>input_sequence_38476
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--------------------------------------------ATGGCAGTAGAGTTGTTGATGCTCCCGGATGAGCTC
TTCGAAGAGATCCTCCTCCGGCTT-CCCCCCGATGAGCCAGCCTGCCTCCTCCGTGCCTCCCTTGTTTGCAAGGCCTGGG
GTTGCGCCGTCACCCGTCCCAGCCTCCGCCGTCGCCTCCACGAGCTCCATCGTACAACCCCCGTGCTTGGCTTCCTGCAC
GACCGTCGCGACAAGAGCATCTCAGACTTCATCCCTACCACAATATCGTCCTTCTCACTCATCGTTCCAGACCGCCGGTG
CTGGCGGGCCCTCGACTGCCGCCACGGTCGGGTCCTCTTTCTCTCTAACTCCAAGGGCCAAAGCACTGAGGAATTTCTCC
TGTGGGAGCCAATCACGGGTGCCCAACAGCGCATACCGGTGCCCGTGGCTTATGACAACATAAGTGCGAACATGATTGTG
TACCCACCTGCCGCCGTGTTCTGCACAGCGGACGGGTGCGACCACCACGACTGCCTGGGGGGGCCTTTCTGCGTGTTGTT
CATCTTCTCTGTCAACAACGTAGACACTGATGACGACACTGACGATGACGG---TGTCACGTGGGCAGGTATATACTCGT
CAGAAACTGGCACCTGGGGCGAGCTGACCTCATTGCAACCCTTCTG------GCCCATGTGCTTCACATTTTATTCTAGT
GTGCTTGTTGGGAGGTCTTTGCTCTACTTCATGTTTGATGATGGGTCCATCCTAGAGTATGACCTTGCACGGCACGGTCT
GGCTGTGGTTGATCCACCTGAGTCAGACTACAT---CGACCA---A---TGTAACATCATGCTGGTGGAGGACGGTGGAC
TAGGTGTTAATGAAGTTGTGAATTTGCACCTCAAATTGTGGGCACGGGAGGCGAGTGATATCACTGATGCACGATGGGTG
CTGAGCCGAGTCATCTACCTCGGCAGTTTG---CTCCCAATTAGTGCTTTCGTGGGTGCAGAGACTAGGGTGCTAGTGTT
GGGCTTTGCCGAGGGAGCAAATGCCATCTTCGTGACCACGGTTGCTGGCGTCTTCATGATCAAACTACAATCAAATAGGG
TGAGAAAGGTGTG---------CGATGATCATGGCTTTTGTAATTTGATTCCACTTGTCAGCTTCTACACTCCTATGCCT
CGAGTTGAGCACAAGGATCCGTCGTTGAAGCATAGTGAGGAGGCAGATGGTACCGACCAAGAAGGGGAGGAGGAGAAGAC
AGCAGATCATGCACAACAGTTGATTAACA--ATGGGTCCAATGTTAACAAGGAGGGGGACTTTGTTAACATCCTTGAATG
CGCTATCCATGCCACAGAGAACAGGTTAGTTCGGT----------------------GCTGAAGCATGCCAATGTATTCT
TTGTGTGGAAAATAAATTGCAAGTATTTCAGTGCTC-TTTTGGGTCTGTAATTGTTC--TAACATGCCCCTTGCTGCTCT
AGGCCTTTGGCTTTTGTAGTTT-------------------GGTTTCAGATGTTCTATGGTAATGTGATTACTGAGCTAT
GAGTGTGTTGCTGTTTGAGATGTTAGTCGAGAGCAATACTTGGGAGTTAGAGCCTAGTATGTTCTGTTGTGATTAGC---
-----ATCATTTTTATATCAAAGTTCAGGTACCATGCTAATCTACTTGGGAAATGTTATATGTGTCCAGTACTGGCTAGT
TACAAATATCTCACCACTCCGCAGTTTATCCGTATAGTACTTTACTTCATAATGTGTGCAAACACTAGCCAGTTGTTAGA
AAAGGCAGTCAACAGAACAAAGCTATCTCCTTGTGTCGTCAAATTGGATGACAGAATTATTTTAGTTGTGCTTTTCTATC
ATAGACCACAGTAACTTTCTGCCTTGTGTTATAGTCCTTGACA-TATAGACAGAAACTGAATG-CCTTTATTGTCAGGGT
TCCATCACCTTGTGGGGAAGTTGCTCCAAGGTGTACCAGCACGGTCAACAAATGTGGATGCAGCTTGCTATGTGAAGCTC
AAGAGGCGTCTGATCCTTTGGGCGATGTCCCCAAGAGTGCACGGAATGAAGAATCCGTGAAGAGTTCAGATAGTATCAAC
AAAGATGGCGCTGGGAACCCAAAAAACCTGCAGTAG--------------------------------------------
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>chr5B_1_TraesCS5B01G505700
CGGCGTGCAGCACCGGGACCACTGGCGTGCGGCTCCATAGCAACACCAAGCGCGGCAAGAAAACTTCAACGCAGCACCGA
CGACGTCTCCGGCTAAGCTTCATTGCAGCTCCAGCAGCGCTCTATTGCAGCCACAGCAGC-GCTCCATTGCAACTCTAGC
ACGCGAGAAGAAGCTCCAACGCAGCACCGGTGGCGAGCAGCCCAGCCTCCTCCTGCGTGCTGCGTTGCAGCATGGGCGCC
CGCCTCCGGCCTTCGCACTGCGTTGCAACACCGGCGGTGAGCAGCCCAGCCTCCTCCTGCGTGCTGTGTTGCATCACTGG
CGGCGAGCGGTGTCGCCCTCCTGCCTTCGTGCTGCGTTGCAACACCGGCTGTGAGGACCAACAGCTGGTGGTTGCGACCC
