>input_sequence_73961
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-----------------------------------------------------ATGGCCATGGCCACGCAAGCCTCGGCG
GCGACGCGCCACCTGATCACCGCGGCCTGGTCGCCCTCCGCCAAGCCCCGCCCCGCCACCCTCGCCATGCCATCCTCCGC
CCGCGGCCCGGCCCCGCTCTGCGCCGCGGCCTCGGACACCCCCGCCCCAGCGGCGCCGCCGGCGGAGCCCGCCCCCGCGG
GCTTCGTGCCGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCC
CAGGTCGAGGAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTCTTCGAGATGCCCACTGGCGGCGCCGCCAT
CATGCGCGAGGGGCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGT
ACAAGATCGCCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCG
GAGAAGGTCAACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAA
GTTCACCGGCAAGAACTCCTTCGACATCTAA-------------------------------------------------
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>chr5B_1_TraesCS5B01G466700
CATATTGCATAACCTGATCATTGAAGACGAGAGAGATATGCTCACCAACGGGACTCGGTTTGAGCTAGGGTATAATACAA
ACATGATCTTGACATTTCTTGAGGGGCATCGCAAGATCGAGAAGTTCATACTGAGCTCCAACAAGATCTTGTTGAGCATC
ATTGACAATGTCTAAGCGAGTCCTAGTTGTTCTATGAAATGCTATTTGCTACATTTGAACCATTCGTCGCGTTTAAGTCC
GGTTGTAAACTTTGAATTCGGTTTGTAAACTATATTCGTAATTTGGTTGAACATTCAAATTTATGTTTAGTTTATATATG
TGTGCTAATATGTAGTTGCAATTTGTACTAGAATTGCAAAGTTTGAAAAAACAAAAAATTATTTCGTTATATTTAGGGGA
TTAGCTAGGTCCGGCCAAAACTATATGCTCCACTAAGCCTTTTACTCCACTAAATTTTAGGGGACCGGTTAGAAATGACA
TTAATAAACATGAGGGAGCAAACATATAATTTTCACTTTCTCAACGGAAATCGATGAGATGCCCGGTTGTTCGAGAAAAA
AGCTCGAGACACCGAGAAGTGGCACAAACGGCGTATATTTCTGGCTTCGCCTGACGCGCCATTGATCATAAACGGAACGA
ACGTGGCCGGGACCGAGAGACGATGAACCGTGGAGAGTGATCCGAAT----ATCGTCGCGTGGCCGCTGCACGCCATACC
ATCC-------GGGCCCGGCCGTGCGCATACC-TGCACATGTGTGTGGTGGCGGTGCGGAGACACCGGCCGTATCAAAAT
CGGCACTCCCCATTGGCCGGCCTCATATCGCCATATCACCTTATCCACTCCCCC-ACCCCCTCCACCCCAAGCCCCCGTA
CCTCTTAGCTCAGCCATCTCTCCTACTCATCACCCACCAGACACAACCCCATCTCCCGCGCGCGCGTGTGGCCTCGGCTC
CTCCCCCCATCTCCTCTCTCGCCAAGAACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCCTCGGCG
GCGACGCGCCACCTGATCACCGCGGCCTGGTCGCCCTCCGCCAAGCCCCGCCCCGCCACCCTCGCCATGCCATCCTCCGC
CCGCGGCCCGGCCCCGCTCTGCGCCGCGGCCTCGGACACCCCCGCCCCAGCGGCGCCGCCGGCGGAGCCCGCCCCCGCGG
GCTTCGTGCCGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCC
CAGGTCGAGGAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTCTTCGAGATGCCCACTGGCGGCGCCGCCAT
CATGCGCGAGGGGCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGT
ACAAGATCGCCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCG
GAGAAGGTCAACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAA
GTTCACCGGCAAGAACTCCTTCGACATCTAATCTCGTACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTAT
TGGCGGGTGGCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGATGGATTCGATCGGTGATAATGATG
CATCAGGTTATATGTACATGGTAATTTGATGATGATACTGCTGTATGTTAACGTTGTTCATATGCATGATCGGCTTCTTT
