG 58.186 37.037 0.00 0.00 0.00 4.44
3514 3713 8.534496 ACCTATTTCTACAATTACAGTAACGGT 58.466 33.333 0.00 0.00 0.00 4.83
3515 3714 9.374838 CCTATTTCTACAATTACAGTAACGGTT 57.625 33.333 0.00 0.00 0.00 4.44
3520 3719 9.926158 TTCTACAATTACAGTAACGGTTATTCA 57.074 29.630 3.59 0.00 0.00 2.57
3521 3720 9.577110 TCTACAATTACAGTAACGGTTATTCAG 57.423 33.333 3.59 0.00 0.00 3.02
3522 3721 7.068692 ACAATTACAGTAACGGTTATTCAGC 57.931 36.000 3.59 0.00 0.00 4.26
3523 3722 6.651643 ACAATTACAGTAACGGTTATTCAGCA 59.348 34.615 3.59 0.00 0.00 4.41
3524 3723 6.657836 ATTACAGTAACGGTTATTCAGCAC 57.342 37.500 3.59 0.00 0.00 4.40
3525 3724 4.267349 ACAGTAACGGTTATTCAGCACT 57.733 40.909 3.59 0.00 0.00 4.40
3526 3725 4.638304 ACAGTAACGGTTATTCAGCACTT 58.362 39.130 3.59 0.00 0.00 3.16
3527 3726 4.689345 ACAGTAACGGTTATTCAGCACTTC 59.311 41.667 3.59 0.00 0.00 3.01
3528 3727 4.929808 CAGTAACGGTTATTCAGCACTTCT 59.070 41.667 3.59 0.00 0.00 2.85
3529 3728 4.929808 AGTAACGGTTATTCAGCACTTCTG 59.070 41.667 3.59 0.00 44.21 3.02
3530 3729 3.402628 ACGGTTATTCAGCACTTCTGT 57.597 42.857 0.00 0.00 43.32 3.41
3531 3730 4.530710 ACGGTTATTCAGCACTTCTGTA 57.469 40.909 0.00 0.00 43.32 2.74
3532 3731 5.086104 ACGGTTATTCAGCACTTCTGTAT 57.914 39.130 0.00 0.00 43.32 2.29
3533 3732 6.216801 ACGGTTATTCAGCACTTCTGTATA 57.783 37.500 0.00 0.00 43.32 1.47
3534 3733 6.817184 ACGGTTATTCAGCACTTCTGTATAT 58.183 36.000 0.00 0.00 43.32 0.86
3535 3734 7.948357 ACGGTTATTCAGCACTTCTGTATATA 58.052 34.615 0.00 0.00 43.32 0.86
3536 3735 8.585881 ACGGTTATTCAGCACTTCTGTATATAT 58.414 33.333 0.00 0.00 43.32 0.86
3537 3736 9.424319 CGGTTATTCAGCACTTCTGTATATATT 57.576 33.333 0.00 0.00 43.32 1.28
3553 3752 9.935682 CTGTATATATTTTCTCATTGTTTGCGT 57.064 29.630 0.00 0.00 0.00 5.24
3554 3753 9.929722 TGTATATATTTTCTCATTGTTTGCGTC 57.070 29.630 0.00 0.00 0.00 5.19
3557 3756 4.630894 TTTTCTCATTGTTTGCGTCTGT 57.369 36.364 0.00 0.00 0.00 3.41
3558 3757 3.878086 TTCTCATTGTTTGCGTCTGTC 57.122 42.857 0.00 0.00 0.00 3.51
3559 3758 2.832563 TCTCATTGTTTGCGTCTGTCA 58.167 42.857 0.00 0.00 0.00 3.58
3560 3759 2.543848 TCTCATTGTTTGCGTCTGTCAC 59.456 45.455 0.00 0.00 0.00 3.67
3568 3767 3.268986 CGTCTGTCACGCTCCTCT 58.731 61.111 0.00 0.00 42.87 3.69
3569 3768 1.581954 CGTCTGTCACGCTCCTCTT 59.418 57.895 0.00 0.00 42.87 2.85
3570 3769 0.730834 CGTCTGTCACGCTCCTCTTG 60.731 60.000 0.00 0.00 42.87 3.02
3571 3770 0.598562 GTCTGTCACGCTCCTCTTGA 59.401 55.000 0.00 0.00 0.00 3.02
3572 3771 1.000163 GTCTGTCACGCTCCTCTTGAA 60.000 52.381 0.00 0.00 0.00 2.69
3573 3772 1.270826 TCTGTCACGCTCCTCTTGAAG 59.729 52.381 0.00 0.00 0.00 3.02
3574 3773 0.319900 TGTCACGCTCCTCTTGAAGC 60.320 55.000 0.00 0.00 0.00 3.86
3575 3774 1.016653 GTCACGCTCCTCTTGAAGCC 61.017 60.000 0.00 0.00 0.00 4.35
3576 3775 1.743252 CACGCTCCTCTTGAAGCCC 60.743 63.158 0.00 0.00 0.00 5.19
3577 3776 1.915769 ACGCTCCTCTTGAAGCCCT 60.916 57.895 0.00 0.00 0.00 5.19
3578 3777 1.153469 CGCTCCTCTTGAAGCCCTC 60.153 63.158 0.00 0.00 0.00 4.30
3579 3778 1.153469 GCTCCTCTTGAAGCCCTCG 60.153 63.158 0.00 0.00 0.00 4.63
3580 3779 1.519719 CTCCTCTTGAAGCCCTCGG 59.480 63.158 0.00 0.00 0.00 4.63
3581 3780 1.229209 TCCTCTTGAAGCCCTCGGT 60.229 57.895 0.00 0.00 0.00 4.69
3582 3781 1.078848 CCTCTTGAAGCCCTCGGTG 60.079 63.158 0.00 0.00 0.00 4.94
3583 3782 1.743252 CTCTTGAAGCCCTCGGTGC 60.743 63.158 0.00 0.00 0.00 5.01
3584 3783 2.032528 CTTGAAGCCCTCGGTGCA 59.967 61.111 0.00 0.00 0.00 4.57
3585 3784 2.032528 TTGAAGCCCTCGGTGCAG 59.967 61.111 0.00 0.00 0.00 4.41
3586 3785 3.551496 TTGAAGCCCTCGGTGCAGG 62.551 63.158 0.00 0.00 0.00 4.85
3587 3786 3.706373 GAAGCCCTCGGTGCAGGA 61.706 66.667 0.00 0.00 35.20 3.86
3588 3787 3.672295 GAAGCCCTCGGTGCAGGAG 62.672 68.421 7.57 7.57 35.20 3.69
3595 3794 4.899239 CGGTGCAGGAGCCGGATC 62.899 72.222 12.38 12.38 43.85 3.36
3596 3795 4.554036 GGTGCAGGAGCCGGATCC 62.554 72.222 31.74 31.74 41.13 3.36
3603 3802 3.135027 GGAGCCGGATCCTCTAACT 57.865 57.895 31.54 1.05 36.35 2.24
3604 3803 1.415200 GGAGCCGGATCCTCTAACTT 58.585 55.000 31.54 0.00 36.35 2.66
3605 3804 2.595238 GGAGCCGGATCCTCTAACTTA 58.405 52.381 31.54 0.00 36.35 2.24
3606 3805 2.559231 GGAGCCGGATCCTCTAACTTAG 59.441 54.545 31.54 0.00 36.35 2.18
3607 3806 3.488363 GAGCCGGATCCTCTAACTTAGA 58.512 50.000 9.02 0.00 0.00 2.10
3620 3819 6.837471 TCTAACTTAGAGAAGGGAAGTCAC 57.163 41.667 0.00 0.00 36.95 3.67
3621 3820 4.522722 AACTTAGAGAAGGGAAGTCACG 57.477 45.455 0.00 0.00 36.95 4.35
3622 3821 2.826725 ACTTAGAGAAGGGAAGTCACGG 59.173 50.000 0.00 0.00 36.95 4.94
3623 3822 2.599408 TAGAGAAGGGAAGTCACGGT 57.401 50.000 0.00 0.00 0.00 4.83
3624 3823 0.969894 AGAGAAGGGAAGTCACGGTG 59.030 55.000 0.56 0.56 0.00 4.94
3625 3824 0.670854 GAGAAGGGAAGTCACGGTGC 60.671 60.000 2.51 0.00 0.00 5.01
3626 3825 1.122019 AGAAGGGAAGTCACGGTGCT 61.122 55.000 2.51 1.17 0.00 4.40
3627 3826 0.606604 GAAGGGAAGTCACGGTGCTA 59.393 55.000 2.51 0.00 0.00 3.49
3628 3827 0.320697 AAGGGAAGTCACGGTGCTAC 59.679 55.000 2.51 0.00 0.00 3.58
3629 3828 0.830444 AGGGAAGTCACGGTGCTACA 60.830 55.000 2.51 0.00 0.00 2.74
3630 3829 0.389948 GGGAAGTCACGGTGCTACAG 60.390 60.000 2.51 0.00 0.00 2.74
3631 3830 0.317479 GGAAGTCACGGTGCTACAGT 59.683 55.000 2.51 0.00 0.00 3.55
3632 3831 1.419374 GAAGTCACGGTGCTACAGTG 58.581 55.000 2.51 11.31 43.97 3.66
3633 3832 0.600255 AAGTCACGGTGCTACAGTGC 60.600 55.000 2.51 8.94 42.66 4.40
3634 3833 1.006102 GTCACGGTGCTACAGTGCT 60.006 57.895 2.51 0.00 42.66 4.40
3635 3834 0.600255 GTCACGGTGCTACAGTGCTT 60.600 55.000 2.51 0.00 42.66 3.91
3636 3835 0.599991 TCACGGTGCTACAGTGCTTG 60.600 55.000 2.51 0.00 42.66 4.01
3637 3836 0.880278 CACGGTGCTACAGTGCTTGT 60.880 55.000 0.00 0.33 37.47 3.16
3638 3837 0.600255 ACGGTGCTACAGTGCTTGTC 60.600 55.000 0.00 0.00 41.29 3.18
3639 3838 0.319900 CGGTGCTACAGTGCTTGTCT 60.320 55.000 0.00 0.00 41.29 3.41
3640 3839 1.067846 CGGTGCTACAGTGCTTGTCTA 60.068 52.381 0.00 0.00 41.29 2.59
3641 3840 2.611518 GGTGCTACAGTGCTTGTCTAG 58.388 52.381 0.00 0.00 41.29 2.43
3642 3841 2.028930 GGTGCTACAGTGCTTGTCTAGT 60.029 50.000 0.00 0.00 41.29 2.57
3643 3842 2.989840 GTGCTACAGTGCTTGTCTAGTG 59.010 50.000 0.00 0.00 41.29 2.74
3644 3843 2.628178 TGCTACAGTGCTTGTCTAGTGT 59.372 45.455 0.00 0.00 41.29 3.55
3645 3844 3.824443 TGCTACAGTGCTTGTCTAGTGTA 59.176 43.478 0.00 0.00 41.29 2.90
3646 3845 4.279922 TGCTACAGTGCTTGTCTAGTGTAA 59.720 41.667 0.00 0.00 41.29 2.41
3647 3846 5.221362 TGCTACAGTGCTTGTCTAGTGTAAA 60.221 40.000 0.00 0.00 41.29 2.01
3648 3847 5.694910 GCTACAGTGCTTGTCTAGTGTAAAA 59.305 40.000 0.00 0.00 41.29 1.52
3649 3848 6.369065 GCTACAGTGCTTGTCTAGTGTAAAAT 59.631 38.462 0.00 0.00 41.29 1.82
3650 3849 6.545504 ACAGTGCTTGTCTAGTGTAAAATG 57.454 37.500 0.00 0.00 33.87 2.32
3651 3850 6.288294 ACAGTGCTTGTCTAGTGTAAAATGA 58.712 36.000 0.00 0.00 33.87 2.57
3652 3851 6.765989 ACAGTGCTTGTCTAGTGTAAAATGAA 59.234 34.615 0.00 0.00 33.87 2.57
3653 3852 7.041780 ACAGTGCTTGTCTAGTGTAAAATGAAG 60.042 37.037 0.00 0.00 33.87 3.02