CCCTCATTCGCGGCA---ACAACAACTAATTGTGCCGGGACGCAGCAGGCGGTGGTTGTCGTCGTCCCTCCCGATTCGCA
GCTGTGGTGGCTGGTGGTCGGCGTTGCCATGGAAGCCCTCCCCTCTCGGATGTGAAGAACAAGAGATGGGGAAAGGAAAG
AGACGAACACGGAGAACGCGTGGAGAAGAGTGAAGGGATAAGGCTGAGGGGAAGCGGTGGACTAGCCCACAAGGGCACGT
GTCGAGCAGAGGGCGAGGTTTACGACATGAGAGATCAGTTGGTTGGAAATAAACGTTTTCCATATTTTTATCACTTGCTC
TGTTCACCATATACACGACTGACATGTGGGCTCACTTTTGTTGAGGTGTTTTTCTAAGAAAACTATTATAGAAATGAGGG
ACACAAGTGTCTTTTCACGTGCCAAGTAATACCGTCTGCTGAAAATATGGAGGGTAGTGTTGGGAAGGAAATTCAGAACC
AATGTCAAATAGGGAAGAAAATAATTTTCAGATCAAATAGGAGAGACATGCCTAACCCCTTTTAACAAACTGCTTGGGCT
GAAGCATTCCACTCAACCACCCAGATCCAGATCTAGAGACCACCATGGCAGTAGAGTTGTTGATGCTCCCGGATGAGCTC
TTCGAAGAGATCCTCCTCCGGCTT-CCCCCCGATGAGCCAGCCTGCCTCCTCCGTGCCTCCCTTGTTTGCAAGGCCTGGG
GTTGCGCCGTCACCCGTCCCAGCCTCCGCCGTCGCCTCCACGAGCTCCATCGTACAACCCCCGTGCTTGGCTTCCTGCAC
GACCGTCGCGACAAGAGCATCTCAGACTTCATCCCTACCACAATATCGTCCTTCTCACTCATCGTTCCAGACCGCCGGTG
CTGGCGGGCCCTCGACTGCCGCCACGGTCGGGTCCTCTTTCTCTCTAACTCCAAGGGCCAAAGCACTGAGGAATTTCTCC
TGTGGGAGCCAATCACGGGTGCCCAACAGCGCATACCGGTGCCCGTGGCTTATGACAACATAAGTGCGAACATGATTGTG
TACCCACCTGCCGCCGTGTTCTGCACAGCGGACGGGTGCGACCACCACGACTGCCTGGGGGGGCCTTTCTGCGTGTTGTT
CATCTTCTCTGTCAACAACGTAGACACTGATGACGACACTGACGATGACGG---TGTCACGTGGGCAGGTATATACTCGT
CAGAAACTGGCACCTGGGGCGAGCTGACCTCATTGCAACCCTTCTG------GCCCATGTGCTTCACATTTTATTCTAGT
GTGCTTGTTGGGAGGTCTTTGCTCTACTTCATGTTTGATGATGGGTCCATCCTAGAGTATGACCTTGCACGGCACGGTCT
GGCTGTGGTTGATCCACCTGAGTCAGACTACAT---CGACCA---A---TGTAACATCATGCTGGTGGAGGACGGTGGAC
TAGGTGTTAATGAAGTTGTGAATTTGCACCTCAAATTGTGGGCACGGGAGGCGAGTGATATCACTGATGCACGATGGGTG
CTGAGCCGAGTCATCTACCTCGGCAGTTTG---CTCCCAATTAGTGCTTTCGTGGGTGCAGAGACTAGGGTGCTAGTGTT
GGGCTTTGCCGAGGGAGCAAATGCCATCTTCGTGACCACGGTTGCTGGCGTCTTCATGATCAAACTACAATCAAATAGGG
TGAGAAAGGTGTG---------CGATGATCATGGCTTTTGTAATTTGATTCCACTTGTCAGCTTCTACACTCCTATGCCT
CGAGTTGAGCACAAGGATCCGTCGTTGAAGCATAGTGAGGAGGCAGATGGTACCGACCAAGAAGGGGAGGAGGAGAAGAC
AGCAGATCATGCACAACAGTTGATTAACA--ATGGGTCCAATGTTAACAAGGAGGGGGACTTTGTTAACATCCTTGAATG
CGCTATCCATGCCACAGAGAACAGGTTAGTTCGGT----------------------GCTGAAGCATGCCAATGTATTCT
TTGTGTGGAAAATAAATTGCAAGTATTTCAGTGCTC-TTTTGGGTCTGTAATTGTTC--TAACATGCCCCTTGCTGCTCT
AGGCCTTTGGCTTTTGTAGTTT-------------------GGTTTCAGATGTTCTATGGTAATGTGATTACTGAGCTAT
GAGTGTGTTGCTGTTTGAGATGTTAGTCGAGAGCAATACTTGGGAGTTAGAGCCTAGTATGTTCTGTTGTGATTAGC---
-----ATCATTTTTATATCAAAGTTCAGGTACCATGCTAATCTACTTGGGAAATGTTATATGTGTCCAGTACTGGCTAGT
TACAAATATCTCACCACTCCGCAGTTTATCCGTATAGTACTTTACTTCATAATGTGTGCAAACACTAGCCAGTTGTTAGA
AAAGGCAGTCAACAGAACAAAGCTATCTCCTTGTGTCGTCAAATTGGATGACAGAATTATTTTAGTTGTGCTTTTCTATC
ATAGACCACAGTAACTTTCTGCCTTGTGTTATAGTCCTTGACA-TATAGACAGAAACTGAATG-CCTTTATTGTCAGGGT
TCCATCACCTTGTGGGGAAGTTGCTCCAAGGTGTACCAGCACGGTCAACAAATGTGGATGCAGCTTGCTATGTGAAGCTC
AAGAGGCGTCTGATCCTTTGGGCGATGTCCCCAAGAGTGCACGGAATGAAGAATCCGTGAAGAGTTCAGATAGTATCAAC
AAAGATGGCGCTGGGAACCCAAAAAACCTGCAGTAGCAGTGTTGATGATGCTCCAGTTTCGGAG-AAAGGTGATTCTGAA
