Multiple sequence alignment - TraesCS5B01G501800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G501800 chr5B 100.000 2831 0 0 1 2831 669234053 669231223 0.000000e+00 5228
1 TraesCS5B01G501800 chr5D 89.032 2024 85 46 769 2729 530055256 530053307 0.000000e+00 2381
2 TraesCS5B01G501800 chr5D 86.920 237 24 7 251 485 530055911 530055680 2.800000e-65 259
3 TraesCS5B01G501800 chr5D 83.700 227 18 4 1 212 530056127 530055905 2.220000e-46 196
4 TraesCS5B01G501800 chr5A 86.575 2041 125 61 727 2729 657779239 657777310 0.000000e+00 2113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G501800 chr5B 669231223 669234053 2830 True 5228.000000 5228 100.000000 1 2831 1 chr5B.!!$R1 2830
1 TraesCS5B01G501800 chr5D 530053307 530056127 2820 True 945.333333 2381 86.550667 1 2729 3 chr5D.!!$R1 2728
2 TraesCS5B01G501800 chr5A 657777310 657779239 1929 True 2113.000000 2113 86.575000 727 2729 1 chr5A.!!$R1 2002

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
611 628 0.033208 GGGCCCACATCTCCATTTCA 60.033 55.0 19.95 0.0 0.0 2.69 F
677 694 0.591170 AACTTTGGACGTGCGGATTG 59.409 50.0 1.60 0.0 0.0 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1567 1857 0.239347 AGTAGTCACACCGCGTGTAC 59.761 55.0 4.92 5.02 45.65 2.90 R
2528 2851 0.247185 CCCACGGAAATGCTTGCATT 59.753 50.0 14.27 14.27 0.00 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 9.498307 CAGTTAACGGTATTTCACATAATTTCC 57.502 33.333 0.00 0.00 0.00 3.13
73 74 9.457436 AGTTAACGGTATTTCACATAATTTCCT 57.543 29.630 0.00 0.00 0.00 3.36
83 84 4.412199 TCACATAATTTCCTGAGGGTAGGG 59.588 45.833 0.00 0.00 38.42 3.53
84 85 4.166144 CACATAATTTCCTGAGGGTAGGGT 59.834 45.833 0.00 0.00 38.42 4.34
108 109 4.187020 CCCCCTGGGCCCTAGCTA 62.187 72.222 25.70 0.00 35.35 3.32
109 110 2.527875 CCCCTGGGCCCTAGCTAG 60.528 72.222 25.70 14.20 39.73 3.42
126 127 0.909610 TAGTGAAGCTCCACCCCTGG 60.910 60.000 0.00 0.00 37.76 4.45
127 128 2.935481 TGAAGCTCCACCCCTGGG 60.935 66.667 5.50 5.50 38.25 4.45
155 161 1.941377 TGAATTCCCAGCCAAGCATT 58.059 45.000 2.27 0.00 0.00 3.56
179 195 2.290260 TGCTATACCCATGTAGCCATGC 60.290 50.000 9.78 0.00 45.90 4.06
195 211 2.424601 CCATGCGATTGTTCTCCAATGT 59.575 45.455 0.00 0.00 43.87 2.71
223 239 2.656049 CCAACCATGGCATGTGACA 58.344 52.632 24.80 0.00 40.58 3.58
224 240 0.967662 CCAACCATGGCATGTGACAA 59.032 50.000 24.80 0.00 40.58 3.18
225 241 1.551430 CCAACCATGGCATGTGACAAT 59.449 47.619 24.80 2.85 40.58 2.71
226 242 2.027929 CCAACCATGGCATGTGACAATT 60.028 45.455 24.80 7.45 40.58 2.32
227 243 3.557475 CCAACCATGGCATGTGACAATTT 60.557 43.478 24.80 5.16 40.58 1.82
228 244 4.066490 CAACCATGGCATGTGACAATTTT 58.934 39.130 24.80 4.54 36.16 1.82
229 245 4.354893 ACCATGGCATGTGACAATTTTT 57.645 36.364 24.80 0.00 36.16 1.94
230 246 5.480642 ACCATGGCATGTGACAATTTTTA 57.519 34.783 24.80 0.00 36.16 1.52
231 247 6.052405 ACCATGGCATGTGACAATTTTTAT 57.948 33.333 24.80 0.00 36.16 1.40
232 248 6.474630 ACCATGGCATGTGACAATTTTTATT 58.525 32.000 24.80 0.00 36.16 1.40
233 249 6.941436 ACCATGGCATGTGACAATTTTTATTT 59.059 30.769 24.80 0.00 36.16 1.40
234 250 7.447853 ACCATGGCATGTGACAATTTTTATTTT 59.552 29.630 24.80 0.00 36.16 1.82
235 251 8.298140 CCATGGCATGTGACAATTTTTATTTTT 58.702 29.630 24.80 0.00 36.16 1.94
236 252 9.119329 CATGGCATGTGACAATTTTTATTTTTG 57.881 29.630 19.32 0.00 36.16 2.44
237 253 7.137426 TGGCATGTGACAATTTTTATTTTTGC 58.863 30.769 0.00 0.00 0.00 3.68
238 254 6.581919 GGCATGTGACAATTTTTATTTTTGCC 59.418 34.615 3.14 3.14 36.91 4.52
239 255 6.581919 GCATGTGACAATTTTTATTTTTGCCC 59.418 34.615 0.00 0.00 0.00 5.36
240 256 7.646314 CATGTGACAATTTTTATTTTTGCCCA 58.354 30.769 0.00 0.00 0.00 5.36
241 257 7.814264 TGTGACAATTTTTATTTTTGCCCAT 57.186 28.000 0.00 0.00 0.00 4.00
242 258 8.908786 TGTGACAATTTTTATTTTTGCCCATA 57.091 26.923 0.00 0.00 0.00 2.74
243 259 9.342308 TGTGACAATTTTTATTTTTGCCCATAA 57.658 25.926 0.00 0.00 0.00 1.90
244 260 9.605955 GTGACAATTTTTATTTTTGCCCATAAC 57.394 29.630 0.00 0.00 0.00 1.89
245 261 9.566432 TGACAATTTTTATTTTTGCCCATAACT 57.434 25.926 0.00 0.00 0.00 2.24
247 263 8.716909 ACAATTTTTATTTTTGCCCATAACTCG 58.283 29.630 0.00 0.00 0.00 4.18
248 264 8.930760 CAATTTTTATTTTTGCCCATAACTCGA 58.069 29.630 0.00 0.00 0.00 4.04
249 265 9.495572 AATTTTTATTTTTGCCCATAACTCGAA 57.504 25.926 0.00 0.00 0.00 3.71
250 266 7.876896 TTTTATTTTTGCCCATAACTCGAAC 57.123 32.000 0.00 0.00 0.00 3.95
258 274 2.159000 CCCATAACTCGAACCTACCACC 60.159 54.545 0.00 0.00 0.00 4.61
259 275 2.480759 CCATAACTCGAACCTACCACCG 60.481 54.545 0.00 0.00 0.00 4.94
267 283 2.925563 CGAACCTACCACCGACATTTAC 59.074 50.000 0.00 0.00 0.00 2.01
287 303 8.804743 CATTTACTATGCTCAAATTTGCTCTTG 58.195 33.333 13.54 4.69 0.00 3.02
316 332 6.485171 AGTATCCTTGTAGAAATGCCTTTGT 58.515 36.000 0.00 0.00 0.00 2.83
322 338 4.930963 TGTAGAAATGCCTTTGTGTGTTG 58.069 39.130 0.00 0.00 0.00 3.33
326 342 4.869861 AGAAATGCCTTTGTGTGTTGTTTC 59.130 37.500 0.00 0.00 0.00 2.78
327 343 4.470334 AATGCCTTTGTGTGTTGTTTCT 57.530 36.364 0.00 0.00 0.00 2.52
341 357 5.471116 GTGTTGTTTCTATCCGGTTAAAGGT 59.529 40.000 0.00 0.00 0.00 3.50
348 364 6.806388 TCTATCCGGTTAAAGGTTTTTGAC 57.194 37.500 0.00 0.00 33.38 3.18
366 382 8.394121 GTTTTTGACCATCTATGAGACATTCTC 58.606 37.037 0.00 0.00 43.65 2.87
370 386 5.462240 ACCATCTATGAGACATTCTCTGGA 58.538 41.667 12.84 5.90 43.73 3.86
371 387 6.083383 ACCATCTATGAGACATTCTCTGGAT 58.917 40.000 12.84 7.45 43.73 3.41
373 389 6.014413 CCATCTATGAGACATTCTCTGGATGT 60.014 42.308 19.49 5.95 43.73 3.06
