Multiple sequence alignment - TraesCS5B01G484900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G484900 chr5B 100.000 2753 0 0 1 2753 656263006 656260254 0.000000e+00 5084
1 TraesCS5B01G484900 chr5D 93.476 1073 51 7 782 1852 520785254 520784199 0.000000e+00 1576
2 TraesCS5B01G484900 chr5D 93.426 791 43 5 1965 2753 520783951 520783168 0.000000e+00 1164
3 TraesCS5B01G484900 chr5D 81.081 370 62 5 416 781 339531832 339531467 3.470000e-74 289
4 TraesCS5B01G484900 chr5A 90.833 1080 72 19 815 1882 649248098 649247034 0.000000e+00 1421
5 TraesCS5B01G484900 chr5A 89.501 962 68 23 1794 2753 649247023 649246093 0.000000e+00 1186
6 TraesCS5B01G484900 chr5A 80.593 371 60 11 416 781 18948960 18948597 2.700000e-70 276
7 TraesCS5B01G484900 chr3B 95.735 211 9 0 1 211 447329800 447329590 9.440000e-90 340
8 TraesCS5B01G484900 chr3B 94.313 211 11 1 1 211 689181079 689181288 3.420000e-84 322
9 TraesCS5B01G484900 chr6D 83.202 381 44 10 416 781 450666868 450666493 5.680000e-87 331
10 TraesCS5B01G484900 chr6D 79.456 331 50 14 405 725 10730811 10730489 4.620000e-53 219
11 TraesCS5B01G484900 chr4A 94.787 211 11 0 1 211 684959941 684960151 2.040000e-86 329
12 TraesCS5B01G484900 chr4A 82.838 303 40 8 431 728 709966049 709966344 7.560000e-66 261
13 TraesCS5B01G484900 chrUn 94.366 213 12 0 1 213 80085012 80084800 7.350000e-86 327
14 TraesCS5B01G484900 chrUn 94.366 213 12 0 1 213 344974168 344973956 7.350000e-86 327
15 TraesCS5B01G484900 chrUn 93.897 213 13 0 1 213 80111092 80110880 3.420000e-84 322
16 TraesCS5B01G484900 chr7A 94.313 211 12 0 1 211 625183341 625183551 9.510000e-85 324
17 TraesCS5B01G484900 chr2A 94.313 211 12 0 1 211 320219764 320219554 9.510000e-85 324
18 TraesCS5B01G484900 chr2A 94.313 211 12 0 1 211 323511533 323511743 9.510000e-85 324
19 TraesCS5B01G484900 chr2A 80.371 377 54 16 416 781 739441920 739441553 4.520000e-68 268
20 TraesCS5B01G484900 chr2A 81.494 308 46 7 426 727 576064678 576064980 2.740000e-60 243
21 TraesCS5B01G484900 chr4D 82.353 374 54 8 416 783 11147231 11147598 5.720000e-82 315
22 TraesCS5B01G484900 chr2D 80.863 371 50 14 426 782 408086209 408086572 3.490000e-69 272
23 TraesCS5B01G484900 chr2D 84.932 146 20 2 640 783 372171956 372172101 2.210000e-31 147


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G484900 chr5B 656260254 656263006 2752 True 5084.0 5084 100.000 1 2753 1 chr5B.!!$R1 2752
1 TraesCS5B01G484900 chr5D 520783168 520785254 2086 True 1370.0 1576 93.451 782 2753 2 chr5D.!!$R2 1971
2 TraesCS5B01G484900 chr5A 649246093 649248098 2005 True 1303.5 1421 90.167 815 2753 2 chr5A.!!$R2 1938

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
258 259 0.03889 GAAGGAGGAGGCTGGCTTTT 59.961 55.0 4.82 0.0 0.0 2.27 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1765 1777 0.107456 CACAGGGGATGGGAGAATCG 59.893 60.0 0.0 0.0 32.1 3.34 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.815777 CGAGCTATCGCGCTAAAATTG 58.184 47.619 5.56 0.00 42.97 2.32
54 55 2.471370 CGAGCTATCGCGCTAAAATTGA 59.529 45.455 5.56 0.00 42.97 2.57
55 56 3.421055 CGAGCTATCGCGCTAAAATTGAG 60.421 47.826 5.56 0.00 42.97 3.02
56 57 2.221981 AGCTATCGCGCTAAAATTGAGC 59.778 45.455 5.56 0.00 42.32 4.26
65 66 4.188948 GCTAAAATTGAGCGAGCTAGTG 57.811 45.455 0.00 0.00 0.00 2.74
66 67 3.619038 GCTAAAATTGAGCGAGCTAGTGT 59.381 43.478 0.00 0.00 0.00 3.55
67 68 4.093556 GCTAAAATTGAGCGAGCTAGTGTT 59.906 41.667 0.00 0.00 0.00 3.32
68 69 4.410492 AAAATTGAGCGAGCTAGTGTTG 57.590 40.909 0.00 0.00 0.00 3.33
69 70 2.015736 ATTGAGCGAGCTAGTGTTGG 57.984 50.000 0.00 0.00 0.00 3.77
70 71 0.670546 TTGAGCGAGCTAGTGTTGGC 60.671 55.000 0.00 0.00 0.00 4.52
71 72 1.216710 GAGCGAGCTAGTGTTGGCT 59.783 57.895 0.00 0.00 44.66 4.75
78 79 3.710209 AGCTAGTGTTGGCTCAAGATT 57.290 42.857 0.00 0.00 36.20 2.40
79 80 4.826274 AGCTAGTGTTGGCTCAAGATTA 57.174 40.909 0.00 0.00 36.20 1.75
80 81 5.165961 AGCTAGTGTTGGCTCAAGATTAA 57.834 39.130 0.00 0.00 36.20 1.40
81 82 4.938226 AGCTAGTGTTGGCTCAAGATTAAC 59.062 41.667 0.00 0.00 36.20 2.01
82 83 4.938226 GCTAGTGTTGGCTCAAGATTAACT 59.062 41.667 0.00 0.00 0.00 2.24
83 84 5.064071 GCTAGTGTTGGCTCAAGATTAACTC 59.936 44.000 0.00 0.00 0.00 3.01
84 85 3.997021 AGTGTTGGCTCAAGATTAACTCG 59.003 43.478 0.00 0.00 0.00 4.18
85 86 3.746492 GTGTTGGCTCAAGATTAACTCGT 59.254 43.478 0.00 0.00 0.00 4.18
86 87 4.213482 GTGTTGGCTCAAGATTAACTCGTT 59.787 41.667 0.00 0.00 0.00 3.85
87 88 4.819630 TGTTGGCTCAAGATTAACTCGTTT 59.180 37.500 0.00 0.00 0.00 3.60
88 89 5.049680 TGTTGGCTCAAGATTAACTCGTTTC 60.050 40.000 0.00 0.00 0.00 2.78
89 90 4.894784 TGGCTCAAGATTAACTCGTTTCT 58.105 39.130 0.00 0.00 0.00 2.52
90 91 4.929808 TGGCTCAAGATTAACTCGTTTCTC 59.070 41.667 0.00 0.00 0.00 2.87
91 92 5.172205 GGCTCAAGATTAACTCGTTTCTCT 58.828 41.667 0.00 0.00 0.00 3.10
92 93 6.071560 TGGCTCAAGATTAACTCGTTTCTCTA 60.072 38.462 0.00 0.00 0.00 2.43
93 94 6.981559 GGCTCAAGATTAACTCGTTTCTCTAT 59.018 38.462 0.00 0.00 0.00 1.98
94 95 7.168469 GGCTCAAGATTAACTCGTTTCTCTATC 59.832 40.741 0.00 0.00 0.00 2.08
95 96 7.096803 GCTCAAGATTAACTCGTTTCTCTATCG 60.097 40.741 0.00 0.00 0.00 2.92
96 97 7.982224 TCAAGATTAACTCGTTTCTCTATCGA 58.018 34.615 0.00 0.00 0.00 3.59
101 102 3.422417 CTCGTTTCTCTATCGAGCCAA 57.578 47.619 0.00 0.00 42.94 4.52
102 103 3.770666 CTCGTTTCTCTATCGAGCCAAA 58.229 45.455 0.00 0.00 42.94 3.28
103 104 4.363999 CTCGTTTCTCTATCGAGCCAAAT 58.636 43.478 0.00 0.00 42.94 2.32
104 105 5.509716 TCGTTTCTCTATCGAGCCAAATA 57.490 39.130 0.00 0.00 37.19 1.40
105 106 5.898174 TCGTTTCTCTATCGAGCCAAATAA 58.102 37.500 0.00 0.00 37.19 1.40
106 107 6.334989 TCGTTTCTCTATCGAGCCAAATAAA 58.665 36.000 0.00 0.00 37.19 1.40
107 108 6.475727 TCGTTTCTCTATCGAGCCAAATAAAG 59.524 38.462 0.00 0.00 37.19 1.85
108 109 6.255887 CGTTTCTCTATCGAGCCAAATAAAGT 59.744 38.462 0.00 0.00 37.19 2.66
109 110 7.402640 GTTTCTCTATCGAGCCAAATAAAGTG 58.597 38.462 0.00 0.00 37.19 3.16
110 111 6.222038 TCTCTATCGAGCCAAATAAAGTGT 57.778 37.500 0.00 0.00 37.19 3.55
111 112 6.640518 TCTCTATCGAGCCAAATAAAGTGTT 58.359 36.000 0.00 0.00 37.19 3.32
112 113 6.757010 TCTCTATCGAGCCAAATAAAGTGTTC 59.243 38.462 0.00 0.00 37.19 3.18
113 114 6.403049 TCTATCGAGCCAAATAAAGTGTTCA 58.597 36.000 0.00 0.00 0.00 3.18
114 115 7.047891 TCTATCGAGCCAAATAAAGTGTTCAT 58.952 34.615 0.00 0.00 0.00 2.57
115 116 8.201464 TCTATCGAGCCAAATAAAGTGTTCATA 58.799 33.333 0.00 0.00 0.00 2.15
116 117 6.417191 TCGAGCCAAATAAAGTGTTCATAC 57.583 37.500 0.00 0.00 0.00 2.39
117 118 6.170506 TCGAGCCAAATAAAGTGTTCATACT 58.829 36.000 0.00 0.00 0.00 2.12
118 119 6.312918 TCGAGCCAAATAAAGTGTTCATACTC 59.687 38.462 0.00 0.00 0.00 2.59
119 120 6.092122 CGAGCCAAATAAAGTGTTCATACTCA 59.908 38.462 0.00 0.00 0.00 3.41
120 121 7.383102 AGCCAAATAAAGTGTTCATACTCAG 57.617 36.000 0.00 0.00 0.00 3.35
121 122 6.030228 GCCAAATAAAGTGTTCATACTCAGC 58.970 40.000 0.00 0.00 0.00 4.26
122 123 6.127897 GCCAAATAAAGTGTTCATACTCAGCT 60.128 38.462 0.00 0.00 0.00 4.24
123 124 7.467623 CCAAATAAAGTGTTCATACTCAGCTC 58.532 38.462 0.00 0.00 0.00 4.09
124 125 7.119699 CCAAATAAAGTGTTCATACTCAGCTCA 59.880 37.037 0.00 0.00 0.00 4.26
125 126 8.671921 CAAATAAAGTGTTCATACTCAGCTCAT 58.328 33.333 0.00 0.00 0.00 2.90
126 127 8.798859 AATAAAGTGTTCATACTCAGCTCATT 57.201 30.769 0.00 0.00 0.00 2.57
127 128 8.798859 ATAAAGTGTTCATACTCAGCTCATTT 57.201 30.769 0.00 0.00 0.00 2.32
128 129 6.734104 AAGTGTTCATACTCAGCTCATTTC 57.266 37.500 0.00 0.00 0.00 2.17
129 130 6.047511 AGTGTTCATACTCAGCTCATTTCT 57.952 37.500 0.00 0.00 0.00 2.52
130 131 6.471146 AGTGTTCATACTCAGCTCATTTCTT 58.529 36.000 0.00 0.00 0.00 2.52
131 132 6.939163 AGTGTTCATACTCAGCTCATTTCTTT 59.061 34.615 0.00 0.00 0.00 2.52
132 133 7.446625 AGTGTTCATACTCAGCTCATTTCTTTT 59.553 33.333 0.00 0.00 0.00 2.27
133 134 7.748241 GTGTTCATACTCAGCTCATTTCTTTTC 59.252 37.037 0.00 0.00 0.00 2.29
134 135 6.653273 TCATACTCAGCTCATTTCTTTTCG 57.347 37.500 0.00 0.00 0.00 3.46
135 136 6.398095 TCATACTCAGCTCATTTCTTTTCGA 58.602 36.000 0.00 0.00 0.00 3.71
136 137 6.533012 TCATACTCAGCTCATTTCTTTTCGAG 59.467 38.462 0.00 0.00 0.00 4.04
137 138 4.636249 ACTCAGCTCATTTCTTTTCGAGT 58.364 39.130 0.00 0.00 0.00 4.18
138 139 4.688413 ACTCAGCTCATTTCTTTTCGAGTC 59.312 41.667 0.00 0.00 0.00 3.36
139 140 3.675225 TCAGCTCATTTCTTTTCGAGTCG 59.325 43.478 6.09 6.09 0.00 4.18
140 141 3.675225 CAGCTCATTTCTTTTCGAGTCGA 59.325 43.478 12.09 12.09 0.00 4.20