TAATGTGTTCTACATACTCGCAA---------C-----------TCAGGGCTGCACTACTGTGCCTTGAAATACTC--AA
GTTTGCCTTATTATCTAGG-------------------------TATATG--TATGGAATAATTTCTCAAACAAGCCATG
GAACCCTCTGCCATCAACATGGCACAG----------------------------------------------------A
TGTGAAGTGTGTTTGGGACTTGGAACAGTTTGCTGTGTGGACATATATCTTGAACTATCACCATC----ATTCGATATGA
GACCATTTAATTCGAGTTGTTTTCCTAATG-TTTACAGTAGTGCGCATTGTCCAGCTTTAAGACACAGATCGTGGATGAT
GTTGCACAGAGCATAGGGAACTTTTGCTTGCTCCAAACAAGCTTGTTTGTGAACGTGTACCTGGTGCCATGTGCCAGTTA
CACCACACCTATTTCTACAATTACAGTAACGGTTATTCAGCACTTCTGTATATATTTTCTCATTGTTTGCGTCTGTCACG
CTCCTCTTGAAGCCCTCGGTGCAGGAGCCGGATCCTCTAACTTAGAGAAGGGAAGTCACGGTGCTACAGTGCTTGTCTAG
TGTAAAATGAAGAAGGAATGCTAGGGACTATTAGCAGGTTATTTACTTTTGGTAATTACTGTAGATATAAAATATCTAAA
ATTAATTTTATCTCACCATCAACTTGTTTGTATGTGATCAGTAATTTAAAAATTAATTTTAAGTTATTTTAGCCTCAATT
GTATGAATTAACAATAGAAAAGTTAGGATACTGTAGCTTCTCTAACATCCCTTGTGTATGTTAGAGGATCTAGCTCCGTC
GGTGCATAGGTTACATATATATACTGATCTGGTTTACTTGAGGGTGTTCTCCATCGTGTTGCTTGGTGGTGTCCCATGGT
CTTCTTCTGCTGCTTTGCTAATCACGGGATCTCAGCGTCCATGTGTTCTACAAATGTTTGTTTCTTGGCGAAAAGTCCAT
TCTGCACCCGAGCTCATATGCTC
>chr4A_1
CGGCGTGCAGCACCGGGACCACTGGCGTGCGGCTCCATGGCAACACCAAGCGCGGCAAGAAAACTTCAAT---GCACCGA
CGACGTCTCCGGTGAAGCTTCATTGCAGCTCCGGCAGCACTCCATTGCAGCCCCGGGCGGTGCTCCATTGCAACTCTAGC
ACGCGACAAAAAGCTCCAACGCAGCACCGGTGGCGAGCAGCTCAGCCTCCTCCTGCGTGCTGCGTTGCAGCATCGGCGCC
CGCCTCCGGCCTTTGCACTGCGTTGCAACACCGGCGGTGAGCAGCCCAGCCTCCTCCTGCGTGCTGCG-TGCATCACTGG
CGGCGAGCGGTGTCGCCCTCCTGCCTTCGTGCTGCGTTGCAACACCGGCTGTGAGGATCAACAGCTGGTGGTTGCGACGC
CCCTCATTCGCGGCACCAACAGCAACTAATTGTGCCGGGATGCAGCAGGCGGTGGTTGCCGTCATCCCTCCCGATTCGCA
GCAGTGGCGGCTGGTGGTCGGCGTTGCCATGGAAGCCCTCCCCTCTCGGATGTGAACAACGAGAGATGGGGAAAGGAAAG
AGACGAACGTGGAGAACGCGTGGAGGAGAGTGAAGGGATAAGGCTGAGGGGAAGCGGTGGACTAGCCCACAAGGGCACGT
GTCGAGCAGGGGACAAGGTTTACAAAATGAGAGATCAGTCGGTTGGAAATAAACGTTTTTCATATTTTTATCACTTGCTC
TGTTCACCATATACACGACTGACATGTGGGCTCACTTTTGTTGAGGTGTTTTTCTAAGAAAACTATTATAGAAATGAGGG
ACACAAGTGTCTTTTCATGTGCCAATTAATACCGTTTGCTGAAAATATGGAGGGTAGTGTTGGGAAGGAAATTCGGAACC
GATGTCAAATAGGGAAGAAAATAATTTTCAGATCAAATAGGAGAGACATGCCTAACCCCTTTTAACAAACTGCTTGGGCT
GAAGCATTCCACTCAACCACCCAGATCCAGATCTAGAGACCACCATGGCAGTAGAGTTGTTGACGCTCCCGGGTGAGCTC
TTCGAAGAGATCCTCCTCCGGCTTCCCCCCCGATGAGCCAGCCTGCCTCCTCCGTGCCTCCCTTGTTTGCAAGGCCTGGG
GTTGCACCGTCACCTGTCCCAGCCTCCGCCGTCGCCTCCACGAGCTCCATCGTACAACCCCCGTGCTTGGCTTCCTGCAC
GACCGTCGCGACAAGAGCATCTCAGACTTCATCCCCACCACAATATCGTCCTTCTCACTCACCGTTCCAGACCGCCGGTG
CTGGCGGGCCCTCAACTGCCGCCACGGTCGGGTCCTCTTTCTCTCTAACTCCAAGGGCCAAAACACCGAGGAATTTCTCC
TGTGGGAGCCAATCACGGGTGCCCAACAGCGCATACCGGCGCCCGTGGCTTACGACAACATAAGTGCGAACGTGATTGTG
TACCCACCTGCCGCCGTGTTCTGCACAGCGGACGGGTGCGACCACCACGACTGCCTGGGGGGCCCTTTCTGCGTGTTGTT
CATCTTCTCTGTCAACAACGTAGACACTGACGATGACACTGACGACGACGG---TGTCACGTGGGCAGGCATATACTCGT
CAGAAACTGGCACCTGGGGCGAGCTGACCTCATTGCACCCCTTCTG------GCCCATGTGCTTCACATTTTATTCCAGT
GTGCTTGTTGGGAGGTCTTTGCTCTACTTCATGTTTGATGATGGGTCCATCCTAGAGTATGACCTTGCACGGCACGGTCT