3654 3853 7.171508 CAGTGCTTGTCTAGTGTAAAATGAAGA 59.828 37.037 0.00 0.00 0.00 2.87
3655 3854 7.715249 AGTGCTTGTCTAGTGTAAAATGAAGAA 59.285 33.333 0.00 0.00 0.00 2.52
3656 3855 8.012241 GTGCTTGTCTAGTGTAAAATGAAGAAG 58.988 37.037 0.00 0.00 0.00 2.85
3657 3856 7.173218 TGCTTGTCTAGTGTAAAATGAAGAAGG 59.827 37.037 0.00 0.00 0.00 3.46
3658 3857 7.387948 GCTTGTCTAGTGTAAAATGAAGAAGGA 59.612 37.037 0.00 0.00 0.00 3.36
3659 3858 9.273016 CTTGTCTAGTGTAAAATGAAGAAGGAA 57.727 33.333 0.00 0.00 0.00 3.36
3660 3859 9.793259 TTGTCTAGTGTAAAATGAAGAAGGAAT 57.207 29.630 0.00 0.00 0.00 3.01
3661 3860 9.219603 TGTCTAGTGTAAAATGAAGAAGGAATG 57.780 33.333 0.00 0.00 0.00 2.67
3662 3861 8.178313 GTCTAGTGTAAAATGAAGAAGGAATGC 58.822 37.037 0.00 0.00 0.00 3.56
3663 3862 8.103305 TCTAGTGTAAAATGAAGAAGGAATGCT 58.897 33.333 0.00 0.00 0.00 3.79
3664 3863 9.383519 CTAGTGTAAAATGAAGAAGGAATGCTA 57.616 33.333 0.00 0.00 0.00 3.49
3665 3864 8.273780 AGTGTAAAATGAAGAAGGAATGCTAG 57.726 34.615 0.00 0.00 0.00 3.42
3666 3865 7.337942 AGTGTAAAATGAAGAAGGAATGCTAGG 59.662 37.037 0.00 0.00 0.00 3.02
3667 3866 6.603201 TGTAAAATGAAGAAGGAATGCTAGGG 59.397 38.462 0.00 0.00 0.00 3.53
3668 3867 5.456921 AAATGAAGAAGGAATGCTAGGGA 57.543 39.130 0.00 0.00 0.00 4.20
3669 3868 3.914426 TGAAGAAGGAATGCTAGGGAC 57.086 47.619 0.00 0.00 0.00 4.46
3670 3869 3.454858 TGAAGAAGGAATGCTAGGGACT 58.545 45.455 0.00 0.00 46.37 3.85
3671 3870 4.620723 TGAAGAAGGAATGCTAGGGACTA 58.379 43.478 0.00 0.00 41.75 2.59
3672 3871 5.219739 TGAAGAAGGAATGCTAGGGACTAT 58.780 41.667 0.00 0.00 41.70 2.12
3673 3872 5.667626 TGAAGAAGGAATGCTAGGGACTATT 59.332 40.000 0.00 0.00 41.70 1.73
3674 3873 6.844388 TGAAGAAGGAATGCTAGGGACTATTA 59.156 38.462 0.00 0.00 41.70 0.98
3675 3874 6.926630 AGAAGGAATGCTAGGGACTATTAG 57.073 41.667 0.00 0.00 41.70 1.73
3676 3875 5.247337 AGAAGGAATGCTAGGGACTATTAGC 59.753 44.000 0.00 0.00 41.70 3.09
3680 3879 3.330126 TGCTAGGGACTATTAGCAGGT 57.670 47.619 2.32 0.00 45.26 4.00
3681 3880 3.654273 TGCTAGGGACTATTAGCAGGTT 58.346 45.455 2.32 0.00 45.26 3.50
3682 3881 4.811498 TGCTAGGGACTATTAGCAGGTTA 58.189 43.478 2.32 0.00 45.26 2.85
3683 3882 5.403512 TGCTAGGGACTATTAGCAGGTTAT 58.596 41.667 2.32 0.00 45.26 1.89
3684 3883 5.844516 TGCTAGGGACTATTAGCAGGTTATT 59.155 40.000 2.32 0.00 45.26 1.40
3685 3884 6.329197 TGCTAGGGACTATTAGCAGGTTATTT 59.671 38.462 2.32 0.00 45.26 1.40
3686 3885 7.511371 TGCTAGGGACTATTAGCAGGTTATTTA 59.489 37.037 2.32 0.00 45.26 1.40
3687 3886 7.818446 GCTAGGGACTATTAGCAGGTTATTTAC 59.182 40.741 0.00 0.00 41.70 2.01
3688 3887 7.932683 AGGGACTATTAGCAGGTTATTTACT 57.067 36.000 0.00 0.00 36.02 2.24
3689 3888 8.333226 AGGGACTATTAGCAGGTTATTTACTT 57.667 34.615 0.00 0.00 36.02 2.24
3690 3889 8.779031 AGGGACTATTAGCAGGTTATTTACTTT 58.221 33.333 0.00 0.00 36.02 2.66
3691 3890 9.404848 GGGACTATTAGCAGGTTATTTACTTTT 57.595 33.333 0.00 0.00 0.00 2.27
3694 3893 9.749340 ACTATTAGCAGGTTATTTACTTTTGGT 57.251 29.630 0.00 0.00 0.00 3.67
3751 3950 9.480053 AATTTTATCTCACCATCAACTTGTTTG 57.520 29.630 0.00 0.00 36.42 2.93
3752 3951 7.581213 TTTATCTCACCATCAACTTGTTTGT 57.419 32.000 0.00 0.00 36.49 2.83
3753 3952 8.684386 TTTATCTCACCATCAACTTGTTTGTA 57.316 30.769 0.00 0.00 36.49 2.41
3754 3953 8.862325 TTATCTCACCATCAACTTGTTTGTAT 57.138 30.769 0.00 0.00 36.49 2.29
3755 3954 6.558771 TCTCACCATCAACTTGTTTGTATG 57.441 37.500 0.00 0.00 36.49 2.39
3756 3955 6.061441 TCTCACCATCAACTTGTTTGTATGT 58.939 36.000 0.00 0.00 36.49 2.29
3757 3956 6.017192 TCTCACCATCAACTTGTTTGTATGTG 60.017 38.462 0.00 0.00 36.49 3.21
3758 3957 5.825151 TCACCATCAACTTGTTTGTATGTGA 59.175 36.000 0.00 0.00 36.49 3.58
3759 3958 6.489700 TCACCATCAACTTGTTTGTATGTGAT 59.510 34.615 0.00 0.00 36.49 3.06
3760 3959 6.803320 CACCATCAACTTGTTTGTATGTGATC 59.197 38.462 0.00 0.00 36.49 2.92
3761 3960 6.489700 ACCATCAACTTGTTTGTATGTGATCA 59.510 34.615 0.00 0.00 36.49 2.92
3762 3961 7.025365 CCATCAACTTGTTTGTATGTGATCAG 58.975 38.462 0.00 0.00 36.49 2.90
3763 3962 7.308770 CCATCAACTTGTTTGTATGTGATCAGT 60.309 37.037 0.00 0.00 36.49 3.41
3764 3963 8.720562 CATCAACTTGTTTGTATGTGATCAGTA 58.279 33.333 0.00 0.00 36.49 2.74
3765 3964 8.669946 TCAACTTGTTTGTATGTGATCAGTAA 57.330 30.769 0.00 0.00 36.49 2.24
3766 3965 9.283768 TCAACTTGTTTGTATGTGATCAGTAAT 57.716 29.630 0.00 0.00 36.49 1.89
3767 3966 9.897744 CAACTTGTTTGTATGTGATCAGTAATT 57.102 29.630 0.00 0.00 0.00 1.40
3851 4050 6.683715 GGATACTGTAGCTTCTCTAACATCC 58.316 44.000 2.84 0.00 0.00 3.51
3852 4051 6.294843 GGATACTGTAGCTTCTCTAACATCCC 60.295 46.154 2.84 0.00 0.00 3.85
3853 4052 4.615513 ACTGTAGCTTCTCTAACATCCCT 58.384 43.478 0.00 0.00 0.00 4.20
3854 4053 5.026790 ACTGTAGCTTCTCTAACATCCCTT 58.973 41.667 0.00 0.00 0.00 3.95
3855 4054 5.105146 ACTGTAGCTTCTCTAACATCCCTTG 60.105 44.000 0.00 0.00 0.00 3.61
3856 4055 4.777896 TGTAGCTTCTCTAACATCCCTTGT 59.222 41.667 0.00 0.00 41.53 3.16
3857 4056 4.213564 AGCTTCTCTAACATCCCTTGTG 57.786 45.455 0.00 0.00 38.99 3.33
3858 4057 3.584848 AGCTTCTCTAACATCCCTTGTGT 59.415 43.478 0.00 0.00 38.99 3.72
3859 4058 4.777896 AGCTTCTCTAACATCCCTTGTGTA 59.222 41.667 0.00 0.00 38.99 2.90
3860 4059 5.426833 AGCTTCTCTAACATCCCTTGTGTAT 59.573 40.000 0.00 0.00 38.99 2.29
3861 4060 5.525378 GCTTCTCTAACATCCCTTGTGTATG 59.475 44.000 0.00 0.00 38.99 2.39
3862 4061 6.620877 TTCTCTAACATCCCTTGTGTATGT 57.379 37.500 0.00 0.00 38.99 2.29
3863 4062 6.620877 TCTCTAACATCCCTTGTGTATGTT 57.379 37.500 0.00 0.00 44.01 2.71
3864 4063 7.727578 TCTCTAACATCCCTTGTGTATGTTA 57.272 36.000 0.00 0.00 42.31 2.41
3868 4067 5.359194 ACATCCCTTGTGTATGTTAGAGG 57.641 43.478 0.00 0.00 37.11 3.69
3869 4068 5.030147 ACATCCCTTGTGTATGTTAGAGGA 58.970 41.667 0.00 0.00 37.11 3.71
3870 4069 5.667626 ACATCCCTTGTGTATGTTAGAGGAT 59.332 40.000 0.00 0.00 37.11 3.24
3871 4070 5.871396 TCCCTTGTGTATGTTAGAGGATC 57.129 43.478 0.00 0.00 0.00 3.36
3872 4071 8.301685 ACATCCCTTGTGTATGTTAGAGGATCT 61.302 40.741 0.00 0.00 43.33 2.75
3883 4082 2.249692 GAGGATCTAGCTCCGTCGG 58.750 63.158 4.39 4.39 40.46 4.79
3884 4083 0.535553 GAGGATCTAGCTCCGTCGGT 60.536 60.000 11.88 0.00 40.46 4.69
3885 4084 0.820074 AGGATCTAGCTCCGTCGGTG 60.820 60.000 11.88 10.34 40.46 4.94
3886 4085 1.008309 GATCTAGCTCCGTCGGTGC 60.008 63.158 26.79 26.79 41.85 5.01
3887 4086 1.725557 GATCTAGCTCCGTCGGTGCA 61.726 60.000 32.95 20.47 43.69 4.57
3888 4087 1.109920 ATCTAGCTCCGTCGGTGCAT 61.110 55.000 32.95 22.12 43.69 3.96
3889 4088 0.464916 TCTAGCTCCGTCGGTGCATA 60.465 55.000 32.95 22.06 43.69 3.14
3890 4089 0.039978 CTAGCTCCGTCGGTGCATAG 60.040 60.000 32.95 25.68 43.69 2.23
3891 4090 1.452953 TAGCTCCGTCGGTGCATAGG 61.453 60.000 32.95 9.22 43.69 2.57
3892 4091 3.077519 GCTCCGTCGGTGCATAGGT 62.078 63.158 28.52 0.00 41.27 3.08
3893 4092 1.515954 CTCCGTCGGTGCATAGGTT 59.484 57.895 11.88 0.00 0.00 3.50
3894 4093 0.742505 CTCCGTCGGTGCATAGGTTA 59.257 55.000 11.88 0.00 0.00 2.85
3895 4094 0.457035 TCCGTCGGTGCATAGGTTAC 59.543 55.000 11.88 0.00 0.00 2.50