TTATGTTGATGATGAGTAGTAA----TTTGTTACACGCGTACACTA---TTTTTTGTTCTTTTGGCCAGAGATGTAGCAT
GCGATGTTTAAACCATTCAACCTAGCGCA--TAAACACGGTAACCCGCAGCATGTGTGGGCAACGCCTTCTCTACGTATT
GTTTTTGTGAAAGTAATTACTGAAGATAAGACTTATGCTAAATTAA----------------------------------
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---------------------TTTAC--------ATAATTGGTTACGA-TTCATATACTCCCTCCGATCAAAATTAATCG
TCGCTGAAGGAACCATCTTTATTGAAGTTGACTAGTAAGTTTCCCGTGCCTTGCTACGAAAGATAAAACATGTCTAGAAA
TATATTGCAAAATTGATTTTATTTTTTGAACCCTCAACCACACACCCACTGGTTTCTT----ATAAACATGTATAGAAAC
ATCGTTGACTAAATTTAGGATCCAAGGTTCCTATCATGCATCCAAATTAACTACTACCAA--------------------
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---------TTATAGGAGTAGAGATCAGAATTGACTAAGCATCTGATGTCGCCACATGGTAACATCATCAAAATTGCCAG
AAAAAAG-TAAACTCGCGAGTGAATGAAAGGAAAACCTGGGACCATAAATAAGAAAGAACAAAGGTAGACCATAAATACA
CGGCTTCATACAACAATTCCTCTCTCGAGACCTTGTCAAGCAAACAACACAAATATCAGTAACTTGCAACAATCTTGCTC
TGCACATGATGGTTGCTCACTAATACAACTACAGAAATACAAGTCATGCCAAATCATTTTAATAAGCTATTATGGCAGAA
GGATATCTAATACCACGG
>chr5D_669
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----------------------------CGTGGAGAGTGATCCGAACATCGATCGTCGCGTGGCCGCTGCATGCCATGTC
ATTGGCATCCGGGACCCGGCCGTGCATCTGCTTTGCATGTGTGTGTGGTGGCGGTGCGGAGAGCCCGGCCGTATCAAAAT
CGGCATTCCCCATTGGCCGGCCTCATATCGCCATATCACCTTATCCACTCCCCCCACCCCCTCCA-CCCAAGCCCCCGTA
CCTCTTAGCTCAGCCATCTCTCCTACTCATCACCCACCAGACACCACTCCATCTCCCGCGCGCGCGTGTGGCCTCCGCTC
CTCTCCCCATCTCCTCTCTCGCCAAGGACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCCTCGGCG
GCGACGCGCCACCTGATCACCGCGGCCTGGTCGCCATCCGCCAAGCCCCGCCCCGCCACCCTCGGCATGC---CCTCCGC
CCGTGGCCCGGCCCCGCTCTGCGCCGCGGCCCCGGACACCCCCGCCCCCGCCGCGCCGCCGGCGGAGCCCGCCCCCGCGG
GCTTCGTGCCGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTCCTCCGCAAGGCC
CAGGTCGAGGAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTGTTCGAGATGCCCACCGGCGGCGCCGCCAT
CATGCGCGAGGGCCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGT
ACAAGATCGCCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCG
GAGAAGGTCAACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAA
GTTCACCGGCAAGAACTCCTTCGACATCTAATCTCGTACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTAT
TGGCGGGTGGCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGATGGATTCGATCGGTGATAATGATG
CATCAGGTTATATGTACATGGTAATTTGATGATGATACTGCTGTATGTTAACGTTGTTCATATGCATGATCGGCTTCTTT
TTATGTTGATGATGAGTAGTATTTTGTTTGTTACACGCGTACACGC---TTTTTTGTCGTTTTGGCCAGAGATGAAGCAT
ACGATGTTTAAACCATTCAACCTAGCACA--TAAGCACGGTAACCC-------GTGTGGGCAACGCCTTCTCTACGTATT
GTTTTTGTGAAAGTAATTACTGAAGATAAGATTTATGCTAAATCAG----------------------------------
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---------------------TTTACGTATCTGTATAATTGGTTATAATTTCATATACTCCCTCCGATCAAAATTAATTC
TGGCTGAGGGAACCATCTTTGTTGAAGTTGACTAGTAAGTTGCCCGTGCCTTGCTACGAAAGATAAAACATGTCTAGAAA