GGCTGTGGTTGATCCACCTGAGTCAGACTACAT---CGACCA---A---TGTAACATCATGCTGGCGGAGGACGGCGGAC
TAGGTGTTAATGAAGTTATGAATTTGCACCTCAAATTGTGGGCACGGGAGGCGAGTGATATCACTGATGCACGATGGGTG
CTGAGCCGAGTCATCTACCTCGGCAGTTTG---CTCCCAATTATTGCTTTTGTGGATGCAGAGACTAGAGTGCTAGTGTT
GGGCTTTGCCGAGGGAGCAAATGTCATCTTCGTGACCACGGTTGCTGGCGTCTTCATGATCAAACTACAATCAAATGAGG
TGAGAAAGGTGTG---------CGATGATCATGGCTTTCGTAATTTGATTCCAGTTGTCAGCTTCTACACTCCTATGCCT
CGAGTTGAGCACAAGGATCCGTCGTTGAAGCATAGTGAGGAGGCAGATGGTACCGACCAAGAAGGGGAGGAGGAGAAGAC
AGCAGATCATGCACAACAGTTGATTAACA--ATGGGTCCAATGTTAACAAGGAGGGGGACTTTGTCAACATCCTCGAATG
CGCTATCCATGCCACAGAGAACAGGTTAGTTCGGT----------------------GCTGAAGCATGCCAATGTATTCT
TTGTGTGGAAAATAAATTGCAAGTAGTTCAGTGCTC-TTTTGGGTCTGTAATTGTTC--TAACATGCCCCTTGTTGCTCT
AGGCCTTTGGCTTTTGTAGTTT-------------------GGTTTCAGATGTTCTATGGTAATGTGATTACTGAGCTAT
GAGTGTGTTGCTGTTTGAGATGTTACTCGAGAGCAATACTTGGGAGTTAGAGCCTAGTATGTTCTGTTGTGATTAGC---
-----ATCGTTTTTATATCAAAGTTCAGGTACCATGCTACTCTACTTGAGAAATGTTATATGTGTCCAGTACTGGCTAGT
TACAAATATCTCATCACTCTGCAGTTTATTCGTATAGTACTT-----CATAATGTGTGCAAGCACTAGCCAGTTGTTAGA
AAAGGCAGTCAACAGAACAAAGCTAGCACCTTGTGTCGTCAAATTGGTTGACAGAATTATTTTAGTTGTGCTTTTGTACC
GTAGATCACAGTAACTTTCTGCCTTGTGTTATACTCCTTGACA-TATAGATAGAAACTGAATGCCCTTTATTGTCAGGGT
TCCA---CCTTGTGGGGAAGTTGCTCCAAAGTGTACCGGCACGGTCAACAAATATGGATGCAGCTTGCTATGTGAAGCTC
AAGAGGCGTCTGATCCTTTGGGTGATGTCCCCAAGAGTGCGCGGAATGAAGAGTCCGCGAAGAGTTCAGATAGAATCCAC
AAAGATGGTGCTGGGAACTCAGAAAACCTGCAGTAGCAATGTCGATGATGCTCCAATTTCAGAG-AAAGGTGATTCTGAA
TAATGTGTTCTACATACTCGCGACTCAGGGCTGTAGTGGCGATGCCAGGGCCGCAGTACTGTGCGTTGAAATACTCTTAA
GTTTGCATTATTATCTAGG-------------------------CATATGTATATGGAATAATTTCTCAAACCAGTCGTG
GAACCCTCTGCCATCAACATGGCACAG----------------------------------------------------A
T-TGAAGTGTGTTTGGGACTTGGAACAGTTTGCTATGTGGACATATATCTTAAACTATCACCATCATTCATTCGATATGG
GACCATTTAATTCGAGTTGTTTTCCTAATATTTTACAGTACTGTGCATTGTTCAGCTTTACAACACAGATCGTAGATGAT
GTTGCACAAAGCATAGGGAACTTTTGCTTGCTCCAAGCAAGCTTGTTTGTGAACGTGTACCTGATGCCATGTGTCAGTTA
CACCACAACTTTTT------------------------------------------------------------------
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>chr4A_1021
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----------------------------------------------------------------GCTCCCGGACGTGCTC
GTAGAAGAGATCCTCCTCCGCC-TCCCGCCCGACGACCCGGCCTGCATCCTCCGCGCCTCGCTCGTCTGCAAGACCTGGA
GCGGCATCGTCTCCCACCCCGCCTTCCGCCGCCGCCTCCACGAGCTCCAAGGGGCAGCCCCCGTGCTCAGCTTCCTCCAC
AACTGGGACGACGAGCGCATCCCCCACTTCGTCCCCACCACAGACTCGTCCTTCTCCCTGGCCGCGCCGGACTGGCACTC
CTGGCGGGCCGTCGATTGCCGCCACGGCCTCGCCCTCTTCCTCTCCAAGGGCCACCG---GGGCACCAAGGAACTCATCG
TGTGGGAACCAATCACGGGCGTCCAGCAGCGCGTACCGGTGCCCGCTGCCGCGGCCTTCAAGAGCGACCAACCGACGACG
------------GCCGTGTTCTGCGCATCGAACGGATGCGACCACCGCGACTGCCTCGGGGGCCCTTTCCACGTGGTATT
CGTCTTTGGCTTCTTTTTTTTCT------ATGACGAAGATGACAAGGAGCAATATGACACATCGGCGTGCACATACTCGT
TGGAGAATGGCACCTGGGGCGAGCTGATCTCGATGCACGACGAGTTCGGCAACTTTGGAGG----------TTGTCCAGT