141 142 4.328440 CAGCTCATTTCTTTTCGAGTCGAT 59.672 41.667 17.34 0.00 35.23 3.59
142 143 4.564769 AGCTCATTTCTTTTCGAGTCGATC 59.435 41.667 17.34 0.00 35.23 3.69
143 144 4.564769 GCTCATTTCTTTTCGAGTCGATCT 59.435 41.667 17.34 0.00 35.23 2.75
144 145 5.276161 GCTCATTTCTTTTCGAGTCGATCTC 60.276 44.000 17.34 0.00 35.23 2.75
164 165 3.999769 TCGAGTCGAGTCAAAATACGAG 58.000 45.455 19.87 0.80 35.52 4.18
165 166 3.434641 TCGAGTCGAGTCAAAATACGAGT 59.565 43.478 19.87 0.00 40.33 4.18
166 167 4.083643 TCGAGTCGAGTCAAAATACGAGTT 60.084 41.667 19.87 0.00 38.29 3.01
167 168 4.029198 CGAGTCGAGTCAAAATACGAGTTG 59.971 45.833 19.87 0.00 38.29 3.16
168 169 5.117355 AGTCGAGTCAAAATACGAGTTGA 57.883 39.130 0.00 0.00 35.39 3.18
169 170 5.710984 AGTCGAGTCAAAATACGAGTTGAT 58.289 37.500 0.00 0.00 36.23 2.57
170 171 5.800941 AGTCGAGTCAAAATACGAGTTGATC 59.199 40.000 0.00 0.00 36.23 2.92
171 172 5.800941 GTCGAGTCAAAATACGAGTTGATCT 59.199 40.000 0.00 0.00 36.23 2.75
172 173 6.021311 GTCGAGTCAAAATACGAGTTGATCTC 60.021 42.308 0.00 2.96 36.23 2.75
173 174 5.800438 CGAGTCAAAATACGAGTTGATCTCA 59.200 40.000 0.00 0.00 42.88 3.27
174 175 6.308041 CGAGTCAAAATACGAGTTGATCTCAA 59.692 38.462 0.00 0.00 42.88 3.02
175 176 7.462069 CGAGTCAAAATACGAGTTGATCTCAAG 60.462 40.741 0.00 0.00 42.88 3.02
176 177 6.091441 AGTCAAAATACGAGTTGATCTCAAGC 59.909 38.462 0.00 0.00 42.88 4.01
177 178 5.062183 TCAAAATACGAGTTGATCTCAAGCG 59.938 40.000 11.37 11.37 42.88 4.68
178 179 2.561733 TACGAGTTGATCTCAAGCGG 57.438 50.000 15.25 2.79 42.88 5.52
179 180 0.737715 ACGAGTTGATCTCAAGCGGC 60.738 55.000 15.25 0.00 42.88 6.53
180 181 0.459237 CGAGTTGATCTCAAGCGGCT 60.459 55.000 0.00 0.00 42.88 5.52
181 182 1.285578 GAGTTGATCTCAAGCGGCTC 58.714 55.000 1.45 0.00 42.34 4.70
182 183 0.610174 AGTTGATCTCAAGCGGCTCA 59.390 50.000 1.45 0.00 36.39 4.26
183 184 0.723981 GTTGATCTCAAGCGGCTCAC 59.276 55.000 1.45 0.00 36.39 3.51
204 205 2.247790 GCCTCGAGCTTTTCTTGCA 58.752 52.632 6.99 0.00 38.99 4.08
205 206 0.167689 GCCTCGAGCTTTTCTTGCAG 59.832 55.000 6.99 0.00 38.99 4.41
206 207 0.167689 CCTCGAGCTTTTCTTGCAGC 59.832 55.000 6.99 0.00 36.16 5.25
207 208 0.167689 CTCGAGCTTTTCTTGCAGCC 59.832 55.000 0.00 0.00 36.62 4.85
208 209 1.211190 CGAGCTTTTCTTGCAGCCC 59.789 57.895 0.00 0.00 36.62 5.19
209 210 1.239968 CGAGCTTTTCTTGCAGCCCT 61.240 55.000 0.00 0.00 36.62 5.19
210 211 1.826385 GAGCTTTTCTTGCAGCCCTA 58.174 50.000 0.00 0.00 36.62 3.53
211 212 1.470494 GAGCTTTTCTTGCAGCCCTAC 59.530 52.381 0.00 0.00 36.62 3.18
212 213 1.074566 AGCTTTTCTTGCAGCCCTACT 59.925 47.619 0.00 0.00 36.62 2.57
226 227 2.526888 CCTACTGGTGAGGGTGTAGA 57.473 55.000 0.00 0.00 35.66 2.59
227 228 3.033659 CCTACTGGTGAGGGTGTAGAT 57.966 52.381 0.00 0.00 35.66 1.98
228 229 3.375699 CCTACTGGTGAGGGTGTAGATT 58.624 50.000 0.00 0.00 35.66 2.40
229 230 3.385111 CCTACTGGTGAGGGTGTAGATTC 59.615 52.174 0.00 0.00 35.66 2.52
230 231 2.902608 ACTGGTGAGGGTGTAGATTCA 58.097 47.619 0.00 0.00 0.00 2.57
231 232 3.248024 ACTGGTGAGGGTGTAGATTCAA 58.752 45.455 0.00 0.00 0.00 2.69
232 233 3.650942 ACTGGTGAGGGTGTAGATTCAAA 59.349 43.478 0.00 0.00 0.00 2.69
233 234 4.289672 ACTGGTGAGGGTGTAGATTCAAAT 59.710 41.667 0.00 0.00 0.00 2.32
234 235 4.843728 TGGTGAGGGTGTAGATTCAAATC 58.156 43.478 0.00 0.00 35.64 2.17
235 236 4.536090 TGGTGAGGGTGTAGATTCAAATCT 59.464 41.667 9.98 9.98 46.85 2.40
236 237 5.014123 TGGTGAGGGTGTAGATTCAAATCTT 59.986 40.000 10.34 0.00 42.96 2.40
237 238 5.586643 GGTGAGGGTGTAGATTCAAATCTTC 59.413 44.000 10.34 6.51 42.96 2.87
238 239 6.410540 GTGAGGGTGTAGATTCAAATCTTCT 58.589 40.000 10.34 2.50 42.96 2.85
239 240 6.314896 GTGAGGGTGTAGATTCAAATCTTCTG 59.685 42.308 10.34 0.00 42.96 3.02
240 241 6.213397 TGAGGGTGTAGATTCAAATCTTCTGA 59.787 38.462 10.34 0.00 42.96 3.27
241 242 7.020827 AGGGTGTAGATTCAAATCTTCTGAA 57.979 36.000 10.34 0.00 42.96 3.02
242 243 7.108847 AGGGTGTAGATTCAAATCTTCTGAAG 58.891 38.462 11.18 11.18 42.96 3.02
243 244 6.317391 GGGTGTAGATTCAAATCTTCTGAAGG 59.683 42.308 16.83 1.66 42.96 3.46
244 245 7.106239 GGTGTAGATTCAAATCTTCTGAAGGA 58.894 38.462 16.83 4.02 42.96 3.36
245 246 7.279758 GGTGTAGATTCAAATCTTCTGAAGGAG 59.720 40.741 16.83 5.50 42.96 3.69
246 247 7.279758 GTGTAGATTCAAATCTTCTGAAGGAGG 59.720 40.741 16.83 5.48 42.96 4.30
247 248 6.633325 AGATTCAAATCTTCTGAAGGAGGA 57.367 37.500 16.83 7.52 42.96 3.71
248 249 6.652053 AGATTCAAATCTTCTGAAGGAGGAG 58.348 40.000 16.83 4.88 42.96 3.69
249 250 4.833478 TCAAATCTTCTGAAGGAGGAGG 57.167 45.455 16.83 3.61 33.56 4.30
250 251 3.054802 TCAAATCTTCTGAAGGAGGAGGC 60.055 47.826 16.83 0.00 33.56 4.70
251 252 2.566708 ATCTTCTGAAGGAGGAGGCT 57.433 50.000 16.83 0.00 33.56 4.58
252 253 1.566211 TCTTCTGAAGGAGGAGGCTG 58.434 55.000 16.83 0.00 0.00 4.85
253 254 0.540923 CTTCTGAAGGAGGAGGCTGG 59.459 60.000 9.57 0.00 0.00 4.85
254 255 1.557269 TTCTGAAGGAGGAGGCTGGC 61.557 60.000 0.00 0.00 0.00 4.85
255 256 1.994507 CTGAAGGAGGAGGCTGGCT 60.995 63.158 2.24 2.24 0.00 4.75
256 257 1.539869 TGAAGGAGGAGGCTGGCTT 60.540 57.895 4.82 0.00 0.00 4.35
257 258 1.136329 TGAAGGAGGAGGCTGGCTTT 61.136 55.000 4.82 0.00 0.00 3.51
258 259 0.038890 GAAGGAGGAGGCTGGCTTTT 59.961 55.000 4.82 0.00 0.00 2.27
259 260 0.251519 AAGGAGGAGGCTGGCTTTTG 60.252 55.000 4.82 0.00 0.00 2.44
260 261 2.346541 GGAGGAGGCTGGCTTTTGC 61.347 63.158 4.82 0.00 46.64 3.68
261 262 1.303970 GAGGAGGCTGGCTTTTGCT 60.304 57.895 4.82 0.00 46.54 3.91
262 263 0.897401 GAGGAGGCTGGCTTTTGCTT 60.897 55.000 4.82 0.00 46.54 3.91
263 264 0.405585 AGGAGGCTGGCTTTTGCTTA 59.594 50.000 4.82 0.00 46.54 3.09
264 265 0.813821 GGAGGCTGGCTTTTGCTTAG 59.186 55.000 4.82 0.00 46.54 2.18
265 266 0.813821 GAGGCTGGCTTTTGCTTAGG 59.186 55.000 4.82 0.00 46.54 2.69
266 267 0.613012 AGGCTGGCTTTTGCTTAGGG 60.613 55.000 0.00 0.00 46.54 3.53
267 268 1.607801 GGCTGGCTTTTGCTTAGGGG 61.608 60.000 0.00 0.00 46.54 4.79
268 269 1.607801 GCTGGCTTTTGCTTAGGGGG 61.608 60.000 0.00 0.00 46.54 5.40
269 270 0.039618 CTGGCTTTTGCTTAGGGGGA 59.960 55.000 0.00 0.00 46.54 4.81
270 271 0.251608 TGGCTTTTGCTTAGGGGGAC 60.252 55.000 0.00 0.00 46.54 4.46
271 272 0.039764 GGCTTTTGCTTAGGGGGACT 59.960 55.000 0.00 0.00 46.54 3.85
272 273 1.283905 GGCTTTTGCTTAGGGGGACTA 59.716 52.381 0.00 0.00 46.54 2.59
273 274 2.091830 GGCTTTTGCTTAGGGGGACTAT 60.092 50.000 0.00 0.00 46.54 2.12
274 275 3.137728 GGCTTTTGCTTAGGGGGACTATA 59.862 47.826 0.00 0.00 46.54 1.31
275 276 4.385977 GGCTTTTGCTTAGGGGGACTATAA 60.386 45.833 0.00 0.00 46.54 0.98
276 277 5.386060 GCTTTTGCTTAGGGGGACTATAAT 58.614 41.667 0.00 0.00 43.35 1.28
277 278 6.466759 GGCTTTTGCTTAGGGGGACTATAATA 60.467 42.308 0.00 0.00 46.54 0.98
278 279 7.002276 GCTTTTGCTTAGGGGGACTATAATAA 58.998 38.462 0.00 0.00 43.35 1.40
279 280 7.175119 GCTTTTGCTTAGGGGGACTATAATAAG 59.825 40.741 0.00 0.00 43.35 1.73
280 281 6.697641 TTGCTTAGGGGGACTATAATAAGG 57.302 41.667 0.00 0.00 0.00 2.69
281 282 4.534897 TGCTTAGGGGGACTATAATAAGGC 59.465 45.833 0.00 0.00 0.00 4.35
282 283 4.534897 GCTTAGGGGGACTATAATAAGGCA 59.465 45.833 0.00 0.00 0.00 4.75
283 284 5.191921 GCTTAGGGGGACTATAATAAGGCAT 59.808 44.000 0.00 0.00 0.00 4.40
284 285 6.636454 TTAGGGGGACTATAATAAGGCATG 57.364 41.667 0.00 0.00 0.00 4.06
285 286 3.267031 AGGGGGACTATAATAAGGCATGC 59.733 47.826 9.90 9.90 0.00 4.06
286 287 3.010138 GGGGGACTATAATAAGGCATGCA 59.990 47.826 21.36 0.00 0.00 3.96
287 288 4.265073 GGGGACTATAATAAGGCATGCAG 58.735 47.826 21.36 7.96 0.00 4.41
288 289 4.265073 GGGACTATAATAAGGCATGCAGG 58.735 47.826 21.36 0.00 0.00 4.85
289 290 4.265073 GGACTATAATAAGGCATGCAGGG 58.735 47.826 21.36 1.26 0.00 4.45
290 291 4.019321 GGACTATAATAAGGCATGCAGGGA 60.019 45.833 21.36 1.26 0.00 4.20
291 292 5.514834 GGACTATAATAAGGCATGCAGGGAA 60.515 44.000 21.36 0.00 0.00 3.97
292 293 5.316987 ACTATAATAAGGCATGCAGGGAAC 58.683 41.667 21.36 0.00 0.00 3.62
293 294 2.834638 AATAAGGCATGCAGGGAACT 57.165 45.000 21.36 2.68 46.44 3.01
304 305 3.842069 AGGGAACTGTTTCAACCCC 57.158 52.632 10.50 8.41 41.13 4.95
305 306 1.231963 AGGGAACTGTTTCAACCCCT 58.768 50.000 10.18 10.18 41.13 4.79
306 307 1.133482 AGGGAACTGTTTCAACCCCTG 60.133 52.381 14.12 0.00 42.23 4.45
307 308 1.411074 GGGAACTGTTTCAACCCCTGT 60.411 52.381 0.54 0.00 35.00 4.00
308 309 2.384828 GGAACTGTTTCAACCCCTGTT 58.615 47.619 0.00 0.00 32.80 3.16
309 310 2.764010 GGAACTGTTTCAACCCCTGTTT 59.236 45.455 0.00 0.00 32.80 2.83