3896 4095 0.173935 CCGTCGGTGCATAGGTTACA 59.826 55.000 2.08 0.00 0.00 2.41
3897 4096 1.202486 CCGTCGGTGCATAGGTTACAT 60.202 52.381 2.08 0.00 0.00 2.29
3898 4097 2.034939 CCGTCGGTGCATAGGTTACATA 59.965 50.000 2.08 0.00 0.00 2.29
3899 4098 3.305813 CCGTCGGTGCATAGGTTACATAT 60.306 47.826 2.08 0.00 0.00 1.78
3900 4099 4.082625 CCGTCGGTGCATAGGTTACATATA 60.083 45.833 2.08 0.00 0.00 0.86
3901 4100 5.393787 CCGTCGGTGCATAGGTTACATATAT 60.394 44.000 2.08 0.00 0.00 0.86
3902 4101 6.183360 CCGTCGGTGCATAGGTTACATATATA 60.183 42.308 2.08 0.00 0.00 0.86
3903 4102 7.423199 CGTCGGTGCATAGGTTACATATATAT 58.577 38.462 0.00 0.00 0.00 0.86
3904 4103 8.562052 CGTCGGTGCATAGGTTACATATATATA 58.438 37.037 0.00 0.00 0.00 0.86
3905 4104 9.674824 GTCGGTGCATAGGTTACATATATATAC 57.325 37.037 0.00 0.00 0.00 1.47
3906 4105 9.636789 TCGGTGCATAGGTTACATATATATACT 57.363 33.333 0.00 0.00 0.00 2.12
3907 4106 9.678941 CGGTGCATAGGTTACATATATATACTG 57.321 37.037 0.00 0.00 0.00 2.74
3925 4124 4.559862 ACTGATCTGGTTTACTTGAGGG 57.440 45.455 4.49 0.00 0.00 4.30
3926 4125 3.910627 ACTGATCTGGTTTACTTGAGGGT 59.089 43.478 4.49 0.00 0.00 4.34
3927 4126 4.256920 CTGATCTGGTTTACTTGAGGGTG 58.743 47.826 0.00 0.00 0.00 4.61
3928 4127 3.650942 TGATCTGGTTTACTTGAGGGTGT 59.349 43.478 0.00 0.00 0.00 4.16
3929 4128 4.104102 TGATCTGGTTTACTTGAGGGTGTT 59.896 41.667 0.00 0.00 0.00 3.32
3930 4129 4.081322 TCTGGTTTACTTGAGGGTGTTC 57.919 45.455 0.00 0.00 0.00 3.18
3931 4130 3.714798 TCTGGTTTACTTGAGGGTGTTCT 59.285 43.478 0.00 0.00 0.00 3.01
3932 4131 4.065789 CTGGTTTACTTGAGGGTGTTCTC 58.934 47.826 0.00 0.00 0.00 2.87
3933 4132 3.181448 TGGTTTACTTGAGGGTGTTCTCC 60.181 47.826 0.00 0.00 33.04 3.71
3934 4133 3.181448 GGTTTACTTGAGGGTGTTCTCCA 60.181 47.826 0.00 0.00 33.04 3.86
3935 4134 4.506802 GGTTTACTTGAGGGTGTTCTCCAT 60.507 45.833 0.00 0.00 33.04 3.41
3936 4135 4.553330 TTACTTGAGGGTGTTCTCCATC 57.447 45.455 0.00 0.00 38.56 3.51
3937 4136 1.276421 ACTTGAGGGTGTTCTCCATCG 59.724 52.381 2.14 0.00 40.62 3.84
3938 4137 1.276421 CTTGAGGGTGTTCTCCATCGT 59.724 52.381 2.14 0.00 40.62 3.73
3939 4138 0.608130 TGAGGGTGTTCTCCATCGTG 59.392 55.000 2.14 0.00 40.62 4.35
3940 4139 0.608640 GAGGGTGTTCTCCATCGTGT 59.391 55.000 0.00 0.00 0.00 4.49
3941 4140 1.002087 GAGGGTGTTCTCCATCGTGTT 59.998 52.381 0.00 0.00 0.00 3.32
3942 4141 1.156736 GGGTGTTCTCCATCGTGTTG 58.843 55.000 0.00 0.00 0.00 3.33
3943 4142 0.517316 GGTGTTCTCCATCGTGTTGC 59.483 55.000 0.00 0.00 0.00 4.17
3944 4143 1.512926 GTGTTCTCCATCGTGTTGCT 58.487 50.000 0.00 0.00 0.00 3.91
3945 4144 1.873591 GTGTTCTCCATCGTGTTGCTT 59.126 47.619 0.00 0.00 0.00 3.91
3946 4145 1.872952 TGTTCTCCATCGTGTTGCTTG 59.127 47.619 0.00 0.00 0.00 4.01
3947 4146 1.197721 GTTCTCCATCGTGTTGCTTGG 59.802 52.381 0.00 0.00 0.00 3.61
3948 4147 0.396435 TCTCCATCGTGTTGCTTGGT 59.604 50.000 0.00 0.00 0.00 3.67
3949 4148 0.518636 CTCCATCGTGTTGCTTGGTG 59.481 55.000 0.00 0.00 0.00 4.17
3950 4149 0.888736 TCCATCGTGTTGCTTGGTGG 60.889 55.000 0.00 0.00 0.00 4.61
3951 4150 1.172180 CCATCGTGTTGCTTGGTGGT 61.172 55.000 0.00 0.00 0.00 4.16
3952 4151 0.040157 CATCGTGTTGCTTGGTGGTG 60.040 55.000 0.00 0.00 0.00 4.17
3953 4152 0.465460 ATCGTGTTGCTTGGTGGTGT 60.465 50.000 0.00 0.00 0.00 4.16
3954 4153 1.092921 TCGTGTTGCTTGGTGGTGTC 61.093 55.000 0.00 0.00 0.00 3.67
3955 4154 1.733526 GTGTTGCTTGGTGGTGTCC 59.266 57.895 0.00 0.00 0.00 4.02
3956 4155 1.454847 TGTTGCTTGGTGGTGTCCC 60.455 57.895 0.00 0.00 0.00 4.46
3957 4156 1.454847 GTTGCTTGGTGGTGTCCCA 60.455 57.895 0.00 0.00 38.87 4.37
3958 4157 0.827507 GTTGCTTGGTGGTGTCCCAT 60.828 55.000 0.00 0.00 44.35 4.00
3959 4158 0.827089 TTGCTTGGTGGTGTCCCATG 60.827 55.000 0.00 0.00 44.35 3.66
3960 4159 1.978617 GCTTGGTGGTGTCCCATGG 60.979 63.158 4.14 4.14 44.35 3.66
3961 4160 1.460255 CTTGGTGGTGTCCCATGGT 59.540 57.895 11.73 0.00 44.35 3.55
3962 4161 0.609131 CTTGGTGGTGTCCCATGGTC 60.609 60.000 11.73 4.06 44.35 4.02
3963 4162 1.065410 TTGGTGGTGTCCCATGGTCT 61.065 55.000 11.73 0.00 44.35 3.85
3964 4163 1.065410 TGGTGGTGTCCCATGGTCTT 61.065 55.000 11.73 0.00 44.35 3.01
3965 4164 0.322546 GGTGGTGTCCCATGGTCTTC 60.323 60.000 11.73 0.00 44.35 2.87
3966 4165 0.693049 GTGGTGTCCCATGGTCTTCT 59.307 55.000 11.73 0.00 44.35 2.85
3967 4166 1.073923 GTGGTGTCCCATGGTCTTCTT 59.926 52.381 11.73 0.00 44.35 2.52
3968 4167 1.351017 TGGTGTCCCATGGTCTTCTTC 59.649 52.381 11.73 0.00 35.17 2.87
3969 4168 1.630878 GGTGTCCCATGGTCTTCTTCT 59.369 52.381 11.73 0.00 0.00 2.85
3970 4169 2.616510 GGTGTCCCATGGTCTTCTTCTG 60.617 54.545 11.73 0.00 0.00 3.02
3971 4170 1.003580 TGTCCCATGGTCTTCTTCTGC 59.996 52.381 11.73 0.00 0.00 4.26
3972 4171 1.280421 GTCCCATGGTCTTCTTCTGCT 59.720 52.381 11.73 0.00 0.00 4.24
3973 4172 1.280133 TCCCATGGTCTTCTTCTGCTG 59.720 52.381 11.73 0.00 0.00 4.41
3974 4173 1.093159 CCATGGTCTTCTTCTGCTGC 58.907 55.000 2.57 0.00 0.00 5.25
3975 4174 1.339824 CCATGGTCTTCTTCTGCTGCT 60.340 52.381 2.57 0.00 0.00 4.24
3976 4175 2.434428 CATGGTCTTCTTCTGCTGCTT 58.566 47.619 0.00 0.00 0.00 3.91
3977 4176 2.645838 TGGTCTTCTTCTGCTGCTTT 57.354 45.000 0.00 0.00 0.00 3.51
3978 4177 2.224606 TGGTCTTCTTCTGCTGCTTTG 58.775 47.619 0.00 0.00 0.00 2.77
3979 4178 1.068679 GGTCTTCTTCTGCTGCTTTGC 60.069 52.381 0.00 0.00 0.00 3.68
3980 4179 1.878734 GTCTTCTTCTGCTGCTTTGCT 59.121 47.619 0.00 0.00 0.00 3.91
3981 4180 3.070018 GTCTTCTTCTGCTGCTTTGCTA 58.930 45.455 0.00 0.00 0.00 3.49
3982 4181 3.499918 GTCTTCTTCTGCTGCTTTGCTAA 59.500 43.478 0.00 0.00 0.00 3.09
3983 4182 4.155644 GTCTTCTTCTGCTGCTTTGCTAAT 59.844 41.667 0.00 0.00 0.00 1.73
3984 4183 4.394300 TCTTCTTCTGCTGCTTTGCTAATC 59.606 41.667 0.00 0.00 0.00 1.75
3985 4184 3.678289 TCTTCTGCTGCTTTGCTAATCA 58.322 40.909 0.00 0.00 0.00 2.57
3986 4185 3.438087 TCTTCTGCTGCTTTGCTAATCAC 59.562 43.478 0.00 0.00 0.00 3.06
3987 4186 1.733912 TCTGCTGCTTTGCTAATCACG 59.266 47.619 0.00 0.00 0.00 4.35
3988 4187 0.804364 TGCTGCTTTGCTAATCACGG 59.196 50.000 0.00 0.00 0.00 4.94
3989 4188 0.099436 GCTGCTTTGCTAATCACGGG 59.901 55.000 0.00 0.00 0.00 5.28
3990 4189 1.737838 CTGCTTTGCTAATCACGGGA 58.262 50.000 0.00 0.00 0.00 5.14
3991 4190 2.292267 CTGCTTTGCTAATCACGGGAT 58.708 47.619 0.00 0.00 34.43 3.85
3992 4191 2.288666 TGCTTTGCTAATCACGGGATC 58.711 47.619 0.00 0.00 31.88 3.36
3993 4192 2.092968 TGCTTTGCTAATCACGGGATCT 60.093 45.455 0.00 0.00 31.88 2.75
3994 4193 2.545946 GCTTTGCTAATCACGGGATCTC 59.454 50.000 0.00 0.00 31.88 2.75
3995 4194 3.797039 CTTTGCTAATCACGGGATCTCA 58.203 45.455 0.00 0.00 31.88 3.27
3996 4195 3.459232 TTGCTAATCACGGGATCTCAG 57.541 47.619 0.00 0.00 31.88 3.35
3997 4196 1.069204 TGCTAATCACGGGATCTCAGC 59.931 52.381 17.48 17.48 31.88 4.26
3998 4197 1.932604 GCTAATCACGGGATCTCAGCG 60.933 57.143 0.00 0.00 31.88 5.18
3999 4198 1.338337 CTAATCACGGGATCTCAGCGT 59.662 52.381 0.00 0.00 31.88 5.07
4000 4199 0.103208 AATCACGGGATCTCAGCGTC 59.897 55.000 0.00 0.00 31.88 5.19
