Multiple sequence alignment - TraesCS5B01G466700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G466700 chr5B 100.000 2618 0 0 1 2618 640560021 640562638 0.000000e+00 4835.0
1 TraesCS5B01G466700 chr5D 94.796 1614 47 13 669 2256 509672703 509674305 0.000000e+00 2481.0
2 TraesCS5B01G466700 chr5D 95.441 329 14 1 2291 2618 509674448 509674776 8.300000e-145 523.0
3 TraesCS5B01G466700 chr5A 94.905 1374 42 13 669 2020 637167246 637168613 0.000000e+00 2124.0
4 TraesCS5B01G466700 chr5A 92.988 328 23 0 2291 2618 637169381 637169708 1.820000e-131 479.0
5 TraesCS5B01G466700 chr5A 93.534 232 10 2 2030 2256 637169006 637169237 8.970000e-90 340.0
6 TraesCS5B01G466700 chr5A 94.828 58 3 0 2558 2615 499657509 499657566 9.980000e-15 91.6
7 TraesCS5B01G466700 chr3B 86.245 458 43 5 42 479 224272055 224272512 1.820000e-131 479.0
8 TraesCS5B01G466700 chr3B 85.808 458 43 10 42 479 223657595 223658050 1.420000e-127 466.0
9 TraesCS5B01G466700 chr2B 86.253 451 42 11 42 473 236779289 236778840 3.050000e-129 472.0
10 TraesCS5B01G466700 chr2B 86.456 443 41 8 42 465 787137563 787137121 3.950000e-128 468.0
11 TraesCS5B01G466700 chr6D 89.851 335 24 4 42 367 380999092 380999425 3.120000e-114 422.0
12 TraesCS5B01G466700 chr6B 82.328 464 53 6 42 477 506275784 506276246 2.460000e-100 375.0
13 TraesCS5B01G466700 chr7D 81.779 461 54 18 42 477 631682335 631682790 2.480000e-95 359.0
14 TraesCS5B01G466700 chrUn 85.207 338 34 9 85 411 83902687 83903019 1.500000e-87 333.0
15 TraesCS5B01G466700 chrUn 85.207 338 34 9 85 411 303054908 303055240 1.500000e-87 333.0
16 TraesCS5B01G466700 chrUn 85.044 341 35 9 85 414 343440328 343439993 1.500000e-87 333.0
17 TraesCS5B01G466700 chr4D 82.552 384 52 8 50 422 7908388 7908767 9.040000e-85 324.0
18 TraesCS5B01G466700 chr4B 90.079 252 15 4 122 363 623989642 623989391 4.200000e-83 318.0
19 TraesCS5B01G466700 chr7A 91.463 82 7 0 42 123 650357346 650357265 2.130000e-21 113.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G466700 chr5B 640560021 640562638 2617 False 4835 4835 100.0000 1 2618 1 chr5B.!!$F1 2617
1 TraesCS5B01G466700 chr5D 509672703 509674776 2073 False 1502 2481 95.1185 669 2618 2 chr5D.!!$F1 1949
2 TraesCS5B01G466700 chr5A 637167246 637169708 2462 False 981 2124 93.8090 669 2618 3 chr5A.!!$F2 1949

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
112 113 0.034186 ATTTCTTGAGGGGCATCGCA 60.034 50.0 0.0 0.0 0.0 5.1 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2072 2479 0.108615 AGATGGTTCCTTCAGCGACG 60.109 55.0 7.34 0.0 0.0 5.12 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.965986 CATATTGCATAACCTGATCATTGAAG 57.034 34.615 0.00 0.00 0.00 3.02
26 27 8.789762 CATATTGCATAACCTGATCATTGAAGA 58.210 33.333 0.00 0.00 0.00 2.87
27 28 6.441093 TTGCATAACCTGATCATTGAAGAC 57.559 37.500 0.00 0.00 0.00 3.01
28 29 4.571984 TGCATAACCTGATCATTGAAGACG 59.428 41.667 0.00 0.00 0.00 4.18
29 30 4.811024 GCATAACCTGATCATTGAAGACGA 59.189 41.667 0.00 0.00 0.00 4.20
30 31 5.050499 GCATAACCTGATCATTGAAGACGAG 60.050 44.000 0.00 0.00 0.00 4.18
31 32 4.808414 AACCTGATCATTGAAGACGAGA 57.192 40.909 0.00 0.00 0.00 4.04
32 33 4.383850 ACCTGATCATTGAAGACGAGAG 57.616 45.455 0.00 0.00 0.00 3.20
33 34 4.019858 ACCTGATCATTGAAGACGAGAGA 58.980 43.478 0.00 0.00 0.00 3.10
34 35 4.097741 ACCTGATCATTGAAGACGAGAGAG 59.902 45.833 0.00 0.00 0.00 3.20
35 36 4.337836 CCTGATCATTGAAGACGAGAGAGA 59.662 45.833 0.00 0.00 0.00 3.10
36 37 5.009911 CCTGATCATTGAAGACGAGAGAGAT 59.990 44.000 0.00 0.00 0.00 2.75
37 38 6.206438 CCTGATCATTGAAGACGAGAGAGATA 59.794 42.308 0.00 0.00 0.00 1.98
38 39 7.094248 CCTGATCATTGAAGACGAGAGAGATAT 60.094 40.741 0.00 0.00 0.00 1.63
39 40 7.592051 TGATCATTGAAGACGAGAGAGATATG 58.408 38.462 0.00 0.00 0.00 1.78
40 41 5.767269 TCATTGAAGACGAGAGAGATATGC 58.233 41.667 0.00 0.00 0.00 3.14
41 42 5.534278 TCATTGAAGACGAGAGAGATATGCT 59.466 40.000 0.00 0.00 0.00 3.79
42 43 5.431420 TTGAAGACGAGAGAGATATGCTC 57.569 43.478 0.00 0.00 44.29 4.26
43 44 4.455606 TGAAGACGAGAGAGATATGCTCA 58.544 43.478 0.00 0.00 46.45 4.26
44 45 4.274705 TGAAGACGAGAGAGATATGCTCAC 59.725 45.833 0.00 0.00 46.45 3.51
45 46 3.146066 AGACGAGAGAGATATGCTCACC 58.854 50.000 0.00 0.00 46.45 4.02
46 47 2.881513 GACGAGAGAGATATGCTCACCA 59.118 50.000 0.00 0.00 46.45 4.17
47 48 3.291584 ACGAGAGAGATATGCTCACCAA 58.708 45.455 0.00 0.00 46.45 3.67
48 49 3.067461 ACGAGAGAGATATGCTCACCAAC 59.933 47.826 0.00 0.00 46.45 3.77
49 50 3.637432 GAGAGAGATATGCTCACCAACG 58.363 50.000 0.00 0.00 46.45 4.10
50 51 2.363680 AGAGAGATATGCTCACCAACGG 59.636 50.000 0.00 0.00 46.45 4.44
51 52 1.414181 AGAGATATGCTCACCAACGGG 59.586 52.381 0.00 0.00 46.45 5.28
52 53 1.412710 GAGATATGCTCACCAACGGGA 59.587 52.381 0.00 0.00 43.38 5.14
53 54 1.139058 AGATATGCTCACCAACGGGAC 59.861 52.381 0.00 0.00 38.05 4.46
54 55 1.139058 GATATGCTCACCAACGGGACT 59.861 52.381 0.00 0.00 38.05 3.85
55 56 0.535335 TATGCTCACCAACGGGACTC 59.465 55.000 0.00 0.00 38.05 3.36
56 57 2.432628 GCTCACCAACGGGACTCG 60.433 66.667 0.00 0.00 45.88 4.18
57 58 2.261671 CTCACCAACGGGACTCGG 59.738 66.667 0.00 0.00 44.45 4.63
58 59 2.522436 TCACCAACGGGACTCGGT 60.522 61.111 0.00 0.00 44.45 4.69
59 60 2.095978 CTCACCAACGGGACTCGGTT 62.096 60.000 0.00 0.00 44.45 4.44
60 61 1.227734 CACCAACGGGACTCGGTTT 60.228 57.895 0.00 0.00 44.45 3.27
61 62 1.227734 ACCAACGGGACTCGGTTTG 60.228 57.895 0.00 0.00 44.45 2.93
62 63 1.070105 CCAACGGGACTCGGTTTGA 59.930 57.895 0.00 0.00 44.45 2.69
63 64 3.572001 ACCAACGGGACTCGGTTTGAG 62.572 57.143 0.00 0.00 43.69 3.02
74 75 4.931661 CTCGGTTTGAGCTAGGGTATAA 57.068 45.455 0.00 0.00 38.03 0.98
75 76 5.470047 CTCGGTTTGAGCTAGGGTATAAT 57.530 43.478 0.00 0.00 38.03 1.28
76 77 6.585695 CTCGGTTTGAGCTAGGGTATAATA 57.414 41.667 0.00 0.00 38.03 0.98
77 78 6.336842 TCGGTTTGAGCTAGGGTATAATAC 57.663 41.667 0.00 0.00 0.00 1.89
78 79 5.834742 TCGGTTTGAGCTAGGGTATAATACA 59.165 40.000 0.00 0.00 0.00 2.29
79 80 6.324512 TCGGTTTGAGCTAGGGTATAATACAA 59.675 38.462 0.00 0.00 0.00 2.41
80 81 6.987992 CGGTTTGAGCTAGGGTATAATACAAA 59.012 38.462 0.00 0.00 0.00 2.83
81 82 7.042254 CGGTTTGAGCTAGGGTATAATACAAAC 60.042 40.741 0.00 0.00 41.67 2.93
82 83 7.771826 GGTTTGAGCTAGGGTATAATACAAACA 59.228 37.037 16.27 0.00 43.09 2.83
83 84 9.338622 GTTTGAGCTAGGGTATAATACAAACAT 57.661 33.333 0.00 0.00 41.86 2.71
84 85 8.902540 TTGAGCTAGGGTATAATACAAACATG 57.097 34.615 0.00 0.00 0.00 3.21
85 86 8.257602 TGAGCTAGGGTATAATACAAACATGA 57.742 34.615 0.00 0.00 0.00 3.07
86 87 8.880244 TGAGCTAGGGTATAATACAAACATGAT 58.120 33.333 0.00 0.00 0.00 2.45
87 88 9.372369 GAGCTAGGGTATAATACAAACATGATC 57.628 37.037 0.00 0.00 0.00 2.92
88 89 9.105844 AGCTAGGGTATAATACAAACATGATCT 57.894 33.333 0.00 0.00 0.00 2.75
89 90 9.726438 GCTAGGGTATAATACAAACATGATCTT 57.274 33.333 0.00 0.00 0.00 2.40
92 93 9.561069 AGGGTATAATACAAACATGATCTTGAC 57.439 33.333 15.03 0.00 0.00 3.18
93 94 9.337396 GGGTATAATACAAACATGATCTTGACA 57.663 33.333 15.03 0.00 0.00 3.58
100 101 9.850628 ATACAAACATGATCTTGACATTTCTTG 57.149 29.630 15.03 8.44 0.00 3.02
101 102 7.944061 ACAAACATGATCTTGACATTTCTTGA 58.056 30.769 15.03 0.00 0.00 3.02
102 103 8.080417 ACAAACATGATCTTGACATTTCTTGAG 58.920 33.333 15.03 0.00 0.00 3.02
103 104 6.754702 ACATGATCTTGACATTTCTTGAGG 57.245 37.500 15.03 0.00 0.00 3.86
104 105 5.651139 ACATGATCTTGACATTTCTTGAGGG 59.349 40.000 15.03 0.00 0.00 4.30
105 106 4.592942 TGATCTTGACATTTCTTGAGGGG 58.407 43.478 0.00 0.00 0.00 4.79
106 107 2.795329 TCTTGACATTTCTTGAGGGGC 58.205 47.619 0.00 0.00 0.00 5.80
107 108 2.108075 TCTTGACATTTCTTGAGGGGCA 59.892 45.455 0.00 0.00 0.00 5.36
108 109 2.905415 TGACATTTCTTGAGGGGCAT 57.095 45.000 0.00 0.00 0.00 4.40
109 110 2.726821 TGACATTTCTTGAGGGGCATC 58.273 47.619 0.00 0.00 0.00 3.91
110 111 1.672881 GACATTTCTTGAGGGGCATCG 59.327 52.381 0.00 0.00 0.00 3.84
111 112 0.383231 CATTTCTTGAGGGGCATCGC 59.617 55.000 0.00 0.00 0.00 4.58
112 113 0.034186 ATTTCTTGAGGGGCATCGCA 60.034 50.000 0.00 0.00 0.00 5.10
113 114 0.251121 TTTCTTGAGGGGCATCGCAA 60.251 50.000 0.00 0.00 0.00 4.85
114 115 0.677731 TTCTTGAGGGGCATCGCAAG 60.678 55.000 14.06 14.06 42.98 4.01
128 129 3.510388 TCGCAAGATCGAGAAGTTCAT 57.490 42.857 5.50 0.00 45.01 2.57
129 130 4.632538 TCGCAAGATCGAGAAGTTCATA 57.367 40.909 5.50 0.00 45.01 2.15
130 131 4.352039 TCGCAAGATCGAGAAGTTCATAC 58.648 43.478 5.50 0.00 45.01 2.39
131 132 4.096532 TCGCAAGATCGAGAAGTTCATACT 59.903 41.667 5.50 0.00 45.01 2.12
132 133 4.205996 CGCAAGATCGAGAAGTTCATACTG 59.794 45.833 5.50 0.00 43.02 2.74
133 134 5.344066 GCAAGATCGAGAAGTTCATACTGA 58.656 41.667 5.50 0.00 34.01 3.41
134 135 5.458452 GCAAGATCGAGAAGTTCATACTGAG 59.542 44.000 5.50 0.00 34.01 3.35
135 136 5.181690 AGATCGAGAAGTTCATACTGAGC 57.818 43.478 5.50 0.00 34.01 4.26