310 311 3.196901 GGAACTGTTTCAACCCCTGTTTT 59.803 43.478 0.00 0.00 32.80 2.43
311 312 3.885724 ACTGTTTCAACCCCTGTTTTG 57.114 42.857 0.00 0.00 30.42 2.44
312 313 2.499693 ACTGTTTCAACCCCTGTTTTGG 59.500 45.455 0.00 0.00 30.42 3.28
313 314 2.499693 CTGTTTCAACCCCTGTTTTGGT 59.500 45.455 0.00 0.00 36.06 3.67
314 315 2.907042 TGTTTCAACCCCTGTTTTGGTT 59.093 40.909 0.00 0.00 45.60 3.67
315 316 3.328050 TGTTTCAACCCCTGTTTTGGTTT 59.672 39.130 0.00 0.00 42.09 3.27
316 317 3.897141 TTCAACCCCTGTTTTGGTTTC 57.103 42.857 0.00 0.00 42.09 2.78
317 318 2.112190 TCAACCCCTGTTTTGGTTTCC 58.888 47.619 0.00 0.00 42.09 3.13
318 319 1.834263 CAACCCCTGTTTTGGTTTCCA 59.166 47.619 0.00 0.00 42.09 3.53
319 320 1.491668 ACCCCTGTTTTGGTTTCCAC 58.508 50.000 0.00 0.00 30.78 4.02
320 321 1.007842 ACCCCTGTTTTGGTTTCCACT 59.992 47.619 0.00 0.00 30.78 4.00
321 322 1.412343 CCCCTGTTTTGGTTTCCACTG 59.588 52.381 0.00 0.00 30.78 3.66
322 323 2.107366 CCCTGTTTTGGTTTCCACTGT 58.893 47.619 0.00 0.00 30.78 3.55
323 324 2.499693 CCCTGTTTTGGTTTCCACTGTT 59.500 45.455 0.00 0.00 30.78 3.16
324 325 3.520569 CCTGTTTTGGTTTCCACTGTTG 58.479 45.455 0.00 0.00 30.78 3.33
325 326 3.056179 CCTGTTTTGGTTTCCACTGTTGT 60.056 43.478 0.00 0.00 30.78 3.32
326 327 4.562552 CCTGTTTTGGTTTCCACTGTTGTT 60.563 41.667 0.00 0.00 30.78 2.83
327 328 4.310769 TGTTTTGGTTTCCACTGTTGTTG 58.689 39.130 0.00 0.00 30.78 3.33
328 329 4.202264 TGTTTTGGTTTCCACTGTTGTTGT 60.202 37.500 0.00 0.00 30.78 3.32
329 330 3.584406 TTGGTTTCCACTGTTGTTGTG 57.416 42.857 0.00 0.00 30.78 3.33
337 338 3.944422 CACTGTTGTTGTGGTACTCAC 57.056 47.619 7.34 7.34 46.23 3.51
346 347 2.770164 GTGGTACTCACATGGCTTCT 57.230 50.000 0.00 0.00 45.39 2.85
347 348 2.622436 GTGGTACTCACATGGCTTCTC 58.378 52.381 0.00 0.00 45.39 2.87
348 349 2.234908 GTGGTACTCACATGGCTTCTCT 59.765 50.000 0.00 0.00 45.39 3.10
349 350 2.906389 TGGTACTCACATGGCTTCTCTT 59.094 45.455 0.00 0.00 0.00 2.85
350 351 3.327757 TGGTACTCACATGGCTTCTCTTT 59.672 43.478 0.00 0.00 0.00 2.52
351 352 3.935828 GGTACTCACATGGCTTCTCTTTC 59.064 47.826 0.00 0.00 0.00 2.62
352 353 4.323104 GGTACTCACATGGCTTCTCTTTCT 60.323 45.833 0.00 0.00 0.00 2.52
353 354 4.363991 ACTCACATGGCTTCTCTTTCTT 57.636 40.909 0.00 0.00 0.00 2.52
354 355 4.322567 ACTCACATGGCTTCTCTTTCTTC 58.677 43.478 0.00 0.00 0.00 2.87
355 356 4.202398 ACTCACATGGCTTCTCTTTCTTCA 60.202 41.667 0.00 0.00 0.00 3.02
356 357 4.717877 TCACATGGCTTCTCTTTCTTCAA 58.282 39.130 0.00 0.00 0.00 2.69
357 358 5.319453 TCACATGGCTTCTCTTTCTTCAAT 58.681 37.500 0.00 0.00 0.00 2.57
358 359 5.182570 TCACATGGCTTCTCTTTCTTCAATG 59.817 40.000 0.00 0.00 0.00 2.82
359 360 5.182570 CACATGGCTTCTCTTTCTTCAATGA 59.817 40.000 0.00 0.00 0.00 2.57
360 361 5.771666 ACATGGCTTCTCTTTCTTCAATGAA 59.228 36.000 0.00 0.00 0.00 2.57
361 362 6.266103 ACATGGCTTCTCTTTCTTCAATGAAA 59.734 34.615 0.00 0.00 35.07 2.69
362 363 6.906157 TGGCTTCTCTTTCTTCAATGAAAT 57.094 33.333 0.00 0.00 35.68 2.17
363 364 7.294017 TGGCTTCTCTTTCTTCAATGAAATT 57.706 32.000 0.00 0.00 36.63 1.82
364 365 7.729116 TGGCTTCTCTTTCTTCAATGAAATTT 58.271 30.769 0.00 0.00 31.22 1.82
365 366 7.654520 TGGCTTCTCTTTCTTCAATGAAATTTG 59.345 33.333 0.00 0.00 31.22 2.32
366 367 7.117379 GGCTTCTCTTTCTTCAATGAAATTTGG 59.883 37.037 0.00 0.00 31.22 3.28
367 368 7.869429 GCTTCTCTTTCTTCAATGAAATTTGGA 59.131 33.333 0.00 0.00 31.22 3.53
368 369 9.408069 CTTCTCTTTCTTCAATGAAATTTGGAG 57.592 33.333 0.00 2.49 31.22 3.86
369 370 7.373493 TCTCTTTCTTCAATGAAATTTGGAGC 58.627 34.615 0.00 0.00 31.22 4.70
370 371 6.151691 TCTTTCTTCAATGAAATTTGGAGCG 58.848 36.000 0.00 0.00 31.22 5.03
371 372 3.836949 TCTTCAATGAAATTTGGAGCGC 58.163 40.909 0.00 0.00 31.22 5.92
372 373 2.261037 TCAATGAAATTTGGAGCGCG 57.739 45.000 0.00 0.00 31.22 6.86
373 374 1.135431 TCAATGAAATTTGGAGCGCGG 60.135 47.619 8.83 0.00 31.22 6.46
374 375 0.173255 AATGAAATTTGGAGCGCGGG 59.827 50.000 8.83 0.00 26.74 6.13
375 376 1.666209 ATGAAATTTGGAGCGCGGGG 61.666 55.000 8.83 0.00 0.00 5.73
376 377 3.063743 GAAATTTGGAGCGCGGGGG 62.064 63.158 8.83 0.00 0.00 5.40
377 378 3.879180 AAATTTGGAGCGCGGGGGT 62.879 57.895 8.83 0.00 0.00 4.95
393 394 3.017581 GTGGGGGTGGGAGCTGAT 61.018 66.667 0.00 0.00 0.00 2.90
394 395 2.204291 TGGGGGTGGGAGCTGATT 60.204 61.111 0.00 0.00 0.00 2.57
395 396 1.856873 TGGGGGTGGGAGCTGATTT 60.857 57.895 0.00 0.00 0.00 2.17
396 397 1.388133 GGGGGTGGGAGCTGATTTT 59.612 57.895 0.00 0.00 0.00 1.82
397 398 0.252239 GGGGGTGGGAGCTGATTTTT 60.252 55.000 0.00 0.00 0.00 1.94
398 399 0.897621 GGGGTGGGAGCTGATTTTTG 59.102 55.000 0.00 0.00 0.00 2.44
399 400 1.549950 GGGGTGGGAGCTGATTTTTGA 60.550 52.381 0.00 0.00 0.00 2.69
400 401 2.247358 GGGTGGGAGCTGATTTTTGAA 58.753 47.619 0.00 0.00 0.00 2.69
401 402 2.632512 GGGTGGGAGCTGATTTTTGAAA 59.367 45.455 0.00 0.00 0.00 2.69
402 403 3.070878 GGGTGGGAGCTGATTTTTGAAAA 59.929 43.478 0.00 0.00 0.00 2.29
403 404 4.444164 GGGTGGGAGCTGATTTTTGAAAAA 60.444 41.667 5.47 5.47 0.00 1.94
447 448 7.210718 ACTTAAAAAGAATGTAAGGTTCCCG 57.789 36.000 0.00 0.00 0.00 5.14
448 449 6.999871 ACTTAAAAAGAATGTAAGGTTCCCGA 59.000 34.615 0.00 0.00 0.00 5.14
449 450 7.668469 ACTTAAAAAGAATGTAAGGTTCCCGAT 59.332 33.333 0.00 0.00 0.00 4.18
450 451 6.911250 AAAAAGAATGTAAGGTTCCCGATT 57.089 33.333 0.00 0.00 0.00 3.34
451 452 6.911250 AAAAGAATGTAAGGTTCCCGATTT 57.089 33.333 0.00 0.00 0.00 2.17
452 453 8.411991 AAAAAGAATGTAAGGTTCCCGATTTA 57.588 30.769 0.00 0.00 0.00 1.40
453 454 8.589701 AAAAGAATGTAAGGTTCCCGATTTAT 57.410 30.769 0.00 0.00 0.00 1.40
454 455 7.803279 AAGAATGTAAGGTTCCCGATTTATC 57.197 36.000 0.00 0.00 0.00 1.75
455 456 7.138054 AGAATGTAAGGTTCCCGATTTATCT 57.862 36.000 0.00 0.00 0.00 1.98
456 457 7.574607 AGAATGTAAGGTTCCCGATTTATCTT 58.425 34.615 0.00 0.00 0.00 2.40
457 458 8.053355 AGAATGTAAGGTTCCCGATTTATCTTT 58.947 33.333 0.00 0.00 0.00 2.52
458 459 7.803279 ATGTAAGGTTCCCGATTTATCTTTC 57.197 36.000 0.00 0.00 0.00 2.62
459 460 6.954232 TGTAAGGTTCCCGATTTATCTTTCT 58.046 36.000 0.00 0.00 0.00 2.52
460 461 7.399634 TGTAAGGTTCCCGATTTATCTTTCTT 58.600 34.615 0.00 0.00 0.00 2.52
461 462 7.551617 TGTAAGGTTCCCGATTTATCTTTCTTC 59.448 37.037 0.00 0.00 0.00 2.87
462 463 6.314899 AGGTTCCCGATTTATCTTTCTTCT 57.685 37.500 0.00 0.00 0.00 2.85
463 464 6.350103 AGGTTCCCGATTTATCTTTCTTCTC 58.650 40.000 0.00 0.00 0.00 2.87
464 465 6.070194 AGGTTCCCGATTTATCTTTCTTCTCA 60.070 38.462 0.00 0.00 0.00 3.27
465 466 6.037281 GGTTCCCGATTTATCTTTCTTCTCAC 59.963 42.308 0.00 0.00 0.00 3.51
466 467 5.671493 TCCCGATTTATCTTTCTTCTCACC 58.329 41.667 0.00 0.00 0.00 4.02
467 468 5.188948 TCCCGATTTATCTTTCTTCTCACCA 59.811 40.000 0.00 0.00 0.00 4.17
468 469 6.058183 CCCGATTTATCTTTCTTCTCACCAT 58.942 40.000 0.00 0.00 0.00 3.55
469 470 6.203723 CCCGATTTATCTTTCTTCTCACCATC 59.796 42.308 0.00 0.00 0.00 3.51
470 471 6.203723 CCGATTTATCTTTCTTCTCACCATCC 59.796 42.308 0.00 0.00 0.00 3.51
471 472 6.989169 CGATTTATCTTTCTTCTCACCATCCT 59.011 38.462 0.00 0.00 0.00 3.24
472 473 7.497249 CGATTTATCTTTCTTCTCACCATCCTT 59.503 37.037 0.00 0.00 0.00 3.36
473 474 8.744568 ATTTATCTTTCTTCTCACCATCCTTC 57.255 34.615 0.00 0.00 0.00 3.46
474 475 4.193826 TCTTTCTTCTCACCATCCTTCG 57.806 45.455 0.00 0.00 0.00 3.79
475 476 3.578716 TCTTTCTTCTCACCATCCTTCGT 59.421 43.478 0.00 0.00 0.00 3.85
476 477 3.594603 TTCTTCTCACCATCCTTCGTC 57.405 47.619 0.00 0.00 0.00 4.20
477 478 1.825474 TCTTCTCACCATCCTTCGTCC 59.175 52.381 0.00 0.00 0.00 4.79
478 479 1.550524 CTTCTCACCATCCTTCGTCCA 59.449 52.381 0.00 0.00 0.00 4.02
479 480 1.639722 TCTCACCATCCTTCGTCCAA 58.360 50.000 0.00 0.00 0.00 3.53
480 481 1.275291 TCTCACCATCCTTCGTCCAAC 59.725 52.381 0.00 0.00 0.00 3.77
481 482 0.323629 TCACCATCCTTCGTCCAACC 59.676 55.000 0.00 0.00 0.00 3.77
482 483 0.324943 CACCATCCTTCGTCCAACCT 59.675 55.000 0.00 0.00 0.00 3.50
483 484 1.064825 ACCATCCTTCGTCCAACCTT 58.935 50.000 0.00 0.00 0.00 3.50
484 485 1.003233 ACCATCCTTCGTCCAACCTTC 59.997 52.381 0.00 0.00 0.00 3.46
485 486 1.679032 CCATCCTTCGTCCAACCTTCC 60.679 57.143 0.00 0.00 0.00 3.46
486 487 1.279271 CATCCTTCGTCCAACCTTCCT 59.721 52.381 0.00 0.00 0.00 3.36
487 488 0.974383 TCCTTCGTCCAACCTTCCTC 59.026 55.000 0.00 0.00 0.00 3.71
488 489 0.685097 CCTTCGTCCAACCTTCCTCA 59.315 55.000 0.00 0.00 0.00 3.86
489 490 1.279271 CCTTCGTCCAACCTTCCTCAT 59.721 52.381 0.00 0.00 0.00 2.90
490 491 2.500098 CCTTCGTCCAACCTTCCTCATA 59.500 50.000 0.00 0.00 0.00 2.15