4001 4200 1.739338 ATCACGGGATCTCAGCGTCC 61.739 60.000 0.00 0.00 0.00 4.79
4002 4201 2.362503 ACGGGATCTCAGCGTCCA 60.363 61.111 0.00 0.00 36.19 4.02
4003 4202 1.758514 ACGGGATCTCAGCGTCCAT 60.759 57.895 0.00 0.00 36.19 3.41
4004 4203 1.300465 CGGGATCTCAGCGTCCATG 60.300 63.158 0.00 0.00 36.19 3.66
4005 4204 1.826024 GGGATCTCAGCGTCCATGT 59.174 57.895 0.00 0.00 36.19 3.21
4006 4205 0.531532 GGGATCTCAGCGTCCATGTG 60.532 60.000 0.00 0.00 36.19 3.21
4007 4206 0.176680 GGATCTCAGCGTCCATGTGT 59.823 55.000 0.00 0.00 34.57 3.72
4008 4207 1.406069 GGATCTCAGCGTCCATGTGTT 60.406 52.381 0.00 0.00 34.57 3.32
4009 4208 1.929836 GATCTCAGCGTCCATGTGTTC 59.070 52.381 0.00 0.00 0.00 3.18
4010 4209 0.969149 TCTCAGCGTCCATGTGTTCT 59.031 50.000 0.00 0.00 0.00 3.01
4011 4210 2.167662 TCTCAGCGTCCATGTGTTCTA 58.832 47.619 0.00 0.00 0.00 2.10
4012 4211 2.094700 TCTCAGCGTCCATGTGTTCTAC 60.095 50.000 0.00 0.00 0.00 2.59
4013 4212 1.616374 TCAGCGTCCATGTGTTCTACA 59.384 47.619 0.00 0.00 44.87 2.74
4014 4213 2.036604 TCAGCGTCCATGTGTTCTACAA 59.963 45.455 0.00 0.00 43.77 2.41
4015 4214 2.805671 CAGCGTCCATGTGTTCTACAAA 59.194 45.455 0.00 0.00 43.77 2.83
4016 4215 3.436704 CAGCGTCCATGTGTTCTACAAAT 59.563 43.478 0.00 0.00 43.77 2.32
4017 4216 3.436704 AGCGTCCATGTGTTCTACAAATG 59.563 43.478 3.48 3.48 42.20 2.32
4018 4217 3.188460 GCGTCCATGTGTTCTACAAATGT 59.812 43.478 8.68 0.00 41.23 2.71
4019 4218 4.320202 GCGTCCATGTGTTCTACAAATGTT 60.320 41.667 8.68 0.00 41.23 2.71
4020 4219 5.757886 CGTCCATGTGTTCTACAAATGTTT 58.242 37.500 8.68 0.00 41.23 2.83
4021 4220 5.624900 CGTCCATGTGTTCTACAAATGTTTG 59.375 40.000 8.68 4.04 41.23 2.93
4034 4233 5.462034 CAAATGTTTGTTTCTTGGCGAAA 57.538 34.783 0.00 0.00 39.23 3.46
4035 4234 5.862811 CAAATGTTTGTTTCTTGGCGAAAA 58.137 33.333 0.00 0.00 42.87 2.29
4036 4235 5.717038 AATGTTTGTTTCTTGGCGAAAAG 57.283 34.783 0.00 0.00 42.87 2.27
4037 4236 4.181309 TGTTTGTTTCTTGGCGAAAAGT 57.819 36.364 0.00 0.00 42.87 2.66
4038 4237 4.170256 TGTTTGTTTCTTGGCGAAAAGTC 58.830 39.130 0.00 0.00 42.87 3.01
4039 4238 3.430333 TTGTTTCTTGGCGAAAAGTCC 57.570 42.857 0.00 0.00 42.87 3.85
4040 4239 2.370349 TGTTTCTTGGCGAAAAGTCCA 58.630 42.857 0.00 0.00 42.87 4.02
4041 4240 2.955660 TGTTTCTTGGCGAAAAGTCCAT 59.044 40.909 0.00 0.00 42.87 3.41
4042 4241 3.383185 TGTTTCTTGGCGAAAAGTCCATT 59.617 39.130 0.00 0.00 42.87 3.16
4043 4242 3.915437 TTCTTGGCGAAAAGTCCATTC 57.085 42.857 0.00 0.00 31.54 2.67
4044 4243 3.140325 TCTTGGCGAAAAGTCCATTCT 57.860 42.857 0.00 0.00 31.54 2.40
4045 4244 2.813754 TCTTGGCGAAAAGTCCATTCTG 59.186 45.455 0.00 0.00 31.54 3.02
4046 4245 0.881118 TGGCGAAAAGTCCATTCTGC 59.119 50.000 0.00 0.00 0.00 4.26
4047 4246 0.881118 GGCGAAAAGTCCATTCTGCA 59.119 50.000 0.00 0.00 32.13 4.41
4048 4247 1.401539 GGCGAAAAGTCCATTCTGCAC 60.402 52.381 0.00 0.00 32.13 4.57
4049 4248 1.401539 GCGAAAAGTCCATTCTGCACC 60.402 52.381 0.00 0.00 0.00 5.01
4050 4249 1.200020 CGAAAAGTCCATTCTGCACCC 59.800 52.381 0.00 0.00 0.00 4.61
4051 4250 1.200020 GAAAAGTCCATTCTGCACCCG 59.800 52.381 0.00 0.00 0.00 5.28
4052 4251 0.400213 AAAGTCCATTCTGCACCCGA 59.600 50.000 0.00 0.00 0.00 5.14
4053 4252 0.036010 AAGTCCATTCTGCACCCGAG 60.036 55.000 0.00 0.00 0.00 4.63
4054 4253 2.109126 GTCCATTCTGCACCCGAGC 61.109 63.158 0.00 0.00 0.00 5.03
4055 4254 2.270205 CCATTCTGCACCCGAGCT 59.730 61.111 0.00 0.00 34.99 4.09
4056 4255 1.817099 CCATTCTGCACCCGAGCTC 60.817 63.158 2.73 2.73 34.99 4.09
4057 4256 1.078918 CATTCTGCACCCGAGCTCA 60.079 57.895 15.40 0.00 34.99 4.26
4058 4257 0.463295 CATTCTGCACCCGAGCTCAT 60.463 55.000 15.40 0.00 34.99 2.90
4059 4258 1.123077 ATTCTGCACCCGAGCTCATA 58.877 50.000 15.40 0.00 34.99 2.15
4060 4259 1.123077 TTCTGCACCCGAGCTCATAT 58.877 50.000 15.40 0.00 34.99 1.78
4061 4260 0.390492 TCTGCACCCGAGCTCATATG 59.610 55.000 15.40 9.02 34.99 1.78
4062 4261 1.226686 CTGCACCCGAGCTCATATGC 61.227 60.000 20.59 20.59 34.99 3.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
70 71 4.702081 AGACGTCGTCGGTGCTGC 62.702 66.667 19.11 0.00 41.85 5.25
71 72 2.502080 GAGACGTCGTCGGTGCTG 60.502 66.667 19.11 0.00 41.85 4.41
72 73 3.735029 GGAGACGTCGTCGGTGCT 61.735 66.667 19.11 1.55 41.85 4.40
112 113 2.178890 GCTGCAATAGAGCGCTGCT 61.179 57.895 18.48 14.77 46.08 4.24
118 119 1.028330 TGCTGTGGCTGCAATAGAGC 61.028 55.000 4.82 8.67 35.52 4.09
132 133 3.437795 GCAATGGAGCGCTGCTGT 61.438 61.111 29.46 15.53 39.88 4.40
134 135 2.674033 TTGCAATGGAGCGCTGCT 60.674 55.556 29.46 12.53 43.88 4.24
136 137 1.136147 GAGTTGCAATGGAGCGCTG 59.864 57.895 18.48 0.53 37.31 5.18
137 138 0.250234 TAGAGTTGCAATGGAGCGCT 59.750 50.000 11.27 11.27 37.31 5.92
139 140 0.654683 GCTAGAGTTGCAATGGAGCG 59.345 55.000 0.59 0.00 37.31 5.03
165 167 1.230635 TGCTGCGTTGGAGCTTCTTC 61.231 55.000 11.54 0.00 37.35 2.87
168 170 2.558313 GTGCTGCGTTGGAGCTTC 59.442 61.111 11.54 0.00 37.35 3.86
200 202 4.463879 CACGCAGGAGGAGGCTGG 62.464 72.222 0.00 0.00 0.00 4.85
305 307 3.364441 GCCGCCAGTGATGCAACA 61.364 61.111 0.00 0.00 0.00 3.33
307 309 4.695993 TCGCCGCCAGTGATGCAA 62.696 61.111 0.00 0.00 0.00 4.08
397 399 4.794648 TTGCCGCGAATGAGGGGG 62.795 66.667 8.23 0.00 43.57 5.40
454 459 2.044650 AATCGGGAGGGACGACGA 60.045 61.111 0.00 0.00 43.78 4.20
459 464 2.107141 CTGCGAATCGGGAGGGAC 59.893 66.667 4.35 0.00 0.00 4.46
478 483 4.248842 CGACCACCAGCCACCACA 62.249 66.667 0.00 0.00 0.00 4.17
532 537 3.721087 TCCTTTCCCCATCTCTTGTTC 57.279 47.619 0.00 0.00 0.00 3.18
536 541 4.018870 GTCTCTTTCCTTTCCCCATCTCTT 60.019 45.833 0.00 0.00 0.00 2.85
564 569 2.473664 CTTCTCCACGCGTTCTCCGT 62.474 60.000 10.22 0.00 39.91 4.69
565 570 1.801913 CTTCTCCACGCGTTCTCCG 60.802 63.158 10.22 0.00 40.40 4.63
581 586 3.454082 CTCAGCCTTATCCCTTCACTCTT 59.546 47.826 0.00 0.00 0.00 2.85
645 650 0.108329 CATGTCGTAAACCTCGCCCT 60.108 55.000 0.00 0.00 0.00 5.19
648 653 2.159421 TCTCTCATGTCGTAAACCTCGC 60.159 50.000 0.00 0.00 0.00 5.03
650 655 5.163602 ACTGATCTCTCATGTCGTAAACCTC 60.164 44.000 0.00 0.00 0.00 3.85
659 664 3.937706 CCAACCAACTGATCTCTCATGTC 59.062 47.826 0.00 0.00 0.00 3.06
661 666 4.212143 TCCAACCAACTGATCTCTCATG 57.788 45.455 0.00 0.00 0.00 3.07
695 700 8.461222 TGAACAGAGCAAGTGATAAAAATATGG 58.539 33.333 0.00 0.00 0.00 2.74
813 818 1.924524 CAGACGGTATTACTTGGCACG 59.075 52.381 0.00 0.00 0.00 5.34
821 826 6.704493 TCCATATTTTCAGCAGACGGTATTAC 59.296 38.462 0.00 0.00 0.00 1.89
831 836 4.818546 CACTACCCTCCATATTTTCAGCAG 59.181 45.833 0.00 0.00 0.00 4.24
870 875 6.139679 TCTTCCCTATTTGACATTGGTTCT 57.860 37.500 0.00 0.00 0.00 3.01
1230 1236 4.954202 AGTGAGAAGGACGATATTGTGGTA 59.046 41.667 0.00 0.00 0.00 3.25
1407 1413 4.061596 TCATGTTCGCACTTATGTTGTCA 58.938 39.130 0.00 0.00 0.00 3.58
1497 1503 0.380378 TGAACAACACGCAGAAAGGC 59.620 50.000 0.00 0.00 0.00 4.35
1560 1566 4.595538 GCCCACGTGACACCGTCA 62.596 66.667 19.30 0.00 39.45 4.35
1629 1638 2.765969 CACATGGGCCAGAAGGGT 59.234 61.111 13.78 1.86 39.65 4.34
1662 1677 1.071699 GACCTCCCAACAAGCACACTA 59.928 52.381 0.00 0.00 0.00 2.74