374 390 7.443477 CATCTATGAGACATTCTCTGGATGTT 58.557 38.462 16.36 0.00 43.73 2.71
396 412 3.492102 TTTACCCCTCTCTGCATATGC 57.508 47.619 21.09 21.09 42.50 3.14
408 424 3.878699 TCTGCATATGCCACTTACATGTG 59.121 43.478 24.54 0.00 41.18 3.21
409 425 3.878699 CTGCATATGCCACTTACATGTGA 59.121 43.478 24.54 0.00 38.49 3.58
410 426 3.878699 TGCATATGCCACTTACATGTGAG 59.121 43.478 24.54 15.61 38.49 3.51
411 427 3.304257 GCATATGCCACTTACATGTGAGC 60.304 47.826 17.26 5.54 38.49 4.26
412 428 2.795231 ATGCCACTTACATGTGAGCT 57.205 45.000 16.98 2.64 40.12 4.09
413 429 2.099141 TGCCACTTACATGTGAGCTC 57.901 50.000 16.98 6.82 40.12 4.09
414 430 1.339055 TGCCACTTACATGTGAGCTCC 60.339 52.381 16.98 3.09 40.12 4.70
415 431 2.014068 GCCACTTACATGTGAGCTCCC 61.014 57.143 16.98 0.00 40.12 4.30
416 432 1.278985 CCACTTACATGTGAGCTCCCA 59.721 52.381 16.98 6.24 40.12 4.37
417 433 2.625737 CACTTACATGTGAGCTCCCAG 58.374 52.381 16.98 2.81 40.12 4.45
418 434 2.234661 CACTTACATGTGAGCTCCCAGA 59.765 50.000 16.98 0.00 40.12 3.86
419 435 2.906389 ACTTACATGTGAGCTCCCAGAA 59.094 45.455 16.98 1.25 0.00 3.02
420 436 3.327757 ACTTACATGTGAGCTCCCAGAAA 59.672 43.478 16.98 1.14 0.00 2.52
421 437 2.957402 ACATGTGAGCTCCCAGAAAA 57.043 45.000 12.15 0.00 0.00 2.29
422 438 3.228188 ACATGTGAGCTCCCAGAAAAA 57.772 42.857 12.15 0.00 0.00 1.94
423 439 3.771216 ACATGTGAGCTCCCAGAAAAAT 58.229 40.909 12.15 0.00 0.00 1.82
424 440 3.508793 ACATGTGAGCTCCCAGAAAAATG 59.491 43.478 12.15 4.71 0.00 2.32
425 441 3.507162 TGTGAGCTCCCAGAAAAATGA 57.493 42.857 12.15 0.00 0.00 2.57
426 442 3.831323 TGTGAGCTCCCAGAAAAATGAA 58.169 40.909 12.15 0.00 0.00 2.57
427 443 4.214310 TGTGAGCTCCCAGAAAAATGAAA 58.786 39.130 12.15 0.00 0.00 2.69
428 444 4.648762 TGTGAGCTCCCAGAAAAATGAAAA 59.351 37.500 12.15 0.00 0.00 2.29
429 445 5.221303 TGTGAGCTCCCAGAAAAATGAAAAG 60.221 40.000 12.15 0.00 0.00 2.27
430 446 4.281688 TGAGCTCCCAGAAAAATGAAAAGG 59.718 41.667 12.15 0.00 0.00 3.11
431 447 4.482990 AGCTCCCAGAAAAATGAAAAGGA 58.517 39.130 0.00 0.00 0.00 3.36
432 448 5.089434 AGCTCCCAGAAAAATGAAAAGGAT 58.911 37.500 0.00 0.00 0.00 3.24
433 449 5.545335 AGCTCCCAGAAAAATGAAAAGGATT 59.455 36.000 0.00 0.00 0.00 3.01
434 450 6.725834 AGCTCCCAGAAAAATGAAAAGGATTA 59.274 34.615 0.00 0.00 0.00 1.75
435 451 7.235399 AGCTCCCAGAAAAATGAAAAGGATTAA 59.765 33.333 0.00 0.00 0.00 1.40
436 452 7.877612 GCTCCCAGAAAAATGAAAAGGATTAAA 59.122 33.333 0.00 0.00 0.00 1.52
437 453 9.777297 CTCCCAGAAAAATGAAAAGGATTAAAA 57.223 29.630 0.00 0.00 0.00 1.52
446 462 8.899887 AATGAAAAGGATTAAAATCTCTCCCA 57.100 30.769 2.91 0.00 35.73 4.37
447 463 8.899887 ATGAAAAGGATTAAAATCTCTCCCAA 57.100 30.769 2.91 0.00 35.73 4.12
448 464 8.122472 TGAAAAGGATTAAAATCTCTCCCAAC 57.878 34.615 2.91 0.00 35.73 3.77
449 465 7.178451 TGAAAAGGATTAAAATCTCTCCCAACC 59.822 37.037 2.91 0.00 35.73 3.77
450 466 5.130705 AGGATTAAAATCTCTCCCAACCC 57.869 43.478 2.91 0.00 35.73 4.11
451 467 3.883489 GGATTAAAATCTCTCCCAACCCG 59.117 47.826 2.91 0.00 35.73 5.28
452 468 2.413310 TAAAATCTCTCCCAACCCGC 57.587 50.000 0.00 0.00 0.00 6.13
453 469 0.698818 AAAATCTCTCCCAACCCGCT 59.301 50.000 0.00 0.00 0.00 5.52
454 470 0.253327 AAATCTCTCCCAACCCGCTC 59.747 55.000 0.00 0.00 0.00 5.03
455 471 0.618968 AATCTCTCCCAACCCGCTCT 60.619 55.000 0.00 0.00 0.00 4.09
456 472 1.045911 ATCTCTCCCAACCCGCTCTC 61.046 60.000 0.00 0.00 0.00 3.20
457 473 1.684049 CTCTCCCAACCCGCTCTCT 60.684 63.158 0.00 0.00 0.00 3.10
458 474 1.671901 CTCTCCCAACCCGCTCTCTC 61.672 65.000 0.00 0.00 0.00 3.20
459 475 1.684049 CTCCCAACCCGCTCTCTCT 60.684 63.158 0.00 0.00 0.00 3.10
460 476 1.671901 CTCCCAACCCGCTCTCTCTC 61.672 65.000 0.00 0.00 0.00 3.20
461 477 1.684049 CCCAACCCGCTCTCTCTCT 60.684 63.158 0.00 0.00 0.00 3.10
462 478 1.671901 CCCAACCCGCTCTCTCTCTC 61.672 65.000 0.00 0.00 0.00 3.20
463 479 0.682855 CCAACCCGCTCTCTCTCTCT 60.683 60.000 0.00 0.00 0.00 3.10
464 480 0.738389 CAACCCGCTCTCTCTCTCTC 59.262 60.000 0.00 0.00 0.00 3.20
465 481 0.623723 AACCCGCTCTCTCTCTCTCT 59.376 55.000 0.00 0.00 0.00 3.10
466 482 0.180406 ACCCGCTCTCTCTCTCTCTC 59.820 60.000 0.00 0.00 0.00 3.20
467 483 0.469917 CCCGCTCTCTCTCTCTCTCT 59.530 60.000 0.00 0.00 0.00 3.10
468 484 1.541233 CCCGCTCTCTCTCTCTCTCTC 60.541 61.905 0.00 0.00 0.00 3.20
469 485 1.138859 CCGCTCTCTCTCTCTCTCTCA 59.861 57.143 0.00 0.00 0.00 3.27
470 486 2.205074 CGCTCTCTCTCTCTCTCTCAC 58.795 57.143 0.00 0.00 0.00 3.51
471 487 2.159043 CGCTCTCTCTCTCTCTCTCACT 60.159 54.545 0.00 0.00 0.00 3.41
472 488 3.679917 CGCTCTCTCTCTCTCTCTCACTT 60.680 52.174 0.00 0.00 0.00 3.16
473 489 4.441495 CGCTCTCTCTCTCTCTCTCACTTA 60.441 50.000 0.00 0.00 0.00 2.24
474 490 4.811557 GCTCTCTCTCTCTCTCTCACTTAC 59.188 50.000 0.00 0.00 0.00 2.34
475 491 5.626809 GCTCTCTCTCTCTCTCTCACTTACA 60.627 48.000 0.00 0.00 0.00 2.41
476 492 6.560003 TCTCTCTCTCTCTCTCACTTACAT 57.440 41.667 0.00 0.00 0.00 2.29
477 493 6.348498 TCTCTCTCTCTCTCTCACTTACATG 58.652 44.000 0.00 0.00 0.00 3.21
478 494 6.061022 TCTCTCTCTCTCTCACTTACATGT 57.939 41.667 2.69 2.69 0.00 3.21
479 495 5.879777 TCTCTCTCTCTCTCACTTACATGTG 59.120 44.000 9.11 0.00 39.15 3.21
480 496 4.946772 TCTCTCTCTCTCACTTACATGTGG 59.053 45.833 9.11 3.79 38.40 4.17
483 499 1.555075 TCTCTCACTTACATGTGGGGC 59.445 52.381 9.11 0.00 38.84 5.80
532 549 4.364686 TCCCAACCCCCTCTCCCC 62.365 72.222 0.00 0.00 0.00 4.81
538 555 4.548513 CCCCCTCTCCCCCTCTCG 62.549 77.778 0.00 0.00 0.00 4.04
545 562 0.683504 TCTCCCCCTCTCGCTTACAC 60.684 60.000 0.00 0.00 0.00 2.90
