Multiple sequence alignment - TraesCS5B01G436700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G436700 chr5B 100.000 2230 0 0 1 2230 610294057 610296286 0.000000e+00 4119.0
1 TraesCS5B01G436700 chr5B 100.000 288 0 0 2454 2741 610296510 610296797 1.450000e-147 532.0
2 TraesCS5B01G436700 chr5B 75.367 341 57 13 1892 2222 488117201 488117524 3.680000e-29 139.0
3 TraesCS5B01G436700 chr5D 89.884 1898 99 36 1 1848 494182005 494183859 0.000000e+00 2355.0
4 TraesCS5B01G436700 chr5D 81.533 287 38 8 2455 2739 268571516 268571789 3.550000e-54 222.0
5 TraesCS5B01G436700 chr5D 92.424 132 9 1 2610 2741 416434634 416434504 1.300000e-43 187.0
6 TraesCS5B01G436700 chr5D 81.900 221 25 7 2455 2668 311946104 311946316 3.630000e-39 172.0
7 TraesCS5B01G436700 chr5A 85.210 1785 136 61 53 1777 617174224 617175940 0.000000e+00 1716.0
8 TraesCS5B01G436700 chr5A 89.671 1278 98 18 628 1884 617187800 617189064 0.000000e+00 1598.0
9 TraesCS5B01G436700 chr5A 80.473 338 48 11 1898 2230 31265987 31265663 2.730000e-60 243.0
10 TraesCS5B01G436700 chr5A 100.000 37 0 0 1 37 617174191 617174227 4.900000e-08 69.4
11 TraesCS5B01G436700 chr6B 84.437 302 25 14 2455 2741 584912300 584912594 7.480000e-71 278.0
12 TraesCS5B01G436700 chr6B 81.319 273 42 6 1956 2222 172729782 172729513 2.140000e-51 213.0
13 TraesCS5B01G436700 chr3D 85.357 280 28 10 2463 2741 523636752 523637019 7.480000e-71 278.0
14 TraesCS5B01G436700 chr3D 84.921 252 33 4 1 252 555333172 555333418 1.630000e-62 250.0
15 TraesCS5B01G436700 chr3D 80.952 336 45 13 1898 2228 520810561 520810240 5.860000e-62 248.0
16 TraesCS5B01G436700 chr3D 89.394 132 13 1 2610 2741 546314443 546314313 6.070000e-37 165.0
17 TraesCS5B01G436700 chr4D 83.333 294 25 7 2455 2741 469904477 469904201 1.630000e-62 250.0
18 TraesCS5B01G436700 chr4D 82.313 294 27 9 2455 2741 25405033 25404758 5.900000e-57 231.0
19 TraesCS5B01G436700 chr4A 84.646 254 33 5 1 252 12377706 12377457 5.860000e-62 248.0
20 TraesCS5B01G436700 chr1D 83.333 294 21 12 2455 2741 480938425 480938153 2.110000e-61 246.0
21 TraesCS5B01G436700 chr7B 82.734 278 40 8 1958 2230 126170336 126170610 9.810000e-60 241.0
22 TraesCS5B01G436700 chr7B 82.014 278 42 8 1958 2230 126207427 126207701 2.120000e-56 230.0
23 TraesCS5B01G436700 chr6A 79.941 339 54 10 1898 2230 108939155 108938825 1.270000e-58 237.0
24 TraesCS5B01G436700 chr6A 82.867 286 25 9 2455 2733 250723399 250723131 4.560000e-58 235.0
25 TraesCS5B01G436700 chr6A 81.481 297 39 12 2457 2741 584888789 584888497 2.120000e-56 230.0
26 TraesCS5B01G436700 chr6A 82.209 163 20 4 2579 2741 375977765 375977612 6.160000e-27 132.0
27 TraesCS5B01G436700 chr1B 83.784 259 31 8 2461 2718 345328016 345327768 4.560000e-58 235.0
28 TraesCS5B01G436700 chr4B 84.454 238 33 2 1995 2228 449195611 449195374 5.900000e-57 231.0
29 TraesCS5B01G436700 chr3A 83.399 253 37 4 1 252 433951706 433951458 2.120000e-56 230.0
30 TraesCS5B01G436700 chr6D 83.396 265 20 11 2455 2712 200488177 200488424 9.880000e-55 224.0
31 TraesCS5B01G436700 chr6D 81.849 292 28 12 2455 2739 60124911 60124638 3.550000e-54 222.0
32 TraesCS5B01G436700 chr2D 79.228 337 50 11 1898 2230 139257548 139257228 1.650000e-52 217.0
33 TraesCS5B01G436700 chr2D 80.797 276 46 5 1960 2230 634073440 634073167 2.770000e-50 209.0
34 TraesCS5B01G436700 chr7D 80.139 287 36 15 2468 2741 89074866 89074588 7.740000e-46 195.0
35 TraesCS5B01G436700 chr3B 80.556 252 39 6 1 252 738626596 738626837 4.660000e-43 185.0
36 TraesCS5B01G436700 chr7A 78.788 231 28 13 1898 2124 250211511 250211724 4.760000e-28 135.0