1802 1826 1.000019 CCTAGTCCACCGTCCTCCA 60.000 63.158 0.00 0.00 0.00 3.86
2050 2077 1.071471 CGCACACCTTTCTCACCCT 59.929 57.895 0.00 0.00 0.00 4.34
2098 2134 3.951775 AGGAGTGTAGAAGCTGACAAG 57.048 47.619 0.00 0.00 0.00 3.16
2268 2306 4.065088 GGATAGCGCATTCAAGGATGTTA 58.935 43.478 11.47 0.00 0.00 2.41
2277 2315 0.179023 TGGCATGGATAGCGCATTCA 60.179 50.000 11.47 6.73 0.00 2.57
2366 2426 2.951642 CAGACCCAAAAGAGCACTGAAA 59.048 45.455 0.00 0.00 0.00 2.69
2411 2474 4.232310 GCCAAAGGCCTAGAGCAG 57.768 61.111 5.16 0.00 44.06 4.24
2590 2680 9.561069 GACACATATAACATTTCCCAAGTAGAT 57.439 33.333 0.00 0.00 0.00 1.98
2599 2689 8.142994 CAGTACTGGACACATATAACATTTCC 57.857 38.462 15.49 0.00 0.00 3.13
2644 2734 0.108329 ACGGATAAACTGCGGAGTGG 60.108 55.000 11.44 0.00 43.91 4.00
2650 2740 8.072567 AGTAAAGTACTATACGGATAAACTGCG 58.927 37.037 0.00 0.00 40.07 5.18
2736 2826 3.138304 CCAATTTGACGACACAAGGAGA 58.862 45.455 0.00 0.00 0.00 3.71
2738 2828 3.201353 TCCAATTTGACGACACAAGGA 57.799 42.857 0.00 0.00 0.00 3.36
2796 2886 3.003689 CACAAGGCAGAAAGTTACTGTGG 59.996 47.826 0.00 0.00 37.64 4.17
2824 2914 7.548097 TCAGTTTCTGTCTATATGTCAAGGAC 58.452 38.462 0.00 0.00 32.61 3.85
2873 2965 0.467290 GCAACTTCCCCACAAGGTGA 60.467 55.000 2.37 0.00 42.88 4.02
2874 2966 0.468029 AGCAACTTCCCCACAAGGTG 60.468 55.000 0.00 0.00 43.07 4.00
2875 2967 0.178990 GAGCAACTTCCCCACAAGGT 60.179 55.000 0.00 0.00 0.00 3.50
2971 3063 1.021390 GTGCACTCTTGGGGACATCG 61.021 60.000 10.32 0.00 42.32 3.84
3022 3114 2.016318 CCAGCGCCATCTTTGTTGATA 58.984 47.619 2.29 0.00 0.00 2.15
3067 3159 3.425359 CGAAACTGGAGCATCATCAACAC 60.425 47.826 0.00 0.00 36.25 3.32
3084 3176 4.315803 TCAGAATCACCTTTCTCCGAAAC 58.684 43.478 0.00 0.00 33.69 2.78
3089 3181 7.337942 ACACATTATTCAGAATCACCTTTCTCC 59.662 37.037 0.00 0.00 33.69 3.71
3129 3222 0.322975 CAGTAGTGCAGCCCTGAGTT 59.677 55.000 0.00 0.00 0.00 3.01
3132 3245 1.673477 CACAGTAGTGCAGCCCTGA 59.327 57.895 12.07 0.00 39.21 3.86
3214 3356 0.466922 GATGGCAGAGGGTTCCATGG 60.467 60.000 4.97 4.97 40.43 3.66
3216 3358 1.002069 TTGATGGCAGAGGGTTCCAT 58.998 50.000 0.00 0.00 42.83 3.41
3281 3475 9.197694 GTGATAGTTCAAGATATATGTCCACAC 57.802 37.037 0.00 0.00 32.48 3.82
3298 3492 8.246871 TCTCATATCGAATGATGGTGATAGTTC 58.753 37.037 9.65 0.00 35.99 3.01
3322 3520 7.230712 AGGAAAACAACTCGAATTAAATGGTCT 59.769 33.333 0.00 0.00 0.00 3.85
3352 3550 3.424433 GGACAATGCGCACTACTGTAAAC 60.424 47.826 14.90 4.75 0.00 2.01
3362 3561 0.521291 TAAAGCTGGACAATGCGCAC 59.479 50.000 14.90 0.00 0.00 5.34
3365 3564 2.483877 TGTCTTAAAGCTGGACAATGCG 59.516 45.455 8.83 0.00 37.10 4.73
3373 3572 3.369147 CACGATCTGTGTCTTAAAGCTGG 59.631 47.826 8.84 0.00 43.88 4.85
3410 3609 3.674410 GCAAGCAAAAGTTCCCTATGCTC 60.674 47.826 0.00 0.00 40.90 4.26
3438 3637 2.227865 ACACGTTCACAAACAAGCTTGT 59.772 40.909 26.36 26.36 44.72 3.16
3465 3664 0.240945 GTGTAACTGGCACATGGCAC 59.759 55.000 3.65 0.00 46.12 5.01
3475 3674 4.906618 AGAAATAGGTGTGGTGTAACTGG 58.093 43.478 0.00 0.00 36.74 4.00
3489 3688 8.937634 ACCGTTACTGTAATTGTAGAAATAGG 57.062 34.615 3.23 0.00 0.00 2.57
3496 3695 8.325997 GCTGAATAACCGTTACTGTAATTGTAG 58.674 37.037 3.23 0.71 0.00 2.74
3497 3696 7.818446 TGCTGAATAACCGTTACTGTAATTGTA 59.182 33.333 3.23 0.00 0.00 2.41
3498 3697 6.651643 TGCTGAATAACCGTTACTGTAATTGT 59.348 34.615 3.23 1.77 0.00 2.71
3499 3698 6.959311 GTGCTGAATAACCGTTACTGTAATTG 59.041 38.462 3.23 1.17 0.00 2.32
3500 3699 6.877322 AGTGCTGAATAACCGTTACTGTAATT 59.123 34.615 3.23 0.00 0.00 1.40
3501 3700 6.403878 AGTGCTGAATAACCGTTACTGTAAT 58.596 36.000 3.23 0.00 0.00 1.89
3502 3701 5.786311 AGTGCTGAATAACCGTTACTGTAA 58.214 37.500 0.00 0.00 0.00 2.41
3503 3702 5.395682 AGTGCTGAATAACCGTTACTGTA 57.604 39.130 0.00 0.00 0.00 2.74
3504 3703 4.267349 AGTGCTGAATAACCGTTACTGT 57.733 40.909 0.00 0.00 0.00 3.55
3505 3704 4.929808 AGAAGTGCTGAATAACCGTTACTG 59.070 41.667 0.00 0.00 0.00 2.74
3506 3705 5.148651 AGAAGTGCTGAATAACCGTTACT 57.851 39.130 0.00 0.00 0.00 2.24
3527 3726 9.935682 ACGCAAACAATGAGAAAATATATACAG 57.064 29.630 0.00 0.00 32.52 2.74
3528 3727 9.929722 GACGCAAACAATGAGAAAATATATACA 57.070 29.630 0.00 0.00 32.52 2.29
3531 3730 8.677300 ACAGACGCAAACAATGAGAAAATATAT 58.323 29.630 0.00 0.00 32.52 0.86
3532 3731 8.039603 ACAGACGCAAACAATGAGAAAATATA 57.960 30.769 0.00 0.00 32.52 0.86
3533 3732 6.913170 ACAGACGCAAACAATGAGAAAATAT 58.087 32.000 0.00 0.00 32.52 1.28
3534 3733 6.017523 TGACAGACGCAAACAATGAGAAAATA 60.018 34.615 0.00 0.00 32.52 1.40
3535 3734 5.186996 ACAGACGCAAACAATGAGAAAAT 57.813 34.783 0.00 0.00 32.52 1.82
3536 3735 4.095632 TGACAGACGCAAACAATGAGAAAA 59.904 37.500 0.00 0.00 32.52 2.29
3537 3736 3.625313 TGACAGACGCAAACAATGAGAAA 59.375 39.130 0.00 0.00 32.52 2.52
3538 3737 3.002246 GTGACAGACGCAAACAATGAGAA 59.998 43.478 0.00 0.00 32.52 2.87
3539 3738 2.543848 GTGACAGACGCAAACAATGAGA 59.456 45.455 0.00 0.00 32.52 3.27
3540 3739 2.660094 CGTGACAGACGCAAACAATGAG 60.660 50.000 0.00 0.00 42.21 2.90
3541 3740 1.260297 CGTGACAGACGCAAACAATGA 59.740 47.619 0.00 0.00 42.21 2.57
3542 3741 1.662360 CGTGACAGACGCAAACAATG 58.338 50.000 0.00 0.00 42.21 2.82
3552 3751 0.598562 TCAAGAGGAGCGTGACAGAC 59.401 55.000 0.00 0.00 29.81 3.51
3553 3752 1.270826 CTTCAAGAGGAGCGTGACAGA 59.729 52.381 0.00 0.00 34.69 3.41
3554 3753 1.707632 CTTCAAGAGGAGCGTGACAG 58.292 55.000 0.00 0.00 34.69 3.51
3555 3754 0.319900 GCTTCAAGAGGAGCGTGACA 60.320 55.000 0.00 0.00 34.69 3.58
3556 3755 1.016653 GGCTTCAAGAGGAGCGTGAC 61.017 60.000 0.00 0.00 34.69 3.67
3557 3756 1.293498 GGCTTCAAGAGGAGCGTGA 59.707 57.895 0.00 0.00 33.06 4.35
3558 3757 1.743252 GGGCTTCAAGAGGAGCGTG 60.743 63.158 0.00 0.00 0.00 5.34
3559 3758 1.893919 GAGGGCTTCAAGAGGAGCGT 61.894 60.000 0.00 0.00 0.00 5.07
3560 3759 1.153469 GAGGGCTTCAAGAGGAGCG 60.153 63.158 0.00 0.00 0.00 5.03
3561 3760 1.153469 CGAGGGCTTCAAGAGGAGC 60.153 63.158 0.00 0.00 0.00 4.70
3562 3761 1.261238 ACCGAGGGCTTCAAGAGGAG 61.261 60.000 0.00 0.00 0.00 3.69
3563 3762 1.229209 ACCGAGGGCTTCAAGAGGA 60.229 57.895 0.00 0.00 0.00 3.71
3564 3763 1.078848 CACCGAGGGCTTCAAGAGG 60.079 63.158 0.00 0.00 0.00 3.69
3565 3764 1.743252 GCACCGAGGGCTTCAAGAG 60.743 63.158 0.00 0.00 0.00 2.85
3566 3765 2.347490 GCACCGAGGGCTTCAAGA 59.653 61.111 0.00 0.00 0.00 3.02
3567 3766 2.032528 TGCACCGAGGGCTTCAAG 59.967 61.111 0.00 0.00 0.00 3.02
3568 3767 2.032528 CTGCACCGAGGGCTTCAA 59.967 61.111 0.00 0.00 0.00 2.69
3569 3768 4.020617 CCTGCACCGAGGGCTTCA 62.021 66.667 0.00 0.00 0.00 3.02
3570 3769 3.672295 CTCCTGCACCGAGGGCTTC 62.672 68.421 0.00 0.00 33.41 3.86
3571 3770 3.710722 CTCCTGCACCGAGGGCTT 61.711 66.667 0.00 0.00 33.41 4.35
3579 3778 4.554036 GGATCCGGCTCCTGCACC 62.554 72.222 17.33 0.00 41.91 5.01
3580 3779 3.453070 GAGGATCCGGCTCCTGCAC 62.453 68.421 31.11 13.39 45.89 4.57
3581 3780 2.298335 TAGAGGATCCGGCTCCTGCA 62.298 60.000 31.11 15.24 45.89 4.41