551 568 1.805945 CTCTCGCTTACACGTGGGC 60.806 63.158 21.57 18.59 0.00 5.36
555 572 2.045340 GCTTACACGTGGGCCCAT 60.045 61.111 31.45 15.31 0.00 4.00
569 586 1.538687 GCCCATGTCAAAGCTTGCCT 61.539 55.000 0.00 0.00 0.00 4.75
580 597 3.492102 AAGCTTGCCTAGTCAACAAGA 57.508 42.857 0.00 0.00 42.71 3.02
581 598 3.492102 AGCTTGCCTAGTCAACAAGAA 57.508 42.857 13.26 0.00 42.71 2.52
584 601 3.058639 GCTTGCCTAGTCAACAAGAACAG 60.059 47.826 13.26 0.00 42.71 3.16
586 603 2.438021 TGCCTAGTCAACAAGAACAGGT 59.562 45.455 0.00 0.00 0.00 4.00
599 616 2.283173 CAGGTCAAAGGGGCCCAC 60.283 66.667 27.72 14.27 0.00 4.61
602 619 1.682344 GGTCAAAGGGGCCCACATC 60.682 63.158 27.72 5.74 0.00 3.06
609 626 1.224003 AGGGGCCCACATCTCCATTT 61.224 55.000 27.72 0.00 0.00 2.32
610 627 0.756815 GGGGCCCACATCTCCATTTC 60.757 60.000 26.86 0.00 0.00 2.17
611 628 0.033208 GGGCCCACATCTCCATTTCA 60.033 55.000 19.95 0.00 0.00 2.69
612 629 1.106285 GGCCCACATCTCCATTTCAC 58.894 55.000 0.00 0.00 0.00 3.18
653 670 5.094429 TGTTCATGATTCAGTCGTGTTTG 57.906 39.130 0.00 0.00 43.12 2.93
655 672 5.469760 TGTTCATGATTCAGTCGTGTTTGAT 59.530 36.000 0.00 0.00 43.12 2.57
656 673 6.017192 TGTTCATGATTCAGTCGTGTTTGATT 60.017 34.615 0.00 0.00 43.12 2.57
657 674 5.930405 TCATGATTCAGTCGTGTTTGATTG 58.070 37.500 0.00 0.00 43.12 2.67
667 684 4.733405 GTCGTGTTTGATTGAACTTTGGAC 59.267 41.667 0.00 0.00 0.00 4.02
671 688 3.347958 TTGATTGAACTTTGGACGTGC 57.652 42.857 0.00 0.00 0.00 5.34
677 694 0.591170 AACTTTGGACGTGCGGATTG 59.409 50.000 1.60 0.00 0.00 2.67
690 707 2.495270 TGCGGATTGGTTTGTATTGCAT 59.505 40.909 0.00 0.00 0.00 3.96
691 708 3.056250 TGCGGATTGGTTTGTATTGCATT 60.056 39.130 0.00 0.00 0.00 3.56
706 723 7.492524 TGTATTGCATTTATATTCCCGCAAAA 58.507 30.769 0.00 0.00 42.08 2.44
736 815 4.701361 CATGCATATACGTCGTCATTTGG 58.299 43.478 0.00 0.00 0.00 3.28
737 816 2.542178 TGCATATACGTCGTCATTTGGC 59.458 45.455 0.00 0.34 0.00 4.52
751 830 4.692155 GTCATTTGGCTTGGGATCTTTTTG 59.308 41.667 0.00 0.00 0.00 2.44
753 832 3.749665 TTGGCTTGGGATCTTTTTGTG 57.250 42.857 0.00 0.00 0.00 3.33
754 833 2.956132 TGGCTTGGGATCTTTTTGTGA 58.044 42.857 0.00 0.00 0.00 3.58
755 834 2.627699 TGGCTTGGGATCTTTTTGTGAC 59.372 45.455 0.00 0.00 0.00 3.67
756 835 2.893489 GGCTTGGGATCTTTTTGTGACT 59.107 45.455 0.00 0.00 0.00 3.41
757 836 3.321968 GGCTTGGGATCTTTTTGTGACTT 59.678 43.478 0.00 0.00 0.00 3.01
759 838 5.359756 GCTTGGGATCTTTTTGTGACTTTT 58.640 37.500 0.00 0.00 0.00 2.27
760 839 5.817296 GCTTGGGATCTTTTTGTGACTTTTT 59.183 36.000 0.00 0.00 0.00 1.94
800 1031 2.125106 GCTGGCCCTACAACCGAG 60.125 66.667 0.00 0.00 0.00 4.63
802 1033 1.218316 CTGGCCCTACAACCGAGTC 59.782 63.158 0.00 0.00 0.00 3.36
809 1040 1.390565 CTACAACCGAGTCGATCCCT 58.609 55.000 15.64 0.00 0.00 4.20
810 1041 1.065701 CTACAACCGAGTCGATCCCTG 59.934 57.143 15.64 5.98 0.00 4.45
811 1042 1.519455 CAACCGAGTCGATCCCTGC 60.519 63.158 15.64 0.00 0.00 4.85
812 1043 2.722201 AACCGAGTCGATCCCTGCC 61.722 63.158 15.64 0.00 0.00 4.85
816 1047 1.439644 GAGTCGATCCCTGCCACTC 59.560 63.158 0.00 0.00 0.00 3.51
950 1222 4.008933 CCATCCCCTCCCGATCGC 62.009 72.222 10.32 0.00 0.00 4.58
1033 1307 3.627395 TCAACAGTCCCACCATACATC 57.373 47.619 0.00 0.00 0.00 3.06
1037 1311 3.664320 ACAGTCCCACCATACATCCATA 58.336 45.455 0.00 0.00 0.00 2.74
1038 1312 4.242811 ACAGTCCCACCATACATCCATAT 58.757 43.478 0.00 0.00 0.00 1.78
1039 1313 4.287067 ACAGTCCCACCATACATCCATATC 59.713 45.833 0.00 0.00 0.00 1.63
1040 1314 4.533707 CAGTCCCACCATACATCCATATCT 59.466 45.833 0.00 0.00 0.00 1.98
1041 1315 5.721480 CAGTCCCACCATACATCCATATCTA 59.279 44.000 0.00 0.00 0.00 1.98
1070 1344 2.231215 AGAATCGCCGAGAAATCCAG 57.769 50.000 0.00 0.00 0.00 3.86
1083 1364 1.127343 AATCCAGGAGAGCCAGTAGC 58.873 55.000 0.00 0.00 44.25 3.58
1591 1881 0.782384 CGCGGTGTGACTACTCAAAC 59.218 55.000 0.00 0.00 34.18 2.93
1723 2014 5.116084 TGCTTTGCTAAGATCCCAATACT 57.884 39.130 12.29 0.00 32.92 2.12
1738 2029 8.924511 ATCCCAATACTGACAACCTTTATATG 57.075 34.615 0.00 0.00 0.00 1.78
1740 2031 8.994500 TCCCAATACTGACAACCTTTATATGTA 58.006 33.333 0.00 0.00 0.00 2.29
1741 2032 9.052759 CCCAATACTGACAACCTTTATATGTAC 57.947 37.037 0.00 0.00 0.00 2.90
1742 2033 9.052759 CCAATACTGACAACCTTTATATGTACC 57.947 37.037 0.00 0.00 0.00 3.34
1743 2034 9.052759 CAATACTGACAACCTTTATATGTACCC 57.947 37.037 0.00 0.00 0.00 3.69
1744 2035 6.630203 ACTGACAACCTTTATATGTACCCA 57.370 37.500 0.00 0.00 0.00 4.51
1745 2036 7.208064 ACTGACAACCTTTATATGTACCCAT 57.792 36.000 0.00 0.00 34.97 4.00
1746 2037 7.054124 ACTGACAACCTTTATATGTACCCATG 58.946 38.462 0.00 0.00 32.29 3.66
1748 2039 7.051623 TGACAACCTTTATATGTACCCATGTC 58.948 38.462 0.00 0.00 34.44 3.06
1750 2041 5.223449 ACCTTTATATGTACCCATGTCCG 57.777 43.478 0.00 0.00 32.29 4.79
1753 2067 6.161381 CCTTTATATGTACCCATGTCCGTAC 58.839 44.000 7.63 7.63 36.26 3.67
1763 2077 7.889600 TGTACCCATGTCCGTACATATATCTAA 59.110 37.037 11.55 0.00 44.70 2.10
1810 2124 9.683069 GGCTGTGATATTCCAATTTATTTACAG 57.317 33.333 0.00 0.00 32.39 2.74
1829 2144 8.912787 TTTACAGCGATTAACAAACTGAAAAA 57.087 26.923 0.00 0.00 32.67 1.94
1866 2181 0.398318 AGGAAGCTCTTGGGTCACAC 59.602 55.000 0.00 0.00 0.00 3.82
1872 2187 2.021723 GCTCTTGGGTCACACCAACAA 61.022 52.381 0.00 0.00 45.19 2.83
1882 2197 3.099905 TCACACCAACAACAAATTCCCA 58.900 40.909 0.00 0.00 0.00 4.37
1901 2216 3.260380 CCCAGTGTTGAAATGGCCAAATA 59.740 43.478 10.96 0.00 32.46 1.40
1958 2277 4.754114 ACTTCTTGAGCAGAGATCAACAAC 59.246 41.667 0.00 0.00 32.88 3.32