136 137 4.887071 AGATCGAGAAGTTCATACTGAGCT 59.113 41.667 5.50 0.00 39.70 4.09
137 138 4.624336 TCGAGAAGTTCATACTGAGCTC 57.376 45.455 6.82 6.82 36.93 4.09
138 139 3.378742 TCGAGAAGTTCATACTGAGCTCC 59.621 47.826 12.15 0.00 36.93 4.70
139 140 3.129462 CGAGAAGTTCATACTGAGCTCCA 59.871 47.826 12.15 0.00 36.93 3.86
140 141 4.380973 CGAGAAGTTCATACTGAGCTCCAA 60.381 45.833 12.15 0.00 36.93 3.53
141 142 4.826556 AGAAGTTCATACTGAGCTCCAAC 58.173 43.478 12.15 4.68 36.93 3.77
142 143 4.284490 AGAAGTTCATACTGAGCTCCAACA 59.716 41.667 12.15 0.00 36.93 3.33
143 144 4.623932 AGTTCATACTGAGCTCCAACAA 57.376 40.909 12.15 0.00 32.24 2.83
144 145 4.573900 AGTTCATACTGAGCTCCAACAAG 58.426 43.478 12.15 3.67 32.24 3.16
145 146 4.284490 AGTTCATACTGAGCTCCAACAAGA 59.716 41.667 12.15 0.00 32.24 3.02
146 147 5.046014 AGTTCATACTGAGCTCCAACAAGAT 60.046 40.000 12.15 0.00 32.24 2.40
147 148 5.016051 TCATACTGAGCTCCAACAAGATC 57.984 43.478 12.15 0.00 32.29 2.75
148 149 4.713814 TCATACTGAGCTCCAACAAGATCT 59.286 41.667 12.15 0.00 32.88 2.75
149 150 5.188555 TCATACTGAGCTCCAACAAGATCTT 59.811 40.000 12.15 0.88 32.88 2.40
150 151 3.672808 ACTGAGCTCCAACAAGATCTTG 58.327 45.455 29.74 29.74 45.58 3.02
175 176 6.673154 TGAGCATCATTGACAATGTCTAAG 57.327 37.500 23.98 13.21 42.56 2.18
176 177 5.065602 TGAGCATCATTGACAATGTCTAAGC 59.934 40.000 23.98 19.92 42.56 3.09
177 178 4.034858 AGCATCATTGACAATGTCTAAGCG 59.965 41.667 23.98 9.71 39.87 4.68
178 179 4.034394 GCATCATTGACAATGTCTAAGCGA 59.966 41.667 23.98 6.28 39.87 4.93
179 180 5.735324 CATCATTGACAATGTCTAAGCGAG 58.265 41.667 23.98 0.00 39.87 5.03
180 181 4.820897 TCATTGACAATGTCTAAGCGAGT 58.179 39.130 23.98 0.00 39.87 4.18
181 182 4.864806 TCATTGACAATGTCTAAGCGAGTC 59.135 41.667 23.98 0.00 39.87 3.36
182 183 3.232213 TGACAATGTCTAAGCGAGTCC 57.768 47.619 14.97 0.00 33.15 3.85
183 184 2.826128 TGACAATGTCTAAGCGAGTCCT 59.174 45.455 14.97 0.00 33.15 3.85
184 185 4.014406 TGACAATGTCTAAGCGAGTCCTA 58.986 43.478 14.97 0.00 33.15 2.94
185 186 4.096532 TGACAATGTCTAAGCGAGTCCTAG 59.903 45.833 14.97 0.00 33.15 3.02
186 187 4.017808 ACAATGTCTAAGCGAGTCCTAGT 58.982 43.478 0.00 0.00 0.00 2.57
187 188 4.463186 ACAATGTCTAAGCGAGTCCTAGTT 59.537 41.667 0.00 0.00 0.00 2.24
188 189 4.640789 ATGTCTAAGCGAGTCCTAGTTG 57.359 45.455 0.00 0.00 0.00 3.16
189 190 3.418995 TGTCTAAGCGAGTCCTAGTTGT 58.581 45.455 0.00 0.00 0.00 3.32
190 191 3.825014 TGTCTAAGCGAGTCCTAGTTGTT 59.175 43.478 0.00 0.00 0.00 2.83
191 192 4.082895 TGTCTAAGCGAGTCCTAGTTGTTC 60.083 45.833 0.00 0.00 0.00 3.18
192 193 4.156373 GTCTAAGCGAGTCCTAGTTGTTCT 59.844 45.833 0.00 0.00 0.00 3.01
193 194 5.353678 GTCTAAGCGAGTCCTAGTTGTTCTA 59.646 44.000 0.00 0.00 0.00 2.10
194 195 6.038492 GTCTAAGCGAGTCCTAGTTGTTCTAT 59.962 42.308 0.00 0.00 0.00 1.98
195 196 4.640789 AGCGAGTCCTAGTTGTTCTATG 57.359 45.455 0.00 0.00 0.00 2.23
196 197 4.270834 AGCGAGTCCTAGTTGTTCTATGA 58.729 43.478 0.00 0.00 0.00 2.15
197 198 4.705507 AGCGAGTCCTAGTTGTTCTATGAA 59.294 41.667 0.00 0.00 0.00 2.57
198 199 5.185249 AGCGAGTCCTAGTTGTTCTATGAAA 59.815 40.000 0.00 0.00 0.00 2.69
199 200 6.043411 GCGAGTCCTAGTTGTTCTATGAAAT 58.957 40.000 0.00 0.00 0.00 2.17
200 201 6.019479 GCGAGTCCTAGTTGTTCTATGAAATG 60.019 42.308 0.00 0.00 0.00 2.32
201 202 6.019479 CGAGTCCTAGTTGTTCTATGAAATGC 60.019 42.308 0.00 0.00 0.00 3.56
202 203 6.951971 AGTCCTAGTTGTTCTATGAAATGCT 58.048 36.000 0.00 0.00 0.00 3.79
203 204 8.079211 AGTCCTAGTTGTTCTATGAAATGCTA 57.921 34.615 0.00 0.00 0.00 3.49
204 205 8.709308 AGTCCTAGTTGTTCTATGAAATGCTAT 58.291 33.333 0.00 0.00 0.00 2.97
205 206 9.331282 GTCCTAGTTGTTCTATGAAATGCTATT 57.669 33.333 0.00 0.00 0.00 1.73
206 207 9.905713 TCCTAGTTGTTCTATGAAATGCTATTT 57.094 29.630 0.00 0.00 0.00 1.40
207 208 9.941664 CCTAGTTGTTCTATGAAATGCTATTTG 57.058 33.333 0.00 0.00 0.00 2.32
208 209 9.443283 CTAGTTGTTCTATGAAATGCTATTTGC 57.557 33.333 0.00 0.00 43.25 3.68
209 210 8.059798 AGTTGTTCTATGAAATGCTATTTGCT 57.940 30.769 0.00 0.00 43.37 3.91
210 211 9.177608 AGTTGTTCTATGAAATGCTATTTGCTA 57.822 29.630 0.00 0.00 43.37 3.49
211 212 9.226345 GTTGTTCTATGAAATGCTATTTGCTAC 57.774 33.333 0.00 0.00 43.37 3.58
212 213 8.504812 TGTTCTATGAAATGCTATTTGCTACA 57.495 30.769 0.00 0.00 43.37 2.74
213 214 9.123902 TGTTCTATGAAATGCTATTTGCTACAT 57.876 29.630 0.00 0.00 43.37 2.29
214 215 9.956720 GTTCTATGAAATGCTATTTGCTACATT 57.043 29.630 0.00 0.00 43.37 2.71
216 217 9.955208 TCTATGAAATGCTATTTGCTACATTTG 57.045 29.630 4.68 0.00 41.48 2.32
217 218 9.955208 CTATGAAATGCTATTTGCTACATTTGA 57.045 29.630 4.68 0.00 41.48 2.69
219 220 8.464770 TGAAATGCTATTTGCTACATTTGAAC 57.535 30.769 4.68 0.00 41.48 3.18
220 221 7.545265 TGAAATGCTATTTGCTACATTTGAACC 59.455 33.333 4.68 0.00 41.48 3.62
221 222 5.973899 TGCTATTTGCTACATTTGAACCA 57.026 34.783 0.00 0.00 43.37 3.67
222 223 6.528537 TGCTATTTGCTACATTTGAACCAT 57.471 33.333 0.00 0.00 43.37 3.55
223 224 6.934056 TGCTATTTGCTACATTTGAACCATT 58.066 32.000 0.00 0.00 43.37 3.16
224 225 7.035004 TGCTATTTGCTACATTTGAACCATTC 58.965 34.615 0.00 0.00 43.37 2.67
225 226 6.197096 GCTATTTGCTACATTTGAACCATTCG 59.803 38.462 0.00 0.00 38.95 3.34
226 227 5.446143 TTTGCTACATTTGAACCATTCGT 57.554 34.783 0.00 0.00 0.00 3.85
227 228 4.678509 TGCTACATTTGAACCATTCGTC 57.321 40.909 0.00 0.00 0.00 4.20
228 229 3.124466 TGCTACATTTGAACCATTCGTCG 59.876 43.478 0.00 0.00 0.00 5.12
229 230 2.611974 ACATTTGAACCATTCGTCGC 57.388 45.000 0.00 0.00 0.00 5.19
230 231 1.136085 ACATTTGAACCATTCGTCGCG 60.136 47.619 0.00 0.00 0.00 5.87
231 232 1.136085 CATTTGAACCATTCGTCGCGT 60.136 47.619 5.77 0.00 0.00 6.01
232 233 0.938713 TTTGAACCATTCGTCGCGTT 59.061 45.000 5.77 0.00 0.00 4.84
233 234 0.938713 TTGAACCATTCGTCGCGTTT 59.061 45.000 5.77 0.00 0.00 3.60
234 235 1.780806 TGAACCATTCGTCGCGTTTA 58.219 45.000 5.77 0.00 0.00 2.01
235 236 2.133553 TGAACCATTCGTCGCGTTTAA 58.866 42.857 5.77 0.00 0.00 1.52
236 237 2.156117 TGAACCATTCGTCGCGTTTAAG 59.844 45.455 5.77 0.00 0.00 1.85
237 238 1.787012 ACCATTCGTCGCGTTTAAGT 58.213 45.000 5.77 0.00 0.00 2.24
238 239 1.723003 ACCATTCGTCGCGTTTAAGTC 59.277 47.619 5.77 0.00 0.00 3.01
239 240 1.060122 CCATTCGTCGCGTTTAAGTCC 59.940 52.381 5.77 0.00 0.00 3.85
240 241 0.986992 ATTCGTCGCGTTTAAGTCCG 59.013 50.000 5.77 0.00 0.00 4.79
241 242 1.003262 TTCGTCGCGTTTAAGTCCGG 61.003 55.000 5.77 0.00 0.00 5.14
242 243 1.730547 CGTCGCGTTTAAGTCCGGT 60.731 57.895 5.77 0.00 0.00 5.28
243 244 1.277495 CGTCGCGTTTAAGTCCGGTT 61.277 55.000 5.77 0.00 0.00 4.44
244 245 0.162294 GTCGCGTTTAAGTCCGGTTG 59.838 55.000 5.77 0.00 0.00 3.77
245 246 0.249405 TCGCGTTTAAGTCCGGTTGT 60.249 50.000 5.77 0.00 0.00 3.32
246 247 1.000827 TCGCGTTTAAGTCCGGTTGTA 60.001 47.619 5.77 0.00 0.00 2.41
247 248 1.791785 CGCGTTTAAGTCCGGTTGTAA 59.208 47.619 0.00 0.00 0.00 2.41
248 249 2.220593 CGCGTTTAAGTCCGGTTGTAAA 59.779 45.455 0.00 1.73 0.00 2.01
265 266 7.514573 GTTGTAAACTTTGAATTCGGTTTGT 57.485 32.000 22.56 8.20 45.32 2.83
266 267 8.617761 GTTGTAAACTTTGAATTCGGTTTGTA 57.382 30.769 22.56 14.06 45.32 2.41
267 268 9.074443 GTTGTAAACTTTGAATTCGGTTTGTAA 57.926 29.630 22.56 17.08 45.32 2.41
268 269 9.635520 TTGTAAACTTTGAATTCGGTTTGTAAA 57.364 25.926 22.56 15.28 34.40 2.01
269 270 9.074443 TGTAAACTTTGAATTCGGTTTGTAAAC 57.926 29.630 22.56 16.63 38.17 2.01
270 271 9.292846 GTAAACTTTGAATTCGGTTTGTAAACT 57.707 29.630 22.56 7.58 38.89 2.66
277 278 9.976255 TTGAATTCGGTTTGTAAACTATATTCG 57.024 29.630 7.36 2.31 38.89 3.34
278 279 9.153721 TGAATTCGGTTTGTAAACTATATTCGT 57.846 29.630 7.36 0.00 38.89 3.85
339 340 9.942850 ATATATGTGTGCTAATATGTAGTTGCA 57.057 29.630 0.00 0.00 0.00 4.08
340 341 8.675705 ATATGTGTGCTAATATGTAGTTGCAA 57.324 30.769 0.00 0.00 32.10 4.08
341 342 7.572523 ATGTGTGCTAATATGTAGTTGCAAT 57.427 32.000 0.59 0.00 32.10 3.56
342 343 7.389803 TGTGTGCTAATATGTAGTTGCAATT 57.610 32.000 0.59 0.00 32.10 2.32
343 344 7.825681 TGTGTGCTAATATGTAGTTGCAATTT 58.174 30.769 0.59 0.00 32.10 1.82
344 345 7.754475 TGTGTGCTAATATGTAGTTGCAATTTG 59.246 33.333 0.59 0.00 32.10 2.32
345 346 7.754924 GTGTGCTAATATGTAGTTGCAATTTGT 59.245 33.333 0.59 0.00 32.10 2.83
346 347 8.951243 TGTGCTAATATGTAGTTGCAATTTGTA 58.049 29.630 0.59 0.00 32.10 2.41
347 348 9.221775 GTGCTAATATGTAGTTGCAATTTGTAC 57.778 33.333 0.59 3.51 32.10 2.90
348 349 9.173021 TGCTAATATGTAGTTGCAATTTGTACT 57.827 29.630 0.59 0.00 0.00 2.73
367 368 9.862371 TTTGTACTAGAATTGCAAAGTTTGAAA 57.138 25.926 19.82 15.65 31.47 2.69
368 369 9.862371 TTGTACTAGAATTGCAAAGTTTGAAAA 57.138 25.926 19.82 12.37 30.50 2.29
369 370 9.862371 TGTACTAGAATTGCAAAGTTTGAAAAA 57.138 25.926 19.82 10.01 30.50 1.94
408 409 8.302515 TCGTTATATTTAGGGGATTAGCTAGG 57.697 38.462 0.00 0.00 0.00 3.02
409 410 7.897565 TCGTTATATTTAGGGGATTAGCTAGGT 59.102 37.037 0.00 0.00 0.00 3.08
410 411 8.196103 CGTTATATTTAGGGGATTAGCTAGGTC 58.804 40.741 0.00 0.00 0.00 3.85