491 492 3.134804 CCTTCGTCCAACCTTCCTCATAT 59.865 47.826 0.00 0.00 0.00 1.78
492 493 4.344102 CCTTCGTCCAACCTTCCTCATATA 59.656 45.833 0.00 0.00 0.00 0.86
493 494 4.931661 TCGTCCAACCTTCCTCATATAC 57.068 45.455 0.00 0.00 0.00 1.47
494 495 4.543689 TCGTCCAACCTTCCTCATATACT 58.456 43.478 0.00 0.00 0.00 2.12
495 496 5.698104 TCGTCCAACCTTCCTCATATACTA 58.302 41.667 0.00 0.00 0.00 1.82
496 497 6.131264 TCGTCCAACCTTCCTCATATACTAA 58.869 40.000 0.00 0.00 0.00 2.24
497 498 6.781014 TCGTCCAACCTTCCTCATATACTAAT 59.219 38.462 0.00 0.00 0.00 1.73
498 499 7.039923 TCGTCCAACCTTCCTCATATACTAATC 60.040 40.741 0.00 0.00 0.00 1.75
499 500 7.255836 CGTCCAACCTTCCTCATATACTAATCA 60.256 40.741 0.00 0.00 0.00 2.57
500 501 8.429641 GTCCAACCTTCCTCATATACTAATCAA 58.570 37.037 0.00 0.00 0.00 2.57
501 502 9.170890 TCCAACCTTCCTCATATACTAATCAAT 57.829 33.333 0.00 0.00 0.00 2.57
502 503 9.442047 CCAACCTTCCTCATATACTAATCAATC 57.558 37.037 0.00 0.00 0.00 2.67
505 506 9.159254 ACCTTCCTCATATACTAATCAATCACA 57.841 33.333 0.00 0.00 0.00 3.58
526 527 9.669887 ATCACAATAATTTACGTACCTTAACCA 57.330 29.630 0.00 0.00 0.00 3.67
527 528 9.499479 TCACAATAATTTACGTACCTTAACCAA 57.501 29.630 0.00 0.00 0.00 3.67
539 540 9.559732 ACGTACCTTAACCAATTTTACTTTAGT 57.440 29.630 0.00 0.00 0.00 2.24
567 568 8.918202 ACTTAGTACCAAACATCTGAATTCAA 57.082 30.769 9.88 1.39 0.00 2.69
568 569 9.520515 ACTTAGTACCAAACATCTGAATTCAAT 57.479 29.630 9.88 3.72 0.00 2.57
630 631 8.988546 ATTTACACAATTGTATACTATGGGCA 57.011 30.769 11.53 0.00 38.05 5.36
631 632 8.445275 TTTACACAATTGTATACTATGGGCAG 57.555 34.615 11.53 0.00 38.05 4.85
632 633 5.376625 ACACAATTGTATACTATGGGCAGG 58.623 41.667 11.53 0.00 32.60 4.85
633 634 5.104109 ACACAATTGTATACTATGGGCAGGT 60.104 40.000 11.53 0.00 32.60 4.00
634 635 6.100569 ACACAATTGTATACTATGGGCAGGTA 59.899 38.462 11.53 0.00 32.60 3.08
635 636 6.995686 CACAATTGTATACTATGGGCAGGTAA 59.004 38.462 11.53 0.00 0.00 2.85
636 637 7.500892 CACAATTGTATACTATGGGCAGGTAAA 59.499 37.037 11.53 0.00 0.00 2.01
637 638 8.224720 ACAATTGTATACTATGGGCAGGTAAAT 58.775 33.333 9.97 0.00 0.00 1.40
638 639 8.730680 CAATTGTATACTATGGGCAGGTAAATC 58.269 37.037 4.17 0.00 0.00 2.17
639 640 7.381789 TTGTATACTATGGGCAGGTAAATCA 57.618 36.000 4.17 0.00 0.00 2.57
640 641 6.765403 TGTATACTATGGGCAGGTAAATCAC 58.235 40.000 4.17 0.00 0.00 3.06
641 642 6.557253 TGTATACTATGGGCAGGTAAATCACT 59.443 38.462 4.17 0.00 0.00 3.41
642 643 4.862641 ACTATGGGCAGGTAAATCACTT 57.137 40.909 0.00 0.00 0.00 3.16
643 644 4.781934 ACTATGGGCAGGTAAATCACTTC 58.218 43.478 0.00 0.00 0.00 3.01
644 645 4.475016 ACTATGGGCAGGTAAATCACTTCT 59.525 41.667 0.00 0.00 0.00 2.85
645 646 3.071874 TGGGCAGGTAAATCACTTCTG 57.928 47.619 0.00 0.00 0.00 3.02
646 647 2.642311 TGGGCAGGTAAATCACTTCTGA 59.358 45.455 0.00 0.00 0.00 3.27
647 648 3.266772 TGGGCAGGTAAATCACTTCTGAT 59.733 43.478 0.00 0.00 38.94 2.90
648 649 3.879892 GGGCAGGTAAATCACTTCTGATC 59.120 47.826 0.00 0.00 35.96 2.92
649 650 4.517285 GGCAGGTAAATCACTTCTGATCA 58.483 43.478 0.00 0.00 35.96 2.92
650 651 5.128919 GGCAGGTAAATCACTTCTGATCAT 58.871 41.667 0.00 0.00 35.96 2.45
651 652 6.291377 GGCAGGTAAATCACTTCTGATCATA 58.709 40.000 0.00 0.00 35.96 2.15
652 653 6.767902 GGCAGGTAAATCACTTCTGATCATAA 59.232 38.462 0.00 0.00 35.96 1.90
653 654 7.446625 GGCAGGTAAATCACTTCTGATCATAAT 59.553 37.037 0.00 0.00 35.96 1.28
654 655 9.494271 GCAGGTAAATCACTTCTGATCATAATA 57.506 33.333 0.00 0.00 35.96 0.98
683 684 9.384764 TGGTAAATCACGTACATTATTTGATGA 57.615 29.630 0.00 0.00 0.00 2.92
717 718 8.916628 TTATACAATTGCATATTACAGGCAGA 57.083 30.769 5.05 0.00 46.13 4.26
718 719 9.519191 TTATACAATTGCATATTACAGGCAGAT 57.481 29.630 5.05 0.00 46.13 2.90
720 721 7.822161 ACAATTGCATATTACAGGCAGATAA 57.178 32.000 5.05 0.00 46.13 1.75
721 722 8.236585 ACAATTGCATATTACAGGCAGATAAA 57.763 30.769 5.05 0.00 46.13 1.40
722 723 8.863086 ACAATTGCATATTACAGGCAGATAAAT 58.137 29.630 5.05 0.00 46.13 1.40
723 724 9.350357 CAATTGCATATTACAGGCAGATAAATC 57.650 33.333 0.00 0.00 46.13 2.17
724 725 8.640063 ATTGCATATTACAGGCAGATAAATCA 57.360 30.769 0.00 0.00 46.13 2.57
725 726 7.439157 TGCATATTACAGGCAGATAAATCAC 57.561 36.000 0.00 0.00 39.46 3.06
726 727 6.997476 TGCATATTACAGGCAGATAAATCACA 59.003 34.615 0.00 0.00 39.46 3.58
727 728 7.501892 TGCATATTACAGGCAGATAAATCACAA 59.498 33.333 0.00 0.00 39.46 3.33
728 729 8.019669 GCATATTACAGGCAGATAAATCACAAG 58.980 37.037 0.00 0.00 32.98 3.16
729 730 5.818136 TTACAGGCAGATAAATCACAAGC 57.182 39.130 0.00 0.00 0.00 4.01
730 731 3.960571 ACAGGCAGATAAATCACAAGCT 58.039 40.909 0.00 0.00 0.00 3.74
731 732 5.102953 ACAGGCAGATAAATCACAAGCTA 57.897 39.130 0.00 0.00 0.00 3.32
732 733 5.500234 ACAGGCAGATAAATCACAAGCTAA 58.500 37.500 0.00 0.00 0.00 3.09
733 734 5.355350 ACAGGCAGATAAATCACAAGCTAAC 59.645 40.000 0.00 0.00 0.00 2.34
734 735 5.355071 CAGGCAGATAAATCACAAGCTAACA 59.645 40.000 0.00 0.00 0.00 2.41
735 736 6.039047 CAGGCAGATAAATCACAAGCTAACAT 59.961 38.462 0.00 0.00 0.00 2.71
736 737 7.227314 CAGGCAGATAAATCACAAGCTAACATA 59.773 37.037 0.00 0.00 0.00 2.29
737 738 7.227512 AGGCAGATAAATCACAAGCTAACATAC 59.772 37.037 0.00 0.00 0.00 2.39
738 739 7.227512 GGCAGATAAATCACAAGCTAACATACT 59.772 37.037 0.00 0.00 0.00 2.12
739 740 9.261180 GCAGATAAATCACAAGCTAACATACTA 57.739 33.333 0.00 0.00 0.00 1.82
765 766 9.973450 AAAATATTTATATACCGTTGCAATGCA 57.027 25.926 13.42 2.72 36.47 3.96
766 767 8.964420 AATATTTATATACCGTTGCAATGCAC 57.036 30.769 7.72 2.39 38.71 4.57
767 768 4.460471 TTATATACCGTTGCAATGCACG 57.540 40.909 7.72 14.71 38.71 5.34
770 771 4.340019 CCGTTGCAATGCACGGCA 62.340 61.111 26.54 9.85 42.39 5.69
780 781 3.623848 TGCACGGCATTGTTCTAGT 57.376 47.368 0.00 0.00 31.71 2.57
791 792 9.772973 ACGGCATTGTTCTAGTATCATTTTATA 57.227 29.630 0.00 0.00 0.00 0.98
818 819 9.490379 AACCGATAAGATGAAATTATGGTACTC 57.510 33.333 0.00 0.00 30.57 2.59
851 853 1.006102 CGAAGTGACTCAGCCGGTT 60.006 57.895 1.90 0.00 0.00 4.44
859 861 4.222145 AGTGACTCAGCCGGTTAGATTAAA 59.778 41.667 1.90 0.00 0.00 1.52
865 867 3.434299 CAGCCGGTTAGATTAAACAACGT 59.566 43.478 1.90 0.00 0.00 3.99
873 876 4.737353 AGATTAAACAACGTCGAAACCC 57.263 40.909 0.00 0.00 0.00 4.11
949 952 6.366332 CGAGTTTTATATACCAGGTCATCAGC 59.634 42.308 0.00 0.00 0.00 4.26
972 975 2.173433 CGCCAAGTGTGCATCATCA 58.827 52.632 0.00 0.00 0.00 3.07
991 994 2.885644 CGTCCATTCCGACAGCCG 60.886 66.667 0.00 0.00 38.18 5.52
1273 1276 1.392710 ATCGACCCCCGTCTCATCAC 61.393 60.000 0.00 0.00 39.75 3.06
1279 1282 2.102357 CCGTCTCATCACCCGTCG 59.898 66.667 0.00 0.00 0.00 5.12
1281 1284 2.202756 GTCTCATCACCCGTCGCC 60.203 66.667 0.00 0.00 0.00 5.54
1287 1290 1.758514 ATCACCCGTCGCCTGATCT 60.759 57.895 0.00 0.00 0.00 2.75
1288 1291 2.021068 ATCACCCGTCGCCTGATCTG 62.021 60.000 0.00 0.00 0.00 2.90
1289 1292 2.362503 ACCCGTCGCCTGATCTGA 60.363 61.111 0.38 0.00 0.00 3.27
1290 1293 2.105128 CCCGTCGCCTGATCTGAC 59.895 66.667 0.38 0.13 0.00 3.51
1393 1403 4.756458 GCGCACAGGCTCAGCTCT 62.756 66.667 0.30 0.00 38.10 4.09
1472 1482 2.208640 TACCAACCCCCAGCCAGA 59.791 61.111 0.00 0.00 0.00 3.86
1474 1484 1.570857 TACCAACCCCCAGCCAGATG 61.571 60.000 0.00 0.00 0.00 2.90
1481 1491 1.556373 CCCCAGCCAGATGTCTGTCA 61.556 60.000 9.03 0.00 42.27 3.58
1493 1503 2.958818 TGTCTGTCAGTCTAACCACCT 58.041 47.619 0.00 0.00 0.00 4.00
1532 1543 1.358759 CCCAACAACCTGAACGTGC 59.641 57.895 0.00 0.00 0.00 5.34
1550 1561 3.740115 GTGCTTCCTGGTCTGAAACTTA 58.260 45.455 0.00 0.00 0.00 2.24
1553 1565 4.761739 TGCTTCCTGGTCTGAAACTTAATG 59.238 41.667 0.00 0.00 0.00 1.90
1576 1588 2.599578 AGGTGGTGGCGTACTCGT 60.600 61.111 0.00 0.00 39.49 4.18
1581 1593 0.319083 TGGTGGCGTACTCGTTGATT 59.681 50.000 0.00 0.00 39.49 2.57
1584 1596 2.334838 GTGGCGTACTCGTTGATTTCT 58.665 47.619 0.00 0.00 39.49 2.52
1735 1747 4.164221 TCATCTCTGGGTACAATCTTTCCC 59.836 45.833 0.00 0.00 40.26 3.97
1785 1798 1.216990 GATTCTCCCATCCCCTGTGT 58.783 55.000 0.00 0.00 0.00 3.72
1798 1811 1.139058 CCCTGTGTATGTCACCTAGGC 59.861 57.143 9.30 0.00 45.61 3.93
1799 1812 2.111384 CCTGTGTATGTCACCTAGGCT 58.889 52.381 9.30 0.00 45.61 4.58
1803 1816 4.350245 TGTGTATGTCACCTAGGCTAAGT 58.650 43.478 9.30 0.00 45.61 2.24
1881 2093 1.202486 CCACATGGCATCAATCCAAGC 60.202 52.381 0.00 0.00 37.13 4.01
1887 2099 0.464373 GCATCAATCCAAGCGAGGGA 60.464 55.000 0.00 0.00 39.14 4.20
1894 2109 1.203237 TCCAAGCGAGGGAATGATCA 58.797 50.000 0.00 0.00 0.00 2.92