1981 2300 2.763448 GGATAGAGTCTGTGGCAAGTCT 59.237 50.000 1.86 0.00 0.00 3.24
2098 2417 2.248248 AGGTCAAACGGACTCTGATCA 58.752 47.619 0.00 0.00 46.16 2.92
2112 2431 7.335673 CGGACTCTGATCATATATCTGTACAGT 59.664 40.741 21.99 12.12 0.00 3.55
2113 2432 9.019656 GGACTCTGATCATATATCTGTACAGTT 57.980 37.037 21.99 16.36 0.00 3.16
2114 2433 9.838975 GACTCTGATCATATATCTGTACAGTTG 57.161 37.037 21.99 12.70 0.00 3.16
2115 2434 9.579932 ACTCTGATCATATATCTGTACAGTTGA 57.420 33.333 21.99 16.73 0.00 3.18
2166 2486 0.165944 GTGTTACAGTCACGCCATGC 59.834 55.000 0.00 0.00 0.00 4.06
2167 2487 0.250081 TGTTACAGTCACGCCATGCA 60.250 50.000 0.00 0.00 0.00 3.96
2173 2493 0.806868 AGTCACGCCATGCAAATGAG 59.193 50.000 0.00 0.00 0.00 2.90
2218 2538 1.581934 TTGCGAAGAATATCCCAGCG 58.418 50.000 0.00 0.00 0.00 5.18
2237 2557 2.666619 GCGAAAAGACCTGCAGATGTTG 60.667 50.000 17.39 0.00 0.00 3.33
2252 2572 5.807520 GCAGATGTTGAGATCGAGTAGAAAA 59.192 40.000 0.00 0.00 0.00 2.29
2253 2573 6.237701 GCAGATGTTGAGATCGAGTAGAAAAC 60.238 42.308 0.00 0.00 0.00 2.43
2254 2574 6.254589 CAGATGTTGAGATCGAGTAGAAAACC 59.745 42.308 0.00 0.00 0.00 3.27
2266 2586 7.210174 TCGAGTAGAAAACCATATCAATCAGG 58.790 38.462 0.00 0.00 0.00 3.86
2296 2616 0.874607 GGGTAGCGAGGTAACATGCG 60.875 60.000 0.00 0.00 42.99 4.73
2297 2617 0.874607 GGTAGCGAGGTAACATGCGG 60.875 60.000 0.00 0.00 42.99 5.69
2432 2752 5.284861 TGTTTAGTGAGCCAACAAGACTA 57.715 39.130 0.00 0.00 0.00 2.59
2442 2763 5.066593 AGCCAACAAGACTAAAAAGGAGAG 58.933 41.667 0.00 0.00 0.00 3.20
2443 2764 4.216472 GCCAACAAGACTAAAAAGGAGAGG 59.784 45.833 0.00 0.00 0.00 3.69
2461 2782 7.222872 AGGAGAGGAATGATTATCAACATGTC 58.777 38.462 0.00 3.02 0.00 3.06
2487 2810 8.567948 CAAGAACTTTGATGGTGTTACAGTTAT 58.432 33.333 0.00 0.00 0.00 1.89
2491 2814 8.911918 ACTTTGATGGTGTTACAGTTATTGTA 57.088 30.769 0.00 0.00 41.29 2.41
2551 2874 1.228552 AAGCATTTCCGTGGGCACT 60.229 52.632 0.00 0.00 0.00 4.40
2655 2979 3.117046 GCTGATCGCTAGTCCTAACAAC 58.883 50.000 2.84 0.00 35.14 3.32
2658 2982 0.813184 TCGCTAGTCCTAACAACCCG 59.187 55.000 0.00 0.00 0.00 5.28
2664 2988 2.221299 TCCTAACAACCCGCTGGCT 61.221 57.895 0.00 0.00 33.59 4.75
2667 2991 1.577328 CTAACAACCCGCTGGCTGTG 61.577 60.000 3.79 0.00 40.07 3.66
2675 2999 1.950630 CGCTGGCTGTGGCAAAAAC 60.951 57.895 0.00 0.00 37.73 2.43
2713 3037 5.067805 TCTCTAATAACTTCGCTGCAGATGA 59.932 40.000 20.43 11.73 0.00 2.92
2719 3043 2.004733 CTTCGCTGCAGATGACATGAA 58.995 47.619 20.43 7.77 0.00 2.57
2720 3044 1.648504 TCGCTGCAGATGACATGAAG 58.351 50.000 20.43 0.00 0.00 3.02
2723 3047 2.030579 CGCTGCAGATGACATGAAGAAG 59.969 50.000 20.43 0.00 0.00 2.85
2724 3048 3.268330 GCTGCAGATGACATGAAGAAGA 58.732 45.455 20.43 0.00 0.00 2.87
2727 3051 4.644498 TGCAGATGACATGAAGAAGAACA 58.356 39.130 0.00 0.00 0.00 3.18
2728 3052 4.453478 TGCAGATGACATGAAGAAGAACAC 59.547 41.667 0.00 0.00 0.00 3.32
2729 3053 4.453478 GCAGATGACATGAAGAAGAACACA 59.547 41.667 0.00 0.00 0.00 3.72
2730 3054 5.123502 GCAGATGACATGAAGAAGAACACAT 59.876 40.000 0.00 0.00 0.00 3.21
2731 3055 6.349115 GCAGATGACATGAAGAAGAACACATT 60.349 38.462 0.00 0.00 0.00 2.71
2732 3056 7.148356 GCAGATGACATGAAGAAGAACACATTA 60.148 37.037 0.00 0.00 0.00 1.90
2733 3057 8.724229 CAGATGACATGAAGAAGAACACATTAA 58.276 33.333 0.00 0.00 0.00 1.40
2734 3058 8.944029 AGATGACATGAAGAAGAACACATTAAG 58.056 33.333 0.00 0.00 0.00 1.85
2735 3059 7.439157 TGACATGAAGAAGAACACATTAAGG 57.561 36.000 0.00 0.00 0.00 2.69
2736 3060 6.430925 TGACATGAAGAAGAACACATTAAGGG 59.569 38.462 0.00 0.00 0.00 3.95
2737 3061 6.306987 ACATGAAGAAGAACACATTAAGGGT 58.693 36.000 0.00 0.00 32.92 4.34
2739 3063 7.942341 ACATGAAGAAGAACACATTAAGGGTTA 59.058 33.333 0.00 0.00 45.95 2.85
2740 3064 7.979444 TGAAGAAGAACACATTAAGGGTTAG 57.021 36.000 0.00 0.00 45.95 2.34
2741 3065 7.514721 TGAAGAAGAACACATTAAGGGTTAGT 58.485 34.615 0.00 0.00 45.95 2.24
2742 3066 7.444183 TGAAGAAGAACACATTAAGGGTTAGTG 59.556 37.037 0.00 0.00 45.95 2.74
2743 3067 5.705905 AGAAGAACACATTAAGGGTTAGTGC 59.294 40.000 0.00 0.00 45.95 4.40
2744 3068 4.980573 AGAACACATTAAGGGTTAGTGCA 58.019 39.130 0.00 0.00 45.95 4.57
2745 3069 5.381757 AGAACACATTAAGGGTTAGTGCAA 58.618 37.500 0.00 0.00 45.95 4.08
2746 3070 5.473504 AGAACACATTAAGGGTTAGTGCAAG 59.526 40.000 0.00 0.00 45.95 4.01
2747 3071 4.079253 ACACATTAAGGGTTAGTGCAAGG 58.921 43.478 0.00 0.00 33.69 3.61
2748 3072 3.443681 CACATTAAGGGTTAGTGCAAGGG 59.556 47.826 0.00 0.00 0.00 3.95
2749 3073 2.209690 TTAAGGGTTAGTGCAAGGGC 57.790 50.000 0.00 0.00 41.68 5.19
2764 3088 4.453892 GGCAGAGCCCCAAGCCAT 62.454 66.667 0.00 0.00 46.26 4.40
2765 3089 2.832201 GCAGAGCCCCAAGCCATC 60.832 66.667 0.00 0.00 45.47 3.51
2766 3090 3.004951 CAGAGCCCCAAGCCATCT 58.995 61.111 0.00 0.00 45.47 2.90
2767 3091 1.305623 CAGAGCCCCAAGCCATCTT 59.694 57.895 0.00 0.00 45.47 2.40
2768 3092 0.324091 CAGAGCCCCAAGCCATCTTT 60.324 55.000 0.00 0.00 45.47 2.52
2769 3093 0.033699 AGAGCCCCAAGCCATCTTTC 60.034 55.000 0.00 0.00 45.47 2.62
2770 3094 1.379044 AGCCCCAAGCCATCTTTCG 60.379 57.895 0.00 0.00 45.47 3.46
2771 3095 1.378514 GCCCCAAGCCATCTTTCGA 60.379 57.895 0.00 0.00 34.35 3.71
2772 3096 1.379642 GCCCCAAGCCATCTTTCGAG 61.380 60.000 0.00 0.00 34.35 4.04
2773 3097 0.749454 CCCCAAGCCATCTTTCGAGG 60.749 60.000 0.00 0.00 0.00 4.63
2774 3098 0.253044 CCCAAGCCATCTTTCGAGGA 59.747 55.000 0.00 0.00 0.00 3.71
2775 3099 1.340017 CCCAAGCCATCTTTCGAGGAA 60.340 52.381 0.00 0.00 0.00 3.36