411 412 8.484575 GTTATATTTAGGGGATTAGCTAGGTCC 58.515 40.741 15.45 15.45 0.00 4.46
412 413 2.599408 TAGGGGATTAGCTAGGTCCG 57.401 55.000 16.60 0.00 32.71 4.79
413 414 0.178929 AGGGGATTAGCTAGGTCCGG 60.179 60.000 16.60 0.00 32.71 5.14
414 415 1.672320 GGGATTAGCTAGGTCCGGC 59.328 63.158 16.60 2.26 32.71 6.13
415 416 1.672320 GGATTAGCTAGGTCCGGCC 59.328 63.158 10.44 0.59 37.58 6.13
416 417 1.119574 GGATTAGCTAGGTCCGGCCA 61.120 60.000 15.92 3.17 40.61 5.36
417 418 0.756903 GATTAGCTAGGTCCGGCCAA 59.243 55.000 15.92 3.08 40.61 4.52
418 419 1.140252 GATTAGCTAGGTCCGGCCAAA 59.860 52.381 15.92 4.28 40.61 3.28
419 420 0.985760 TTAGCTAGGTCCGGCCAAAA 59.014 50.000 15.92 2.13 40.61 2.44
420 421 0.251073 TAGCTAGGTCCGGCCAAAAC 59.749 55.000 15.92 0.00 40.61 2.43
421 422 1.002502 GCTAGGTCCGGCCAAAACT 60.003 57.895 15.92 0.00 40.61 2.66
422 423 0.251073 GCTAGGTCCGGCCAAAACTA 59.749 55.000 15.92 0.63 40.61 2.24
423 424 1.134189 GCTAGGTCCGGCCAAAACTAT 60.134 52.381 15.92 0.00 40.61 2.12
424 425 2.103601 GCTAGGTCCGGCCAAAACTATA 59.896 50.000 15.92 0.00 40.61 1.31
425 426 3.244457 GCTAGGTCCGGCCAAAACTATAT 60.244 47.826 15.92 0.00 40.61 0.86
426 427 3.208747 AGGTCCGGCCAAAACTATATG 57.791 47.619 15.92 0.00 40.61 1.78
427 428 1.607148 GGTCCGGCCAAAACTATATGC 59.393 52.381 2.24 0.00 37.17 3.14
428 429 2.572290 GTCCGGCCAAAACTATATGCT 58.428 47.619 2.24 0.00 0.00 3.79
429 430 2.548480 GTCCGGCCAAAACTATATGCTC 59.452 50.000 2.24 0.00 0.00 4.26
430 431 1.880027 CCGGCCAAAACTATATGCTCC 59.120 52.381 2.24 0.00 0.00 4.70
431 432 2.571212 CGGCCAAAACTATATGCTCCA 58.429 47.619 2.24 0.00 0.00 3.86
432 433 2.290641 CGGCCAAAACTATATGCTCCAC 59.709 50.000 2.24 0.00 0.00 4.02
433 434 3.555966 GGCCAAAACTATATGCTCCACT 58.444 45.455 0.00 0.00 0.00 4.00
434 435 4.714632 GGCCAAAACTATATGCTCCACTA 58.285 43.478 0.00 0.00 0.00 2.74
435 436 5.130350 GGCCAAAACTATATGCTCCACTAA 58.870 41.667 0.00 0.00 0.00 2.24
436 437 5.239525 GGCCAAAACTATATGCTCCACTAAG 59.760 44.000 0.00 0.00 0.00 2.18
437 438 5.278022 GCCAAAACTATATGCTCCACTAAGC 60.278 44.000 0.00 0.00 42.82 3.09
438 439 5.239525 CCAAAACTATATGCTCCACTAAGCC 59.760 44.000 0.00 0.00 41.77 4.35
439 440 5.896073 AAACTATATGCTCCACTAAGCCT 57.104 39.130 0.00 0.00 41.77 4.58
440 441 5.896073 AACTATATGCTCCACTAAGCCTT 57.104 39.130 0.00 0.00 41.77 4.35
441 442 5.896073 ACTATATGCTCCACTAAGCCTTT 57.104 39.130 0.00 0.00 41.77 3.11
442 443 6.253946 ACTATATGCTCCACTAAGCCTTTT 57.746 37.500 0.00 0.00 41.77 2.27
443 444 7.374975 ACTATATGCTCCACTAAGCCTTTTA 57.625 36.000 0.00 0.00 41.77 1.52
444 445 7.217906 ACTATATGCTCCACTAAGCCTTTTAC 58.782 38.462 0.00 0.00 41.77 2.01
445 446 4.576330 ATGCTCCACTAAGCCTTTTACT 57.424 40.909 0.00 0.00 41.77 2.24
446 447 3.939066 TGCTCCACTAAGCCTTTTACTC 58.061 45.455 0.00 0.00 41.77 2.59
447 448 3.271729 GCTCCACTAAGCCTTTTACTCC 58.728 50.000 0.00 0.00 36.22 3.85
448 449 3.307480 GCTCCACTAAGCCTTTTACTCCA 60.307 47.826 0.00 0.00 36.22 3.86
449 450 4.254492 CTCCACTAAGCCTTTTACTCCAC 58.746 47.826 0.00 0.00 0.00 4.02
450 451 3.908103 TCCACTAAGCCTTTTACTCCACT 59.092 43.478 0.00 0.00 0.00 4.00
451 452 5.088730 TCCACTAAGCCTTTTACTCCACTA 58.911 41.667 0.00 0.00 0.00 2.74
452 453 5.544948 TCCACTAAGCCTTTTACTCCACTAA 59.455 40.000 0.00 0.00 0.00 2.24
453 454 6.043474 TCCACTAAGCCTTTTACTCCACTAAA 59.957 38.462 0.00 0.00 0.00 1.85
454 455 6.884836 CCACTAAGCCTTTTACTCCACTAAAT 59.115 38.462 0.00 0.00 0.00 1.40
455 456 7.393515 CCACTAAGCCTTTTACTCCACTAAATT 59.606 37.037 0.00 0.00 0.00 1.82
456 457 8.793592 CACTAAGCCTTTTACTCCACTAAATTT 58.206 33.333 0.00 0.00 0.00 1.82
457 458 9.363401 ACTAAGCCTTTTACTCCACTAAATTTT 57.637 29.630 0.00 0.00 0.00 1.82
460 461 8.349568 AGCCTTTTACTCCACTAAATTTTAGG 57.650 34.615 18.05 8.68 0.00 2.69
461 462 7.396339 AGCCTTTTACTCCACTAAATTTTAGGG 59.604 37.037 18.05 14.66 0.00 3.53
462 463 7.363530 GCCTTTTACTCCACTAAATTTTAGGGG 60.364 40.741 25.56 25.56 39.46 4.79
463 464 7.891712 CCTTTTACTCCACTAAATTTTAGGGGA 59.108 37.037 29.68 29.68 44.36 4.81
464 465 8.640063 TTTTACTCCACTAAATTTTAGGGGAC 57.360 34.615 28.64 0.00 41.89 4.46
478 479 2.034104 GGGGACCGGTTAGAAATGAC 57.966 55.000 9.42 0.00 40.86 3.06
479 480 1.279846 GGGGACCGGTTAGAAATGACA 59.720 52.381 9.42 0.00 40.86 3.58
480 481 2.092592 GGGGACCGGTTAGAAATGACAT 60.093 50.000 9.42 0.00 40.86 3.06
481 482 3.617284 GGGACCGGTTAGAAATGACATT 58.383 45.455 9.42 0.00 0.00 2.71
482 483 4.384427 GGGGACCGGTTAGAAATGACATTA 60.384 45.833 9.42 0.00 40.86 1.90
483 484 5.187687 GGGACCGGTTAGAAATGACATTAA 58.812 41.667 9.42 0.00 0.00 1.40
484 485 5.826208 GGGACCGGTTAGAAATGACATTAAT 59.174 40.000 9.42 0.00 0.00 1.40
485 486 6.993902 GGGACCGGTTAGAAATGACATTAATA 59.006 38.462 9.42 0.00 0.00 0.98
486 487 7.499895 GGGACCGGTTAGAAATGACATTAATAA 59.500 37.037 9.42 1.49 0.00 1.40
487 488 8.895737 GGACCGGTTAGAAATGACATTAATAAA 58.104 33.333 9.42 0.00 0.00 1.40
488 489 9.712359 GACCGGTTAGAAATGACATTAATAAAC 57.288 33.333 9.42 5.83 0.00 2.01
489 490 9.233649 ACCGGTTAGAAATGACATTAATAAACA 57.766 29.630 0.00 0.00 0.00 2.83
496 497 9.699410 AGAAATGACATTAATAAACATGAGGGA 57.301 29.630 0.00 0.00 0.00 4.20
497 498 9.956720 GAAATGACATTAATAAACATGAGGGAG 57.043 33.333 0.00 0.00 0.00 4.30
498 499 6.942532 TGACATTAATAAACATGAGGGAGC 57.057 37.500 0.00 0.00 0.00 4.70
499 500 6.422333 TGACATTAATAAACATGAGGGAGCA 58.578 36.000 0.00 0.00 0.00 4.26
500 501 6.889177 TGACATTAATAAACATGAGGGAGCAA 59.111 34.615 0.00 0.00 0.00 3.91
501 502 7.395772 TGACATTAATAAACATGAGGGAGCAAA 59.604 33.333 0.00 0.00 0.00 3.68
502 503 7.547227 ACATTAATAAACATGAGGGAGCAAAC 58.453 34.615 0.00 0.00 0.00 2.93
503 504 7.178274 ACATTAATAAACATGAGGGAGCAAACA 59.822 33.333 0.00 0.00 0.00 2.83
504 505 7.716799 TTAATAAACATGAGGGAGCAAACAT 57.283 32.000 0.00 0.00 0.00 2.71
505 506 8.815565 TTAATAAACATGAGGGAGCAAACATA 57.184 30.769 0.00 0.00 0.00 2.29
506 507 7.902920 AATAAACATGAGGGAGCAAACATAT 57.097 32.000 0.00 0.00 0.00 1.78
507 508 8.995027 AATAAACATGAGGGAGCAAACATATA 57.005 30.769 0.00 0.00 0.00 0.86
508 509 8.995027 ATAAACATGAGGGAGCAAACATATAA 57.005 30.769 0.00 0.00 0.00 0.98
509 510 7.902920 AAACATGAGGGAGCAAACATATAAT 57.097 32.000 0.00 0.00 0.00 1.28
510 511 7.902920 AACATGAGGGAGCAAACATATAATT 57.097 32.000 0.00 0.00 0.00 1.40
511 512 7.902920 ACATGAGGGAGCAAACATATAATTT 57.097 32.000 0.00 0.00 0.00 1.82
512 513 8.310122 ACATGAGGGAGCAAACATATAATTTT 57.690 30.769 0.00 0.00 0.00 1.82
513 514 8.416329 ACATGAGGGAGCAAACATATAATTTTC 58.584 33.333 0.00 0.00 0.00 2.29
514 515 7.953005 TGAGGGAGCAAACATATAATTTTCA 57.047 32.000 0.00 0.00 0.00 2.69
515 516 7.771183 TGAGGGAGCAAACATATAATTTTCAC 58.229 34.615 0.00 0.00 0.00 3.18
516 517 7.615365 TGAGGGAGCAAACATATAATTTTCACT 59.385 33.333 0.00 0.00 0.00 3.41
517 518 8.366359 AGGGAGCAAACATATAATTTTCACTT 57.634 30.769 0.00 0.00 0.00 3.16
518 519 8.815912 AGGGAGCAAACATATAATTTTCACTTT 58.184 29.630 0.00 0.00 0.00 2.66
519 520 9.087424 GGGAGCAAACATATAATTTTCACTTTC 57.913 33.333 0.00 0.00 0.00 2.62
520 521 9.860898 GGAGCAAACATATAATTTTCACTTTCT 57.139 29.630 0.00 0.00 0.00 2.52
526 527 9.840427 AACATATAATTTTCACTTTCTCAACGG 57.160 29.630 0.00 0.00 0.00 4.44
527 528 9.226606 ACATATAATTTTCACTTTCTCAACGGA 57.773 29.630 0.00 0.00 0.00 4.69
531 532 7.930513 AATTTTCACTTTCTCAACGGAAATC 57.069 32.000 0.00 0.00 35.12 2.17
532 533 4.725556 TTCACTTTCTCAACGGAAATCG 57.274 40.909 0.00 0.00 45.88 3.34
533 534 3.985008 TCACTTTCTCAACGGAAATCGA 58.015 40.909 0.00 0.00 42.43 3.59
534 535 4.566004 TCACTTTCTCAACGGAAATCGAT 58.434 39.130 0.00 0.00 42.43 3.59
535 536 4.388773 TCACTTTCTCAACGGAAATCGATG 59.611 41.667 0.00 0.00 42.03 3.84
536 537 4.388773 CACTTTCTCAACGGAAATCGATGA 59.611 41.667 0.00 0.00 45.99 2.92
541 542 2.866156 TCAACGGAAATCGATGAGATGC 59.134 45.455 0.00 0.00 43.92 3.91
542 543 1.871080 ACGGAAATCGATGAGATGCC 58.129 50.000 0.00 0.00 40.02 4.40
543 544 1.151668 CGGAAATCGATGAGATGCCC 58.848 55.000 0.00 0.00 40.02 5.36
544 545 1.151668 GGAAATCGATGAGATGCCCG 58.848 55.000 0.00 0.00 40.02 6.13
545 546 1.151668 GAAATCGATGAGATGCCCGG 58.848 55.000 0.00 0.00 40.02 5.73
546 547 0.469917 AAATCGATGAGATGCCCGGT 59.530 50.000 0.00 0.00 40.02 5.28
547 548 0.469917 AATCGATGAGATGCCCGGTT 59.530 50.000 0.00 0.00 40.02 4.44
548 549 0.250038 ATCGATGAGATGCCCGGTTG 60.250 55.000 0.00 0.00 38.36 3.77
549 550 1.153369 CGATGAGATGCCCGGTTGT 60.153 57.895 0.00 0.00 0.00 3.32
550 551 0.744414 CGATGAGATGCCCGGTTGTT 60.744 55.000 0.00 0.00 0.00 2.83
551 552 1.017387 GATGAGATGCCCGGTTGTTC 58.983 55.000 0.00 0.00 0.00 3.18
552 553 0.744414 ATGAGATGCCCGGTTGTTCG 60.744 55.000 0.00 0.00 0.00 3.95
553 554 1.079405 GAGATGCCCGGTTGTTCGA 60.079 57.895 0.00 0.00 0.00 3.71
554 555 1.079127 AGATGCCCGGTTGTTCGAG 60.079 57.895 0.00 0.00 0.00 4.04