GTGCTCGTCGGGAGGTCTCTGCTTTACTTCATGTCAAATGGTGGGTTGATCCTGGAGTATGACTTGACCAGGGACAGCCT
GATTTGGATCGACACACCATGCGGCGCCTACACG---GAGCA---A---TTTAACCTCATGTTGGCGGAGGACGGTGGAC
TCGGAGTAAGTCAAGTCTTGGAACCCCATCTCAAATTGTGCTCATGGGAGGTGACTGATGGCACTCATGGACAATGGATA
CTTAGCCGGGATATCTACTTGGAAAATTTG---CTCCCAAATAGTGCTCTCAAGCGTTATGTGGG---------TGTGTT
GGGCTTTGCCGAGGGAGCAAATGTCATTTTCATGATCACGGTTGCTGGCCTCTTCACAATCGAACTACAGTCGGATCGCG
CGAGGAAGGTGTTTGATA---------ATCATGGCTTCTGTAATCTGATTCCAGTTGTCAGCTTTTACACTCC-------
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>chr7A_1022
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-----------------------------------------------------------------CTCCCGGACGAGCTC
GTAGGAGAGATCCTGCTCCGCA-TCCCGCCCGATGACCCCGCCAGCCTCCTCCGTGCCTCCCTCGTCTGTAAGTCCTGGA
GCGAGGCCGTCTCCCAACGCTGGTTCCGGCGTAGCTTCCACAATCTCCATCCGTCACCCACCGCGCTCGGGGTTCTCCAT
GACTGGCACGATGAGGCCATCCCTACCTTCATCCCGGCCACCGCATCGCCGCCCCCGACCGCTTTCTCTGGCA-------
------GGCCGTCGACTGCCGCCATGGCCGCGCCCTCTTCCTCTCTGAGGACCGT---------ACTGAGGAATTCCTGG
TGTGGGAGCCAATCACGGGTGCCCAGCAGCGCGTACCTATCCCCGTGGTGTTCCAGTTCGGCAACACCACCG------CA
------------GCCGTGTTCTGCGCAGCGGACGGGTGCAACCACCACGACTGCCACGGCGGTCCGTTCTGCGTGGTCTT
TGTCTTCTCCGTCTT------------------------TGATGAAGACGC---TGAGACGTCGGCATGTGTCTACTCAT
CTGAGACTGTCGCCTGGGGCGAGCCGACCTTAATGCACAACGAATTCATTG------TGGACTTCACATATTATTCCAGC
GTGCTTGTTGGGAGGTCTTTCTTGTACTTCATGACATGTGGTGGGTTTATCCTGGAATATGACCTGGCAAGGCATGGACT
GACTTGGTTCGACACACCAGACTCTTGCAACTCTAAGGGTGAACCCACTTGCAACCTCATGCTGGCGGAGGGCGGTGGAC
TAGGACTCGTCGAAGAACTGGATCCGCATCTGCAATTGTGGTCATGGGAGGTGATG---------GATGCCCGATGGGTG
CCTGGCCGAATCATCTACCTGGAAAGTTTGTCCCTAGTAAATGGTGCTCCAGTGGGTGCAAAATGTCCGGTGCATGTGTT
GGGCTTTGCCGAGGGAGCAAATGTCATATTCGTGACCACTGCTGCAGGCCTCTTCTCAATCCAAGTACAATCAGGGCAGG
CGACCAGGGTGTG----------GATGATCATGGATATGGTAAGCTGATTCCGATCGTCGGCCTTTACACTCCTATGCCC
CGAGGCGAGCAC--------------------------------------------------------------------
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>chr5D_1023
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------------------------------------------------------------------TCCTGGACGAGCTC
TTCGAAGAGATCCTCCTCCGCC-TCCCGCCCGACGACCCAGCCTGCCTCCTCCGCGCCTCCCTCGTCTGCAAGGCCTGGG
GTTGCGCCGTCTCCCGCCCCCACTTCCGCCGCCGCCTCCACGAGCTCCACCGGGCGCCCCCGGTGCTCGGCCTCCTGCAC
GACCTGGAAGACGAGCGCATCCCACGATTCATCCCCACCACCGCGTCGTCCTTCTCCCTCACCGCTCCGCACAACCGGTA
CTGGCGGACCCTCGACTGCCGCCACGGCCGCGCCCTCTTCCTCTCCAACCCCCAGTCCCCGGAAACCCAGGAGCTTCTCG
TGTGGGAGCCAATCACGGGTGCCCAGCAGCGCATACCGGTGCCCGCGGCGCTCGAGAGCAACTTCCCCATGG------CG
------------GCCGTGTTCTGCGCAGCGGACGGGTGCGACCACCGCGCCTGCCTCGGGGGCCCTTTCCGCGTGCTCTT
CATCCTCTCGGTCGTGGTAGGCCAAGT---------CACTGACGACGACTGCTATCTCACGTCGGCGTGCGCATATTCGT
CGGAGACTGGCACCTGGGGCGAGCCGACCTCGTTGCGCCGCCGCTCGCCCATGCCCATGTGCTTTACATTTTATTCCAGT
GTGCTCGTTGGAAAGTCTCTGCTCTATTTCATGTCTGATGATGCGTTCATTCTCGAGTGTGACTTGGCAAGGCACAGACT