2776 3100 2.436417 CCAAGCCATCTTTCGAGGAAA 58.564 47.619 0.00 0.00 0.00 3.13
2813 3137 9.990868 ATTAATGGGTAATACTGGAAAACTCTT 57.009 29.630 0.00 0.00 30.18 2.85
2814 3138 9.816787 TTAATGGGTAATACTGGAAAACTCTTT 57.183 29.630 0.00 0.00 0.00 2.52
2815 3139 7.703058 ATGGGTAATACTGGAAAACTCTTTG 57.297 36.000 0.00 0.00 0.00 2.77
2816 3140 6.843752 TGGGTAATACTGGAAAACTCTTTGA 58.156 36.000 0.00 0.00 0.00 2.69
2817 3141 7.466804 TGGGTAATACTGGAAAACTCTTTGAT 58.533 34.615 0.00 0.00 0.00 2.57
2818 3142 7.947890 TGGGTAATACTGGAAAACTCTTTGATT 59.052 33.333 0.00 0.00 0.00 2.57
2819 3143 8.803235 GGGTAATACTGGAAAACTCTTTGATTT 58.197 33.333 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 8.876790 GTGAAATACCGTTAACTGTTAAGCTAT 58.123 33.333 12.97 6.03 0.00 2.97
72 73 0.394565 GCATAGCACCCTACCCTCAG 59.605 60.000 0.00 0.00 0.00 3.35
73 74 1.054406 GGCATAGCACCCTACCCTCA 61.054 60.000 0.00 0.00 0.00 3.86
97 98 1.448069 GCTTCACTAGCTAGGGCCC 59.552 63.158 24.35 16.46 46.77 5.80
106 107 0.539051 CAGGGGTGGAGCTTCACTAG 59.461 60.000 24.35 8.45 37.75 2.57
107 108 0.909610 CCAGGGGTGGAGCTTCACTA 60.910 60.000 24.35 0.00 37.75 2.74
108 109 2.227036 CCAGGGGTGGAGCTTCACT 61.227 63.158 24.35 1.95 37.75 3.41
109 110 2.352805 CCAGGGGTGGAGCTTCAC 59.647 66.667 17.52 17.52 36.95 3.18
119 120 4.455137 ATGCTAGGGCCCAGGGGT 62.455 66.667 27.56 4.81 37.74 4.95
122 123 0.186873 AATTCATGCTAGGGCCCAGG 59.813 55.000 27.56 17.31 37.74 4.45
126 127 0.185901 TGGGAATTCATGCTAGGGCC 59.814 55.000 7.93 0.00 37.74 5.80
127 128 1.613836 CTGGGAATTCATGCTAGGGC 58.386 55.000 7.93 0.00 39.26 5.19
129 130 1.133699 TGGCTGGGAATTCATGCTAGG 60.134 52.381 7.93 0.00 0.00 3.02
155 161 1.347707 GGCTACATGGGTATAGCAGCA 59.652 52.381 13.30 0.00 44.70 4.41
206 222 3.322211 AATTGTCACATGCCATGGTTG 57.678 42.857 14.67 13.92 33.60 3.77
207 223 4.354893 AAAATTGTCACATGCCATGGTT 57.645 36.364 14.67 0.00 33.60 3.67
208 224 4.354893 AAAAATTGTCACATGCCATGGT 57.645 36.364 14.67 0.00 33.60 3.55
209 225 6.988622 AATAAAAATTGTCACATGCCATGG 57.011 33.333 7.63 7.63 33.60 3.66
210 226 9.119329 CAAAAATAAAAATTGTCACATGCCATG 57.881 29.630 2.40 2.40 0.00 3.66
211 227 7.808856 GCAAAAATAAAAATTGTCACATGCCAT 59.191 29.630 0.00 0.00 0.00 4.40
212 228 7.137426 GCAAAAATAAAAATTGTCACATGCCA 58.863 30.769 0.00 0.00 0.00 4.92
213 229 6.581919 GGCAAAAATAAAAATTGTCACATGCC 59.418 34.615 0.00 0.00 40.08 4.40
214 230 6.581919 GGGCAAAAATAAAAATTGTCACATGC 59.418 34.615 0.00 0.00 30.45 4.06
215 231 7.646314 TGGGCAAAAATAAAAATTGTCACATG 58.354 30.769 0.00 0.00 30.45 3.21
216 232 7.814264 TGGGCAAAAATAAAAATTGTCACAT 57.186 28.000 0.00 0.00 30.45 3.21
217 233 7.814264 ATGGGCAAAAATAAAAATTGTCACA 57.186 28.000 0.00 0.00 30.45 3.58
218 234 9.605955 GTTATGGGCAAAAATAAAAATTGTCAC 57.394 29.630 0.00 0.00 30.45 3.67
219 235 9.566432 AGTTATGGGCAAAAATAAAAATTGTCA 57.434 25.926 0.00 0.00 30.45 3.58
221 237 8.716909 CGAGTTATGGGCAAAAATAAAAATTGT 58.283 29.630 0.00 0.00 0.00 2.71
222 238 8.930760 TCGAGTTATGGGCAAAAATAAAAATTG 58.069 29.630 0.00 0.00 0.00 2.32
223 239 9.495572 TTCGAGTTATGGGCAAAAATAAAAATT 57.504 25.926 0.00 0.00 0.00 1.82
224 240 8.931775 GTTCGAGTTATGGGCAAAAATAAAAAT 58.068 29.630 0.00 0.00 0.00 1.82
225 241 7.385478 GGTTCGAGTTATGGGCAAAAATAAAAA 59.615 33.333 0.00 0.00 0.00 1.94
226 242 6.869388 GGTTCGAGTTATGGGCAAAAATAAAA 59.131 34.615 0.00 0.00 0.00 1.52
227 243 6.209788 AGGTTCGAGTTATGGGCAAAAATAAA 59.790 34.615 0.00 0.00 0.00 1.40
228 244 5.712917 AGGTTCGAGTTATGGGCAAAAATAA 59.287 36.000 0.00 0.00 0.00 1.40
229 245 5.258051 AGGTTCGAGTTATGGGCAAAAATA 58.742 37.500 0.00 0.00 0.00 1.40
230 246 4.086457 AGGTTCGAGTTATGGGCAAAAAT 58.914 39.130 0.00 0.00 0.00 1.82
231 247 3.492337 AGGTTCGAGTTATGGGCAAAAA 58.508 40.909 0.00 0.00 0.00 1.94
232 248 3.149005 AGGTTCGAGTTATGGGCAAAA 57.851 42.857 0.00 0.00 0.00 2.44
233 249 2.871096 AGGTTCGAGTTATGGGCAAA 57.129 45.000 0.00 0.00 0.00 3.68
234 250 2.093341 GGTAGGTTCGAGTTATGGGCAA 60.093 50.000 0.00 0.00 0.00 4.52
235 251 1.483415 GGTAGGTTCGAGTTATGGGCA 59.517 52.381 0.00 0.00 0.00 5.36
236 252 1.483415 TGGTAGGTTCGAGTTATGGGC 59.517 52.381 0.00 0.00 0.00 5.36
237 253 2.159000 GGTGGTAGGTTCGAGTTATGGG 60.159 54.545 0.00 0.00 0.00 4.00
238 254 2.480759 CGGTGGTAGGTTCGAGTTATGG 60.481 54.545 0.00 0.00 0.00 2.74
239 255 2.424601 TCGGTGGTAGGTTCGAGTTATG 59.575 50.000 0.00 0.00 0.00 1.90
240 256 2.424956 GTCGGTGGTAGGTTCGAGTTAT 59.575 50.000 0.00 0.00 32.09 1.89
241 257 1.812571 GTCGGTGGTAGGTTCGAGTTA 59.187 52.381 0.00 0.00 32.09 2.24
242 258 0.600057 GTCGGTGGTAGGTTCGAGTT 59.400 55.000 0.00 0.00 32.09 3.01
243 259 0.538057 TGTCGGTGGTAGGTTCGAGT 60.538 55.000 0.00 0.00 32.09 4.18
244 260 0.815734 ATGTCGGTGGTAGGTTCGAG 59.184 55.000 0.00 0.00 32.09 4.04
245 261 1.259609 AATGTCGGTGGTAGGTTCGA 58.740 50.000 0.00 0.00 0.00 3.71
246 262 2.088950 AAATGTCGGTGGTAGGTTCG 57.911 50.000 0.00 0.00 0.00 3.95
247 263 4.198028 AGTAAATGTCGGTGGTAGGTTC 57.802 45.455 0.00 0.00 0.00 3.62
248 264 5.667466 CATAGTAAATGTCGGTGGTAGGTT 58.333 41.667 0.00 0.00 0.00 3.50
249 265 4.442472 GCATAGTAAATGTCGGTGGTAGGT 60.442 45.833 0.00 0.00 0.00 3.08
250 266 4.056050 GCATAGTAAATGTCGGTGGTAGG 58.944 47.826 0.00 0.00 0.00 3.18
258 274 6.968904 AGCAAATTTGAGCATAGTAAATGTCG 59.031 34.615 22.31 0.00 0.00 4.35
259 275 8.186821 AGAGCAAATTTGAGCATAGTAAATGTC 58.813 33.333 22.31 0.00 0.00 3.06
267 283 4.995124 AGCAAGAGCAAATTTGAGCATAG 58.005 39.130 22.31 7.36 45.49 2.23
316 332 5.470777 CCTTTAACCGGATAGAAACAACACA 59.529 40.000 9.46 0.00 0.00 3.72