555 556 1.079405 GATGCCCGGTTGTTCGAGA 60.079 57.895 0.00 0.00 0.00 4.04
556 557 0.672401 GATGCCCGGTTGTTCGAGAA 60.672 55.000 0.00 0.00 0.00 2.87
557 558 0.250553 ATGCCCGGTTGTTCGAGAAA 60.251 50.000 0.00 0.00 0.00 2.52
558 559 0.464013 TGCCCGGTTGTTCGAGAAAA 60.464 50.000 0.00 0.00 0.00 2.29
559 560 0.664224 GCCCGGTTGTTCGAGAAAAA 59.336 50.000 0.00 0.00 0.00 1.94
574 575 3.980583 AAAAAGCTCGAGACACCGA 57.019 47.368 18.75 0.00 37.03 4.69
581 582 2.254471 TCGAGACACCGAGAAGTGG 58.746 57.895 0.00 0.00 42.28 4.00
582 583 1.444553 CGAGACACCGAGAAGTGGC 60.445 63.158 0.00 0.00 46.87 5.01
584 585 3.952811 GACACCGAGAAGTGGCAC 58.047 61.111 10.29 10.29 45.71 5.01
585 586 1.069090 GACACCGAGAAGTGGCACA 59.931 57.895 21.41 0.00 45.71 4.57
586 587 0.531974 GACACCGAGAAGTGGCACAA 60.532 55.000 21.41 0.00 45.71 3.33
587 588 0.107410 ACACCGAGAAGTGGCACAAA 60.107 50.000 21.41 0.00 44.16 2.83
588 589 0.307760 CACCGAGAAGTGGCACAAAC 59.692 55.000 21.41 10.27 44.16 2.93
589 590 1.157870 ACCGAGAAGTGGCACAAACG 61.158 55.000 21.41 17.73 44.16 3.60
590 591 1.569493 CGAGAAGTGGCACAAACGG 59.431 57.895 21.41 1.89 44.16 4.44
591 592 1.282875 GAGAAGTGGCACAAACGGC 59.717 57.895 21.41 2.03 44.16 5.68
592 593 2.051345 GAAGTGGCACAAACGGCG 60.051 61.111 21.41 4.80 44.16 6.46
593 594 2.826738 AAGTGGCACAAACGGCGT 60.827 55.556 21.41 6.77 44.16 5.68
594 595 1.500512 GAAGTGGCACAAACGGCGTA 61.501 55.000 21.41 0.00 44.16 4.42
595 596 0.887387 AAGTGGCACAAACGGCGTAT 60.887 50.000 21.41 0.05 44.16 3.06
596 597 0.037139 AGTGGCACAAACGGCGTATA 60.037 50.000 21.41 0.00 44.16 1.47
597 598 1.011333 GTGGCACAAACGGCGTATAT 58.989 50.000 15.20 0.00 44.16 0.86
598 599 1.399089 GTGGCACAAACGGCGTATATT 59.601 47.619 15.20 0.00 44.16 1.28
599 600 2.085320 TGGCACAAACGGCGTATATTT 58.915 42.857 15.20 0.00 31.92 1.40
600 601 2.096174 TGGCACAAACGGCGTATATTTC 59.904 45.455 15.20 3.05 31.92 2.17
601 602 2.353579 GGCACAAACGGCGTATATTTCT 59.646 45.455 15.20 0.00 0.00 2.52
602 603 3.350912 GCACAAACGGCGTATATTTCTG 58.649 45.455 15.20 2.79 0.00 3.02
603 604 3.787476 GCACAAACGGCGTATATTTCTGG 60.787 47.826 15.20 0.00 0.00 3.86
604 605 2.353579 ACAAACGGCGTATATTTCTGGC 59.646 45.455 15.20 0.00 0.00 4.85
605 606 2.612212 CAAACGGCGTATATTTCTGGCT 59.388 45.455 15.20 0.00 0.00 4.75
606 607 2.614829 ACGGCGTATATTTCTGGCTT 57.385 45.000 12.58 0.00 0.00 4.35
607 608 2.480845 ACGGCGTATATTTCTGGCTTC 58.519 47.619 12.58 0.00 0.00 3.86
608 609 1.455786 CGGCGTATATTTCTGGCTTCG 59.544 52.381 0.00 0.00 0.00 3.79
609 610 1.194772 GGCGTATATTTCTGGCTTCGC 59.805 52.381 0.00 0.00 41.32 4.70
625 626 3.204827 GCCTGACGCGCCATTGAT 61.205 61.111 5.73 0.00 0.00 2.57
626 627 3.017323 CCTGACGCGCCATTGATC 58.983 61.111 5.73 0.00 0.00 2.92
627 628 1.815003 CCTGACGCGCCATTGATCA 60.815 57.895 5.73 0.00 0.00 2.92
628 629 1.162181 CCTGACGCGCCATTGATCAT 61.162 55.000 5.73 0.00 0.00 2.45
629 630 1.501169 CTGACGCGCCATTGATCATA 58.499 50.000 5.73 0.00 0.00 2.15
630 631 1.866601 CTGACGCGCCATTGATCATAA 59.133 47.619 5.73 0.00 0.00 1.90
631 632 2.284190 TGACGCGCCATTGATCATAAA 58.716 42.857 5.73 0.00 0.00 1.40
632 633 2.031560 TGACGCGCCATTGATCATAAAC 59.968 45.455 5.73 0.00 0.00 2.01
633 634 1.003972 ACGCGCCATTGATCATAAACG 60.004 47.619 5.73 0.03 0.00 3.60
634 635 1.660052 CGCGCCATTGATCATAAACGG 60.660 52.381 0.00 0.00 0.00 4.44
635 636 1.601903 GCGCCATTGATCATAAACGGA 59.398 47.619 0.00 0.00 0.00 4.69
636 637 2.032799 GCGCCATTGATCATAAACGGAA 59.967 45.455 0.00 0.00 0.00 4.30
637 638 3.617669 CGCCATTGATCATAAACGGAAC 58.382 45.455 0.00 0.00 0.00 3.62
651 652 4.668118 GAACGAACGTGGCCGGGA 62.668 66.667 2.18 0.00 38.78 5.14
652 653 4.974989 AACGAACGTGGCCGGGAC 62.975 66.667 2.18 0.00 38.78 4.46
663 664 2.516460 CCGGGACCGAGAGACGAT 60.516 66.667 13.13 0.00 45.77 3.73
664 665 2.716244 CGGGACCGAGAGACGATG 59.284 66.667 4.40 0.00 45.77 3.84
665 666 1.818363 CGGGACCGAGAGACGATGA 60.818 63.158 4.40 0.00 45.77 2.92
666 667 1.374343 CGGGACCGAGAGACGATGAA 61.374 60.000 4.40 0.00 45.77 2.57
667 668 0.100861 GGGACCGAGAGACGATGAAC 59.899 60.000 0.00 0.00 45.77 3.18
686 687 0.747255 CCGTGGAGAGTGATCCGAAT 59.253 55.000 0.00 0.00 42.77 3.34
718 723 2.885676 CGCTGCACGCCATACCATC 61.886 63.158 0.00 0.00 34.21 3.51
719 724 2.546494 GCTGCACGCCATACCATCC 61.546 63.158 0.00 0.00 0.00 3.51
722 734 2.280797 CACGCCATACCATCCGGG 60.281 66.667 0.00 0.00 44.81 5.73
911 925 0.686789 CTCATCACCCACCAGACACA 59.313 55.000 0.00 0.00 0.00 3.72
914 928 0.110486 ATCACCCACCAGACACAACC 59.890 55.000 0.00 0.00 0.00 3.77
1317 1331 2.610859 TCCCCCAAGGAGCAGGTC 60.611 66.667 0.00 0.00 40.93 3.85
1332 1346 0.616111 AGGTCTTCGAGATGCCCACT 60.616 55.000 0.00 0.00 0.00 4.00
1894 1915 3.228188 TGTTCTTTTGGCCAGAGATGT 57.772 42.857 18.36 0.00 0.00 3.06
1900 1921 2.336945 TTGGCCAGAGATGTAGCATG 57.663 50.000 5.11 0.00 0.00 4.06
1926 1947 5.365403 TGTTTAAACCATTCAACCTAGCG 57.635 39.130 15.59 0.00 0.00 4.26
2072 2479 9.892130 ATATACTCCCTCCGATCAAAATTAATC 57.108 33.333 0.00 0.00 0.00 1.75
2073 2480 5.057149 ACTCCCTCCGATCAAAATTAATCG 58.943 41.667 9.60 9.60 43.32 3.34
2075 2482 5.054477 TCCCTCCGATCAAAATTAATCGTC 58.946 41.667 13.48 0.00 42.41 4.20
2081 2488 5.489335 CGATCAAAATTAATCGTCGCTGAA 58.511 37.500 8.75 0.00 39.83 3.02
2256 2667 6.821665 TCGTTGACTAAATTTAGGATCCAAGG 59.178 38.462 25.25 23.14 35.08 3.61
2257 2668 6.598064 CGTTGACTAAATTTAGGATCCAAGGT 59.402 38.462 25.25 5.58 35.08 3.50
2258 2669 7.120726 CGTTGACTAAATTTAGGATCCAAGGTT 59.879 37.037 25.25 3.83 35.08 3.50
2259 2670 8.459635 GTTGACTAAATTTAGGATCCAAGGTTC 58.540 37.037 25.25 12.30 35.08 3.62
2260 2671 7.116736 TGACTAAATTTAGGATCCAAGGTTCC 58.883 38.462 25.25 7.95 35.08 3.62
2261 2672 7.036863 TGACTAAATTTAGGATCCAAGGTTCCT 60.037 37.037 25.25 19.70 44.09 3.36
2262 2673 8.401955 ACTAAATTTAGGATCCAAGGTTCCTA 57.598 34.615 25.25 17.96 42.45 2.94
2263 2674 9.015146 ACTAAATTTAGGATCCAAGGTTCCTAT 57.985 33.333 25.25 12.11 42.66 2.57
2267 2678 4.989875 AGGATCCAAGGTTCCTATCATG 57.010 45.455 15.82 0.00 41.17 3.07
2268 2679 3.073650 AGGATCCAAGGTTCCTATCATGC 59.926 47.826 15.82 0.00 41.17 4.06
2270 2681 4.508047 GGATCCAAGGTTCCTATCATGCAT 60.508 45.833 6.95 0.00 32.70 3.96
2271 2682 4.090761 TCCAAGGTTCCTATCATGCATC 57.909 45.455 0.00 0.00 0.00 3.91
2272 2683 3.152341 CCAAGGTTCCTATCATGCATCC 58.848 50.000 0.00 0.00 0.00 3.51
2273 2684 3.435457 CCAAGGTTCCTATCATGCATCCA 60.435 47.826 0.00 0.00 0.00 3.41
2274 2685 4.209538 CAAGGTTCCTATCATGCATCCAA 58.790 43.478 0.00 0.00 0.00 3.53
2275 2686 4.524802 AGGTTCCTATCATGCATCCAAA 57.475 40.909 0.00 0.00 0.00 3.28
2277 2688 5.461327 AGGTTCCTATCATGCATCCAAATT 58.539 37.500 0.00 0.00 0.00 1.82
2278 2689 6.613699 AGGTTCCTATCATGCATCCAAATTA 58.386 36.000 0.00 0.00 0.00 1.40
2279 2690 7.068702 AGGTTCCTATCATGCATCCAAATTAA 58.931 34.615 0.00 0.00 0.00 1.40
2280 2691 7.014615 AGGTTCCTATCATGCATCCAAATTAAC 59.985 37.037 0.00 0.00 0.00 2.01
2282 2693 9.066892 GTTCCTATCATGCATCCAAATTAACTA 57.933 33.333 0.00 0.00 0.00 2.24
2283 2694 8.621532 TCCTATCATGCATCCAAATTAACTAC 57.378 34.615 0.00 0.00 0.00 2.73
2284 2695 8.439971 TCCTATCATGCATCCAAATTAACTACT 58.560 33.333 0.00 0.00 0.00 2.57
2285 2696 9.725019 CCTATCATGCATCCAAATTAACTACTA 57.275 33.333 0.00 0.00 0.00 1.82
2287 2698 7.801716 TCATGCATCCAAATTAACTACTACC 57.198 36.000 0.00 0.00 0.00 3.18
2288 2699 7.342581 TCATGCATCCAAATTAACTACTACCA 58.657 34.615 0.00 0.00 0.00 3.25
2289 2700 7.831690 TCATGCATCCAAATTAACTACTACCAA 59.168 33.333 0.00 0.00 0.00 3.67
2339 2859 0.942252 CATCTGATGTCGCCACATGG 59.058 55.000 0.20 0.00 43.79 3.66
2396 2917 3.565516 GCGAGTGAATGAAAGGAAAACC 58.434 45.455 0.00 0.00 0.00 3.27
2401 2922 3.895041 GTGAATGAAAGGAAAACCTGGGA 59.105 43.478 0.00 0.00 0.00 4.37
2478 2999 2.163509 CCTCTCTCGAGACCTTGTCAA 58.836 52.381 12.08 0.00 39.74 3.18
2516 3037 9.630098 AAATATCAGTAACTTGCAACAATCTTG 57.370 29.630 0.00 0.00 0.00 3.02
2520 3041 4.823989 AGTAACTTGCAACAATCTTGCTCT 59.176 37.500 0.00 0.00 45.13 4.09
2559 3080 9.582431 TGCTCACTAATACAACTACAGAAATAC 57.418 33.333 0.00 0.00 0.00 1.89
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.789762 TCTTCAATGATCAGGTTATGCAATATG 58.210 33.333 0.09 0.00 0.00 1.78
1 2 8.790718 GTCTTCAATGATCAGGTTATGCAATAT 58.209 33.333 0.09 0.00 0.00 1.28
2 3 7.041848 CGTCTTCAATGATCAGGTTATGCAATA 60.042 37.037 0.09 0.00 0.00 1.90
3 4 6.238566 CGTCTTCAATGATCAGGTTATGCAAT 60.239 38.462 0.09 0.00 0.00 3.56
4 5 5.065090 CGTCTTCAATGATCAGGTTATGCAA 59.935 40.000 0.09 0.00 0.00 4.08
5 6 4.571984 CGTCTTCAATGATCAGGTTATGCA 59.428 41.667 0.09 0.00 0.00 3.96
6 7 4.811024 TCGTCTTCAATGATCAGGTTATGC 59.189 41.667 0.09 0.00 0.00 3.14
7 8 6.276091 TCTCGTCTTCAATGATCAGGTTATG 58.724 40.000 0.09 0.00 0.00 1.90
8 9 6.322456 TCTCTCGTCTTCAATGATCAGGTTAT 59.678 38.462 0.09 0.00 0.00 1.89