GGCTGTGTTCAACCCACCAAACCATGAGCCGGTCTGCGGCCA---A---TATACCATCATGCTGGCGGAGGACGGTGGAC
TGGGAGTTTGCCAAAGGATGGATCAGCAGCTCAAATTGTGGTCAAGGGAGGTGAGTGACAGTGTTGAAGCACGATGGGTG
CTGAGCCGGGTCGTCTACCTGGAAAATTTG---CTCCCGGTTGGTGCTCTCGTGGATGCAGAGACTAGAGTGCAAGTGCT
GGGCTTTGCCGAGGGAGCAAATACCATTTTCCTAACCACGGTTGATGGCATCTTCATGATCAAACTGCAATCGGAGCGGG
CGAGGAGGGTGTGCGATGAATCCGATGATCATCTCTTTTGTTATTTGATTCCGGTTGTCAGCTTCTACACTCCTGTGCCT
CGAGGTGAGCACAGGGATCCGTCGTTGAAGCATAGTGAGGATGCAGGTGGT------------------GAGGAGAAAAC
AGTATATCAGGCACAACAATTGATCAACAAAATGAGTCAAATGTTACCA---GGGGGGACTTTGTCAACGCTTTCGATTG
CATCAACCACGCCATAGAGAACAGGTTAGGATTCTCTTCCCAAAAGCCGCTAGCCCCGCTGAAGTGTGCCAATGTGTTAT
TTGTGTGGAAACTAACTTGCAGTTAGTTTGTTGATTTTTTTGGATCTGTTATTGTTCTATAACATGTCCCTAGTCGCTCT
GAGCCTTTGGCTTTTGTATTTTGTAAGACAAGGATTAATGGGGTTCAAGATGTTCTAAGATGTCCCTAGTT----GCTAT
GAGTGTGTTGCTGTTTGAGATGTCACTCGTTAACAATACTTGGGAGTTAGAGCCTAGTATGTTCTATTATGATGTGCACG
TTGTGATCATCATCGTATCGAAGTGCGATTACCATGCTA-------------------------TCCAGTACTAGCTAGT
TCCAAATATCTC-----TCTGCAGTTTATTCATATTGTATACTTG------ATCTGTGCAGACACTAGTCAGTTGTTAGA
AAAGGCAGTCAACAGAACAAACTTAGCACCTTGTATCGTCAAATTGGTTGACAGGATAATTATAATTGTGCTGTCCTATC
ATAGATCACCGTAACTTTCTGCCTTCTGCTATAACCTTAACAATTGTAGACTGAAACTGTATG-CCTTTGTTGTCAGGGT
TCCA---CCCTATTATGAAGTTGCTCCTGAGTGTACCAGCATGGTTTACGGACATTGATGCAGCTTGCTATAG-------
-----------------------------------------------GAAGAATCCATGAAGACTTCAGC------CAGC
AAAGAAGATGCTAGGAACTCAAAAGACCTCAGGTAGCAATGTTAATGATGCTCCACCTTCAGAGAAAAGGTGATTCTGAA
TAATGTGTTGTATATACCACTGATCCTTTTGCC-----------CCAGAGGCCCAGACCTGTGTGGCTAAATACTC--AA
AATTTTCATTATTCTGTAAGTATATCTGTATATGTCTGAAATTCTATTTG--TATGAAATAGTTTCTCAAACAAGTAGTG
AAACCAACTTAACCCAATGCTGTTAACAACTTAACATGGCATGGATGCTGGCCCAAAGGGAATCATATTACACACGGACA
TGTGAAGTGTGTTTGGGACTTGGAACAGCTTG------------------------------------------------
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>chr5B_1441
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--------------------------------------------------------------------ACCG------CG
------------GCCGTGGTGTGCGCAGCGGACGGGTGCGACCACCAAGGCTGCCATGGGGGTCCTTTCTGCGTGCTCCT
CGTCTCCACTGCCTCCATCTTGT---CCGAGTACGGTCCATTCGACGACTT---TGTCACATCCGCGTGCCTCTACTCGT
CGGAGACTGGCGCGTGGGGTGAGCTGACCTCGATGCAGGACGAGTTCATG------ATGGACTTTACATATTTCTCCAGC
GTTCTTGTTGGGAGGTCGCTGCTCTACTTCCTCTCCTACCGTGGGCGGATCCTGGAGTACGATTTGGCCACTCATGGCTT
GGCTGTGTTGAGCACGCCGCCTCAAAGTATCTGCTGCTCTGAAGGA---TTTAACGTCATGCTGACGGAGGACGGTGGAC
TGGCGCTTATCGAAGCCTTGAGTCCGGATCTCAAATTGTGGGAAAGGGAGGCGAGTGAGGGCACAGATGCACAATGGGTA
CTGAGCCAGGTCATCTCCTTGGACTTTTTG---CTCCCTGCTATTG------TCGGTCCAAGAGATTCTGTGCTAGTGTT
GGGCTTTGCCGAGGGAGCAAACACTATTTTCGTGAACACTCTTCACAATCTATTCATGATCGATCTACAGTCGGAGCAGG
TGAAAAAGGTGTG---------TGATGGTCGTGGCTTCTGTAATTTGATTCCAGTTGTTAGCTTCTACACTCC-------
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>chr4A_1695