322 338 7.592533 GTCAAAAACCTTTAACCGGATAGAAAC 59.407 37.037 9.46 0.00 0.00 2.78
326 342 5.946298 GGTCAAAAACCTTTAACCGGATAG 58.054 41.667 9.46 0.00 45.45 2.08
327 343 5.963176 GGTCAAAAACCTTTAACCGGATA 57.037 39.130 9.46 0.00 45.45 2.59
341 357 8.324306 AGAGAATGTCTCATAGATGGTCAAAAA 58.676 33.333 7.94 0.00 45.73 1.94
348 364 6.014413 ACATCCAGAGAATGTCTCATAGATGG 60.014 42.308 22.48 15.18 45.73 3.51
350 366 7.615039 AACATCCAGAGAATGTCTCATAGAT 57.385 36.000 7.94 4.09 45.73 1.98
374 390 4.207165 GCATATGCAGAGAGGGGTAAAAA 58.793 43.478 22.84 0.00 41.59 1.94
396 412 1.278985 TGGGAGCTCACATGTAAGTGG 59.721 52.381 16.58 0.00 39.93 4.00
408 424 4.524328 TCCTTTTCATTTTTCTGGGAGCTC 59.476 41.667 4.71 4.71 0.00 4.09
409 425 4.482990 TCCTTTTCATTTTTCTGGGAGCT 58.517 39.130 0.00 0.00 0.00 4.09
410 426 4.871933 TCCTTTTCATTTTTCTGGGAGC 57.128 40.909 0.00 0.00 0.00 4.70
411 427 9.777297 TTTTAATCCTTTTCATTTTTCTGGGAG 57.223 29.630 0.00 0.00 0.00 4.30
420 436 9.325248 TGGGAGAGATTTTAATCCTTTTCATTT 57.675 29.630 0.00 0.00 36.04 2.32
421 437 8.899887 TGGGAGAGATTTTAATCCTTTTCATT 57.100 30.769 0.00 0.00 36.04 2.57
422 438 8.753133 GTTGGGAGAGATTTTAATCCTTTTCAT 58.247 33.333 0.00 0.00 36.04 2.57
423 439 7.178451 GGTTGGGAGAGATTTTAATCCTTTTCA 59.822 37.037 0.00 0.00 36.04 2.69
424 440 7.363880 GGGTTGGGAGAGATTTTAATCCTTTTC 60.364 40.741 0.00 0.00 36.04 2.29
425 441 6.440647 GGGTTGGGAGAGATTTTAATCCTTTT 59.559 38.462 0.00 0.00 36.04 2.27
426 442 5.958380 GGGTTGGGAGAGATTTTAATCCTTT 59.042 40.000 0.00 0.00 36.04 3.11
427 443 5.519808 GGGTTGGGAGAGATTTTAATCCTT 58.480 41.667 0.00 0.00 36.04 3.36
428 444 4.385310 CGGGTTGGGAGAGATTTTAATCCT 60.385 45.833 0.00 0.00 36.04 3.24
429 445 3.883489 CGGGTTGGGAGAGATTTTAATCC 59.117 47.826 0.00 0.00 36.04 3.01
430 446 3.315470 GCGGGTTGGGAGAGATTTTAATC 59.685 47.826 0.00 0.00 35.64 1.75
431 447 3.053619 AGCGGGTTGGGAGAGATTTTAAT 60.054 43.478 0.00 0.00 0.00 1.40
432 448 2.307686 AGCGGGTTGGGAGAGATTTTAA 59.692 45.455 0.00 0.00 0.00 1.52
433 449 1.913419 AGCGGGTTGGGAGAGATTTTA 59.087 47.619 0.00 0.00 0.00 1.52
434 450 0.698818 AGCGGGTTGGGAGAGATTTT 59.301 50.000 0.00 0.00 0.00 1.82
435 451 0.253327 GAGCGGGTTGGGAGAGATTT 59.747 55.000 0.00 0.00 0.00 2.17
436 452 0.618968 AGAGCGGGTTGGGAGAGATT 60.619 55.000 0.00 0.00 0.00 2.40
437 453 1.002274 AGAGCGGGTTGGGAGAGAT 59.998 57.895 0.00 0.00 0.00 2.75
438 454 1.682684 GAGAGCGGGTTGGGAGAGA 60.683 63.158 0.00 0.00 0.00 3.10
439 455 1.671901 GAGAGAGCGGGTTGGGAGAG 61.672 65.000 0.00 0.00 0.00 3.20
440 456 1.682684 GAGAGAGCGGGTTGGGAGA 60.683 63.158 0.00 0.00 0.00 3.71
441 457 1.671901 GAGAGAGAGCGGGTTGGGAG 61.672 65.000 0.00 0.00 0.00 4.30
442 458 1.682684 GAGAGAGAGCGGGTTGGGA 60.683 63.158 0.00 0.00 0.00 4.37
443 459 1.671901 GAGAGAGAGAGCGGGTTGGG 61.672 65.000 0.00 0.00 0.00 4.12
444 460 0.682855 AGAGAGAGAGAGCGGGTTGG 60.683 60.000 0.00 0.00 0.00 3.77
445 461 0.738389 GAGAGAGAGAGAGCGGGTTG 59.262 60.000 0.00 0.00 0.00 3.77
446 462 0.623723 AGAGAGAGAGAGAGCGGGTT 59.376 55.000 0.00 0.00 0.00 4.11
447 463 0.180406 GAGAGAGAGAGAGAGCGGGT 59.820 60.000 0.00 0.00 0.00 5.28
448 464 0.469917 AGAGAGAGAGAGAGAGCGGG 59.530 60.000 0.00 0.00 0.00 6.13
449 465 1.138859 TGAGAGAGAGAGAGAGAGCGG 59.861 57.143 0.00 0.00 0.00 5.52
450 466 2.159043 AGTGAGAGAGAGAGAGAGAGCG 60.159 54.545 0.00 0.00 0.00 5.03
451 467 3.550437 AGTGAGAGAGAGAGAGAGAGC 57.450 52.381 0.00 0.00 0.00 4.09
452 468 5.977635 TGTAAGTGAGAGAGAGAGAGAGAG 58.022 45.833 0.00 0.00 0.00 3.20
453 469 6.070251 ACATGTAAGTGAGAGAGAGAGAGAGA 60.070 42.308 0.00 0.00 0.00 3.10
454 470 6.037500 CACATGTAAGTGAGAGAGAGAGAGAG 59.962 46.154 0.00 0.00 42.05 3.20
455 471 5.879777 CACATGTAAGTGAGAGAGAGAGAGA 59.120 44.000 0.00 0.00 42.05 3.10
456 472 5.066375 CCACATGTAAGTGAGAGAGAGAGAG 59.934 48.000 0.00 0.00 42.05 3.20
457 473 4.946772 CCACATGTAAGTGAGAGAGAGAGA 59.053 45.833 0.00 0.00 42.05 3.10
458 474 4.097741 CCCACATGTAAGTGAGAGAGAGAG 59.902 50.000 0.00 0.00 42.05 3.20
459 475 4.019858 CCCACATGTAAGTGAGAGAGAGA 58.980 47.826 0.00 0.00 42.05 3.10
460 476 3.131933 CCCCACATGTAAGTGAGAGAGAG 59.868 52.174 0.00 0.00 42.05 3.20
461 477 3.099905 CCCCACATGTAAGTGAGAGAGA 58.900 50.000 0.00 0.00 42.05 3.10
462 478 2.419297 GCCCCACATGTAAGTGAGAGAG 60.419 54.545 0.00 0.00 42.05 3.20
463 479 1.555075 GCCCCACATGTAAGTGAGAGA 59.445 52.381 0.00 0.00 42.05 3.10
464 480 1.407437 GGCCCCACATGTAAGTGAGAG 60.407 57.143 0.00 0.00 42.05 3.20
465 481 0.618458 GGCCCCACATGTAAGTGAGA 59.382 55.000 0.00 0.00 42.05 3.27
466 482 0.394352 GGGCCCCACATGTAAGTGAG 60.394 60.000 12.23 0.00 42.05 3.51
467 483 1.688811 GGGCCCCACATGTAAGTGA 59.311 57.895 12.23 0.00 42.05 3.41
468 484 1.379843 GGGGCCCCACATGTAAGTG 60.380 63.158 37.61 0.00 39.21 3.16
469 485 2.622447 GGGGGCCCCACATGTAAGT 61.622 63.158 41.80 0.00 44.65 2.24
470 486 2.278738 GGGGGCCCCACATGTAAG 59.721 66.667 41.80 0.00 44.65 2.34
479 495 3.338110 TCTTTTTATTATGGGGGCCCC 57.662 47.619 36.02 36.02 45.71 5.80
480 496 5.427157 TCTTTTCTTTTTATTATGGGGGCCC 59.573 40.000 15.76 15.76 0.00 5.80
514 531 2.692741 GGGAGAGGGGGTTGGGAG 60.693 72.222 0.00 0.00 0.00 4.30
532 549 1.153823 CCCACGTGTAAGCGAGAGG 60.154 63.158 15.65 0.72 35.59 3.69
538 555 2.045340 ATGGGCCCACGTGTAAGC 60.045 61.111 31.51 13.86 0.00 3.09
545 562 2.993471 GCTTTGACATGGGCCCACG 61.993 63.158 31.51 24.84 0.00 4.94
551 568 1.747355 CTAGGCAAGCTTTGACATGGG 59.253 52.381 0.00 0.00 42.71 4.00