9 10 5.652452 TCTCTCGTCTTCAATGATCAGGTTA 59.348 40.000 0.09 0.00 0.00 2.85
10 11 4.464244 TCTCTCGTCTTCAATGATCAGGTT 59.536 41.667 0.09 0.00 0.00 3.50
11 12 4.019858 TCTCTCGTCTTCAATGATCAGGT 58.980 43.478 0.09 0.00 0.00 4.00
12 13 4.337836 TCTCTCTCGTCTTCAATGATCAGG 59.662 45.833 0.09 0.00 0.00 3.86
13 14 5.497635 TCTCTCTCGTCTTCAATGATCAG 57.502 43.478 0.09 0.00 0.00 2.90
14 15 7.592051 CATATCTCTCTCGTCTTCAATGATCA 58.408 38.462 0.00 0.00 0.00 2.92
15 16 6.527722 GCATATCTCTCTCGTCTTCAATGATC 59.472 42.308 0.00 0.00 0.00 2.92
16 17 6.209192 AGCATATCTCTCTCGTCTTCAATGAT 59.791 38.462 0.00 0.00 0.00 2.45
17 18 5.534278 AGCATATCTCTCTCGTCTTCAATGA 59.466 40.000 0.00 0.00 0.00 2.57
18 19 5.771469 AGCATATCTCTCTCGTCTTCAATG 58.229 41.667 0.00 0.00 0.00 2.82
19 20 5.534278 TGAGCATATCTCTCTCGTCTTCAAT 59.466 40.000 0.00 0.00 42.38 2.57
20 21 4.884164 TGAGCATATCTCTCTCGTCTTCAA 59.116 41.667 0.00 0.00 42.38 2.69
21 22 4.274705 GTGAGCATATCTCTCTCGTCTTCA 59.725 45.833 0.00 0.00 42.38 3.02
22 23 4.320202 GGTGAGCATATCTCTCTCGTCTTC 60.320 50.000 0.00 0.00 42.38 2.87
23 24 3.568007 GGTGAGCATATCTCTCTCGTCTT 59.432 47.826 0.00 0.00 42.38 3.01
24 25 3.146066 GGTGAGCATATCTCTCTCGTCT 58.854 50.000 0.00 0.00 42.38 4.18
25 26 2.881513 TGGTGAGCATATCTCTCTCGTC 59.118 50.000 0.00 0.00 42.38 4.20
26 27 2.937519 TGGTGAGCATATCTCTCTCGT 58.062 47.619 0.00 0.00 42.38 4.18
27 28 3.637432 GTTGGTGAGCATATCTCTCTCG 58.363 50.000 0.00 0.00 42.38 4.04
28 29 3.551863 CCGTTGGTGAGCATATCTCTCTC 60.552 52.174 0.00 0.91 42.38 3.20
29 30 2.363680 CCGTTGGTGAGCATATCTCTCT 59.636 50.000 0.00 0.00 42.38 3.10
30 31 2.546795 CCCGTTGGTGAGCATATCTCTC 60.547 54.545 0.00 0.74 42.38 3.20
31 32 1.414181 CCCGTTGGTGAGCATATCTCT 59.586 52.381 0.00 0.00 42.38 3.10
32 33 1.412710 TCCCGTTGGTGAGCATATCTC 59.587 52.381 0.00 0.00 42.23 2.75
33 34 1.139058 GTCCCGTTGGTGAGCATATCT 59.861 52.381 0.00 0.00 0.00 1.98
34 35 1.139058 AGTCCCGTTGGTGAGCATATC 59.861 52.381 0.00 0.00 0.00 1.63
35 36 1.139058 GAGTCCCGTTGGTGAGCATAT 59.861 52.381 0.00 0.00 0.00 1.78
36 37 0.535335 GAGTCCCGTTGGTGAGCATA 59.465 55.000 0.00 0.00 0.00 3.14
37 38 1.296715 GAGTCCCGTTGGTGAGCAT 59.703 57.895 0.00 0.00 0.00 3.79
38 39 2.741092 GAGTCCCGTTGGTGAGCA 59.259 61.111 0.00 0.00 0.00 4.26
39 40 2.432628 CGAGTCCCGTTGGTGAGC 60.433 66.667 0.00 0.00 0.00 4.26
40 41 2.095978 AACCGAGTCCCGTTGGTGAG 62.096 60.000 0.00 0.00 34.08 3.51
41 42 1.688269 AAACCGAGTCCCGTTGGTGA 61.688 55.000 0.00 0.00 34.08 4.02
42 43 1.227734 AAACCGAGTCCCGTTGGTG 60.228 57.895 0.00 0.00 34.08 4.17
43 44 1.227734 CAAACCGAGTCCCGTTGGT 60.228 57.895 0.00 0.00 35.49 3.67
44 45 0.949105 CTCAAACCGAGTCCCGTTGG 60.949 60.000 0.00 0.00 36.94 3.77
45 46 1.566018 GCTCAAACCGAGTCCCGTTG 61.566 60.000 0.00 0.00 44.33 4.10
46 47 1.301479 GCTCAAACCGAGTCCCGTT 60.301 57.895 0.00 0.00 44.33 4.44
47 48 0.896940 TAGCTCAAACCGAGTCCCGT 60.897 55.000 0.00 0.00 44.33 5.28
48 49 0.179134 CTAGCTCAAACCGAGTCCCG 60.179 60.000 0.00 0.00 44.33 5.14
49 50 0.175989 CCTAGCTCAAACCGAGTCCC 59.824 60.000 0.00 0.00 44.33 4.46
50 51 0.175989 CCCTAGCTCAAACCGAGTCC 59.824 60.000 0.00 0.00 44.33 3.85
51 52 0.896226 ACCCTAGCTCAAACCGAGTC 59.104 55.000 0.00 0.00 44.33 3.36
52 53 2.226962 TACCCTAGCTCAAACCGAGT 57.773 50.000 0.00 0.00 44.33 4.18
53 54 4.931661 TTATACCCTAGCTCAAACCGAG 57.068 45.455 0.00 0.00 45.37 4.63
54 55 5.834742 TGTATTATACCCTAGCTCAAACCGA 59.165 40.000 0.00 0.00 0.00 4.69
55 56 6.092955 TGTATTATACCCTAGCTCAAACCG 57.907 41.667 0.00 0.00 0.00 4.44
56 57 7.771826 TGTTTGTATTATACCCTAGCTCAAACC 59.228 37.037 13.41 1.77 40.32 3.27
57 58 8.726870 TGTTTGTATTATACCCTAGCTCAAAC 57.273 34.615 10.58 10.58 40.95 2.93
58 59 9.337396 CATGTTTGTATTATACCCTAGCTCAAA 57.663 33.333 0.00 0.00 0.00 2.69
59 60 8.710239 TCATGTTTGTATTATACCCTAGCTCAA 58.290 33.333 0.00 0.00 0.00 3.02
60 61 8.257602 TCATGTTTGTATTATACCCTAGCTCA 57.742 34.615 0.00 0.00 0.00 4.26
61 62 9.372369 GATCATGTTTGTATTATACCCTAGCTC 57.628 37.037 0.00 0.00 0.00 4.09
62 63 9.105844 AGATCATGTTTGTATTATACCCTAGCT 57.894 33.333 0.00 0.00 0.00 3.32
63 64 9.726438 AAGATCATGTTTGTATTATACCCTAGC 57.274 33.333 0.00 0.00 0.00 3.42
66 67 9.561069 GTCAAGATCATGTTTGTATTATACCCT 57.439 33.333 0.00 0.00 0.00 4.34
67 68 9.337396 TGTCAAGATCATGTTTGTATTATACCC 57.663 33.333 0.00 0.00 0.00 3.69
74 75 9.850628 CAAGAAATGTCAAGATCATGTTTGTAT 57.149 29.630 0.00 0.00 0.00 2.29
75 76 9.065798 TCAAGAAATGTCAAGATCATGTTTGTA 57.934 29.630 0.00 0.00 0.00 2.41
76 77 7.944061 TCAAGAAATGTCAAGATCATGTTTGT 58.056 30.769 0.00 0.00 0.00 2.83
77 78 7.541091 CCTCAAGAAATGTCAAGATCATGTTTG 59.459 37.037 0.00 0.00 0.00 2.93
78 79 7.309621 CCCTCAAGAAATGTCAAGATCATGTTT 60.310 37.037 0.00 0.00 0.00 2.83
79 80 6.152323 CCCTCAAGAAATGTCAAGATCATGTT 59.848 38.462 0.00 0.00 0.00 2.71
80 81 5.651139 CCCTCAAGAAATGTCAAGATCATGT 59.349 40.000 0.00 0.00 0.00 3.21
81 82 5.067413 CCCCTCAAGAAATGTCAAGATCATG 59.933 44.000 0.00 0.00 0.00 3.07
82 83 5.198965 CCCCTCAAGAAATGTCAAGATCAT 58.801 41.667 0.00 0.00 0.00 2.45
83 84 4.592942 CCCCTCAAGAAATGTCAAGATCA 58.407 43.478 0.00 0.00 0.00 2.92
84 85 3.379688 GCCCCTCAAGAAATGTCAAGATC 59.620 47.826 0.00 0.00 0.00 2.75
85 86 3.245371 TGCCCCTCAAGAAATGTCAAGAT 60.245 43.478 0.00 0.00 0.00 2.40
86 87 2.108075 TGCCCCTCAAGAAATGTCAAGA 59.892 45.455 0.00 0.00 0.00 3.02
87 88 2.517959 TGCCCCTCAAGAAATGTCAAG 58.482 47.619 0.00 0.00 0.00 3.02
88 89 2.673775 TGCCCCTCAAGAAATGTCAA 57.326 45.000 0.00 0.00 0.00 3.18
89 90 2.726821 GATGCCCCTCAAGAAATGTCA 58.273 47.619 0.00 0.00 0.00 3.58
90 91 1.672881 CGATGCCCCTCAAGAAATGTC 59.327 52.381 0.00 0.00 0.00 3.06
91 92 1.755179 CGATGCCCCTCAAGAAATGT 58.245 50.000 0.00 0.00 0.00 2.71
92 93 0.383231 GCGATGCCCCTCAAGAAATG 59.617 55.000 0.00 0.00 0.00 2.32
93 94 0.034186 TGCGATGCCCCTCAAGAAAT 60.034 50.000 0.00 0.00 0.00 2.17
94 95 0.251121 TTGCGATGCCCCTCAAGAAA 60.251 50.000 0.00 0.00 0.00 2.52
95 96 0.677731 CTTGCGATGCCCCTCAAGAA 60.678 55.000 0.00 0.00 38.45 2.52
96 97 1.078214 CTTGCGATGCCCCTCAAGA 60.078 57.895 0.00 0.00 38.45 3.02
97 98 0.465097 ATCTTGCGATGCCCCTCAAG 60.465 55.000 0.00 0.00 37.76 3.02
98 99 0.464373 GATCTTGCGATGCCCCTCAA 60.464 55.000 0.00 0.00 0.00 3.02
99 100 1.146930 GATCTTGCGATGCCCCTCA 59.853 57.895 0.00 0.00 0.00 3.86
100 101 1.958205 CGATCTTGCGATGCCCCTC 60.958 63.158 0.00 0.00 0.00 4.30
101 102 2.109799 CGATCTTGCGATGCCCCT 59.890 61.111 0.00 0.00 0.00 4.79
102 103 1.958205 CTCGATCTTGCGATGCCCC 60.958 63.158 0.00 0.00 39.85 5.80
103 104 0.530650 TTCTCGATCTTGCGATGCCC 60.531 55.000 0.00 0.00 39.85 5.36
104 105 0.857935 CTTCTCGATCTTGCGATGCC 59.142 55.000 0.00 0.00 39.85 4.40
105 106 1.565305 ACTTCTCGATCTTGCGATGC 58.435 50.000 0.00 0.00 39.85 3.91
106 107 3.182182 TGAACTTCTCGATCTTGCGATG 58.818 45.455 0.00 0.00 39.85 3.84
107 108 3.510388 TGAACTTCTCGATCTTGCGAT 57.490 42.857 0.00 0.00 39.85 4.58
108 109 3.510388 ATGAACTTCTCGATCTTGCGA 57.490 42.857 0.00 0.00 38.74 5.10
109 110 4.205996 CAGTATGAACTTCTCGATCTTGCG 59.794 45.833 0.00 0.00 39.69 4.85
110 111 5.344066 TCAGTATGAACTTCTCGATCTTGC 58.656 41.667 0.00 0.00 45.97 4.01
124 125 8.274161 CAAGATCTTGTTGGAGCTCAGTATGAA 61.274 40.741 24.65 0.00 39.24 2.57
125 126 6.851363 CAAGATCTTGTTGGAGCTCAGTATGA 60.851 42.308 24.65 6.54 38.15 2.15
126 127 5.021033 AGATCTTGTTGGAGCTCAGTATG 57.979 43.478 17.19 0.85 37.54 2.39
127 128 5.426504 CAAGATCTTGTTGGAGCTCAGTAT 58.573 41.667 24.65 0.00 35.92 2.12
128 129 4.825422 CAAGATCTTGTTGGAGCTCAGTA 58.175 43.478 24.65 0.00 35.92 2.74
129 130 3.672808 CAAGATCTTGTTGGAGCTCAGT 58.327 45.455 24.65 0.00 35.92 3.41
141 142 6.028368 GTCAATGATGCTCAACAAGATCTTG 58.972 40.000 29.74 29.74 45.58 3.02
142 143 5.708697 TGTCAATGATGCTCAACAAGATCTT 59.291 36.000 0.88 0.88 0.00 2.40
143 144 5.250982 TGTCAATGATGCTCAACAAGATCT 58.749 37.500 0.00 0.00 0.00 2.75
144 145 5.556355 TGTCAATGATGCTCAACAAGATC 57.444 39.130 0.00 0.00 0.00 2.75
145 146 5.970317 TTGTCAATGATGCTCAACAAGAT 57.030 34.783 0.00 0.00 0.00 2.40
146 147 5.242171 ACATTGTCAATGATGCTCAACAAGA 59.758 36.000 28.28 0.00 41.46 3.02
147 148 5.466819 ACATTGTCAATGATGCTCAACAAG 58.533 37.500 28.28 1.45 41.46 3.16
148 149 5.242171 AGACATTGTCAATGATGCTCAACAA 59.758 36.000 28.28 0.78 41.46 2.83
149 150 4.763279 AGACATTGTCAATGATGCTCAACA 59.237 37.500 28.28 0.00 41.46 3.33
150 151 5.306532 AGACATTGTCAATGATGCTCAAC 57.693 39.130 28.28 10.77 41.46 3.18
151 152 6.403964 GCTTAGACATTGTCAATGATGCTCAA 60.404 38.462 28.28 13.22 41.46 3.02
152 153 5.065602 GCTTAGACATTGTCAATGATGCTCA 59.934 40.000 28.28 13.94 41.46 4.26
153 154 5.508872 GCTTAGACATTGTCAATGATGCTC 58.491 41.667 28.28 16.54 41.46 4.26
154 155 4.034858 CGCTTAGACATTGTCAATGATGCT 59.965 41.667 28.28 22.01 41.46 3.79
155 156 4.034394 TCGCTTAGACATTGTCAATGATGC 59.966 41.667 28.28 20.61 41.46 3.91