TATATTGCAAAATTGATTTTATTTTTTGAACCCTGAACCACACACCCACTGGTTTCTT----ATAAACATGTATAGAAAC
ATCGTTGACTAAATTTAGGATCCAAGCAGAAATACATTTAGGATTCTAGCACGAGGAATCGAGGAAATGGTTGAATGTGG
TTTGTTCTACTGGCAGGTTTTCTGAAAACCAAAAAGAAAAGCTCATAGAAATGCAGAGGCAAACACACCATCACGACCAA
CTGAA-TTTTTATAGGAGTAGAGATCAGAATTGACTAAGCATCTGATGTAGCCACATGATAACATCATCAAAATTGCCAG
AAAAAAAATAAACTCACGAGTGAATGAAAGGAAAACTTGGGTCCATAAATAAGAAAGAACAAAGGTAGACCATAAATACA
CGGCTTCATACAACAATTCCTCTCTCGAGACCTTGTCGGGCAAACAACACAAATATCAGTAACTTGCAACAATCTTACTC
GGCACATGATGGTTGCTCACTAATACAACTACGGAAATATAAGTCATACCAAATCATTTTAATAAGCTATTATTGCAGAA
GGATATCTAATACCACGG
>chr5A_669
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----------------------------CGTGGAGAGTGATCCGAACATCGATCGTCGCGTGGCCGCTGCATGCCATGTC
ATTGGCATCCGGGACCCGGCCGTGCGTCTGCTTTGCATATGTGTGTGGCGGCGGTGCGGAGACCCCGGCCGTATCAAAAT
CGGCACTCCCCATTGGCCGGCCTCATATCGCCATATCACCTTATCCACTCCCCTCACCCTCTCCACCCCAAGCCCCCGTA
CCTCTTAGCTTAGC----TCTCCTGCTCATCACCCACCAGACACCACTCCATCTCCCGCGCGCGCGTGTGGCCTCCGCTC
CTCTCCCCATCTCCTCTCTCGCCAAGAACCACCGAGCTTGGAGCGCCACCGCCATGGCCATGGCCACGCAAGCCTCGGCG
GCGACGCGCCACCTCATCACCGCGGCCTGGTCGCCCTCCGCCAAGCCCCGCCCCGCCACCCTCGCCATGCCATCCTCCGC
CCGCGGCCCGGCCCCGCTCTGCGCCGCGGCCCCGGACACCCCCGCCCCCGCCGCGCCGCCGGCGGAGCCCGCGCCCGCGG
GCTTCGTGCCGCCGCAGCTGGACCCGTCCACCCCGTCCCCGATCTTCGGCGGCAGCACGGGCGGCCTGCTCCGCAAGGCC
CAGGTCGAGGAGTTCTACGTCATCACCTGGACCTCCCCCAAGGAGCAGGTGTTCGAGATGCCCACCGGCGGCGCCGCCAT
CATGCGCGAGGGCCCCAACCTCCTCAAGCTCGCCCGCAAGGAGCAGTGCCTCGCCCTCGGCAACCGCCTCCGCTCCAAGT
ACAAGATCGCCTACCAGTTCTACCGCGTCTTCCCCAACGGCGAGGTGCAGTACCTCCACCCCAAGGACGGCGTCTACCCG
GAGAAGGTCAACGCCGGCAGGCAGGGCGTGGGGCAGAACTTCCGCAGCATCGGCAAGAACGTCAGCCCCATCGAGGTCAA
GTTCACCGGCAAGAACTCCTTCGACATCTAATCTCGTACGTCGTATATGCGTACGTGCTAGTTCATCGACCGGTAGTTAT
TGGCGGGTGGCGATGATGATGGACGTCCTGTAATTTTAATTGTCGAGTTTGAATGCTGGATTCGATCGGTGATAATGATG
CATCAGGTTATATGTACATGGTAATTTGATGACGATACTGCTGTATGTTAACGTTGTTCATATGCATGATCGGCTTCTTT
TCATGTTGATGATGAGTGGTATTTTGTTTGTTACACGTCTACACTATTTTTTTTTGTCCTTTTGGCCAGAGATGAAACAT
ACGAG--TTAAACGATTCAACCAAGCACATATAAACACGGTAACCCGCAGCATGTGTGGGAAACGCCTTCTCTACGTATT
GTTTTTGTGAAAGTAATTATTGAAGATAAGATTTATGCTAAACAGTTTTGCTAAAGCATATCTAGATGTGTCATAAGTAT
TGCACATCTAAGTCATATGTTAGGCTGGTCACAATGGGGAGGAATTTAGGAGTAACATCACACACTCCAATACAACTTTG
CTTATGTGGCACATATTTAATGAAGAGAAAGGTGCTTGTGGTAACTAGCTAAGTTACCGGAACATCACACACTTCAAGAA
ACAATGAGTCTAGAACCTAATAAATACATCGTTGCATGACACTACATAGATGTTCCTACCCACTATGGAGGTAGTAACAT
AGTCTAGGGAAGTGTGTAAGTTACTAGCTTATGTTCTTGCCCATTGTGACCAGCCTTATTGATTTTACATTGAGATTCGC
GTGTCATGTGTGCTAAATTAATTTACGTATATGTATAATTGGTTATAATTTCATATACTCCCTCTGATCAAAATTAATTC
TGGCTGAGGGAACCATCTTTATTGAAGTTGACTAGTAAGTTGCCCGTGCCTTGCTACAAAAGATAAAACATGTCTAGAAA
TATATTGCAAAATTGATTTTATTTTTTGAACCCTGAACCACACACCCACTGGTTTCTTAATTATAAACATGTATAGAAAC
ATCGTTGACTAAATTTAGGATCCAAGCAGAAATATATTTAGAATTCTAGCATGAGGAATCGAGGAAATGGTTGAATGTGG