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----------------------------TCATGTCTGATGATGGATTCATTCTCGAGTGTGACTTGGCAAGGCATGGGCT
GACAGTGTTTGACCCACCAAACTATGAGCCAGTCTGTGACGGCCGA---TATACCATCATGCTGGCGGAGGACGGTGGAC
TGGGAGTTTGCCAAAGGATGAATCAGCAGCTCAAATTGTGGTCAAGGGAGGTGAGTGACAGTGCTGATGCACGATGGGTG
CTGCGCCGGCTCGTCTACCTGGAAAATTTG---CTCCCGGTTGGTGCTCTCCTGGATGCAGAGACTAGAGTGCAAGTGCT
GGGCTTTGCCGAGGGAGCAAATGCCATTTTCCTGACCACTG--------------------------CAATCAGAGCGGG
CGAGGAGGGTGTGCGATGAATCCGGTGATCATCTCTTTTGTTATTTGATTCCAGTTGTCAGCTTCTACACTCCTGTGCCT
CGTGGTGAGCACAGGGGTCTGTCGTTGAAGCATAGTGAGGATGCAGGTGGT------------------GAGGAGCTTCT
ACACTCCTG-----------------------TGCCTCAAATGTTACCA---AGGGGGACTTCGTCAACGCCTTCGAATG
CATCAACCACGCCATAGAGAACAGGTTAGGGTTCTCTTCCCAAAAGCCGCTAGCCCCGCTGAAGTGTGCCAATGTGTTAT
T---------------------------------------------TGTTATTGTTCTATAACATGTCCCTAGTCGCTCT
GAGCCTTTGGCTGTTGTATTTTGTAAGACAAGGATTAGTGGGGTTCAAGATGTTCTAAGATGTCCCTAGTT----ACTAT
GAGTTTCTTGCTGTTTGAGATGTCACTCGTTAACAATATTTGGGAGTTAGAGCCTAGTATGTTCTATTATGATGTGCACG
TTGTGATTGTCATCGTATCAAAGTGTGACTACCATGCTA-------------------------TCCAATATTAGCTAGT
TCCAAATATCTCATCACTCTGCAGTTTATTCGTATTGTACTT-----CATAATCTGTGCAGACACTAGCCAGTTGTTAGA
AAAGGCAGTCAACAGAACAAACTTAGCACCTTGTATCGTCAAATTGGTT------ATAATTATAGTTGTGCTGTCCTATC
ATAGATCGCAGTAACTTTCTGCCTTACGTTATAACCTTAACAATTATAGACTGAAATTGTATG-CCTTCATTGTCAGGGT
TCCA---CCCTATGGTGAAGTTGCTCCTGCGTGTACCAGCACGGTTTACGGACATGGATGCGGCTTGCTATATGAAG---
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>SNPs
--------------------------------------S------------------------------SSSS-------
------------SS------------------S-----S---S---------S-S-SS-S--------------------
------S--S-------------------------------S-------------------------------S------
-------------S----------------------------------------------------S-S-----------
---------------------------------------------------------S--------------------S-
---------------------S------------------S-----------------S----S----------------
--S----S------------------------------------------------S---S-------------------
--------SS---------------S------------------------------------------------------
---------S--S-S--------S-S-------------S-------------------S--------------------
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-----------------S-------S---------S--------------------------------------S-----
S-------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
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-----------------------------------S-------------------------S------------------
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----------------------------------------------------S------------------S--------
--------------------------------------------------------------S-----------------
---------------------------------------------S----------------------------------
-------------------------------------S--------------------------------------S---