3582 3781 1.115930 TTAGAGGATCCGGCTCCTGC 61.116 60.000 31.11 20.56 45.89 4.85
3583 3782 0.676736 GTTAGAGGATCCGGCTCCTG 59.323 60.000 31.11 0.00 45.89 3.86
3585 3784 1.415200 AAGTTAGAGGATCCGGCTCC 58.585 55.000 16.90 16.90 33.66 4.70
3586 3785 3.488363 TCTAAGTTAGAGGATCCGGCTC 58.512 50.000 8.59 0.00 33.66 4.70
3587 3786 3.492337 CTCTAAGTTAGAGGATCCGGCT 58.508 50.000 26.21 10.63 46.70 5.52
3588 3787 3.926821 CTCTAAGTTAGAGGATCCGGC 57.073 52.381 26.21 2.53 46.70 6.13
3597 3796 5.415077 CGTGACTTCCCTTCTCTAAGTTAGA 59.585 44.000 12.05 12.05 33.72 2.10
3598 3797 5.393243 CCGTGACTTCCCTTCTCTAAGTTAG 60.393 48.000 3.29 3.29 33.72 2.34
3599 3798 4.461781 CCGTGACTTCCCTTCTCTAAGTTA 59.538 45.833 0.00 0.00 33.72 2.24
3600 3799 3.258622 CCGTGACTTCCCTTCTCTAAGTT 59.741 47.826 0.00 0.00 33.72 2.66
3601 3800 2.826725 CCGTGACTTCCCTTCTCTAAGT 59.173 50.000 0.00 0.00 36.20 2.24
3602 3801 2.826725 ACCGTGACTTCCCTTCTCTAAG 59.173 50.000 0.00 0.00 0.00 2.18
3603 3802 2.561419 CACCGTGACTTCCCTTCTCTAA 59.439 50.000 0.00 0.00 0.00 2.10
3604 3803 2.168496 CACCGTGACTTCCCTTCTCTA 58.832 52.381 0.00 0.00 0.00 2.43
3605 3804 0.969894 CACCGTGACTTCCCTTCTCT 59.030 55.000 0.00 0.00 0.00 3.10
3606 3805 0.670854 GCACCGTGACTTCCCTTCTC 60.671 60.000 1.65 0.00 0.00 2.87
3607 3806 1.122019 AGCACCGTGACTTCCCTTCT 61.122 55.000 1.65 0.00 0.00 2.85
3608 3807 0.606604 TAGCACCGTGACTTCCCTTC 59.393 55.000 1.65 0.00 0.00 3.46
3609 3808 0.320697 GTAGCACCGTGACTTCCCTT 59.679 55.000 1.65 0.00 0.00 3.95
3610 3809 0.830444 TGTAGCACCGTGACTTCCCT 60.830 55.000 1.65 0.00 0.00 4.20
3611 3810 0.389948 CTGTAGCACCGTGACTTCCC 60.390 60.000 1.65 0.00 0.00 3.97
3612 3811 0.317479 ACTGTAGCACCGTGACTTCC 59.683 55.000 1.65 0.00 0.00 3.46
3613 3812 1.419374 CACTGTAGCACCGTGACTTC 58.581 55.000 1.65 0.00 35.69 3.01
3614 3813 0.600255 GCACTGTAGCACCGTGACTT 60.600 55.000 1.65 0.00 35.69 3.01
3615 3814 1.006102 GCACTGTAGCACCGTGACT 60.006 57.895 1.65 1.79 35.69 3.41
3616 3815 0.600255 AAGCACTGTAGCACCGTGAC 60.600 55.000 1.65 0.00 35.69 3.67
3617 3816 0.599991 CAAGCACTGTAGCACCGTGA 60.600 55.000 1.65 0.00 35.69 4.35
3618 3817 0.880278 ACAAGCACTGTAGCACCGTG 60.880 55.000 0.00 0.00 36.10 4.94
3619 3818 0.600255 GACAAGCACTGTAGCACCGT 60.600 55.000 5.32 0.19 38.84 4.83
3620 3819 0.319900 AGACAAGCACTGTAGCACCG 60.320 55.000 5.32 0.00 38.84 4.94
3621 3820 2.028930 ACTAGACAAGCACTGTAGCACC 60.029 50.000 0.00 0.00 38.84 5.01
3622 3821 2.989840 CACTAGACAAGCACTGTAGCAC 59.010 50.000 0.00 0.00 38.84 4.40
3623 3822 2.628178 ACACTAGACAAGCACTGTAGCA 59.372 45.455 0.00 0.00 38.84 3.49
3624 3823 3.305398 ACACTAGACAAGCACTGTAGC 57.695 47.619 0.00 0.00 38.84 3.58
3625 3824 7.598869 TCATTTTACACTAGACAAGCACTGTAG 59.401 37.037 0.00 0.00 38.84 2.74
3626 3825 7.438564 TCATTTTACACTAGACAAGCACTGTA 58.561 34.615 0.00 0.00 38.84 2.74
3627 3826 6.288294 TCATTTTACACTAGACAAGCACTGT 58.712 36.000 0.00 0.00 42.61 3.55
3628 3827 6.785488 TCATTTTACACTAGACAAGCACTG 57.215 37.500 0.00 0.00 0.00 3.66
3629 3828 7.217200 TCTTCATTTTACACTAGACAAGCACT 58.783 34.615 0.00 0.00 0.00 4.40
3630 3829 7.421530 TCTTCATTTTACACTAGACAAGCAC 57.578 36.000 0.00 0.00 0.00 4.40
3631 3830 7.173218 CCTTCTTCATTTTACACTAGACAAGCA 59.827 37.037 0.00 0.00 0.00 3.91
3632 3831 7.387948 TCCTTCTTCATTTTACACTAGACAAGC 59.612 37.037 0.00 0.00 0.00 4.01
3633 3832 8.833231 TCCTTCTTCATTTTACACTAGACAAG 57.167 34.615 0.00 0.00 0.00 3.16
3634 3833 9.793259 ATTCCTTCTTCATTTTACACTAGACAA 57.207 29.630 0.00 0.00 0.00 3.18
3635 3834 9.219603 CATTCCTTCTTCATTTTACACTAGACA 57.780 33.333 0.00 0.00 0.00 3.41
3636 3835 8.178313 GCATTCCTTCTTCATTTTACACTAGAC 58.822 37.037 0.00 0.00 0.00 2.59
3637 3836 8.103305 AGCATTCCTTCTTCATTTTACACTAGA 58.897 33.333 0.00 0.00 0.00 2.43
3638 3837 8.273780 AGCATTCCTTCTTCATTTTACACTAG 57.726 34.615 0.00 0.00 0.00 2.57
3639 3838 9.383519 CTAGCATTCCTTCTTCATTTTACACTA 57.616 33.333 0.00 0.00 0.00 2.74
3640 3839 7.337942 CCTAGCATTCCTTCTTCATTTTACACT 59.662 37.037 0.00 0.00 0.00 3.55
3641 3840 7.415653 CCCTAGCATTCCTTCTTCATTTTACAC 60.416 40.741 0.00 0.00 0.00 2.90
3642 3841 6.603201 CCCTAGCATTCCTTCTTCATTTTACA 59.397 38.462 0.00 0.00 0.00 2.41
3643 3842 6.828785 TCCCTAGCATTCCTTCTTCATTTTAC 59.171 38.462 0.00 0.00 0.00 2.01
3644 3843 6.828785 GTCCCTAGCATTCCTTCTTCATTTTA 59.171 38.462 0.00 0.00 0.00 1.52
3645 3844 5.654209 GTCCCTAGCATTCCTTCTTCATTTT 59.346 40.000 0.00 0.00 0.00 1.82
3646 3845 5.044550 AGTCCCTAGCATTCCTTCTTCATTT 60.045 40.000 0.00 0.00 0.00 2.32
3647 3846 4.476479 AGTCCCTAGCATTCCTTCTTCATT 59.524 41.667 0.00 0.00 0.00 2.57
3648 3847 4.043596 AGTCCCTAGCATTCCTTCTTCAT 58.956 43.478 0.00 0.00 0.00 2.57
3649 3848 3.454858 AGTCCCTAGCATTCCTTCTTCA 58.545 45.455 0.00 0.00 0.00 3.02
3650 3849 5.816955 ATAGTCCCTAGCATTCCTTCTTC 57.183 43.478 0.00 0.00 0.00 2.87
3651 3850 6.239743 GCTAATAGTCCCTAGCATTCCTTCTT 60.240 42.308 0.00 0.00 40.27 2.52
3652 3851 5.247337 GCTAATAGTCCCTAGCATTCCTTCT 59.753 44.000 0.00 0.00 40.27 2.85
3653 3852 5.012148 TGCTAATAGTCCCTAGCATTCCTTC 59.988 44.000 0.00 0.00 44.26 3.46
3654 3853 4.907875 TGCTAATAGTCCCTAGCATTCCTT 59.092 41.667 0.00 0.00 44.26 3.36
3655 3854 4.493618 TGCTAATAGTCCCTAGCATTCCT 58.506 43.478 0.00 0.00 44.26 3.36
3656 3855 4.891992 TGCTAATAGTCCCTAGCATTCC 57.108 45.455 0.00 0.00 44.26 3.01
3660 3859 3.330126 ACCTGCTAATAGTCCCTAGCA 57.670 47.619 3.93 3.93 46.32 3.49
3661 3860 6.361768 AATAACCTGCTAATAGTCCCTAGC 57.638 41.667 0.00 0.00 40.82 3.42
3662 3861 9.091220 AGTAAATAACCTGCTAATAGTCCCTAG 57.909 37.037 0.00 0.00 0.00 3.02
3663 3862 9.443365 AAGTAAATAACCTGCTAATAGTCCCTA 57.557 33.333 0.00 0.00 0.00 3.53
3664 3863 7.932683 AGTAAATAACCTGCTAATAGTCCCT 57.067 36.000 0.00 0.00 0.00 4.20
3665 3864 8.975663 AAAGTAAATAACCTGCTAATAGTCCC 57.024 34.615 0.00 0.00 0.00 4.46
3668 3867 9.749340 ACCAAAAGTAAATAACCTGCTAATAGT 57.251 29.630 0.00 0.00 0.00 2.12
3725 3924 9.480053 CAAACAAGTTGATGGTGAGATAAAATT 57.520 29.630 10.54 0.00 39.87 1.82
3726 3925 8.641541 ACAAACAAGTTGATGGTGAGATAAAAT 58.358 29.630 10.54 0.00 39.87 1.82
3727 3926 8.006298 ACAAACAAGTTGATGGTGAGATAAAA 57.994 30.769 10.54 0.00 39.87 1.52
3728 3927 7.581213 ACAAACAAGTTGATGGTGAGATAAA 57.419 32.000 10.54 0.00 39.87 1.40
3729 3928 8.729756 CATACAAACAAGTTGATGGTGAGATAA 58.270 33.333 10.54 0.00 39.87 1.75
3730 3929 7.882791 ACATACAAACAAGTTGATGGTGAGATA 59.117 33.333 10.54 0.00 39.87 1.98
3731 3930 6.716628 ACATACAAACAAGTTGATGGTGAGAT 59.283 34.615 10.54 0.00 39.87 2.75
3732 3931 6.017192 CACATACAAACAAGTTGATGGTGAGA 60.017 38.462 10.54 0.00 39.87 3.27
3733 3932 6.017192 TCACATACAAACAAGTTGATGGTGAG 60.017 38.462 10.54 9.84 39.87 3.51
3734 3933 5.825151 TCACATACAAACAAGTTGATGGTGA 59.175 36.000 10.54 12.84 39.87 4.02
3735 3934 6.070897 TCACATACAAACAAGTTGATGGTG 57.929 37.500 10.54 12.69 39.87 4.17
3736 3935 6.489700 TGATCACATACAAACAAGTTGATGGT 59.510 34.615 10.54 3.90 39.87 3.55
3737 3936 6.912082 TGATCACATACAAACAAGTTGATGG 58.088 36.000 10.54 0.00 39.87 3.51