156 157 5.292834 ACTCGCTTAGACATTGTCAATGATG 59.707 40.000 28.28 14.75 41.46 3.07
157 158 5.423015 ACTCGCTTAGACATTGTCAATGAT 58.577 37.500 28.28 18.82 41.46 2.45
158 159 4.820897 ACTCGCTTAGACATTGTCAATGA 58.179 39.130 28.28 6.92 41.46 2.57
159 160 4.033358 GGACTCGCTTAGACATTGTCAATG 59.967 45.833 21.55 21.55 44.48 2.82
160 161 4.081420 AGGACTCGCTTAGACATTGTCAAT 60.081 41.667 18.57 1.87 34.60 2.57
161 162 3.258372 AGGACTCGCTTAGACATTGTCAA 59.742 43.478 18.57 9.76 34.60 3.18
162 163 2.826128 AGGACTCGCTTAGACATTGTCA 59.174 45.455 18.57 2.59 34.60 3.58
163 164 3.512033 AGGACTCGCTTAGACATTGTC 57.488 47.619 8.82 8.82 0.00 3.18
164 165 4.017808 ACTAGGACTCGCTTAGACATTGT 58.982 43.478 0.00 0.00 31.13 2.71
165 166 4.640789 ACTAGGACTCGCTTAGACATTG 57.359 45.455 0.00 0.00 31.13 2.82
166 167 4.463186 ACAACTAGGACTCGCTTAGACATT 59.537 41.667 0.00 0.00 31.13 2.71
167 168 4.017808 ACAACTAGGACTCGCTTAGACAT 58.982 43.478 0.00 0.00 31.13 3.06
168 169 3.418995 ACAACTAGGACTCGCTTAGACA 58.581 45.455 0.00 0.00 31.13 3.41
169 170 4.156373 AGAACAACTAGGACTCGCTTAGAC 59.844 45.833 0.00 0.00 31.13 2.59
170 171 4.333690 AGAACAACTAGGACTCGCTTAGA 58.666 43.478 0.00 0.00 31.13 2.10
171 172 4.705337 AGAACAACTAGGACTCGCTTAG 57.295 45.455 0.00 0.00 32.75 2.18
172 173 5.884232 TCATAGAACAACTAGGACTCGCTTA 59.116 40.000 0.00 0.00 37.05 3.09
173 174 4.705507 TCATAGAACAACTAGGACTCGCTT 59.294 41.667 0.00 0.00 37.05 4.68
174 175 4.270834 TCATAGAACAACTAGGACTCGCT 58.729 43.478 0.00 0.00 37.05 4.93
175 176 4.634184 TCATAGAACAACTAGGACTCGC 57.366 45.455 0.00 0.00 37.05 5.03
176 177 6.019479 GCATTTCATAGAACAACTAGGACTCG 60.019 42.308 0.00 0.00 40.78 4.18
177 178 7.044798 AGCATTTCATAGAACAACTAGGACTC 58.955 38.462 0.00 0.00 40.78 3.36
178 179 6.951971 AGCATTTCATAGAACAACTAGGACT 58.048 36.000 0.00 0.00 40.78 3.85
179 180 8.894768 ATAGCATTTCATAGAACAACTAGGAC 57.105 34.615 0.00 0.00 40.78 3.85
180 181 9.905713 AAATAGCATTTCATAGAACAACTAGGA 57.094 29.630 0.00 0.00 39.62 2.94
181 182 9.941664 CAAATAGCATTTCATAGAACAACTAGG 57.058 33.333 0.00 0.00 34.35 3.02
182 183 9.443283 GCAAATAGCATTTCATAGAACAACTAG 57.557 33.333 0.00 0.00 44.79 2.57
200 201 6.197096 CGAATGGTTCAAATGTAGCAAATAGC 59.803 38.462 0.00 0.00 46.19 2.97
201 202 7.250569 ACGAATGGTTCAAATGTAGCAAATAG 58.749 34.615 0.00 0.00 0.00 1.73
202 203 7.151999 ACGAATGGTTCAAATGTAGCAAATA 57.848 32.000 0.00 0.00 0.00 1.40
203 204 6.024552 ACGAATGGTTCAAATGTAGCAAAT 57.975 33.333 0.00 0.00 0.00 2.32
204 205 5.446143 ACGAATGGTTCAAATGTAGCAAA 57.554 34.783 0.00 0.00 0.00 3.68
205 206 4.377943 CGACGAATGGTTCAAATGTAGCAA 60.378 41.667 0.00 0.00 0.00 3.91
206 207 3.124466 CGACGAATGGTTCAAATGTAGCA 59.876 43.478 0.00 0.00 0.00 3.49
207 208 3.670203 CGACGAATGGTTCAAATGTAGC 58.330 45.455 0.00 0.00 0.00 3.58
208 209 3.670203 GCGACGAATGGTTCAAATGTAG 58.330 45.455 0.00 0.00 0.00 2.74
209 210 2.092995 CGCGACGAATGGTTCAAATGTA 59.907 45.455 0.00 0.00 0.00 2.29
210 211 1.136085 CGCGACGAATGGTTCAAATGT 60.136 47.619 0.00 0.00 0.00 2.71
211 212 1.136085 ACGCGACGAATGGTTCAAATG 60.136 47.619 15.93 0.00 0.00 2.32
212 213 1.153353 ACGCGACGAATGGTTCAAAT 58.847 45.000 15.93 0.00 0.00 2.32
213 214 0.938713 AACGCGACGAATGGTTCAAA 59.061 45.000 15.93 0.00 0.00 2.69
214 215 0.938713 AAACGCGACGAATGGTTCAA 59.061 45.000 15.93 0.00 0.00 2.69
215 216 1.780806 TAAACGCGACGAATGGTTCA 58.219 45.000 15.93 0.00 0.00 3.18
216 217 2.156310 ACTTAAACGCGACGAATGGTTC 59.844 45.455 15.93 0.00 0.00 3.62
217 218 2.137523 ACTTAAACGCGACGAATGGTT 58.862 42.857 15.93 0.00 0.00 3.67
218 219 1.723003 GACTTAAACGCGACGAATGGT 59.277 47.619 15.93 2.09 0.00 3.55
219 220 1.060122 GGACTTAAACGCGACGAATGG 59.940 52.381 15.93 0.00 0.00 3.16
220 221 1.266211 CGGACTTAAACGCGACGAATG 60.266 52.381 15.93 0.18 0.00 2.67
221 222 0.986992 CGGACTTAAACGCGACGAAT 59.013 50.000 15.93 0.00 0.00 3.34
222 223 1.003262 CCGGACTTAAACGCGACGAA 61.003 55.000 15.93 1.69 0.00 3.85
223 224 1.442520 CCGGACTTAAACGCGACGA 60.443 57.895 15.93 0.00 0.00 4.20
224 225 1.277495 AACCGGACTTAAACGCGACG 61.277 55.000 15.93 3.74 0.00 5.12
225 226 0.162294 CAACCGGACTTAAACGCGAC 59.838 55.000 15.93 0.00 0.00 5.19
226 227 0.249405 ACAACCGGACTTAAACGCGA 60.249 50.000 15.93 0.00 0.00 5.87
227 228 1.417372 TACAACCGGACTTAAACGCG 58.583 50.000 9.46 3.53 0.00 6.01
228 229 3.248363 AGTTTACAACCGGACTTAAACGC 59.752 43.478 9.46 0.00 38.76 4.84
229 230 5.408204 AAGTTTACAACCGGACTTAAACG 57.592 39.130 9.46 0.00 38.76 3.60
230 231 6.784176 TCAAAGTTTACAACCGGACTTAAAC 58.216 36.000 9.46 16.91 35.53 2.01
231 232 6.998968 TCAAAGTTTACAACCGGACTTAAA 57.001 33.333 9.46 5.23 32.44 1.52
232 233 6.998968 TTCAAAGTTTACAACCGGACTTAA 57.001 33.333 9.46 0.00 32.44 1.85
233 234 7.518689 CGAATTCAAAGTTTACAACCGGACTTA 60.519 37.037 9.46 0.00 32.44 2.24
234 235 6.459670 AATTCAAAGTTTACAACCGGACTT 57.540 33.333 9.46 2.66 34.03 3.01
235 236 5.277634 CGAATTCAAAGTTTACAACCGGACT 60.278 40.000 9.46 0.00 0.00 3.85
236 237 4.907582 CGAATTCAAAGTTTACAACCGGAC 59.092 41.667 9.46 0.00 0.00 4.79
237 238 4.023878 CCGAATTCAAAGTTTACAACCGGA 60.024 41.667 9.46 0.00 34.59 5.14
238 239 4.223659 CCGAATTCAAAGTTTACAACCGG 58.776 43.478 0.00 0.00 0.00 5.28
239 240 4.851010 ACCGAATTCAAAGTTTACAACCG 58.149 39.130 6.22 0.00 0.00 4.44
240 241 6.532302 ACAAACCGAATTCAAAGTTTACAACC 59.468 34.615 14.41 0.00 31.50 3.77
241 242 7.514573 ACAAACCGAATTCAAAGTTTACAAC 57.485 32.000 14.41 0.00 31.50 3.32
242 243 9.635520 TTTACAAACCGAATTCAAAGTTTACAA 57.364 25.926 14.41 10.24 31.50 2.41
243 244 9.074443 GTTTACAAACCGAATTCAAAGTTTACA 57.926 29.630 14.41 6.30 31.50 2.41
244 245 9.292846 AGTTTACAAACCGAATTCAAAGTTTAC 57.707 29.630 14.41 10.71 39.71 2.01
251 252 9.976255 CGAATATAGTTTACAAACCGAATTCAA 57.024 29.630 6.22 0.00 39.71 2.69
252 253 9.153721 ACGAATATAGTTTACAAACCGAATTCA 57.846 29.630 6.22 0.00 39.71 2.57
272 273 9.967346 TTTGAATGTTCAACCAAATTACGAATA 57.033 25.926 7.63 0.00 45.99 1.75
273 274 8.879342 TTTGAATGTTCAACCAAATTACGAAT 57.121 26.923 7.63 0.00 45.99 3.34
274 275 8.879342 ATTTGAATGTTCAACCAAATTACGAA 57.121 26.923 7.63 0.00 45.99 3.85
275 276 8.879342 AATTTGAATGTTCAACCAAATTACGA 57.121 26.923 11.92 0.00 45.99 3.43
313 314 9.942850 TGCAACTACATATTAGCACACATATAT 57.057 29.630 0.00 0.00 0.00 0.86
314 315 9.771534 TTGCAACTACATATTAGCACACATATA 57.228 29.630 0.00 0.00 0.00 0.86
315 316 8.675705 TTGCAACTACATATTAGCACACATAT 57.324 30.769 0.00 0.00 0.00 1.78
316 317 8.675705 ATTGCAACTACATATTAGCACACATA 57.324 30.769 0.00 0.00 0.00 2.29
317 318 7.572523 ATTGCAACTACATATTAGCACACAT 57.427 32.000 0.00 0.00 0.00 3.21
318 319 7.389803 AATTGCAACTACATATTAGCACACA 57.610 32.000 0.00 0.00 0.00 3.72
319 320 7.754924 ACAAATTGCAACTACATATTAGCACAC 59.245 33.333 0.00 0.00 0.00 3.82
320 321 7.825681 ACAAATTGCAACTACATATTAGCACA 58.174 30.769 0.00 0.00 0.00 4.57
321 322 9.221775 GTACAAATTGCAACTACATATTAGCAC 57.778 33.333 0.00 0.00 0.00 4.40
322 323 9.173021 AGTACAAATTGCAACTACATATTAGCA 57.827 29.630 0.00 0.00 0.00 3.49
341 342 9.862371 TTTCAAACTTTGCAATTCTAGTACAAA 57.138 25.926 0.00 0.00 0.00 2.83
342 343 9.862371 TTTTCAAACTTTGCAATTCTAGTACAA 57.138 25.926 0.00 0.00 0.00 2.41
343 344 9.862371 TTTTTCAAACTTTGCAATTCTAGTACA 57.138 25.926 0.00 0.00 0.00 2.90
382 383 8.755977 CCTAGCTAATCCCCTAAATATAACGAA 58.244 37.037 0.00 0.00 0.00 3.85
383 384 7.897565 ACCTAGCTAATCCCCTAAATATAACGA 59.102 37.037 0.00 0.00 0.00 3.85
384 385 8.075761 ACCTAGCTAATCCCCTAAATATAACG 57.924 38.462 0.00 0.00 0.00 3.18
385 386 8.484575 GGACCTAGCTAATCCCCTAAATATAAC 58.515 40.741 11.27 0.00 0.00 1.89
386 387 7.343833 CGGACCTAGCTAATCCCCTAAATATAA 59.656 40.741 15.13 0.00 0.00 0.98
387 388 6.837568 CGGACCTAGCTAATCCCCTAAATATA 59.162 42.308 15.13 0.00 0.00 0.86
388 389 5.661759 CGGACCTAGCTAATCCCCTAAATAT 59.338 44.000 15.13 0.00 0.00 1.28
389 390 5.021458 CGGACCTAGCTAATCCCCTAAATA 58.979 45.833 15.13 0.00 0.00 1.40
390 391 3.838903 CGGACCTAGCTAATCCCCTAAAT 59.161 47.826 15.13 0.00 0.00 1.40
391 392 3.236896 CGGACCTAGCTAATCCCCTAAA 58.763 50.000 15.13 0.00 0.00 1.85
392 393 2.492196 CCGGACCTAGCTAATCCCCTAA 60.492 54.545 15.13 0.00 0.00 2.69
393 394 1.076677 CCGGACCTAGCTAATCCCCTA 59.923 57.143 15.13 0.00 0.00 3.53
394 395 0.178929 CCGGACCTAGCTAATCCCCT 60.179 60.000 15.13 0.00 0.00 4.79
395 396 1.828461 GCCGGACCTAGCTAATCCCC 61.828 65.000 5.05 5.04 0.00 4.81
396 397 1.672320 GCCGGACCTAGCTAATCCC 59.328 63.158 5.05 6.53 0.00 3.85
397 398 1.119574 TGGCCGGACCTAGCTAATCC 61.120 60.000 3.83 12.06 40.22 3.01
398 399 0.756903 TTGGCCGGACCTAGCTAATC 59.243 55.000 3.83 0.00 40.22 1.75
399 400 1.209621 TTTGGCCGGACCTAGCTAAT 58.790 50.000 3.83 0.00 40.22 1.73
400 401 0.985760 TTTTGGCCGGACCTAGCTAA 59.014 50.000 3.83 0.00 40.22 3.09
401 402 0.251073 GTTTTGGCCGGACCTAGCTA 59.749 55.000 3.83 0.00 40.22 3.32