555 572 2.878406 GTTGACTAGGCAAGCTTTGACA 59.122 45.455 12.48 0.00 42.71 3.58
569 586 5.123227 CCTTTGACCTGTTCTTGTTGACTA 58.877 41.667 0.00 0.00 0.00 2.59
580 597 2.399607 TGGGCCCCTTTGACCTGTT 61.400 57.895 22.27 0.00 0.00 3.16
581 598 2.780924 TGGGCCCCTTTGACCTGT 60.781 61.111 22.27 0.00 0.00 4.00
584 601 1.682344 GATGTGGGCCCCTTTGACC 60.682 63.158 22.27 0.00 0.00 4.02
586 603 1.691219 GAGATGTGGGCCCCTTTGA 59.309 57.895 22.27 0.00 0.00 2.69
599 616 2.995283 TCCAGCTGTGAAATGGAGATG 58.005 47.619 13.81 0.00 38.19 2.90
602 619 3.508793 ACAAATCCAGCTGTGAAATGGAG 59.491 43.478 13.81 0.00 45.89 3.86
609 626 4.734398 AAAAACACAAATCCAGCTGTGA 57.266 36.364 13.81 10.11 44.68 3.58
631 648 4.813697 TCAAACACGACTGAATCATGAACA 59.186 37.500 0.00 2.52 0.00 3.18
640 657 5.811399 AAGTTCAATCAAACACGACTGAA 57.189 34.783 0.00 0.00 29.26 3.02
653 670 1.399727 CCGCACGTCCAAAGTTCAATC 60.400 52.381 0.00 0.00 0.00 2.67
655 672 0.462225 TCCGCACGTCCAAAGTTCAA 60.462 50.000 0.00 0.00 0.00 2.69
656 673 0.250124 ATCCGCACGTCCAAAGTTCA 60.250 50.000 0.00 0.00 0.00 3.18
657 674 0.872388 AATCCGCACGTCCAAAGTTC 59.128 50.000 0.00 0.00 0.00 3.01
667 684 2.514902 CAATACAAACCAATCCGCACG 58.485 47.619 0.00 0.00 0.00 5.34
671 688 9.474920 AATATAAATGCAATACAAACCAATCCG 57.525 29.630 0.00 0.00 0.00 4.18
677 694 6.364976 GCGGGAATATAAATGCAATACAAACC 59.635 38.462 0.00 0.00 0.00 3.27
706 723 6.147000 TGACGACGTATATGCATGCAATATTT 59.853 34.615 26.68 10.51 0.00 1.40
709 726 4.551388 TGACGACGTATATGCATGCAATA 58.449 39.130 26.68 19.13 0.00 1.90
711 728 2.815478 TGACGACGTATATGCATGCAA 58.185 42.857 26.68 14.46 0.00 4.08
712 729 2.500509 TGACGACGTATATGCATGCA 57.499 45.000 25.04 25.04 0.00 3.96
713 730 4.143835 CAAATGACGACGTATATGCATGC 58.856 43.478 11.82 11.82 0.00 4.06
714 731 4.701361 CCAAATGACGACGTATATGCATG 58.299 43.478 10.16 0.00 0.00 4.06
715 732 3.186409 GCCAAATGACGACGTATATGCAT 59.814 43.478 3.79 3.79 0.00 3.96
716 733 2.542178 GCCAAATGACGACGTATATGCA 59.458 45.455 0.00 0.00 0.00 3.96
717 734 2.800544 AGCCAAATGACGACGTATATGC 59.199 45.455 0.00 0.00 0.00 3.14
718 735 4.318760 CCAAGCCAAATGACGACGTATATG 60.319 45.833 0.00 0.00 0.00 1.78
719 736 3.807622 CCAAGCCAAATGACGACGTATAT 59.192 43.478 0.00 0.00 0.00 0.86
720 737 3.191669 CCAAGCCAAATGACGACGTATA 58.808 45.455 0.00 0.00 0.00 1.47
723 740 1.234615 CCCAAGCCAAATGACGACGT 61.235 55.000 0.00 0.00 0.00 4.34
724 741 0.953471 TCCCAAGCCAAATGACGACG 60.953 55.000 0.00 0.00 0.00 5.12
736 815 4.590850 AAGTCACAAAAAGATCCCAAGC 57.409 40.909 0.00 0.00 0.00 4.01
757 836 3.303526 GCTTCGTCTCTTTGCCGTAAAAA 60.304 43.478 0.00 0.00 0.00 1.94
759 838 1.796459 GCTTCGTCTCTTTGCCGTAAA 59.204 47.619 0.00 0.00 0.00 2.01
760 839 1.269883 TGCTTCGTCTCTTTGCCGTAA 60.270 47.619 0.00 0.00 0.00 3.18
764 843 0.110644 CGTTGCTTCGTCTCTTTGCC 60.111 55.000 0.00 0.00 0.00 4.52
765 844 0.722799 GCGTTGCTTCGTCTCTTTGC 60.723 55.000 3.52 0.00 0.00 3.68
767 846 0.861837 CAGCGTTGCTTCGTCTCTTT 59.138 50.000 0.00 0.00 36.40 2.52
800 1031 2.105128 CGAGTGGCAGGGATCGAC 59.895 66.667 5.67 0.00 37.35 4.20
887 1150 4.160635 GTATGCGTGCCACGGTGC 62.161 66.667 20.07 2.54 42.82 5.01
888 1151 3.848830 CGTATGCGTGCCACGGTG 61.849 66.667 20.07 0.00 42.82 4.94
902 1165 0.670162 GGCTTATCCGCACCTACGTA 59.330 55.000 0.00 0.00 0.00 3.57
1033 1307 1.204704 TCTTGGCGGCGATAGATATGG 59.795 52.381 12.98 0.00 39.76 2.74
1037 1311 1.670087 CGATTCTTGGCGGCGATAGAT 60.670 52.381 12.98 0.00 39.76 1.98
1038 1312 0.318699 CGATTCTTGGCGGCGATAGA 60.319 55.000 12.98 6.51 39.76 1.98
1039 1313 1.891060 GCGATTCTTGGCGGCGATAG 61.891 60.000 12.98 3.79 0.00 2.08
1040 1314 1.954146 GCGATTCTTGGCGGCGATA 60.954 57.895 12.98 0.00 0.00 2.92
1041 1315 3.272334 GCGATTCTTGGCGGCGAT 61.272 61.111 12.98 0.00 0.00 4.58
1060 1334 1.836802 ACTGGCTCTCCTGGATTTCTC 59.163 52.381 0.00 0.00 35.80 2.87
1083 1364 1.091771 CCCACAGACGCCATTGCTAG 61.092 60.000 0.00 0.00 34.43 3.42
1566 1856 1.061799 GTAGTCACACCGCGTGTACG 61.062 60.000 4.92 0.00 45.65 3.67
1567 1857 0.239347 AGTAGTCACACCGCGTGTAC 59.761 55.000 4.92 5.02 45.65 2.90
1568 1858 0.518636 GAGTAGTCACACCGCGTGTA 59.481 55.000 4.92 0.00 45.65 2.90
1591 1881 1.376543 AGGCATCACAGCAAGAATCG 58.623 50.000 0.00 0.00 35.83 3.34
1674 1964 6.972328 GCTTAACATGGGTACAATACAACATG 59.028 38.462 15.53 15.53 44.27 3.21
1675 1965 6.889722 AGCTTAACATGGGTACAATACAACAT 59.110 34.615 0.00 0.00 0.00 2.71
1676 1966 6.242396 AGCTTAACATGGGTACAATACAACA 58.758 36.000 0.00 0.00 0.00 3.33
1677 1967 6.753107 AGCTTAACATGGGTACAATACAAC 57.247 37.500 0.00 0.00 0.00 3.32
1678 1968 6.349777 GCAAGCTTAACATGGGTACAATACAA 60.350 38.462 0.00 0.00 0.00 2.41
1679 1969 5.124776 GCAAGCTTAACATGGGTACAATACA 59.875 40.000 0.00 0.00 0.00 2.29
1680 1970 5.357032 AGCAAGCTTAACATGGGTACAATAC 59.643 40.000 0.00 0.00 0.00 1.89
1681 1971 5.505780 AGCAAGCTTAACATGGGTACAATA 58.494 37.500 0.00 0.00 0.00 1.90
1682 1972 4.344104 AGCAAGCTTAACATGGGTACAAT 58.656 39.130 0.00 0.00 0.00 2.71
1683 1973 3.761897 AGCAAGCTTAACATGGGTACAA 58.238 40.909 0.00 0.00 0.00 2.41
1723 2014 6.964464 ACATGGGTACATATAAAGGTTGTCA 58.036 36.000 0.00 0.00 34.99 3.58
1738 2029 6.770746 AGATATATGTACGGACATGGGTAC 57.229 41.667 23.85 10.46 46.11 3.34
1740 2031 7.786046 TTTAGATATATGTACGGACATGGGT 57.214 36.000 23.85 11.42 46.11 4.51
1741 2032 8.474831 TGATTTAGATATATGTACGGACATGGG 58.525 37.037 23.85 0.00 46.11 4.00
1746 2037 9.680315 GGCTATGATTTAGATATATGTACGGAC 57.320 37.037 0.00 0.00 0.00 4.79
1829 2144 4.329638 TCCTCTGTTCCTCTCTCTGATT 57.670 45.455 0.00 0.00 0.00 2.57