3738 3937 7.587629 ACTGATCACATACAAACAAGTTGATG 58.412 34.615 10.54 10.51 39.87 3.07
3739 3938 7.750229 ACTGATCACATACAAACAAGTTGAT 57.250 32.000 10.54 0.00 39.87 2.57
3740 3939 8.669946 TTACTGATCACATACAAACAAGTTGA 57.330 30.769 10.54 0.00 39.87 3.18
3741 3940 9.897744 AATTACTGATCACATACAAACAAGTTG 57.102 29.630 0.00 0.00 43.43 3.16
3812 4011 9.819267 GCTACAGTATCCTAACTTTTCTATTGT 57.181 33.333 0.00 0.00 0.00 2.71
3816 4015 9.476928 AGAAGCTACAGTATCCTAACTTTTCTA 57.523 33.333 0.00 0.00 0.00 2.10
3817 4016 8.368962 AGAAGCTACAGTATCCTAACTTTTCT 57.631 34.615 0.00 0.00 0.00 2.52
3818 4017 8.471609 AGAGAAGCTACAGTATCCTAACTTTTC 58.528 37.037 0.00 0.00 0.00 2.29
3819 4018 8.368962 AGAGAAGCTACAGTATCCTAACTTTT 57.631 34.615 0.00 0.00 0.00 2.27
3820 4019 7.964666 AGAGAAGCTACAGTATCCTAACTTT 57.035 36.000 0.00 0.00 0.00 2.66
3821 4020 8.905850 GTTAGAGAAGCTACAGTATCCTAACTT 58.094 37.037 0.00 0.00 33.96 2.66
3822 4021 8.053963 TGTTAGAGAAGCTACAGTATCCTAACT 58.946 37.037 0.00 0.00 36.27 2.24
3823 4022 8.223177 TGTTAGAGAAGCTACAGTATCCTAAC 57.777 38.462 0.00 0.00 36.00 2.34
3824 4023 8.998277 ATGTTAGAGAAGCTACAGTATCCTAA 57.002 34.615 0.00 0.00 0.00 2.69
3825 4024 7.666388 GGATGTTAGAGAAGCTACAGTATCCTA 59.334 40.741 0.00 0.00 0.00 2.94
3826 4025 6.492087 GGATGTTAGAGAAGCTACAGTATCCT 59.508 42.308 0.00 0.00 0.00 3.24
3827 4026 6.294843 GGGATGTTAGAGAAGCTACAGTATCC 60.295 46.154 0.00 0.00 0.00 2.59
3828 4027 6.492087 AGGGATGTTAGAGAAGCTACAGTATC 59.508 42.308 0.00 0.00 0.00 2.24
3829 4028 6.377912 AGGGATGTTAGAGAAGCTACAGTAT 58.622 40.000 0.00 0.00 0.00 2.12
3830 4029 5.767670 AGGGATGTTAGAGAAGCTACAGTA 58.232 41.667 0.00 0.00 0.00 2.74
3831 4030 4.615513 AGGGATGTTAGAGAAGCTACAGT 58.384 43.478 0.00 0.00 0.00 3.55
3832 4031 5.105146 ACAAGGGATGTTAGAGAAGCTACAG 60.105 44.000 0.00 0.00 40.06 2.74
3833 4032 4.777896 ACAAGGGATGTTAGAGAAGCTACA 59.222 41.667 0.00 0.00 40.06 2.74
3834 4033 5.112686 CACAAGGGATGTTAGAGAAGCTAC 58.887 45.833 0.00 0.00 41.46 3.58
3835 4034 4.777896 ACACAAGGGATGTTAGAGAAGCTA 59.222 41.667 0.00 0.00 41.46 3.32
3836 4035 3.584848 ACACAAGGGATGTTAGAGAAGCT 59.415 43.478 0.00 0.00 41.46 3.74
3837 4036 3.944087 ACACAAGGGATGTTAGAGAAGC 58.056 45.455 0.00 0.00 41.46 3.86
3838 4037 6.644347 ACATACACAAGGGATGTTAGAGAAG 58.356 40.000 0.00 0.00 41.46 2.85
3839 4038 6.620877 ACATACACAAGGGATGTTAGAGAA 57.379 37.500 0.00 0.00 41.46 2.87
3840 4039 6.620877 AACATACACAAGGGATGTTAGAGA 57.379 37.500 3.17 0.00 41.46 3.10
3844 4043 6.670464 TCCTCTAACATACACAAGGGATGTTA 59.330 38.462 10.70 10.70 42.35 2.41
3845 4044 5.487488 TCCTCTAACATACACAAGGGATGTT 59.513 40.000 9.61 9.61 44.07 2.71
3846 4045 5.030147 TCCTCTAACATACACAAGGGATGT 58.970 41.667 0.00 0.00 45.34 3.06
3847 4046 5.614324 TCCTCTAACATACACAAGGGATG 57.386 43.478 0.00 0.00 0.00 3.51
3848 4047 6.146760 AGATCCTCTAACATACACAAGGGAT 58.853 40.000 0.00 0.00 34.29 3.85
3849 4048 5.529289 AGATCCTCTAACATACACAAGGGA 58.471 41.667 0.00 0.00 0.00 4.20
3850 4049 5.878406 AGATCCTCTAACATACACAAGGG 57.122 43.478 0.00 0.00 0.00 3.95
3851 4050 6.266558 AGCTAGATCCTCTAACATACACAAGG 59.733 42.308 0.00 0.00 0.00 3.61
3852 4051 7.283625 AGCTAGATCCTCTAACATACACAAG 57.716 40.000 0.00 0.00 0.00 3.16
3853 4052 6.265649 GGAGCTAGATCCTCTAACATACACAA 59.734 42.308 20.01 0.00 36.35 3.33
3854 4053 5.770663 GGAGCTAGATCCTCTAACATACACA 59.229 44.000 20.01 0.00 36.35 3.72
3855 4054 5.106475 CGGAGCTAGATCCTCTAACATACAC 60.106 48.000 24.01 0.00 37.20 2.90
3856 4055 5.004448 CGGAGCTAGATCCTCTAACATACA 58.996 45.833 24.01 0.00 37.20 2.29
3857 4056 5.005094 ACGGAGCTAGATCCTCTAACATAC 58.995 45.833 24.01 0.00 37.20 2.39
3858 4057 5.244189 ACGGAGCTAGATCCTCTAACATA 57.756 43.478 24.01 0.00 37.20 2.29
3859 4058 4.076394 GACGGAGCTAGATCCTCTAACAT 58.924 47.826 24.01 1.58 37.20 2.71
3860 4059 3.478509 GACGGAGCTAGATCCTCTAACA 58.521 50.000 24.01 0.00 37.20 2.41
3861 4060 2.481185 CGACGGAGCTAGATCCTCTAAC 59.519 54.545 24.01 9.83 37.20 2.34
3862 4061 2.550423 CCGACGGAGCTAGATCCTCTAA 60.550 54.545 24.01 0.00 37.20 2.10
3863 4062 1.002201 CCGACGGAGCTAGATCCTCTA 59.998 57.143 24.01 0.00 37.20 2.43
3864 4063 0.250553 CCGACGGAGCTAGATCCTCT 60.251 60.000 24.01 9.50 37.20 3.69
3865 4064 0.535553 ACCGACGGAGCTAGATCCTC 60.536 60.000 24.01 17.95 37.20 3.71
3866 4065 0.820074 CACCGACGGAGCTAGATCCT 60.820 60.000 24.01 11.61 37.20 3.24
3867 4066 1.655329 CACCGACGGAGCTAGATCC 59.345 63.158 23.38 17.43 35.88 3.36
3868 4067 1.008309 GCACCGACGGAGCTAGATC 60.008 63.158 26.34 0.00 36.40 2.75
3869 4068 1.109920 ATGCACCGACGGAGCTAGAT 61.110 55.000 31.53 17.55 39.93 1.98
3870 4069 0.464916 TATGCACCGACGGAGCTAGA 60.465 55.000 31.53 16.13 39.93 2.43
3871 4070 0.039978 CTATGCACCGACGGAGCTAG 60.040 60.000 31.53 24.73 39.93 3.42
3872 4071 1.452953 CCTATGCACCGACGGAGCTA 61.453 60.000 31.53 20.40 39.93 3.32
3873 4072 2.786495 CCTATGCACCGACGGAGCT 61.786 63.158 31.53 20.90 39.93 4.09
3874 4073 2.279517 CCTATGCACCGACGGAGC 60.280 66.667 26.79 26.79 39.68 4.70
3875 4074 0.742505 TAACCTATGCACCGACGGAG 59.257 55.000 23.38 14.88 0.00 4.63
3876 4075 0.457035 GTAACCTATGCACCGACGGA 59.543 55.000 23.38 0.00 0.00 4.69
3877 4076 0.173935 TGTAACCTATGCACCGACGG 59.826 55.000 13.61 13.61 0.00 4.79
3878 4077 2.218953 ATGTAACCTATGCACCGACG 57.781 50.000 0.00 0.00 0.00 5.12
3879 4078 9.674824 GTATATATATGTAACCTATGCACCGAC 57.325 37.037 5.44 0.00 0.00 4.79
3880 4079 9.636789 AGTATATATATGTAACCTATGCACCGA 57.363 33.333 5.44 0.00 0.00 4.69
3881 4080 9.678941 CAGTATATATATGTAACCTATGCACCG 57.321 37.037 5.44 0.00 0.00 4.94
3899 4098 9.090103 CCCTCAAGTAAACCAGATCAGTATATA 57.910 37.037 0.00 0.00 0.00 0.86
3900 4099 7.569111 ACCCTCAAGTAAACCAGATCAGTATAT 59.431 37.037 0.00 0.00 0.00 0.86
3901 4100 6.901300 ACCCTCAAGTAAACCAGATCAGTATA 59.099 38.462 0.00 0.00 0.00 1.47
3902 4101 5.726793 ACCCTCAAGTAAACCAGATCAGTAT 59.273 40.000 0.00 0.00 0.00 2.12
3903 4102 5.046591 CACCCTCAAGTAAACCAGATCAGTA 60.047 44.000 0.00 0.00 0.00 2.74
3904 4103 3.910627 ACCCTCAAGTAAACCAGATCAGT 59.089 43.478 0.00 0.00 0.00 3.41
3905 4104 4.256920 CACCCTCAAGTAAACCAGATCAG 58.743 47.826 0.00 0.00 0.00 2.90
3906 4105 3.650942 ACACCCTCAAGTAAACCAGATCA 59.349 43.478 0.00 0.00 0.00 2.92
3907 4106 4.287766 ACACCCTCAAGTAAACCAGATC 57.712 45.455 0.00 0.00 0.00 2.75
3908 4107 4.351111 AGAACACCCTCAAGTAAACCAGAT 59.649 41.667 0.00 0.00 0.00 2.90
3909 4108 3.714798 AGAACACCCTCAAGTAAACCAGA 59.285 43.478 0.00 0.00 0.00 3.86
3910 4109 4.065789 GAGAACACCCTCAAGTAAACCAG 58.934 47.826 0.00 0.00 33.50 4.00
3911 4110 3.181448 GGAGAACACCCTCAAGTAAACCA 60.181 47.826 0.00 0.00 34.94 3.67
3912 4111 3.181448 TGGAGAACACCCTCAAGTAAACC 60.181 47.826 0.00 0.00 34.94 3.27
3913 4112 4.081322 TGGAGAACACCCTCAAGTAAAC 57.919 45.455 0.00 0.00 34.94 2.01
3914 4113 4.562757 CGATGGAGAACACCCTCAAGTAAA 60.563 45.833 0.00 0.00 34.94 2.01
3915 4114 3.056107 CGATGGAGAACACCCTCAAGTAA 60.056 47.826 0.00 0.00 34.94 2.24