1895 2110 1.134401 TCCAAGCGAGGGAATGATCAC 60.134 52.381 0.00 0.00 0.00 3.06
1896 2111 1.407299 CCAAGCGAGGGAATGATCACA 60.407 52.381 0.00 0.00 0.00 3.58
1897 2112 1.938577 CAAGCGAGGGAATGATCACAG 59.061 52.381 0.00 0.00 0.00 3.66
1898 2113 1.198713 AGCGAGGGAATGATCACAGT 58.801 50.000 0.00 0.00 0.00 3.55
1899 2114 1.134580 AGCGAGGGAATGATCACAGTG 60.135 52.381 0.00 0.00 0.00 3.66
1963 2178 4.772100 CACTCCCCACATTCCAAAATACTT 59.228 41.667 0.00 0.00 0.00 2.24
1991 2240 9.722056 GGAGTACAAATCTATAATGCAAACAAG 57.278 33.333 0.00 0.00 0.00 3.16
2311 2570 2.315925 AATGGGTGCTCTATGTGTCG 57.684 50.000 0.00 0.00 0.00 4.35
2335 2594 2.462927 CCAATTATCGTCGTCTTCGTCG 59.537 50.000 0.00 1.62 46.06 5.12
2371 2630 5.050091 CGCCTGATCCATAACAGAAACATAC 60.050 44.000 0.00 0.00 36.38 2.39
2398 2657 9.548208 GTAAGAGACAAATAACTGAAAAGATGC 57.452 33.333 0.00 0.00 0.00 3.91
2573 2833 3.554934 AGGTCTGATCAAGTGCAAACAA 58.445 40.909 0.00 0.00 0.00 2.83
2577 2837 5.101628 GTCTGATCAAGTGCAAACAACAAA 58.898 37.500 0.00 0.00 0.00 2.83
2579 2839 3.856521 TGATCAAGTGCAAACAACAAACG 59.143 39.130 0.00 0.00 0.00 3.60
2586 2846 2.159448 TGCAAACAACAAACGAGTCAGG 60.159 45.455 0.00 0.00 0.00 3.86
2601 2861 1.076438 TCAGGGAGACAGTGAGAGGA 58.924 55.000 0.00 0.00 0.00 3.71
2603 2863 2.853077 TCAGGGAGACAGTGAGAGGATA 59.147 50.000 0.00 0.00 0.00 2.59
2606 2866 5.314573 TCAGGGAGACAGTGAGAGGATATAT 59.685 44.000 0.00 0.00 0.00 0.86
2608 2868 7.185487 TCAGGGAGACAGTGAGAGGATATATAT 59.815 40.741 0.00 0.00 0.00 0.86
2611 2871 6.040391 GGAGACAGTGAGAGGATATATATGGC 59.960 46.154 0.00 0.00 0.00 4.40
2612 2872 6.497640 AGACAGTGAGAGGATATATATGGCA 58.502 40.000 0.00 0.00 0.00 4.92
2615 2875 7.977818 ACAGTGAGAGGATATATATGGCAAAA 58.022 34.615 0.00 0.00 0.00 2.44
2616 2876 8.439971 ACAGTGAGAGGATATATATGGCAAAAA 58.560 33.333 0.00 0.00 0.00 1.94
2619 2879 9.507329 GTGAGAGGATATATATGGCAAAAAGAA 57.493 33.333 0.00 0.00 0.00 2.52
2636 2896 9.827411 GCAAAAAGAAAGATACTTCGATTTACT 57.173 29.630 0.00 0.00 0.00 2.24
2652 2912 9.729281 TTCGATTTACTAACCTTGTTCCTTATT 57.271 29.630 0.00 0.00 0.00 1.40
2681 2941 4.926860 GCCACAAGTTTTTATCATTGGC 57.073 40.909 0.00 0.00 41.41 4.52
2736 2996 4.566488 CCAACCTTGTTCCTTATCTGCTCT 60.566 45.833 0.00 0.00 0.00 4.09
2744 3004 3.374764 TCCTTATCTGCTCTAGCCACAA 58.625 45.455 0.00 0.00 41.18 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
44 45 3.619038 ACACTAGCTCGCTCAATTTTAGC 59.381 43.478 0.00 0.26 36.60 3.09
45 46 5.446473 CCAACACTAGCTCGCTCAATTTTAG 60.446 44.000 0.00 0.00 0.00 1.85
46 47 4.391830 CCAACACTAGCTCGCTCAATTTTA 59.608 41.667 0.00 0.00 0.00 1.52
47 48 3.189287 CCAACACTAGCTCGCTCAATTTT 59.811 43.478 0.00 0.00 0.00 1.82
48 49 2.744202 CCAACACTAGCTCGCTCAATTT 59.256 45.455 0.00 0.00 0.00 1.82
49 50 2.350522 CCAACACTAGCTCGCTCAATT 58.649 47.619 0.00 0.00 0.00 2.32
50 51 2.009042 GCCAACACTAGCTCGCTCAAT 61.009 52.381 0.00 0.00 0.00 2.57
51 52 0.670546 GCCAACACTAGCTCGCTCAA 60.671 55.000 0.00 0.00 0.00 3.02
52 53 1.079819 GCCAACACTAGCTCGCTCA 60.080 57.895 0.00 0.00 0.00 4.26
53 54 0.804156 GAGCCAACACTAGCTCGCTC 60.804 60.000 0.00 0.00 45.44 5.03
54 55 1.216710 GAGCCAACACTAGCTCGCT 59.783 57.895 0.00 0.00 45.44 4.93
55 56 3.787458 GAGCCAACACTAGCTCGC 58.213 61.111 0.00 0.00 45.44 5.03
58 59 3.710209 AATCTTGAGCCAACACTAGCT 57.290 42.857 0.00 0.00 43.55 3.32
59 60 4.938226 AGTTAATCTTGAGCCAACACTAGC 59.062 41.667 0.00 0.00 0.00 3.42
60 61 5.289675 CGAGTTAATCTTGAGCCAACACTAG 59.710 44.000 0.00 0.00 0.00 2.57
61 62 5.168569 CGAGTTAATCTTGAGCCAACACTA 58.831 41.667 0.00 0.00 0.00 2.74
62 63 3.997021 CGAGTTAATCTTGAGCCAACACT 59.003 43.478 0.00 0.00 0.00 3.55
63 64 3.746492 ACGAGTTAATCTTGAGCCAACAC 59.254 43.478 0.00 0.00 0.00 3.32
64 65 4.002906 ACGAGTTAATCTTGAGCCAACA 57.997 40.909 0.00 0.00 0.00 3.33
65 66 5.179555 AGAAACGAGTTAATCTTGAGCCAAC 59.820 40.000 0.00 0.00 0.00 3.77
66 67 5.305585 AGAAACGAGTTAATCTTGAGCCAA 58.694 37.500 0.00 0.00 0.00 4.52
67 68 4.894784 AGAAACGAGTTAATCTTGAGCCA 58.105 39.130 0.00 0.00 0.00 4.75
68 69 5.172205 AGAGAAACGAGTTAATCTTGAGCC 58.828 41.667 0.00 0.00 0.00 4.70
69 70 7.096803 CGATAGAGAAACGAGTTAATCTTGAGC 60.097 40.741 7.76 0.00 39.76 4.26
70 71 8.123575 TCGATAGAGAAACGAGTTAATCTTGAG 58.876 37.037 7.76 2.52 42.67 3.02
71 72 7.982224 TCGATAGAGAAACGAGTTAATCTTGA 58.018 34.615 7.76 3.54 42.67 3.02
90 91 6.662414 TGAACACTTTATTTGGCTCGATAG 57.338 37.500 0.00 0.00 0.00 2.08
91 92 7.985184 AGTATGAACACTTTATTTGGCTCGATA 59.015 33.333 0.00 0.00 0.00 2.92
92 93 6.823689 AGTATGAACACTTTATTTGGCTCGAT 59.176 34.615 0.00 0.00 0.00 3.59
93 94 6.170506 AGTATGAACACTTTATTTGGCTCGA 58.829 36.000 0.00 0.00 0.00 4.04
94 95 6.092122 TGAGTATGAACACTTTATTTGGCTCG 59.908 38.462 0.00 0.00 0.00 5.03
95 96 7.377766 TGAGTATGAACACTTTATTTGGCTC 57.622 36.000 0.00 0.00 0.00 4.70
96 97 6.127897 GCTGAGTATGAACACTTTATTTGGCT 60.128 38.462 0.00 0.00 0.00 4.75
97 98 6.030228 GCTGAGTATGAACACTTTATTTGGC 58.970 40.000 0.00 0.00 0.00 4.52
98 99 7.119699 TGAGCTGAGTATGAACACTTTATTTGG 59.880 37.037 0.00 0.00 0.00 3.28
99 100 8.032952 TGAGCTGAGTATGAACACTTTATTTG 57.967 34.615 0.00 0.00 0.00 2.32
100 101 8.798859 ATGAGCTGAGTATGAACACTTTATTT 57.201 30.769 0.00 0.00 0.00 1.40
101 102 8.798859 AATGAGCTGAGTATGAACACTTTATT 57.201 30.769 0.00 0.00 0.00 1.40
102 103 8.798859 AAATGAGCTGAGTATGAACACTTTAT 57.201 30.769 0.00 0.00 0.00 1.40
103 104 8.097038 AGAAATGAGCTGAGTATGAACACTTTA 58.903 33.333 0.00 0.00 0.00 1.85
104 105 6.939163 AGAAATGAGCTGAGTATGAACACTTT 59.061 34.615 0.00 0.00 0.00 2.66
105 106 6.471146 AGAAATGAGCTGAGTATGAACACTT 58.529 36.000 0.00 0.00 0.00 3.16
106 107 6.047511 AGAAATGAGCTGAGTATGAACACT 57.952 37.500 0.00 0.00 0.00 3.55
107 108 6.734104 AAGAAATGAGCTGAGTATGAACAC 57.266 37.500 0.00 0.00 0.00 3.32
108 109 7.360353 CGAAAAGAAATGAGCTGAGTATGAACA 60.360 37.037 0.00 0.00 0.00 3.18
109 110 6.958193 CGAAAAGAAATGAGCTGAGTATGAAC 59.042 38.462 0.00 0.00 0.00 3.18
110 111 6.873605 TCGAAAAGAAATGAGCTGAGTATGAA 59.126 34.615 0.00 0.00 0.00 2.57
111 112 6.398095 TCGAAAAGAAATGAGCTGAGTATGA 58.602 36.000 0.00 0.00 0.00 2.15
112 113 6.312426 ACTCGAAAAGAAATGAGCTGAGTATG 59.688 38.462 0.00 0.00 32.81 2.39
113 114 6.402222 ACTCGAAAAGAAATGAGCTGAGTAT 58.598 36.000 0.00 0.00 32.81 2.12
114 115 5.784177 ACTCGAAAAGAAATGAGCTGAGTA 58.216 37.500 0.00 0.00 32.81 2.59
115 116 4.636249 ACTCGAAAAGAAATGAGCTGAGT 58.364 39.130 0.00 0.00 31.64 3.41
116 117 4.201570 CGACTCGAAAAGAAATGAGCTGAG 60.202 45.833 0.00 0.00 31.64 3.35
117 118 3.675225 CGACTCGAAAAGAAATGAGCTGA 59.325 43.478 0.00 0.00 31.64 4.26
118 119 3.675225 TCGACTCGAAAAGAAATGAGCTG 59.325 43.478 0.00 0.00 31.06 4.24
119 120 3.914312 TCGACTCGAAAAGAAATGAGCT 58.086 40.909 0.00 0.00 31.06 4.09
120 121 4.564769 AGATCGACTCGAAAAGAAATGAGC 59.435 41.667 5.00 0.00 39.99 4.26
121 122 6.254600 GAGATCGACTCGAAAAGAAATGAG 57.745 41.667 5.00 0.00 39.99 2.90
143 144 3.434641 ACTCGTATTTTGACTCGACTCGA 59.565 43.478 0.29 0.29 0.00 4.04
144 145 3.744987 ACTCGTATTTTGACTCGACTCG 58.255 45.455 0.00 0.00 0.00 4.18
145 146 5.152097 TCAACTCGTATTTTGACTCGACTC 58.848 41.667 0.00 0.00 0.00 3.36
146 147 5.117355 TCAACTCGTATTTTGACTCGACT 57.883 39.130 0.00 0.00 0.00 4.18
147 148 5.800941 AGATCAACTCGTATTTTGACTCGAC 59.199 40.000 0.00 0.00 34.61 4.20
148 149 5.950883 AGATCAACTCGTATTTTGACTCGA 58.049 37.500 0.00 0.00 34.61 4.04
149 150 6.249478 GAGATCAACTCGTATTTTGACTCG 57.751 41.667 0.00 0.00 34.61 4.18
162 163 1.285578 GAGCCGCTTGAGATCAACTC 58.714 55.000 0.00 0.00 45.11 3.01
163 164 0.610174 TGAGCCGCTTGAGATCAACT 59.390 50.000 0.00 0.00 0.00 3.16
164 165 0.723981 GTGAGCCGCTTGAGATCAAC 59.276 55.000 0.00 0.00 0.00 3.18
165 166 0.737367 CGTGAGCCGCTTGAGATCAA 60.737 55.000 0.00 0.00 0.00 2.57
166 167 1.153765 CGTGAGCCGCTTGAGATCA 60.154 57.895 0.00 0.00 0.00 2.92
167 168 0.869454 CTCGTGAGCCGCTTGAGATC 60.869 60.000 10.96 0.00 36.19 2.75
168 169 1.140589 CTCGTGAGCCGCTTGAGAT 59.859 57.895 10.96 0.00 36.19 2.75
169 170 2.568612 CTCGTGAGCCGCTTGAGA 59.431 61.111 10.96 3.32 36.19 3.27
184 185 4.064266 CTGCAAGAAAAGCTCGAGGCTC 62.064 54.545 15.58 3.87 44.86 4.70
186 187 0.167689 CTGCAAGAAAAGCTCGAGGC 59.832 55.000 15.58 6.83 37.39 4.70
187 188 0.167689 GCTGCAAGAAAAGCTCGAGG 59.832 55.000 15.58 0.00 36.47 4.63
188 189 0.167689 GGCTGCAAGAAAAGCTCGAG 59.832 55.000 8.45 8.45 39.46 4.04
189 190 1.237285 GGGCTGCAAGAAAAGCTCGA 61.237 55.000 0.50 0.00 39.46 4.04