402 403 1.002502 GTTTTGGCCGGACCTAGCT 60.003 57.895 3.83 0.00 40.22 3.32
403 404 0.251073 TAGTTTTGGCCGGACCTAGC 59.749 55.000 3.83 0.00 40.22 3.42
404 405 4.315803 CATATAGTTTTGGCCGGACCTAG 58.684 47.826 3.83 0.00 40.22 3.02
405 406 3.495453 GCATATAGTTTTGGCCGGACCTA 60.495 47.826 3.83 0.00 40.22 3.08
406 407 2.748465 GCATATAGTTTTGGCCGGACCT 60.748 50.000 3.83 0.00 40.22 3.85
407 408 1.607148 GCATATAGTTTTGGCCGGACC 59.393 52.381 3.83 6.37 39.84 4.46
408 409 2.548480 GAGCATATAGTTTTGGCCGGAC 59.452 50.000 5.05 0.56 0.00 4.79
409 410 2.486548 GGAGCATATAGTTTTGGCCGGA 60.487 50.000 5.05 0.00 0.00 5.14
410 411 1.880027 GGAGCATATAGTTTTGGCCGG 59.120 52.381 0.00 0.00 0.00 6.13
411 412 2.290641 GTGGAGCATATAGTTTTGGCCG 59.709 50.000 0.00 0.00 0.00 6.13
412 413 3.555966 AGTGGAGCATATAGTTTTGGCC 58.444 45.455 0.00 0.00 0.00 5.36
413 414 5.278022 GCTTAGTGGAGCATATAGTTTTGGC 60.278 44.000 0.00 0.00 42.25 4.52
414 415 5.239525 GGCTTAGTGGAGCATATAGTTTTGG 59.760 44.000 0.00 0.00 44.49 3.28
415 416 6.058183 AGGCTTAGTGGAGCATATAGTTTTG 58.942 40.000 0.00 0.00 44.49 2.44
416 417 6.253946 AGGCTTAGTGGAGCATATAGTTTT 57.746 37.500 0.00 0.00 44.49 2.43
417 418 5.896073 AGGCTTAGTGGAGCATATAGTTT 57.104 39.130 0.00 0.00 44.49 2.66
418 419 5.896073 AAGGCTTAGTGGAGCATATAGTT 57.104 39.130 0.00 0.00 44.49 2.24
419 420 5.896073 AAAGGCTTAGTGGAGCATATAGT 57.104 39.130 0.00 0.00 44.49 2.12
420 421 7.445945 AGTAAAAGGCTTAGTGGAGCATATAG 58.554 38.462 0.00 0.00 44.49 1.31
421 422 7.374975 AGTAAAAGGCTTAGTGGAGCATATA 57.625 36.000 0.00 0.00 44.49 0.86
422 423 6.253946 AGTAAAAGGCTTAGTGGAGCATAT 57.746 37.500 0.00 0.00 44.49 1.78
423 424 5.396436 GGAGTAAAAGGCTTAGTGGAGCATA 60.396 44.000 0.00 0.00 44.49 3.14
424 425 4.518249 GAGTAAAAGGCTTAGTGGAGCAT 58.482 43.478 0.00 0.00 44.49 3.79
425 426 3.307480 GGAGTAAAAGGCTTAGTGGAGCA 60.307 47.826 0.00 0.00 44.49 4.26
426 427 3.271729 GGAGTAAAAGGCTTAGTGGAGC 58.728 50.000 0.00 0.00 41.96 4.70
427 428 4.020128 AGTGGAGTAAAAGGCTTAGTGGAG 60.020 45.833 0.00 0.00 0.00 3.86
428 429 3.908103 AGTGGAGTAAAAGGCTTAGTGGA 59.092 43.478 0.00 0.00 0.00 4.02
429 430 4.287766 AGTGGAGTAAAAGGCTTAGTGG 57.712 45.455 0.00 0.00 0.00 4.00
430 431 7.923414 ATTTAGTGGAGTAAAAGGCTTAGTG 57.077 36.000 0.00 0.00 0.00 2.74
431 432 8.935614 AAATTTAGTGGAGTAAAAGGCTTAGT 57.064 30.769 0.00 0.00 0.00 2.24
434 435 8.803235 CCTAAAATTTAGTGGAGTAAAAGGCTT 58.197 33.333 11.34 0.00 0.00 4.35
435 436 7.396339 CCCTAAAATTTAGTGGAGTAAAAGGCT 59.604 37.037 11.34 0.00 0.00 4.58
436 437 7.363530 CCCCTAAAATTTAGTGGAGTAAAAGGC 60.364 40.741 8.32 0.00 0.00 4.35
437 438 7.891712 TCCCCTAAAATTTAGTGGAGTAAAAGG 59.108 37.037 11.99 2.60 0.00 3.11
438 439 8.737175 GTCCCCTAAAATTTAGTGGAGTAAAAG 58.263 37.037 15.59 2.29 0.00 2.27
439 440 7.670979 GGTCCCCTAAAATTTAGTGGAGTAAAA 59.329 37.037 15.59 0.00 0.00 1.52
440 441 7.177184 GGTCCCCTAAAATTTAGTGGAGTAAA 58.823 38.462 15.59 0.00 0.00 2.01
441 442 6.576840 CGGTCCCCTAAAATTTAGTGGAGTAA 60.577 42.308 15.59 0.00 0.00 2.24
442 443 5.104817 CGGTCCCCTAAAATTTAGTGGAGTA 60.105 44.000 15.59 0.00 0.00 2.59
443 444 4.324022 CGGTCCCCTAAAATTTAGTGGAGT 60.324 45.833 15.59 0.00 0.00 3.85
444 445 4.196971 CGGTCCCCTAAAATTTAGTGGAG 58.803 47.826 15.59 3.77 0.00 3.86
445 446 3.054213 CCGGTCCCCTAAAATTTAGTGGA 60.054 47.826 11.99 11.99 0.00 4.02
446 447 3.284617 CCGGTCCCCTAAAATTTAGTGG 58.715 50.000 7.79 7.79 0.00 4.00
447 448 3.959293 ACCGGTCCCCTAAAATTTAGTG 58.041 45.455 0.00 0.44 0.00 2.74
448 449 4.662966 AACCGGTCCCCTAAAATTTAGT 57.337 40.909 8.04 0.00 0.00 2.24
449 450 5.993055 TCTAACCGGTCCCCTAAAATTTAG 58.007 41.667 8.04 5.80 0.00 1.85
450 451 6.385766 TTCTAACCGGTCCCCTAAAATTTA 57.614 37.500 8.04 0.00 0.00 1.40
451 452 4.932911 TCTAACCGGTCCCCTAAAATTT 57.067 40.909 8.04 0.00 0.00 1.82
452 453 4.932911 TTCTAACCGGTCCCCTAAAATT 57.067 40.909 8.04 0.00 0.00 1.82
453 454 4.932911 TTTCTAACCGGTCCCCTAAAAT 57.067 40.909 8.04 0.00 0.00 1.82
454 455 4.289148 TCATTTCTAACCGGTCCCCTAAAA 59.711 41.667 8.04 3.78 0.00 1.52
455 456 3.845398 TCATTTCTAACCGGTCCCCTAAA 59.155 43.478 8.04 5.28 0.00 1.85
456 457 3.198417 GTCATTTCTAACCGGTCCCCTAA 59.802 47.826 8.04 0.00 0.00 2.69
457 458 2.767960 GTCATTTCTAACCGGTCCCCTA 59.232 50.000 8.04 0.00 0.00 3.53
458 459 1.558294 GTCATTTCTAACCGGTCCCCT 59.442 52.381 8.04 0.00 0.00 4.79
459 460 1.279846 TGTCATTTCTAACCGGTCCCC 59.720 52.381 8.04 0.00 0.00 4.81
460 461 2.773993 TGTCATTTCTAACCGGTCCC 57.226 50.000 8.04 0.00 0.00 4.46
461 462 6.937436 ATTAATGTCATTTCTAACCGGTCC 57.063 37.500 8.04 0.00 0.00 4.46
462 463 9.712359 GTTTATTAATGTCATTTCTAACCGGTC 57.288 33.333 8.04 0.00 0.00 4.79
463 464 9.233649 TGTTTATTAATGTCATTTCTAACCGGT 57.766 29.630 0.00 0.00 0.00 5.28
470 471 9.699410 TCCCTCATGTTTATTAATGTCATTTCT 57.301 29.630 2.79 0.00 0.00 2.52
471 472 9.956720 CTCCCTCATGTTTATTAATGTCATTTC 57.043 33.333 2.79 0.00 0.00 2.17
472 473 8.416329 GCTCCCTCATGTTTATTAATGTCATTT 58.584 33.333 2.79 0.00 0.00 2.32
473 474 7.560991 TGCTCCCTCATGTTTATTAATGTCATT 59.439 33.333 3.06 3.06 0.00 2.57
474 475 7.062322 TGCTCCCTCATGTTTATTAATGTCAT 58.938 34.615 0.00 0.00 0.00 3.06
475 476 6.422333 TGCTCCCTCATGTTTATTAATGTCA 58.578 36.000 0.00 0.00 0.00 3.58
476 477 6.942532 TGCTCCCTCATGTTTATTAATGTC 57.057 37.500 0.00 0.00 0.00 3.06
477 478 7.178274 TGTTTGCTCCCTCATGTTTATTAATGT 59.822 33.333 0.00 0.00 0.00 2.71
478 479 7.546358 TGTTTGCTCCCTCATGTTTATTAATG 58.454 34.615 0.00 0.00 0.00 1.90
479 480 7.716799 TGTTTGCTCCCTCATGTTTATTAAT 57.283 32.000 0.00 0.00 0.00 1.40
480 481 7.716799 ATGTTTGCTCCCTCATGTTTATTAA 57.283 32.000 0.00 0.00 0.00 1.40
481 482 8.995027 ATATGTTTGCTCCCTCATGTTTATTA 57.005 30.769 0.00 0.00 0.00 0.98
482 483 7.902920 ATATGTTTGCTCCCTCATGTTTATT 57.097 32.000 0.00 0.00 0.00 1.40
483 484 8.995027 TTATATGTTTGCTCCCTCATGTTTAT 57.005 30.769 0.00 0.00 0.00 1.40
484 485 8.995027 ATTATATGTTTGCTCCCTCATGTTTA 57.005 30.769 0.00 0.00 0.00 2.01
485 486 7.902920 ATTATATGTTTGCTCCCTCATGTTT 57.097 32.000 0.00 0.00 0.00 2.83
486 487 7.902920 AATTATATGTTTGCTCCCTCATGTT 57.097 32.000 0.00 0.00 0.00 2.71
487 488 7.902920 AAATTATATGTTTGCTCCCTCATGT 57.097 32.000 0.00 0.00 0.00 3.21
488 489 8.415553 TGAAAATTATATGTTTGCTCCCTCATG 58.584 33.333 0.00 0.00 0.00 3.07
489 490 8.416329 GTGAAAATTATATGTTTGCTCCCTCAT 58.584 33.333 0.00 0.00 0.00 2.90
490 491 7.615365 AGTGAAAATTATATGTTTGCTCCCTCA 59.385 33.333 0.00 0.00 0.00 3.86
491 492 8.000780 AGTGAAAATTATATGTTTGCTCCCTC 57.999 34.615 0.00 0.00 0.00 4.30
492 493 7.961326 AGTGAAAATTATATGTTTGCTCCCT 57.039 32.000 0.00 0.00 0.00 4.20
493 494 9.087424 GAAAGTGAAAATTATATGTTTGCTCCC 57.913 33.333 0.00 0.00 0.00 4.30
494 495 9.860898 AGAAAGTGAAAATTATATGTTTGCTCC 57.139 29.630 0.00 0.00 0.00 4.70
500 501 9.840427 CCGTTGAGAAAGTGAAAATTATATGTT 57.160 29.630 0.00 0.00 0.00 2.71
501 502 9.226606 TCCGTTGAGAAAGTGAAAATTATATGT 57.773 29.630 0.00 0.00 0.00 2.29
505 506 9.626045 GATTTCCGTTGAGAAAGTGAAAATTAT 57.374 29.630 0.00 0.00 39.04 1.28
506 507 7.801315 CGATTTCCGTTGAGAAAGTGAAAATTA 59.199 33.333 0.00 0.00 39.04 1.40
507 508 6.636850 CGATTTCCGTTGAGAAAGTGAAAATT 59.363 34.615 0.00 0.00 39.04 1.82
508 509 6.017440 TCGATTTCCGTTGAGAAAGTGAAAAT 60.017 34.615 0.00 0.00 39.04 1.82
509 510 5.294799 TCGATTTCCGTTGAGAAAGTGAAAA 59.705 36.000 0.00 0.00 39.04 2.29
510 511 4.812091 TCGATTTCCGTTGAGAAAGTGAAA 59.188 37.500 0.00 0.00 39.04 2.69
511 512 4.373527 TCGATTTCCGTTGAGAAAGTGAA 58.626 39.130 0.00 0.00 39.04 3.18
512 513 3.985008 TCGATTTCCGTTGAGAAAGTGA 58.015 40.909 0.00 0.00 39.04 3.41
513 514 4.388773 TCATCGATTTCCGTTGAGAAAGTG 59.611 41.667 0.00 0.00 40.74 3.16
514 515 4.566004 TCATCGATTTCCGTTGAGAAAGT 58.434 39.130 0.00 0.00 40.74 2.66
520 521 2.866156 GCATCTCATCGATTTCCGTTGA 59.134 45.455 0.00 0.00 42.63 3.18
521 522 2.032549 GGCATCTCATCGATTTCCGTTG 60.033 50.000 0.00 0.00 38.84 4.10
522 523 2.213499 GGCATCTCATCGATTTCCGTT 58.787 47.619 0.00 0.00 39.75 4.44
523 524 1.541233 GGGCATCTCATCGATTTCCGT 60.541 52.381 0.00 0.00 39.75 4.69
524 525 1.151668 GGGCATCTCATCGATTTCCG 58.848 55.000 0.00 0.00 40.25 4.30
525 526 1.151668 CGGGCATCTCATCGATTTCC 58.848 55.000 0.00 0.00 0.00 3.13
526 527 1.151668 CCGGGCATCTCATCGATTTC 58.848 55.000 0.00 0.00 0.00 2.17
527 528 0.469917 ACCGGGCATCTCATCGATTT 59.530 50.000 6.32 0.00 0.00 2.17
528 529 0.469917 AACCGGGCATCTCATCGATT 59.530 50.000 6.32 0.00 0.00 3.34
529 530 0.250038 CAACCGGGCATCTCATCGAT 60.250 55.000 6.32 0.00 0.00 3.59
530 531 1.143838 CAACCGGGCATCTCATCGA 59.856 57.895 6.32 0.00 0.00 3.59
531 532 0.744414 AACAACCGGGCATCTCATCG 60.744 55.000 6.32 0.00 0.00 3.84
532 533 1.017387 GAACAACCGGGCATCTCATC 58.983 55.000 6.32 0.00 0.00 2.92
533 534 0.744414 CGAACAACCGGGCATCTCAT 60.744 55.000 6.32 0.00 0.00 2.90
534 535 1.375396 CGAACAACCGGGCATCTCA 60.375 57.895 6.32 0.00 0.00 3.27