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-----------------------------------------------------------------S--------------
-----------------S--------------------------------------------------------------
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----------------------------------------------------------------------------S---
-----------------------------------------------------S--------------------------
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-----------------------------------------------------------------S--------S-----
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-------------------------S-----------------------------------------------S------
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-------------------------S------------------------------------------------------
---------------------------------------S--------S-------------------------------
-------------S-----S---------S-------------SSSS---------------------------------
-------------------------S-S-------------------S--------------------------------
-----S---------------------------S----------------------------------------------
----SSS----------------------S-----------------------S--------------------------
----------------------S-----------------S--------------------------------S------
--------S---------S-------------------S----------------S----S-------------------
---------------------S----------------------S------S---S--------S---------------
---------------------------------------------------------------------------S-S--
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----------------------------------S----------------S---------------------------S
-----------------------------S----------S--S-------S--------SS-----------S------
--------S---------------------------S--------------------------S---------S------
-------S--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS
>forward_666
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------CAGAGGGCGAGGTTTACGAC------------------------------------------------------
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>reverse_2734
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-------------CCACTCCGCAGTTTATCCGT-----------------------------------------------
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>forward_2306
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----------------------------------------------ACAAGGAGGGGGACTTTGTT--------------
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>reverse_4070
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---------------------------------------------------------------------CTAGCTCCGTC
GGTGCATAG-----------------------------------------------------------------------
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-----------------------