190 191 1.211190 GGGCTGCAAGAAAAGCTCG 59.789 57.895 0.50 0.00 39.46 5.03
191 192 1.470494 GTAGGGCTGCAAGAAAAGCTC 59.530 52.381 0.50 0.00 40.40 4.09
192 193 1.074566 AGTAGGGCTGCAAGAAAAGCT 59.925 47.619 0.50 0.00 39.46 3.74
193 194 1.200948 CAGTAGGGCTGCAAGAAAAGC 59.799 52.381 0.50 0.00 38.52 3.51
194 195 1.815003 CCAGTAGGGCTGCAAGAAAAG 59.185 52.381 0.50 0.00 43.71 2.27
195 196 1.144913 ACCAGTAGGGCTGCAAGAAAA 59.855 47.619 0.50 0.00 43.71 2.29
196 197 0.771127 ACCAGTAGGGCTGCAAGAAA 59.229 50.000 0.50 0.00 43.71 2.52
197 198 0.036732 CACCAGTAGGGCTGCAAGAA 59.963 55.000 0.50 0.00 43.71 2.52
198 199 0.835971 TCACCAGTAGGGCTGCAAGA 60.836 55.000 0.50 0.00 43.71 3.02
199 200 0.392193 CTCACCAGTAGGGCTGCAAG 60.392 60.000 0.50 0.00 43.71 4.01
200 201 1.679311 CTCACCAGTAGGGCTGCAA 59.321 57.895 0.50 0.00 43.71 4.08
201 202 2.293318 CCTCACCAGTAGGGCTGCA 61.293 63.158 0.50 0.00 43.71 4.41
202 203 2.586792 CCTCACCAGTAGGGCTGC 59.413 66.667 0.00 0.00 43.71 5.25
207 208 2.526888 TCTACACCCTCACCAGTAGG 57.473 55.000 0.00 0.00 42.21 3.18
208 209 4.023980 TGAATCTACACCCTCACCAGTAG 58.976 47.826 0.00 0.00 36.24 2.57
209 210 4.055710 TGAATCTACACCCTCACCAGTA 57.944 45.455 0.00 0.00 0.00 2.74
210 211 2.902608 TGAATCTACACCCTCACCAGT 58.097 47.619 0.00 0.00 0.00 4.00
211 212 3.981071 TTGAATCTACACCCTCACCAG 57.019 47.619 0.00 0.00 0.00 4.00
212 213 4.536090 AGATTTGAATCTACACCCTCACCA 59.464 41.667 4.47 0.00 43.66 4.17
213 214 5.104259 AGATTTGAATCTACACCCTCACC 57.896 43.478 4.47 0.00 43.66 4.02
214 215 6.314896 CAGAAGATTTGAATCTACACCCTCAC 59.685 42.308 6.66 0.00 44.67 3.51
215 216 6.213397 TCAGAAGATTTGAATCTACACCCTCA 59.787 38.462 6.66 0.00 44.67 3.86
216 217 6.644347 TCAGAAGATTTGAATCTACACCCTC 58.356 40.000 6.66 0.81 44.67 4.30
217 218 6.627087 TCAGAAGATTTGAATCTACACCCT 57.373 37.500 6.66 0.00 44.67 4.34
218 219 6.317391 CCTTCAGAAGATTTGAATCTACACCC 59.683 42.308 12.14 0.00 44.67 4.61
219 220 7.106239 TCCTTCAGAAGATTTGAATCTACACC 58.894 38.462 12.14 0.00 44.67 4.16
220 221 7.279758 CCTCCTTCAGAAGATTTGAATCTACAC 59.720 40.741 12.14 3.04 44.67 2.90
221 222 7.180946 TCCTCCTTCAGAAGATTTGAATCTACA 59.819 37.037 12.14 0.00 44.67 2.74
222 223 7.560368 TCCTCCTTCAGAAGATTTGAATCTAC 58.440 38.462 12.14 0.00 44.67 2.59
223 224 7.147585 CCTCCTCCTTCAGAAGATTTGAATCTA 60.148 40.741 12.14 0.00 44.67 1.98
225 226 5.821995 CCTCCTCCTTCAGAAGATTTGAATC 59.178 44.000 12.14 0.00 34.33 2.52
226 227 5.753716 CCTCCTCCTTCAGAAGATTTGAAT 58.246 41.667 12.14 0.00 34.33 2.57
227 228 4.566488 GCCTCCTCCTTCAGAAGATTTGAA 60.566 45.833 12.14 0.00 33.76 2.69
228 229 3.054802 GCCTCCTCCTTCAGAAGATTTGA 60.055 47.826 12.14 0.00 0.00 2.69
229 230 3.054508 AGCCTCCTCCTTCAGAAGATTTG 60.055 47.826 12.14 0.00 0.00 2.32
230 231 3.054508 CAGCCTCCTCCTTCAGAAGATTT 60.055 47.826 12.14 0.00 0.00 2.17
231 232 2.504996 CAGCCTCCTCCTTCAGAAGATT 59.495 50.000 12.14 0.00 0.00 2.40
232 233 2.117865 CAGCCTCCTCCTTCAGAAGAT 58.882 52.381 12.14 0.00 0.00 2.40
233 234 1.566211 CAGCCTCCTCCTTCAGAAGA 58.434 55.000 12.14 0.00 0.00 2.87
234 235 0.540923 CCAGCCTCCTCCTTCAGAAG 59.459 60.000 2.78 2.78 0.00 2.85
235 236 1.557269 GCCAGCCTCCTCCTTCAGAA 61.557 60.000 0.00 0.00 0.00 3.02
236 237 1.992277 GCCAGCCTCCTCCTTCAGA 60.992 63.158 0.00 0.00 0.00 3.27
237 238 1.560866 AAGCCAGCCTCCTCCTTCAG 61.561 60.000 0.00 0.00 0.00 3.02
238 239 1.136329 AAAGCCAGCCTCCTCCTTCA 61.136 55.000 0.00 0.00 0.00 3.02
239 240 0.038890 AAAAGCCAGCCTCCTCCTTC 59.961 55.000 0.00 0.00 0.00 3.46
240 241 0.251519 CAAAAGCCAGCCTCCTCCTT 60.252 55.000 0.00 0.00 0.00 3.36
241 242 1.381851 CAAAAGCCAGCCTCCTCCT 59.618 57.895 0.00 0.00 0.00 3.69
242 243 2.346541 GCAAAAGCCAGCCTCCTCC 61.347 63.158 0.00 0.00 0.00 4.30
243 244 0.897401 AAGCAAAAGCCAGCCTCCTC 60.897 55.000 0.00 0.00 0.00 3.71
244 245 0.405585 TAAGCAAAAGCCAGCCTCCT 59.594 50.000 0.00 0.00 0.00 3.69
245 246 0.813821 CTAAGCAAAAGCCAGCCTCC 59.186 55.000 0.00 0.00 0.00 4.30
246 247 0.813821 CCTAAGCAAAAGCCAGCCTC 59.186 55.000 0.00 0.00 0.00 4.70
247 248 0.613012 CCCTAAGCAAAAGCCAGCCT 60.613 55.000 0.00 0.00 0.00 4.58
248 249 1.607801 CCCCTAAGCAAAAGCCAGCC 61.608 60.000 0.00 0.00 0.00 4.85
249 250 1.607801 CCCCCTAAGCAAAAGCCAGC 61.608 60.000 0.00 0.00 0.00 4.85
250 251 0.039618 TCCCCCTAAGCAAAAGCCAG 59.960 55.000 0.00 0.00 0.00 4.85
251 252 0.251608 GTCCCCCTAAGCAAAAGCCA 60.252 55.000 0.00 0.00 0.00 4.75
252 253 0.039764 AGTCCCCCTAAGCAAAAGCC 59.960 55.000 0.00 0.00 0.00 4.35
253 254 2.801077 TAGTCCCCCTAAGCAAAAGC 57.199 50.000 0.00 0.00 0.00 3.51
254 255 7.665974 CCTTATTATAGTCCCCCTAAGCAAAAG 59.334 40.741 0.00 0.00 0.00 2.27
255 256 7.523415 CCTTATTATAGTCCCCCTAAGCAAAA 58.477 38.462 0.00 0.00 0.00 2.44
256 257 6.466759 GCCTTATTATAGTCCCCCTAAGCAAA 60.467 42.308 0.00 0.00 0.00 3.68
257 258 5.013808 GCCTTATTATAGTCCCCCTAAGCAA 59.986 44.000 0.00 0.00 0.00 3.91
258 259 4.534897 GCCTTATTATAGTCCCCCTAAGCA 59.465 45.833 0.00 0.00 0.00 3.91
259 260 4.534897 TGCCTTATTATAGTCCCCCTAAGC 59.465 45.833 0.00 0.00 0.00 3.09
260 261 6.653989 CATGCCTTATTATAGTCCCCCTAAG 58.346 44.000 0.00 0.00 0.00 2.18
261 262 5.045140 GCATGCCTTATTATAGTCCCCCTAA 60.045 44.000 6.36 0.00 0.00 2.69
262 263 4.473559 GCATGCCTTATTATAGTCCCCCTA 59.526 45.833 6.36 0.00 0.00 3.53
263 264 3.267031 GCATGCCTTATTATAGTCCCCCT 59.733 47.826 6.36 0.00 0.00 4.79
264 265 3.010138 TGCATGCCTTATTATAGTCCCCC 59.990 47.826 16.68 0.00 0.00 5.40
265 266 4.265073 CTGCATGCCTTATTATAGTCCCC 58.735 47.826 16.68 0.00 0.00 4.81
266 267 4.265073 CCTGCATGCCTTATTATAGTCCC 58.735 47.826 16.68 0.00 0.00 4.46
267 268 4.019321 TCCCTGCATGCCTTATTATAGTCC 60.019 45.833 16.68 0.00 0.00 3.85
268 269 5.165961 TCCCTGCATGCCTTATTATAGTC 57.834 43.478 16.68 0.00 0.00 2.59
269 270 5.073691 AGTTCCCTGCATGCCTTATTATAGT 59.926 40.000 16.68 0.00 0.00 2.12
270 271 5.413833 CAGTTCCCTGCATGCCTTATTATAG 59.586 44.000 16.68 2.58 0.00 1.31
271 272 5.163099 ACAGTTCCCTGCATGCCTTATTATA 60.163 40.000 16.68 0.00 42.81 0.98
272 273 4.147321 CAGTTCCCTGCATGCCTTATTAT 58.853 43.478 16.68 0.00 0.00 1.28
273 274 3.053693 ACAGTTCCCTGCATGCCTTATTA 60.054 43.478 16.68 0.00 42.81 0.98
274 275 2.291800 ACAGTTCCCTGCATGCCTTATT 60.292 45.455 16.68 0.00 42.81 1.40
275 276 1.285962 ACAGTTCCCTGCATGCCTTAT 59.714 47.619 16.68 0.00 42.81 1.73
276 277 0.698238 ACAGTTCCCTGCATGCCTTA 59.302 50.000 16.68 0.00 42.81 2.69
277 278 0.178953 AACAGTTCCCTGCATGCCTT 60.179 50.000 16.68 0.00 42.81 4.35
278 279 0.178953 AAACAGTTCCCTGCATGCCT 60.179 50.000 16.68 0.00 42.81 4.75
279 280 0.244721 GAAACAGTTCCCTGCATGCC 59.755 55.000 16.68 0.00 42.81 4.40
280 281 0.961019 TGAAACAGTTCCCTGCATGC 59.039 50.000 11.82 11.82 42.81 4.06
281 282 2.288395 GGTTGAAACAGTTCCCTGCATG 60.288 50.000 0.00 0.00 42.81 4.06
282 283 1.963515 GGTTGAAACAGTTCCCTGCAT 59.036 47.619 0.00 0.00 42.81 3.96
283 284 1.398692 GGTTGAAACAGTTCCCTGCA 58.601 50.000 0.00 0.00 42.81 4.41
284 285 0.673985 GGGTTGAAACAGTTCCCTGC 59.326 55.000 1.16 0.00 42.81 4.85
285 286 1.133482 AGGGGTTGAAACAGTTCCCTG 60.133 52.381 8.45 0.00 42.64 4.45
286 287 1.133482 CAGGGGTTGAAACAGTTCCCT 60.133 52.381 4.00 4.00 44.89 4.20
287 288 1.328279 CAGGGGTTGAAACAGTTCCC 58.672 55.000 0.00 0.00 37.59 3.97
288 289 2.067365 ACAGGGGTTGAAACAGTTCC 57.933 50.000 0.00 0.00 32.28 3.62
289 290 4.180817 CAAAACAGGGGTTGAAACAGTTC 58.819 43.478 0.00 0.00 37.30 3.01
290 291 3.055458 CCAAAACAGGGGTTGAAACAGTT 60.055 43.478 0.00 0.00 37.30 3.16
291 292 2.499693 CCAAAACAGGGGTTGAAACAGT 59.500 45.455 0.00 0.00 37.30 3.55
292 293 2.499693 ACCAAAACAGGGGTTGAAACAG 59.500 45.455 0.00 0.00 37.30 3.16
293 294 2.541466 ACCAAAACAGGGGTTGAAACA 58.459 42.857 0.00 0.00 37.30 2.83
294 295 3.620427 AACCAAAACAGGGGTTGAAAC 57.380 42.857 0.00 0.00 45.35 2.78
295 296 3.055021 GGAAACCAAAACAGGGGTTGAAA 60.055 43.478 0.00 0.00 46.33 2.69
296 297 2.502130 GGAAACCAAAACAGGGGTTGAA 59.498 45.455 0.00 0.00 46.33 2.69
297 298 2.112190 GGAAACCAAAACAGGGGTTGA 58.888 47.619 0.00 0.00 46.33 3.18
298 299 1.834263 TGGAAACCAAAACAGGGGTTG 59.166 47.619 0.00 0.00 46.33 3.77
300 301 1.007842 AGTGGAAACCAAAACAGGGGT 59.992 47.619 0.00 0.00 39.65 4.95
301 302 1.412343 CAGTGGAAACCAAAACAGGGG 59.588 52.381 0.00 0.00 34.18 4.79
302 303 2.107366 ACAGTGGAAACCAAAACAGGG 58.893 47.619 0.00 0.00 34.18 4.45
303 304 3.056179 ACAACAGTGGAAACCAAAACAGG 60.056 43.478 0.00 0.00 34.18 4.00
304 305 4.186856 ACAACAGTGGAAACCAAAACAG 57.813 40.909 0.00 0.00 34.18 3.16