1866 2181 3.817709 ACACTGGGAATTTGTTGTTGG 57.182 42.857 0.00 0.00 0.00 3.77
1872 2187 4.743348 GCCATTTCAACACTGGGAATTTGT 60.743 41.667 0.00 0.00 0.00 2.83
1882 2197 6.654582 GGAAAATATTTGGCCATTTCAACACT 59.345 34.615 23.52 1.10 32.91 3.55
1901 2216 9.719355 GACAACCATACAAAATAAAGGGAAAAT 57.281 29.630 0.00 0.00 0.00 1.82
1958 2277 2.499289 ACTTGCCACAGACTCTATCCAG 59.501 50.000 0.00 0.00 0.00 3.86
2003 2322 6.389830 TTGTTTCATAACTGTGTCAAGCAT 57.610 33.333 0.00 0.00 35.24 3.79
2080 2399 7.540400 CAGATATATGATCAGAGTCCGTTTGAC 59.460 40.741 0.09 0.00 44.82 3.18
2112 2431 2.423373 GGCAAGGCCTCCTATCAATCAA 60.423 50.000 5.23 0.00 46.69 2.57
2113 2432 1.143684 GGCAAGGCCTCCTATCAATCA 59.856 52.381 5.23 0.00 46.69 2.57
2114 2433 1.902938 GGCAAGGCCTCCTATCAATC 58.097 55.000 5.23 0.00 46.69 2.67
2166 2486 4.701651 TGTCCAAGTCCTAATGCTCATTTG 59.298 41.667 0.00 0.00 32.50 2.32
2167 2487 4.922206 TGTCCAAGTCCTAATGCTCATTT 58.078 39.130 0.00 0.00 32.50 2.32
2173 2493 4.439289 GCAAAGATGTCCAAGTCCTAATGC 60.439 45.833 0.00 0.00 0.00 3.56
2218 2538 4.067896 TCTCAACATCTGCAGGTCTTTTC 58.932 43.478 15.13 0.00 0.00 2.29
2237 2557 9.134734 GATTGATATGGTTTTCTACTCGATCTC 57.865 37.037 0.00 0.00 0.00 2.75
2252 2572 6.013032 CCAAGAGTATCCCTGATTGATATGGT 60.013 42.308 0.00 0.00 33.66 3.55
2253 2573 6.413052 CCAAGAGTATCCCTGATTGATATGG 58.587 44.000 0.00 0.00 33.66 2.74
2254 2574 6.413052 CCCAAGAGTATCCCTGATTGATATG 58.587 44.000 0.00 0.00 33.66 1.78
2266 2586 1.614413 CTCGCTACCCCAAGAGTATCC 59.386 57.143 0.00 0.00 33.66 2.59
2296 2616 5.627499 TTCATCAAGTGTTGAGTTATGCC 57.373 39.130 0.00 0.00 43.98 4.40
2297 2617 6.902341 TCTTTCATCAAGTGTTGAGTTATGC 58.098 36.000 0.00 0.00 43.98 3.14
2432 2752 8.884124 TGTTGATAATCATTCCTCTCCTTTTT 57.116 30.769 0.00 0.00 0.00 1.94
2442 2763 8.680903 AGTTCTTGACATGTTGATAATCATTCC 58.319 33.333 0.00 0.00 0.00 3.01
2461 2782 6.377327 ACTGTAACACCATCAAAGTTCTTG 57.623 37.500 0.00 0.00 0.00 3.02
2524 2847 0.641783 CGGAAATGCTTGCATTTCGC 59.358 50.000 34.68 28.87 46.78 4.70
2525 2848 1.650153 CACGGAAATGCTTGCATTTCG 59.350 47.619 34.68 31.40 46.78 3.46
2526 2849 1.994779 CCACGGAAATGCTTGCATTTC 59.005 47.619 34.69 34.69 45.73 2.17
2527 2850 1.338011 CCCACGGAAATGCTTGCATTT 60.338 47.619 27.06 27.06 37.47 2.32
2528 2851 0.247185 CCCACGGAAATGCTTGCATT 59.753 50.000 14.27 14.27 0.00 3.56
2535 2858 0.667184 CAAAGTGCCCACGGAAATGC 60.667 55.000 0.00 0.00 36.20 3.56
2542 2865 0.593128 CCTTCTTCAAAGTGCCCACG 59.407 55.000 0.00 0.00 36.20 4.94
2658 2982 1.595109 GGTTTTTGCCACAGCCAGC 60.595 57.895 0.00 0.00 38.69 4.85
2664 2988 1.561643 TGTTCTGGGTTTTTGCCACA 58.438 45.000 0.00 0.00 0.00 4.17
2667 2991 2.168326 CCATGTTCTGGGTTTTTGCC 57.832 50.000 0.00 0.00 41.82 4.52
2694 3018 3.599343 TGTCATCTGCAGCGAAGTTATT 58.401 40.909 9.47 0.00 0.00 1.40
2713 3037 6.306987 ACCCTTAATGTGTTCTTCTTCATGT 58.693 36.000 0.00 0.00 0.00 3.21
2719 3043 5.705905 GCACTAACCCTTAATGTGTTCTTCT 59.294 40.000 0.00 0.00 0.00 2.85
2720 3044 5.472137 TGCACTAACCCTTAATGTGTTCTTC 59.528 40.000 0.00 0.00 0.00 2.87
2723 3047 5.335661 CCTTGCACTAACCCTTAATGTGTTC 60.336 44.000 0.00 0.00 0.00 3.18
2724 3048 4.522789 CCTTGCACTAACCCTTAATGTGTT 59.477 41.667 0.00 0.00 0.00 3.32
2727 3051 3.697166 CCCTTGCACTAACCCTTAATGT 58.303 45.455 0.00 0.00 0.00 2.71
2728 3052 2.427095 GCCCTTGCACTAACCCTTAATG 59.573 50.000 0.00 0.00 37.47 1.90
2729 3053 2.042433 TGCCCTTGCACTAACCCTTAAT 59.958 45.455 0.00 0.00 44.23 1.40
2730 3054 1.425831 TGCCCTTGCACTAACCCTTAA 59.574 47.619 0.00 0.00 44.23 1.85
2731 3055 1.004277 CTGCCCTTGCACTAACCCTTA 59.996 52.381 0.00 0.00 44.23 2.69
2732 3056 0.251341 CTGCCCTTGCACTAACCCTT 60.251 55.000 0.00 0.00 44.23 3.95
2733 3057 1.133809 TCTGCCCTTGCACTAACCCT 61.134 55.000 0.00 0.00 44.23 4.34
2734 3058 0.678048 CTCTGCCCTTGCACTAACCC 60.678 60.000 0.00 0.00 44.23 4.11
2735 3059 1.308783 GCTCTGCCCTTGCACTAACC 61.309 60.000 0.00 0.00 44.23 2.85
2736 3060 1.308783 GGCTCTGCCCTTGCACTAAC 61.309 60.000 0.00 0.00 44.23 2.34
2737 3061 1.002134 GGCTCTGCCCTTGCACTAA 60.002 57.895 0.00 0.00 44.23 2.24
2738 3062 2.671070 GGCTCTGCCCTTGCACTA 59.329 61.111 0.00 0.00 44.23 2.74
2748 3072 2.832201 GATGGCTTGGGGCTCTGC 60.832 66.667 0.00 0.00 41.46 4.26
2749 3073 0.324091 AAAGATGGCTTGGGGCTCTG 60.324 55.000 0.00 0.00 41.46 3.35
2750 3074 0.033699 GAAAGATGGCTTGGGGCTCT 60.034 55.000 0.00 0.00 41.46 4.09
2751 3075 1.379642 CGAAAGATGGCTTGGGGCTC 61.380 60.000 0.00 0.00 41.46 4.70
2752 3076 1.379044 CGAAAGATGGCTTGGGGCT 60.379 57.895 0.00 0.00 41.46 5.19
2753 3077 1.378514 TCGAAAGATGGCTTGGGGC 60.379 57.895 0.00 0.00 33.79 5.80
2754 3078 0.749454 CCTCGAAAGATGGCTTGGGG 60.749 60.000 0.00 0.00 40.84 4.96
2755 3079 0.253044 TCCTCGAAAGATGGCTTGGG 59.747 55.000 0.00 0.00 40.84 4.12
2756 3080 2.113860 TTCCTCGAAAGATGGCTTGG 57.886 50.000 0.00 0.00 40.84 3.61
2787 3111 9.990868 AAGAGTTTTCCAGTATTACCCATTAAT 57.009 29.630 0.00 0.00 34.55 1.40
2788 3112 9.816787 AAAGAGTTTTCCAGTATTACCCATTAA 57.183 29.630 0.00 0.00 0.00 1.40
2789 3113 9.238368 CAAAGAGTTTTCCAGTATTACCCATTA 57.762 33.333 0.00 0.00 0.00 1.90
2790 3114 7.947890 TCAAAGAGTTTTCCAGTATTACCCATT 59.052 33.333 0.00 0.00 0.00 3.16
2791 3115 7.466804 TCAAAGAGTTTTCCAGTATTACCCAT 58.533 34.615 0.00 0.00 0.00 4.00
2792 3116 6.843752 TCAAAGAGTTTTCCAGTATTACCCA 58.156 36.000 0.00 0.00 0.00 4.51
2793 3117 7.939784 ATCAAAGAGTTTTCCAGTATTACCC 57.060 36.000 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.