3916 4115 2.496070 CGATGGAGAACACCCTCAAGTA 59.504 50.000 0.00 0.00 34.94 2.24
3917 4116 1.276421 CGATGGAGAACACCCTCAAGT 59.724 52.381 0.00 0.00 34.94 3.16
3918 4117 1.276421 ACGATGGAGAACACCCTCAAG 59.724 52.381 0.00 0.00 34.94 3.02
3919 4118 1.001974 CACGATGGAGAACACCCTCAA 59.998 52.381 0.00 0.00 34.94 3.02
3920 4119 0.608130 CACGATGGAGAACACCCTCA 59.392 55.000 0.00 0.00 34.94 3.86
3921 4120 0.608640 ACACGATGGAGAACACCCTC 59.391 55.000 0.00 0.00 0.00 4.30
3922 4121 1.056660 AACACGATGGAGAACACCCT 58.943 50.000 0.00 0.00 0.00 4.34
3923 4122 1.156736 CAACACGATGGAGAACACCC 58.843 55.000 0.00 0.00 0.00 4.61
3924 4123 0.517316 GCAACACGATGGAGAACACC 59.483 55.000 0.00 0.00 0.00 4.16
3925 4124 1.512926 AGCAACACGATGGAGAACAC 58.487 50.000 0.00 0.00 0.00 3.32
3926 4125 1.872952 CAAGCAACACGATGGAGAACA 59.127 47.619 0.00 0.00 0.00 3.18
3927 4126 1.197721 CCAAGCAACACGATGGAGAAC 59.802 52.381 0.00 0.00 34.82 3.01
3928 4127 1.202758 ACCAAGCAACACGATGGAGAA 60.203 47.619 0.00 0.00 36.75 2.87
3929 4128 0.396435 ACCAAGCAACACGATGGAGA 59.604 50.000 0.00 0.00 36.75 3.71
3930 4129 0.518636 CACCAAGCAACACGATGGAG 59.481 55.000 0.00 0.00 36.75 3.86
3931 4130 0.888736 CCACCAAGCAACACGATGGA 60.889 55.000 0.00 0.00 36.75 3.41
3932 4131 1.172180 ACCACCAAGCAACACGATGG 61.172 55.000 0.00 0.00 38.91 3.51
3933 4132 0.040157 CACCACCAAGCAACACGATG 60.040 55.000 0.00 0.00 0.00 3.84
3934 4133 0.465460 ACACCACCAAGCAACACGAT 60.465 50.000 0.00 0.00 0.00 3.73
3935 4134 1.078072 ACACCACCAAGCAACACGA 60.078 52.632 0.00 0.00 0.00 4.35
3936 4135 1.355210 GACACCACCAAGCAACACG 59.645 57.895 0.00 0.00 0.00 4.49
3937 4136 1.733526 GGACACCACCAAGCAACAC 59.266 57.895 0.00 0.00 0.00 3.32
3938 4137 1.454847 GGGACACCACCAAGCAACA 60.455 57.895 0.00 0.00 36.50 3.33
3939 4138 1.454847 TGGGACACCACCAAGCAAC 60.455 57.895 0.00 0.00 43.37 4.17
3940 4139 3.011014 TGGGACACCACCAAGCAA 58.989 55.556 0.00 0.00 43.37 3.91
3952 4151 1.280421 AGCAGAAGAAGACCATGGGAC 59.720 52.381 18.09 9.91 0.00 4.46
3953 4152 1.280133 CAGCAGAAGAAGACCATGGGA 59.720 52.381 18.09 0.00 0.00 4.37
3954 4153 1.747709 CAGCAGAAGAAGACCATGGG 58.252 55.000 18.09 0.00 0.00 4.00
3955 4154 1.093159 GCAGCAGAAGAAGACCATGG 58.907 55.000 11.19 11.19 0.00 3.66
3956 4155 2.110901 AGCAGCAGAAGAAGACCATG 57.889 50.000 0.00 0.00 0.00 3.66
3957 4156 2.818432 CAAAGCAGCAGAAGAAGACCAT 59.182 45.455 0.00 0.00 0.00 3.55
3958 4157 2.224606 CAAAGCAGCAGAAGAAGACCA 58.775 47.619 0.00 0.00 0.00 4.02
3959 4158 1.068679 GCAAAGCAGCAGAAGAAGACC 60.069 52.381 0.00 0.00 0.00 3.85
3960 4159 1.878734 AGCAAAGCAGCAGAAGAAGAC 59.121 47.619 0.00 0.00 36.85 3.01
3961 4160 2.267174 AGCAAAGCAGCAGAAGAAGA 57.733 45.000 0.00 0.00 36.85 2.87
3962 4161 4.155462 TGATTAGCAAAGCAGCAGAAGAAG 59.845 41.667 0.00 0.00 36.85 2.85
3963 4162 4.074259 TGATTAGCAAAGCAGCAGAAGAA 58.926 39.130 0.00 0.00 36.85 2.52
3964 4163 3.438087 GTGATTAGCAAAGCAGCAGAAGA 59.562 43.478 0.00 0.00 36.85 2.87
3965 4164 3.727079 CGTGATTAGCAAAGCAGCAGAAG 60.727 47.826 0.00 0.00 36.85 2.85
3966 4165 2.160219 CGTGATTAGCAAAGCAGCAGAA 59.840 45.455 0.00 0.00 36.85 3.02
3967 4166 1.733912 CGTGATTAGCAAAGCAGCAGA 59.266 47.619 0.00 0.00 36.85 4.26
3968 4167 1.202110 CCGTGATTAGCAAAGCAGCAG 60.202 52.381 0.00 0.00 36.85 4.24
3969 4168 0.804364 CCGTGATTAGCAAAGCAGCA 59.196 50.000 0.00 0.00 36.85 4.41
3970 4169 0.099436 CCCGTGATTAGCAAAGCAGC 59.901 55.000 0.00 0.00 30.14 5.25
3971 4170 1.737838 TCCCGTGATTAGCAAAGCAG 58.262 50.000 0.00 0.00 30.14 4.24
3972 4171 2.092968 AGATCCCGTGATTAGCAAAGCA 60.093 45.455 0.00 0.00 0.00 3.91
3973 4172 2.545946 GAGATCCCGTGATTAGCAAAGC 59.454 50.000 0.00 0.00 0.00 3.51
3974 4173 3.797039 TGAGATCCCGTGATTAGCAAAG 58.203 45.455 0.00 0.00 0.00 2.77
3975 4174 3.797039 CTGAGATCCCGTGATTAGCAAA 58.203 45.455 0.00 0.00 0.00 3.68
3976 4175 2.483714 GCTGAGATCCCGTGATTAGCAA 60.484 50.000 7.48 0.00 35.03 3.91
3977 4176 1.069204 GCTGAGATCCCGTGATTAGCA 59.931 52.381 7.48 0.00 35.03 3.49
3978 4177 1.789506 GCTGAGATCCCGTGATTAGC 58.210 55.000 0.00 0.00 0.00 3.09
3979 4178 1.338337 ACGCTGAGATCCCGTGATTAG 59.662 52.381 0.00 0.00 33.46 1.73
3980 4179 1.337071 GACGCTGAGATCCCGTGATTA 59.663 52.381 3.53 0.00 35.06 1.75
3981 4180 0.103208 GACGCTGAGATCCCGTGATT 59.897 55.000 3.53 0.00 35.06 2.57
3982 4181 1.736586 GACGCTGAGATCCCGTGAT 59.263 57.895 3.53 0.00 35.06 3.06
3983 4182 2.415608 GGACGCTGAGATCCCGTGA 61.416 63.158 3.53 0.00 35.06 4.35
3984 4183 2.021068 ATGGACGCTGAGATCCCGTG 62.021 60.000 3.53 0.00 35.06 4.94
3985 4184 1.758514 ATGGACGCTGAGATCCCGT 60.759 57.895 1.31 0.00 37.99 5.28
3986 4185 1.300465 CATGGACGCTGAGATCCCG 60.300 63.158 1.31 0.00 33.69 5.14
3987 4186 0.531532 CACATGGACGCTGAGATCCC 60.532 60.000 0.00 0.00 33.69 3.85
3988 4187 0.176680 ACACATGGACGCTGAGATCC 59.823 55.000 0.00 0.00 35.37 3.36
3989 4188 1.929836 GAACACATGGACGCTGAGATC 59.070 52.381 0.00 0.00 0.00 2.75
3990 4189 1.552337 AGAACACATGGACGCTGAGAT 59.448 47.619 0.00 0.00 0.00 2.75
3991 4190 0.969149 AGAACACATGGACGCTGAGA 59.031 50.000 0.00 0.00 0.00 3.27
3992 4191 2.263077 GTAGAACACATGGACGCTGAG 58.737 52.381 0.00 0.00 0.00 3.35
3993 4192 1.616374 TGTAGAACACATGGACGCTGA 59.384 47.619 0.00 0.00 30.04 4.26
3994 4193 2.078849 TGTAGAACACATGGACGCTG 57.921 50.000 0.00 0.00 30.04 5.18
3995 4194 2.831685 TTGTAGAACACATGGACGCT 57.168 45.000 0.00 0.00 36.90 5.07
3996 4195 3.188460 ACATTTGTAGAACACATGGACGC 59.812 43.478 10.09 0.00 39.80 5.19
3997 4196 5.356882 AACATTTGTAGAACACATGGACG 57.643 39.130 10.09 0.00 39.80 4.79
3998 4197 6.991485 CAAACATTTGTAGAACACATGGAC 57.009 37.500 10.09 0.00 39.80 4.02
4012 4211 5.462034 TTTCGCCAAGAAACAAACATTTG 57.538 34.783 2.77 2.77 43.35 2.32
4022 4221 3.888930 AGAATGGACTTTTCGCCAAGAAA 59.111 39.130 0.00 0.00 46.22 2.52
4023 4222 3.253188 CAGAATGGACTTTTCGCCAAGAA 59.747 43.478 0.00 0.00 37.78 2.52
4024 4223 2.813754 CAGAATGGACTTTTCGCCAAGA 59.186 45.455 0.00 0.00 37.78 3.02
4025 4224 2.669391 GCAGAATGGACTTTTCGCCAAG 60.669 50.000 0.00 0.00 37.78 3.61
4026 4225 1.269448 GCAGAATGGACTTTTCGCCAA 59.731 47.619 0.00 0.00 37.78 4.52
4027 4226 0.881118 GCAGAATGGACTTTTCGCCA 59.119 50.000 0.00 0.00 38.78 5.69
4028 4227 0.881118 TGCAGAATGGACTTTTCGCC 59.119 50.000 0.00 0.00 35.86 5.54
4037 4236 2.244117 GAGCTCGGGTGCAGAATGGA 62.244 60.000 0.00 0.00 35.86 3.41
4038 4237 1.817099 GAGCTCGGGTGCAGAATGG 60.817 63.158 0.00 0.00 35.86 3.16
4039 4238 0.463295 ATGAGCTCGGGTGCAGAATG 60.463 55.000 9.64 0.00 40.87 2.67
4040 4239 1.123077 TATGAGCTCGGGTGCAGAAT 58.877 50.000 9.64 0.00 34.99 2.40
4041 4240 1.123077 ATATGAGCTCGGGTGCAGAA 58.877 50.000 9.64 0.00 34.99 3.02
4042 4241 0.390492 CATATGAGCTCGGGTGCAGA 59.610 55.000 9.64 0.00 34.99 4.26
4043 4242 1.226686 GCATATGAGCTCGGGTGCAG 61.227 60.000 23.72 7.32 34.99 4.41
4044 4243 1.227645 GCATATGAGCTCGGGTGCA 60.228 57.895 23.72 2.95 34.99 4.57
4045 4244 1.070445 AGCATATGAGCTCGGGTGC 59.930 57.895 22.13 22.13 42.18 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.