305 306 4.202264 ACAACAACAGTGGAAACCAAAACA 60.202 37.500 0.00 0.00 34.18 2.83
306 307 4.151512 CACAACAACAGTGGAAACCAAAAC 59.848 41.667 0.00 0.00 34.18 2.43
307 308 4.310769 CACAACAACAGTGGAAACCAAAA 58.689 39.130 0.00 0.00 34.18 2.44
308 309 3.919216 CACAACAACAGTGGAAACCAAA 58.081 40.909 0.00 0.00 34.18 3.28
309 310 3.584406 CACAACAACAGTGGAAACCAA 57.416 42.857 0.00 0.00 34.18 3.67
317 318 3.944422 GTGAGTACCACAACAACAGTG 57.056 47.619 8.95 0.00 45.03 3.66
327 328 2.234908 AGAGAAGCCATGTGAGTACCAC 59.765 50.000 7.34 7.34 45.88 4.16
328 329 2.540383 AGAGAAGCCATGTGAGTACCA 58.460 47.619 0.00 0.00 0.00 3.25
329 330 3.618690 AAGAGAAGCCATGTGAGTACC 57.381 47.619 0.00 0.00 0.00 3.34
330 331 4.826556 AGAAAGAGAAGCCATGTGAGTAC 58.173 43.478 0.00 0.00 0.00 2.73
331 332 5.012046 TGAAGAAAGAGAAGCCATGTGAGTA 59.988 40.000 0.00 0.00 0.00 2.59
332 333 4.202398 TGAAGAAAGAGAAGCCATGTGAGT 60.202 41.667 0.00 0.00 0.00 3.41
333 334 4.321718 TGAAGAAAGAGAAGCCATGTGAG 58.678 43.478 0.00 0.00 0.00 3.51
334 335 4.356405 TGAAGAAAGAGAAGCCATGTGA 57.644 40.909 0.00 0.00 0.00 3.58
335 336 5.182570 TCATTGAAGAAAGAGAAGCCATGTG 59.817 40.000 0.00 0.00 0.00 3.21
336 337 5.319453 TCATTGAAGAAAGAGAAGCCATGT 58.681 37.500 0.00 0.00 0.00 3.21
337 338 5.892160 TCATTGAAGAAAGAGAAGCCATG 57.108 39.130 0.00 0.00 0.00 3.66
338 339 6.906157 TTTCATTGAAGAAAGAGAAGCCAT 57.094 33.333 0.00 0.00 32.88 4.40
339 340 6.906157 ATTTCATTGAAGAAAGAGAAGCCA 57.094 33.333 0.00 0.00 40.49 4.75
340 341 7.117379 CCAAATTTCATTGAAGAAAGAGAAGCC 59.883 37.037 0.00 0.00 40.49 4.35
341 342 7.869429 TCCAAATTTCATTGAAGAAAGAGAAGC 59.131 33.333 0.00 0.00 40.49 3.86
342 343 9.408069 CTCCAAATTTCATTGAAGAAAGAGAAG 57.592 33.333 0.00 0.00 40.49 2.85
343 344 7.869429 GCTCCAAATTTCATTGAAGAAAGAGAA 59.131 33.333 14.51 0.00 40.49 2.87
344 345 7.373493 GCTCCAAATTTCATTGAAGAAAGAGA 58.627 34.615 14.51 4.45 40.49 3.10
345 346 6.307318 CGCTCCAAATTTCATTGAAGAAAGAG 59.693 38.462 0.00 5.48 40.49 2.85
346 347 6.151691 CGCTCCAAATTTCATTGAAGAAAGA 58.848 36.000 0.00 0.00 40.49 2.52
347 348 5.164022 GCGCTCCAAATTTCATTGAAGAAAG 60.164 40.000 0.00 0.00 40.49 2.62
348 349 4.685628 GCGCTCCAAATTTCATTGAAGAAA 59.314 37.500 0.00 0.00 41.31 2.52
349 350 4.236935 GCGCTCCAAATTTCATTGAAGAA 58.763 39.130 0.00 0.00 31.84 2.52
350 351 3.670359 CGCGCTCCAAATTTCATTGAAGA 60.670 43.478 5.56 0.00 31.84 2.87
351 352 2.595536 CGCGCTCCAAATTTCATTGAAG 59.404 45.455 5.56 0.00 31.84 3.02
352 353 2.594321 CGCGCTCCAAATTTCATTGAA 58.406 42.857 5.56 0.00 31.84 2.69
353 354 1.135431 CCGCGCTCCAAATTTCATTGA 60.135 47.619 5.56 0.00 31.84 2.57
354 355 1.270971 CCGCGCTCCAAATTTCATTG 58.729 50.000 5.56 0.00 0.00 2.82
355 356 0.173255 CCCGCGCTCCAAATTTCATT 59.827 50.000 5.56 0.00 0.00 2.57
356 357 1.666209 CCCCGCGCTCCAAATTTCAT 61.666 55.000 5.56 0.00 0.00 2.57
357 358 2.339556 CCCCGCGCTCCAAATTTCA 61.340 57.895 5.56 0.00 0.00 2.69
358 359 2.489751 CCCCGCGCTCCAAATTTC 59.510 61.111 5.56 0.00 0.00 2.17
359 360 3.068064 CCCCCGCGCTCCAAATTT 61.068 61.111 5.56 0.00 0.00 1.82
360 361 4.360405 ACCCCCGCGCTCCAAATT 62.360 61.111 5.56 0.00 0.00 1.82
376 377 2.155197 AAATCAGCTCCCACCCCCAC 62.155 60.000 0.00 0.00 0.00 4.61
377 378 1.442886 AAAATCAGCTCCCACCCCCA 61.443 55.000 0.00 0.00 0.00 4.96
378 379 0.252239 AAAAATCAGCTCCCACCCCC 60.252 55.000 0.00 0.00 0.00 5.40
379 380 0.897621 CAAAAATCAGCTCCCACCCC 59.102 55.000 0.00 0.00 0.00 4.95
380 381 1.923356 TCAAAAATCAGCTCCCACCC 58.077 50.000 0.00 0.00 0.00 4.61
381 382 4.335400 TTTTCAAAAATCAGCTCCCACC 57.665 40.909 0.00 0.00 0.00 4.61
441 442 6.037281 GGTGAGAAGAAAGATAAATCGGGAAC 59.963 42.308 0.00 0.00 0.00 3.62
442 443 6.113411 GGTGAGAAGAAAGATAAATCGGGAA 58.887 40.000 0.00 0.00 0.00 3.97
443 444 5.188948 TGGTGAGAAGAAAGATAAATCGGGA 59.811 40.000 0.00 0.00 0.00 5.14
444 445 5.428253 TGGTGAGAAGAAAGATAAATCGGG 58.572 41.667 0.00 0.00 0.00 5.14
445 446 6.203723 GGATGGTGAGAAGAAAGATAAATCGG 59.796 42.308 0.00 0.00 0.00 4.18
446 447 6.989169 AGGATGGTGAGAAGAAAGATAAATCG 59.011 38.462 0.00 0.00 0.00 3.34
447 448 8.744568 AAGGATGGTGAGAAGAAAGATAAATC 57.255 34.615 0.00 0.00 0.00 2.17
448 449 7.497249 CGAAGGATGGTGAGAAGAAAGATAAAT 59.503 37.037 0.00 0.00 0.00 1.40
449 450 6.818644 CGAAGGATGGTGAGAAGAAAGATAAA 59.181 38.462 0.00 0.00 0.00 1.40
450 451 6.070767 ACGAAGGATGGTGAGAAGAAAGATAA 60.071 38.462 0.00 0.00 0.00 1.75
451 452 5.422331 ACGAAGGATGGTGAGAAGAAAGATA 59.578 40.000 0.00 0.00 0.00 1.98
452 453 4.223923 ACGAAGGATGGTGAGAAGAAAGAT 59.776 41.667 0.00 0.00 0.00 2.40
453 454 3.578716 ACGAAGGATGGTGAGAAGAAAGA 59.421 43.478 0.00 0.00 0.00 2.52
454 455 3.929610 GACGAAGGATGGTGAGAAGAAAG 59.070 47.826 0.00 0.00 0.00 2.62
455 456 3.306780 GGACGAAGGATGGTGAGAAGAAA 60.307 47.826 0.00 0.00 0.00 2.52
456 457 2.233922 GGACGAAGGATGGTGAGAAGAA 59.766 50.000 0.00 0.00 0.00 2.52
457 458 1.825474 GGACGAAGGATGGTGAGAAGA 59.175 52.381 0.00 0.00 0.00 2.87
458 459 1.550524 TGGACGAAGGATGGTGAGAAG 59.449 52.381 0.00 0.00 0.00 2.85
459 460 1.639722 TGGACGAAGGATGGTGAGAA 58.360 50.000 0.00 0.00 0.00 2.87
460 461 1.275291 GTTGGACGAAGGATGGTGAGA 59.725 52.381 0.00 0.00 0.00 3.27
461 462 1.676014 GGTTGGACGAAGGATGGTGAG 60.676 57.143 0.00 0.00 0.00 3.51
462 463 0.323629 GGTTGGACGAAGGATGGTGA 59.676 55.000 0.00 0.00 0.00 4.02
463 464 0.324943 AGGTTGGACGAAGGATGGTG 59.675 55.000 0.00 0.00 0.00 4.17
464 465 1.003233 GAAGGTTGGACGAAGGATGGT 59.997 52.381 0.00 0.00 0.00 3.55
465 466 1.679032 GGAAGGTTGGACGAAGGATGG 60.679 57.143 0.00 0.00 0.00 3.51
466 467 1.279271 AGGAAGGTTGGACGAAGGATG 59.721 52.381 0.00 0.00 0.00 3.51
467 468 1.555533 GAGGAAGGTTGGACGAAGGAT 59.444 52.381 0.00 0.00 0.00 3.24
468 469 0.974383 GAGGAAGGTTGGACGAAGGA 59.026 55.000 0.00 0.00 0.00 3.36
469 470 0.685097 TGAGGAAGGTTGGACGAAGG 59.315 55.000 0.00 0.00 0.00 3.46
470 471 2.770164 ATGAGGAAGGTTGGACGAAG 57.230 50.000 0.00 0.00 0.00 3.79
471 472 4.960469 AGTATATGAGGAAGGTTGGACGAA 59.040 41.667 0.00 0.00 0.00 3.85
472 473 4.543689 AGTATATGAGGAAGGTTGGACGA 58.456 43.478 0.00 0.00 0.00 4.20
473 474 4.939052 AGTATATGAGGAAGGTTGGACG 57.061 45.455 0.00 0.00 0.00 4.79
474 475 7.963532 TGATTAGTATATGAGGAAGGTTGGAC 58.036 38.462 0.00 0.00 0.00 4.02
475 476 8.561536 TTGATTAGTATATGAGGAAGGTTGGA 57.438 34.615 0.00 0.00 0.00 3.53
476 477 9.442047 GATTGATTAGTATATGAGGAAGGTTGG 57.558 37.037 0.00 0.00 0.00 3.77
479 480 9.159254 TGTGATTGATTAGTATATGAGGAAGGT 57.841 33.333 0.00 0.00 0.00 3.50
500 501 9.669887 TGGTTAAGGTACGTAAATTATTGTGAT 57.330 29.630 0.00 0.00 33.54 3.06
501 502 9.499479 TTGGTTAAGGTACGTAAATTATTGTGA 57.501 29.630 0.00 0.00 33.54 3.58
513 514 9.559732 ACTAAAGTAAAATTGGTTAAGGTACGT 57.440 29.630 0.00 0.00 0.00 3.57
542 543 8.918202 TTGAATTCAGATGTTTGGTACTAAGT 57.082 30.769 8.41 0.00 0.00 2.24
605 606 8.988546 TGCCCATAGTATACAATTGTGTAAAT 57.011 30.769 21.42 12.25 43.41 1.40
606 607 7.500892 CCTGCCCATAGTATACAATTGTGTAAA 59.499 37.037 21.42 10.59 43.41 2.01
607 608 6.995686 CCTGCCCATAGTATACAATTGTGTAA 59.004 38.462 21.42 5.34 43.41 2.41
608 609 6.100569 ACCTGCCCATAGTATACAATTGTGTA 59.899 38.462 21.42 15.84 44.29 2.90
609 610 5.104109 ACCTGCCCATAGTATACAATTGTGT 60.104 40.000 21.42 16.95 42.09 3.72
610 611 5.376625 ACCTGCCCATAGTATACAATTGTG 58.623 41.667 21.42 2.18 0.00 3.33
611 612 5.646692 ACCTGCCCATAGTATACAATTGT 57.353 39.130 16.68 16.68 0.00 2.71
612 613 8.635765 ATTTACCTGCCCATAGTATACAATTG 57.364 34.615 3.24 3.24 0.00 2.32
613 614 8.444783 TGATTTACCTGCCCATAGTATACAATT 58.555 33.333 5.50 0.00 0.00 2.32
614 615 7.883311 GTGATTTACCTGCCCATAGTATACAAT 59.117 37.037 5.50 0.00 0.00 2.71
615 616 7.071950 AGTGATTTACCTGCCCATAGTATACAA 59.928 37.037 5.50 0.00 0.00 2.41
616 617 6.557253 AGTGATTTACCTGCCCATAGTATACA 59.443 38.462 5.50 0.00 0.00 2.29
617 618 7.005709 AGTGATTTACCTGCCCATAGTATAC 57.994 40.000 0.00 0.00 0.00 1.47
618 619 7.512746 AGAAGTGATTTACCTGCCCATAGTATA 59.487 37.037 0.00 0.00 0.00 1.47
619 620 6.330250 AGAAGTGATTTACCTGCCCATAGTAT 59.670 38.462 0.00 0.00 0.00 2.12
620 621 5.665812 AGAAGTGATTTACCTGCCCATAGTA 59.334 40.000 0.00 0.00 0.00 1.82
621 622 4.475016 AGAAGTGATTTACCTGCCCATAGT 59.525 41.667 0.00 0.00 0.00 2.12
622 623 4.818546 CAGAAGTGATTTACCTGCCCATAG 59.181 45.833 0.00 0.00 0.00 2.23
623 624 4.473196 TCAGAAGTGATTTACCTGCCCATA 59.527 41.667 0.00 0.00 0.00 2.74
624 625 3.266772 TCAGAAGTGATTTACCTGCCCAT 59.733 43.478 0.00 0.00 0.00 4.00