535 536 1.079405 TCGAACAACCGGGCATCTC 60.079 57.895 6.32 0.00 0.00 2.75
536 537 1.079127 CTCGAACAACCGGGCATCT 60.079 57.895 6.32 0.00 0.00 2.90
537 538 0.672401 TTCTCGAACAACCGGGCATC 60.672 55.000 6.32 0.00 0.00 3.91
538 539 0.250553 TTTCTCGAACAACCGGGCAT 60.251 50.000 6.32 0.00 0.00 4.40
539 540 0.464013 TTTTCTCGAACAACCGGGCA 60.464 50.000 6.32 0.00 0.00 5.36
540 541 0.664224 TTTTTCTCGAACAACCGGGC 59.336 50.000 6.32 0.00 0.00 6.13
556 557 3.980583 TCGGTGTCTCGAGCTTTTT 57.019 47.368 7.81 0.00 34.82 1.94
563 564 1.863662 GCCACTTCTCGGTGTCTCGA 61.864 60.000 0.00 0.00 35.63 4.04
564 565 1.444553 GCCACTTCTCGGTGTCTCG 60.445 63.158 0.00 0.00 35.63 4.04
565 566 0.667792 GTGCCACTTCTCGGTGTCTC 60.668 60.000 0.00 0.00 35.63 3.36
566 567 1.367840 GTGCCACTTCTCGGTGTCT 59.632 57.895 0.00 0.00 35.63 3.41
567 568 0.531974 TTGTGCCACTTCTCGGTGTC 60.532 55.000 0.00 0.00 35.63 3.67
568 569 0.107410 TTTGTGCCACTTCTCGGTGT 60.107 50.000 0.00 0.00 35.63 4.16
569 570 0.307760 GTTTGTGCCACTTCTCGGTG 59.692 55.000 0.00 0.00 37.00 4.94
570 571 1.157870 CGTTTGTGCCACTTCTCGGT 61.158 55.000 0.00 0.00 0.00 4.69
571 572 1.569493 CGTTTGTGCCACTTCTCGG 59.431 57.895 0.00 0.00 0.00 4.63
572 573 1.569493 CCGTTTGTGCCACTTCTCG 59.431 57.895 0.00 0.00 0.00 4.04
573 574 1.282875 GCCGTTTGTGCCACTTCTC 59.717 57.895 0.00 0.00 0.00 2.87
574 575 2.542907 CGCCGTTTGTGCCACTTCT 61.543 57.895 0.00 0.00 0.00 2.85
575 576 1.500512 TACGCCGTTTGTGCCACTTC 61.501 55.000 0.00 0.00 0.00 3.01
576 577 0.887387 ATACGCCGTTTGTGCCACTT 60.887 50.000 0.00 0.00 0.00 3.16
577 578 0.037139 TATACGCCGTTTGTGCCACT 60.037 50.000 0.00 0.00 0.00 4.00
578 579 1.011333 ATATACGCCGTTTGTGCCAC 58.989 50.000 0.00 0.00 0.00 5.01
579 580 1.740297 AATATACGCCGTTTGTGCCA 58.260 45.000 0.00 0.00 0.00 4.92
580 581 2.353579 AGAAATATACGCCGTTTGTGCC 59.646 45.455 0.00 0.00 0.00 5.01
581 582 3.350912 CAGAAATATACGCCGTTTGTGC 58.649 45.455 0.00 0.00 0.00 4.57
582 583 3.787476 GCCAGAAATATACGCCGTTTGTG 60.787 47.826 0.00 0.00 0.00 3.33
583 584 2.353579 GCCAGAAATATACGCCGTTTGT 59.646 45.455 0.00 0.00 0.00 2.83
584 585 2.612212 AGCCAGAAATATACGCCGTTTG 59.388 45.455 0.00 0.00 0.00 2.93
585 586 2.914059 AGCCAGAAATATACGCCGTTT 58.086 42.857 0.00 0.00 0.00 3.60
586 587 2.614829 AGCCAGAAATATACGCCGTT 57.385 45.000 0.00 0.00 0.00 4.44
587 588 2.480845 GAAGCCAGAAATATACGCCGT 58.519 47.619 0.00 0.00 0.00 5.68
588 589 1.455786 CGAAGCCAGAAATATACGCCG 59.544 52.381 0.00 0.00 0.00 6.46
608 609 3.173390 GATCAATGGCGCGTCAGGC 62.173 63.158 21.72 2.20 38.69 4.85
609 610 1.162181 ATGATCAATGGCGCGTCAGG 61.162 55.000 21.72 14.50 0.00 3.86
610 611 1.501169 TATGATCAATGGCGCGTCAG 58.499 50.000 21.72 6.58 0.00 3.51
611 612 1.946745 TTATGATCAATGGCGCGTCA 58.053 45.000 19.03 19.03 0.00 4.35
612 613 2.639751 GTTTATGATCAATGGCGCGTC 58.360 47.619 2.29 2.29 0.00 5.19
613 614 1.003972 CGTTTATGATCAATGGCGCGT 60.004 47.619 8.43 0.00 0.00 6.01
614 615 1.660052 CCGTTTATGATCAATGGCGCG 60.660 52.381 0.00 0.00 0.00 6.86
615 616 1.601903 TCCGTTTATGATCAATGGCGC 59.398 47.619 0.00 0.00 31.17 6.53
616 617 3.617669 GTTCCGTTTATGATCAATGGCG 58.382 45.455 0.00 2.84 31.17 5.69
617 618 3.311322 TCGTTCCGTTTATGATCAATGGC 59.689 43.478 0.00 0.00 31.17 4.40
618 619 5.263185 GTTCGTTCCGTTTATGATCAATGG 58.737 41.667 0.00 0.00 0.00 3.16
619 620 4.955590 CGTTCGTTCCGTTTATGATCAATG 59.044 41.667 0.00 0.00 0.00 2.82
620 621 4.628333 ACGTTCGTTCCGTTTATGATCAAT 59.372 37.500 0.00 0.00 34.28 2.57
621 622 3.989167 ACGTTCGTTCCGTTTATGATCAA 59.011 39.130 0.00 0.00 34.28 2.57
622 623 3.365520 CACGTTCGTTCCGTTTATGATCA 59.634 43.478 0.00 0.00 36.17 2.92
623 624 3.241868 CCACGTTCGTTCCGTTTATGATC 60.242 47.826 0.00 0.00 36.17 2.92
624 625 2.669434 CCACGTTCGTTCCGTTTATGAT 59.331 45.455 0.00 0.00 36.17 2.45
625 626 2.060284 CCACGTTCGTTCCGTTTATGA 58.940 47.619 0.00 0.00 36.17 2.15
626 627 1.462869 GCCACGTTCGTTCCGTTTATG 60.463 52.381 0.00 0.00 36.17 1.90
627 628 0.792031 GCCACGTTCGTTCCGTTTAT 59.208 50.000 0.00 0.00 36.17 1.40
628 629 1.220817 GGCCACGTTCGTTCCGTTTA 61.221 55.000 0.00 0.00 36.17 2.01
629 630 2.536673 GGCCACGTTCGTTCCGTTT 61.537 57.895 0.00 0.00 36.17 3.60
630 631 2.968697 GGCCACGTTCGTTCCGTT 60.969 61.111 0.00 0.00 36.17 4.44
634 635 4.668118 TCCCGGCCACGTTCGTTC 62.668 66.667 2.24 0.00 38.78 3.95
635 636 4.974989 GTCCCGGCCACGTTCGTT 62.975 66.667 2.24 0.00 38.78 3.85
646 647 2.516460 ATCGTCTCTCGGTCCCGG 60.516 66.667 5.80 0.00 40.32 5.73
647 648 1.374343 TTCATCGTCTCTCGGTCCCG 61.374 60.000 0.00 0.00 40.32 5.14
648 649 0.100861 GTTCATCGTCTCTCGGTCCC 59.899 60.000 0.00 0.00 40.32 4.46
649 650 0.100861 GGTTCATCGTCTCTCGGTCC 59.899 60.000 0.00 0.00 40.32 4.46
650 651 0.248134 CGGTTCATCGTCTCTCGGTC 60.248 60.000 0.00 0.00 40.32 4.79
651 652 0.959372 ACGGTTCATCGTCTCTCGGT 60.959 55.000 0.00 0.00 39.34 4.69
652 653 0.523546 CACGGTTCATCGTCTCTCGG 60.524 60.000 0.00 0.00 41.86 4.63
653 654 0.523546 CCACGGTTCATCGTCTCTCG 60.524 60.000 0.00 0.00 41.86 4.04
654 655 0.809385 TCCACGGTTCATCGTCTCTC 59.191 55.000 0.00 0.00 41.86 3.20
655 656 0.811915 CTCCACGGTTCATCGTCTCT 59.188 55.000 0.00 0.00 41.86 3.10
656 657 0.809385 TCTCCACGGTTCATCGTCTC 59.191 55.000 0.00 0.00 41.86 3.36
657 658 0.811915 CTCTCCACGGTTCATCGTCT 59.188 55.000 0.00 0.00 41.86 4.18
658 659 0.526662 ACTCTCCACGGTTCATCGTC 59.473 55.000 0.00 0.00 41.86 4.20
659 660 0.243907 CACTCTCCACGGTTCATCGT 59.756 55.000 0.00 0.00 44.91 3.73
660 661 0.526211 TCACTCTCCACGGTTCATCG 59.474 55.000 0.00 0.00 0.00 3.84
661 662 2.482142 GGATCACTCTCCACGGTTCATC 60.482 54.545 0.00 0.00 35.24 2.92
662 663 1.482593 GGATCACTCTCCACGGTTCAT 59.517 52.381 0.00 0.00 35.24 2.57
663 664 0.895530 GGATCACTCTCCACGGTTCA 59.104 55.000 0.00 0.00 35.24 3.18
664 665 0.179134 CGGATCACTCTCCACGGTTC 60.179 60.000 0.00 0.00 34.78 3.62
665 666 0.611062 TCGGATCACTCTCCACGGTT 60.611 55.000 0.00 0.00 34.78 4.44
666 667 0.611062 TTCGGATCACTCTCCACGGT 60.611 55.000 0.00 0.00 34.78 4.83
667 668 0.747255 ATTCGGATCACTCTCCACGG 59.253 55.000 0.00 0.00 34.78 4.94
745 758 2.594303 ACCGCCACCACACACATG 60.594 61.111 0.00 0.00 0.00 3.21
771 784 0.812412 CCGATTTTGATACGGCCGGT 60.812 55.000 31.76 18.38 40.19 5.28
950 964 2.206536 GCGAGAGAGGAGATGGGGG 61.207 68.421 0.00 0.00 0.00 5.40
1317 1331 4.528674 CCAGTGGGCATCTCGAAG 57.471 61.111 0.00 0.00 0.00 3.79
1359 1373 1.377856 GAGCTTGAGGAGGTTGGGC 60.378 63.158 0.00 0.00 35.91 5.36
1848 1862 6.470557 AAATAGTGTACGCGTGTAACAAAT 57.529 33.333 24.59 12.26 35.74 2.32
1877 1898 2.305635 TGCTACATCTCTGGCCAAAAGA 59.694 45.455 17.43 17.43 0.00 2.52
1894 1915 5.124617 TGAATGGTTTAAACATCGCATGCTA 59.875 36.000 19.57 4.95 0.00 3.49
1900 1921 4.805219 AGGTTGAATGGTTTAAACATCGC 58.195 39.130 19.57 10.64 0.00 4.58
2040 2446 4.640647 TGATCGGAGGGAGTATATGAATCG 59.359 45.833 0.00 0.00 0.00 3.34
2041 2447 6.531503 TTGATCGGAGGGAGTATATGAATC 57.468 41.667 0.00 0.00 0.00 2.52
2072 2479 0.108615 AGATGGTTCCTTCAGCGACG 60.109 55.000 7.34 0.00 0.00 5.12
2073 2480 2.100605 AAGATGGTTCCTTCAGCGAC 57.899 50.000 7.34 0.00 0.00 5.19
2075 2482 4.635765 TCAATAAAGATGGTTCCTTCAGCG 59.364 41.667 7.34 0.00 0.00 5.18
2081 2488 7.234355 AGTCAACTTCAATAAAGATGGTTCCT 58.766 34.615 0.00 0.00 38.09 3.36
2115 2522 2.102109 TTTCGTAGCAAGGCACGGGA 62.102 55.000 0.00 2.00 35.24 5.14
2188 2595 3.840437 CCAGTGGGTGTGTGGTTG 58.160 61.111 0.00 0.00 0.00 3.77
2256 2667 7.945134 AGTTAATTTGGATGCATGATAGGAAC 58.055 34.615 2.46 0.34 0.00 3.62
2257 2668 9.066892 GTAGTTAATTTGGATGCATGATAGGAA 57.933 33.333 2.46 0.00 0.00 3.36
2258 2669 8.439971 AGTAGTTAATTTGGATGCATGATAGGA 58.560 33.333 2.46 0.00 0.00 2.94
2259 2670 8.627208 AGTAGTTAATTTGGATGCATGATAGG 57.373 34.615 2.46 0.00 0.00 2.57
2261 2672 9.502091 GGTAGTAGTTAATTTGGATGCATGATA 57.498 33.333 2.46 0.00 0.00 2.15
2262 2673 7.998383 TGGTAGTAGTTAATTTGGATGCATGAT 59.002 33.333 2.46 0.00 0.00 2.45
2263 2674 7.342581 TGGTAGTAGTTAATTTGGATGCATGA 58.657 34.615 2.46 0.00 0.00 3.07
2282 2693 9.747898 CTGATCTCTACTCCTATAATTGGTAGT 57.252 37.037 0.00 0.00 33.69 2.73
2283 2694 9.967451 TCTGATCTCTACTCCTATAATTGGTAG 57.033 37.037 0.00 0.00 33.37 3.18
2285 2696 9.836179 ATTCTGATCTCTACTCCTATAATTGGT 57.164 33.333 0.00 0.00 0.00 3.67
2339 2859 7.887996 TTTCTGGCAATTTTGATGATGTTAC 57.112 32.000 0.00 0.00 0.00 2.50
2375 2896 3.565516 GGTTTTCCTTTCATTCACTCGC 58.434 45.455 0.00 0.00 36.94 5.03
2396 2917 7.938140 TGTTCTTTCTTATTTATGGTCCCAG 57.062 36.000 0.00 0.00 0.00 4.45
2478 2999 7.940850 AGTTACTGATATTTGTGTTGTTTGCT 58.059 30.769 0.00 0.00 0.00 3.91
2516 3037 0.179145 GCAACCATCATGTGCAGAGC 60.179 55.000 0.68 0.00 0.00 4.09
2520 3041 0.883153 GTGAGCAACCATCATGTGCA 59.117 50.000 7.84 0.00 0.00 4.57
2593 3114 5.411781 CGTGGTATTAGATATCCTTCTGCC 58.588 45.833 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.