TTTGTTCTATTGGCTGGTTATCTGAAAACCCAAAATAAAAGCTCATGGAAATGTAGAGGCAAACACATCATCACAACCAA
CTGATTTTTTTATAGGAGTAGATATCAGAATTGACTAAGCATCTGATGTCGCCACATGATAACATCACCAAAATTGCCAG
AAAAAAG-TAAACTCACGAGTGGATGAAAGGAAAACTTGGGTCCATAAATAAGAAAAAACAAAGGTAGATCATAAATACA
TGGGTTCATACAACAATTCCTCAGTCGAGACCTCATCAGGCAAACAACACAAATATCAGTAACTTGCAACAATCTTACTC
CGCACATGATGGTTGCTCACTAATACAACTACAGAAATATAAGTCATGCCAAATCATTTTAATAAGCTATTCTTGCATAA
GGGTATCTAATACCACGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S------------------------S-----SS-
--SS---------S------------SS-S-S-----S-------------------------S----------------
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--------------------------------------------S--S---------------------------S----
---S----------------------------------------------------------------------------
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-------------------------------S----------------S--S----------------------------
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--------------------------------------------------S--------------S--------------
------------S-------------------------------------------------------------------
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---------------------S-----------------------------------S----------------S-----
S-------------------------S-----------------------------------------------------
-------------------------------S-----------S-S----------------------------------
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---------------------------------------------SS-------------------------------SS
-S-----S---------------------------------S--------------------------------------
----------------------------------S---------------------------------------------
--------------------------SSSSSSSS---SS-SSSSSS-SSSS-SSSSSSSS--------------------
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----------------------------------------------------------S---------------------
---------------S--------------------S----S--------------------------------------
--------------------------------------S-------------------------------------S---
S--------------------------------------S---------------------------------S------
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>forward_113
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-------------ATTTCTTGAGGGGCATCGCA-----------------------------------------------
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>reverse_2479
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------------------------------------------------------------------------------CG
TCGCTGAAGGAACCATCT--------------------------------------------------------------
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