625 626 2.642311 TCAGAAGTGATTTACCTGCCCA 59.358 45.455 0.00 0.00 0.00 5.36
626 627 3.350219 TCAGAAGTGATTTACCTGCCC 57.650 47.619 0.00 0.00 0.00 5.36
627 628 4.517285 TGATCAGAAGTGATTTACCTGCC 58.483 43.478 0.00 0.00 43.92 4.85
628 629 7.792374 TTATGATCAGAAGTGATTTACCTGC 57.208 36.000 0.09 0.00 43.92 4.85
657 658 9.384764 TCATCAAATAATGTACGTGATTTACCA 57.615 29.630 9.67 0.00 0.00 3.25
691 692 9.348476 TCTGCCTGTAATATGCAATTGTATAAA 57.652 29.630 18.41 8.62 34.06 1.40
692 693 8.916628 TCTGCCTGTAATATGCAATTGTATAA 57.083 30.769 18.41 2.53 34.06 0.98
694 695 9.519191 TTATCTGCCTGTAATATGCAATTGTAT 57.481 29.630 13.75 13.75 34.06 2.29
695 696 8.916628 TTATCTGCCTGTAATATGCAATTGTA 57.083 30.769 7.40 2.30 34.06 2.41
696 697 7.822161 TTATCTGCCTGTAATATGCAATTGT 57.178 32.000 7.40 0.00 34.06 2.71
697 698 9.350357 GATTTATCTGCCTGTAATATGCAATTG 57.650 33.333 0.00 0.00 34.06 2.32
698 699 9.081204 TGATTTATCTGCCTGTAATATGCAATT 57.919 29.630 0.00 0.00 34.06 2.32
699 700 8.517878 GTGATTTATCTGCCTGTAATATGCAAT 58.482 33.333 0.00 0.00 34.06 3.56
700 701 7.501892 TGTGATTTATCTGCCTGTAATATGCAA 59.498 33.333 0.00 0.00 34.06 4.08
701 702 6.997476 TGTGATTTATCTGCCTGTAATATGCA 59.003 34.615 0.00 0.00 0.00 3.96
702 703 7.439157 TGTGATTTATCTGCCTGTAATATGC 57.561 36.000 0.00 0.00 0.00 3.14
703 704 8.019669 GCTTGTGATTTATCTGCCTGTAATATG 58.980 37.037 0.00 0.00 0.00 1.78
704 705 7.941238 AGCTTGTGATTTATCTGCCTGTAATAT 59.059 33.333 0.00 0.00 0.00 1.28
705 706 7.282585 AGCTTGTGATTTATCTGCCTGTAATA 58.717 34.615 0.00 0.00 0.00 0.98
706 707 6.125029 AGCTTGTGATTTATCTGCCTGTAAT 58.875 36.000 0.00 0.00 0.00 1.89
707 708 5.500234 AGCTTGTGATTTATCTGCCTGTAA 58.500 37.500 0.00 0.00 0.00 2.41
708 709 5.102953 AGCTTGTGATTTATCTGCCTGTA 57.897 39.130 0.00 0.00 0.00 2.74
709 710 3.960571 AGCTTGTGATTTATCTGCCTGT 58.039 40.909 0.00 0.00 0.00 4.00
710 711 5.355071 TGTTAGCTTGTGATTTATCTGCCTG 59.645 40.000 0.00 0.00 0.00 4.85
711 712 5.500234 TGTTAGCTTGTGATTTATCTGCCT 58.500 37.500 0.00 0.00 0.00 4.75
712 713 5.818136 TGTTAGCTTGTGATTTATCTGCC 57.182 39.130 0.00 0.00 0.00 4.85
713 714 8.147642 AGTATGTTAGCTTGTGATTTATCTGC 57.852 34.615 0.00 0.00 0.00 4.26
739 740 9.973450 TGCATTGCAACGGTATATAAATATTTT 57.027 25.926 9.33 0.00 34.76 1.82
740 741 9.405587 GTGCATTGCAACGGTATATAAATATTT 57.594 29.630 13.94 5.89 41.47 1.40
741 742 7.748683 CGTGCATTGCAACGGTATATAAATATT 59.251 33.333 13.94 0.00 41.47 1.28
742 743 7.240674 CGTGCATTGCAACGGTATATAAATAT 58.759 34.615 13.94 0.00 41.47 1.28
743 744 6.347806 CCGTGCATTGCAACGGTATATAAATA 60.348 38.462 28.81 0.00 43.01 1.40
744 745 5.448438 CGTGCATTGCAACGGTATATAAAT 58.552 37.500 13.94 0.00 41.47 1.40
745 746 4.260825 CCGTGCATTGCAACGGTATATAAA 60.261 41.667 28.81 0.00 43.01 1.40
746 747 3.248841 CCGTGCATTGCAACGGTATATAA 59.751 43.478 28.81 0.00 43.01 0.98
747 748 2.803386 CCGTGCATTGCAACGGTATATA 59.197 45.455 28.81 0.41 43.01 0.86
748 749 1.601903 CCGTGCATTGCAACGGTATAT 59.398 47.619 28.81 0.00 43.01 0.86
749 750 1.010580 CCGTGCATTGCAACGGTATA 58.989 50.000 28.81 1.67 43.01 1.47
750 751 1.800032 CCGTGCATTGCAACGGTAT 59.200 52.632 28.81 0.00 43.01 2.73
751 752 2.972144 GCCGTGCATTGCAACGGTA 61.972 57.895 32.87 7.93 46.45 4.02
752 753 4.341502 GCCGTGCATTGCAACGGT 62.342 61.111 32.87 0.00 46.45 4.83
753 754 4.340019 TGCCGTGCATTGCAACGG 62.340 61.111 30.93 30.93 46.99 4.44
762 763 2.753055 TACTAGAACAATGCCGTGCA 57.247 45.000 0.00 1.01 44.86 4.57
763 764 3.194861 TGATACTAGAACAATGCCGTGC 58.805 45.455 0.00 0.00 0.00 5.34
764 765 5.991328 AATGATACTAGAACAATGCCGTG 57.009 39.130 0.00 0.00 0.00 4.94
765 766 8.677148 ATAAAATGATACTAGAACAATGCCGT 57.323 30.769 0.00 0.00 0.00 5.68
791 792 9.847224 AGTACCATAATTTCATCTTATCGGTTT 57.153 29.630 0.00 0.00 30.11 3.27
813 814 0.317479 ACGTTGGGTGCTGAGAGTAC 59.683 55.000 0.00 0.00 0.00 2.73
818 819 1.284982 CTTCGACGTTGGGTGCTGAG 61.285 60.000 2.20 0.00 0.00 3.35
851 853 4.690280 GGGGTTTCGACGTTGTTTAATCTA 59.310 41.667 1.96 0.00 0.00 1.98
859 861 2.968697 GCGGGGTTTCGACGTTGT 60.969 61.111 1.96 0.00 0.00 3.32
972 975 2.264794 GCTGTCGGAATGGACGGT 59.735 61.111 3.75 0.00 43.68 4.83
1273 1276 2.105128 GTCAGATCAGGCGACGGG 59.895 66.667 0.00 0.00 0.00 5.28
1279 1282 0.915364 AGAAAGGGGTCAGATCAGGC 59.085 55.000 0.00 0.00 0.00 4.85
1281 1284 4.006319 GTGAAAGAAAGGGGTCAGATCAG 58.994 47.826 0.00 0.00 0.00 2.90
1287 1290 1.850345 ACAGGTGAAAGAAAGGGGTCA 59.150 47.619 0.00 0.00 0.00 4.02
1288 1291 2.505405 GACAGGTGAAAGAAAGGGGTC 58.495 52.381 0.00 0.00 0.00 4.46
1289 1292 1.202770 CGACAGGTGAAAGAAAGGGGT 60.203 52.381 0.00 0.00 0.00 4.95
1290 1293 1.523758 CGACAGGTGAAAGAAAGGGG 58.476 55.000 0.00 0.00 0.00 4.79
1472 1482 3.511477 AGGTGGTTAGACTGACAGACAT 58.489 45.455 10.08 0.00 0.00 3.06
1474 1484 6.293516 CGATATAGGTGGTTAGACTGACAGAC 60.294 46.154 10.08 2.59 0.00 3.51
1481 1491 3.840991 TGGCGATATAGGTGGTTAGACT 58.159 45.455 0.00 0.00 0.00 3.24
1509 1519 1.746220 CGTTCAGGTTGTTGGGTCAAA 59.254 47.619 0.00 0.00 0.00 2.69
1532 1543 5.182001 CACCATTAAGTTTCAGACCAGGAAG 59.818 44.000 0.00 0.00 0.00 3.46
1550 1561 2.118076 CCACCACCTGCCACCATT 59.882 61.111 0.00 0.00 0.00 3.16
1569 1581 3.746492 ACAAGCCAGAAATCAACGAGTAC 59.254 43.478 0.00 0.00 0.00 2.73
1576 1588 0.881118 GCGGACAAGCCAGAAATCAA 59.119 50.000 0.00 0.00 35.94 2.57
1735 1747 4.207891 TCTGCTAAACAAGGGCTTCTAG 57.792 45.455 0.00 0.00 0.00 2.43
1760 1772 0.815615 GGGATGGGAGAATCGTGTGC 60.816 60.000 0.00 0.00 34.37 4.57
1765 1777 0.107456 CACAGGGGATGGGAGAATCG 59.893 60.000 0.00 0.00 32.10 3.34
1785 1798 5.138276 CAGGTACTTAGCCTAGGTGACATA 58.862 45.833 11.31 0.00 34.60 2.29
1869 1989 2.042686 TTCCCTCGCTTGGATTGATG 57.957 50.000 0.00 0.00 0.00 3.07
1881 2093 2.094026 TGTCACTGTGATCATTCCCTCG 60.094 50.000 14.37 0.00 0.00 4.63
1887 2099 2.071540 CGTGCTGTCACTGTGATCATT 58.928 47.619 14.37 0.00 40.99 2.57
1894 2109 0.249741 GGTTACCGTGCTGTCACTGT 60.250 55.000 0.00 0.00 42.17 3.55
1895 2110 0.949105 GGGTTACCGTGCTGTCACTG 60.949 60.000 0.00 0.00 40.99 3.66
1896 2111 1.370064 GGGTTACCGTGCTGTCACT 59.630 57.895 0.00 0.00 40.99 3.41
1897 2112 0.321298 ATGGGTTACCGTGCTGTCAC 60.321 55.000 0.00 0.00 40.75 3.67
1898 2113 0.398696 AATGGGTTACCGTGCTGTCA 59.601 50.000 0.00 0.00 40.75 3.58
1899 2114 1.467342 GAAATGGGTTACCGTGCTGTC 59.533 52.381 0.00 0.00 40.75 3.51
1908 2123 5.054390 TCTTGAAATGCGAAATGGGTTAC 57.946 39.130 0.00 0.00 0.00 2.50
1963 2178 7.831690 TGTTTGCATTATAGATTTGTACTCCCA 59.168 33.333 0.00 0.00 0.00 4.37
1991 2240 7.099120 TGTAAATCGTTAACCTCTCTTAACCC 58.901 38.462 0.00 0.00 34.39 4.11
2311 2570 2.468040 CGAAGACGACGATAATTGGAGC 59.532 50.000 0.00 0.00 42.66 4.70
2335 2594 2.185310 ATCAGGCGGTGGGAAGTGAC 62.185 60.000 0.00 0.00 0.00 3.67
2371 2630 9.746711 CATCTTTTCAGTTATTTGTCTCTTACG 57.253 33.333 0.00 0.00 0.00 3.18
2398 2657 1.538512 CACCTCCAATGTTGCTGTCAG 59.461 52.381 0.00 0.00 0.00 3.51
2511 2771 6.101150 TGGGTTCTGCTATACCAACATCTATT 59.899 38.462 0.00 0.00 36.10 1.73
2514 2774 3.780294 TGGGTTCTGCTATACCAACATCT 59.220 43.478 0.00 0.00 36.10 2.90
2573 2833 1.341531 CTGTCTCCCTGACTCGTTTGT 59.658 52.381 0.00 0.00 45.54 2.83
2577 2837 0.110678 TCACTGTCTCCCTGACTCGT 59.889 55.000 0.00 0.00 45.54 4.18
2579 2839 2.091541 CTCTCACTGTCTCCCTGACTC 58.908 57.143 0.00 0.00 45.54 3.36
2586 2846 6.040391 GCCATATATATCCTCTCACTGTCTCC 59.960 46.154 0.00 0.00 0.00 3.71
2591 2851 8.853077 TTTTTGCCATATATATCCTCTCACTG 57.147 34.615 0.00 0.00 0.00 3.66
2606 2866 7.915293 TCGAAGTATCTTTCTTTTTGCCATA 57.085 32.000 0.00 0.00 0.00 2.74
2608 2868 6.817765 ATCGAAGTATCTTTCTTTTTGCCA 57.182 33.333 0.00 0.00 0.00 4.92
2619 2879 9.939802 AACAAGGTTAGTAAATCGAAGTATCTT 57.060 29.630 0.00 0.00 0.00 2.40
2624 2884 6.766429 AGGAACAAGGTTAGTAAATCGAAGT 58.234 36.000 0.00 0.00 0.00 3.01
2625 2885 7.668525 AAGGAACAAGGTTAGTAAATCGAAG 57.331 36.000 0.00 0.00 0.00 3.79
2626 2886 9.729281 AATAAGGAACAAGGTTAGTAAATCGAA 57.271 29.630 0.00 0.00 0.00 3.71
2628 2888 9.769093 CAAATAAGGAACAAGGTTAGTAAATCG 57.231 33.333 0.00 0.00 0.00 3.34
2629 2889 9.569167 GCAAATAAGGAACAAGGTTAGTAAATC 57.431 33.333 0.00 0.00 0.00 2.17
2636 2896 6.294508 GCTTGAGCAAATAAGGAACAAGGTTA 60.295 38.462 0.00 0.00 41.59 2.85
2652 2912 3.608316 AAAAACTTGTGGCTTGAGCAA 57.392 38.095 5.24 0.00 44.36 3.91
2681 2941 1.066002 CCACCGCAGATAAGCCAAATG 59.934 52.381 0.00 0.00 0.00 2.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.