37 TraesCS5B01G436700 chr1A 76.891 238 35 11 1898 2131 139628685 139628464 1.720000e-22 117.0
38 TraesCS5B01G436700 chr1A 95.122 41 2 0 2190 2230 443792922 443792962 6.340000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G436700 chr5B 610294057 610296797 2740 False 2325.5 4119 100.000 1 2741 2 chr5B.!!$F2 2740
1 TraesCS5B01G436700 chr5D 494182005 494183859 1854 False 2355.0 2355 89.884 1 1848 1 chr5D.!!$F3 1847
2 TraesCS5B01G436700 chr5A 617187800 617189064 1264 False 1598.0 1598 89.671 628 1884 1 chr5A.!!$F1 1256
3 TraesCS5B01G436700 chr5A 617174191 617175940 1749 False 892.7 1716 92.605 1 1777 2 chr5A.!!$F2 1776

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
486 496 0.741915 TCACGTGTCATAGCGGCATA 59.258 50.0 16.51 0.0 0.0 3.14 F
1549 1647 0.179468 TTGTAATAGGCCCGTGGAGC 59.821 55.0 0.00 0.0 0.0 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1669 1767 0.107752 CTTCTCCTTCCTGCTCCTGC 60.108 60.0 0.0 0.0 40.2 4.85 R
2572 2678 0.246635 CGGTGTCAGGACGAAGGATT 59.753 55.0 0.0 0.0 0.0 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 2.931969 CGCTGTATCTGCAGATCACAAA 59.068 45.455 31.92 12.31 38.70 2.83
78 79 7.308435 CAAGAACTTGCTTGGTTAATTAGAGG 58.692 38.462 1.60 0.00 41.15 3.69
98 108 4.685924 AGGTCAAATTGTGCAGTGAAAAG 58.314 39.130 0.00 0.00 0.00 2.27
109 119 5.348179 TGTGCAGTGAAAAGAAATTGTTGTG 59.652 36.000 0.00 0.00 0.00 3.33
110 120 5.348451 GTGCAGTGAAAAGAAATTGTTGTGT 59.652 36.000 0.00 0.00 0.00 3.72
116 126 8.184192 AGTGAAAAGAAATTGTTGTGTGTAGAG 58.816 33.333 0.00 0.00 0.00 2.43
481 491 1.154093 ACCGTCACGTGTCATAGCG 60.154 57.895 16.51 11.02 0.00 4.26
482 492 1.872234 CCGTCACGTGTCATAGCGG 60.872 63.158 16.51 15.59 0.00 5.52
483 493 2.505498 CGTCACGTGTCATAGCGGC 61.505 63.158 16.51 0.00 0.00 6.53
486 496 0.741915 TCACGTGTCATAGCGGCATA 59.258 50.000 16.51 0.00 0.00 3.14
487 497 1.339929 TCACGTGTCATAGCGGCATAT 59.660 47.619 16.51 0.00 0.00 1.78
488 498 2.554893 TCACGTGTCATAGCGGCATATA 59.445 45.455 16.51 0.00 0.00 0.86
489 499 2.661675 CACGTGTCATAGCGGCATATAC 59.338 50.000 7.58 0.00 0.00 1.47
490 500 1.911464 CGTGTCATAGCGGCATATACG 59.089 52.381 1.45 1.53 0.00 3.06
534 547 3.942130 AGGAGCAAATTAAACTGTGCC 57.058 42.857 0.00 0.00 37.73 5.01
535 548 3.230134 AGGAGCAAATTAAACTGTGCCA 58.770 40.909 0.00 0.00 37.73 4.92
540 553 4.768968 AGCAAATTAAACTGTGCCAGATCT 59.231 37.500 8.91 0.00 37.73 2.75
550 563 4.880537 CCAGATCTCGCGCGCCTT 62.881 66.667 27.95 11.80 0.00 4.35
575 588 4.330074 GCGTCTTATATATGCATGTGGGTC 59.670 45.833 10.16 0.00 0.00 4.46
576 589 5.724328 CGTCTTATATATGCATGTGGGTCT 58.276 41.667 10.16 0.00 0.00 3.85
577 590 5.807520 CGTCTTATATATGCATGTGGGTCTC 59.192 44.000 10.16 0.00 0.00 3.36
579 592 5.480422 TCTTATATATGCATGTGGGTCTCGT 59.520 40.000 10.16 0.00 0.00 4.18
581 594 0.901827 TATGCATGTGGGTCTCGTGT 59.098 50.000 10.16 0.00 0.00 4.49
583 596 0.901827 TGCATGTGGGTCTCGTGTAT 59.098 50.000 0.00 0.00 0.00 2.29
584 597 2.104170 TGCATGTGGGTCTCGTGTATA 58.896 47.619 0.00 0.00 0.00 1.47
585 598 2.159156 TGCATGTGGGTCTCGTGTATAC 60.159 50.000 0.00 0.00 0.00 1.47
788 828 1.269448 GCCATGAAAGCGAAGTCCAAA 59.731 47.619 0.00 0.00 0.00 3.28
813 853 1.289800 GGCGAGAAGTTGACCGAACC 61.290 60.000 0.00 0.00 34.80 3.62
832 872 2.624316 CATGGCGAATGCATATGGAC 57.376 50.000 0.00 0.00 45.35 4.02
884 930 4.332428 ACTAACCGCTATTATGGACCAC 57.668 45.455 0.00 0.00 0.00 4.16
931 977 4.503741 TGGTTCTTGCTACAAAATCAGC 57.496 40.909 0.00 0.00 38.31 4.26
934 980 4.320202 GGTTCTTGCTACAAAATCAGCGAA 60.320 41.667 0.00 0.00 40.79 4.70
958 1006 2.048023 CATTCCCAGTGCCACGCAT 61.048 57.895 0.00 0.00 41.91 4.73
976 1024 1.003545 CATAGTTCGCGCATCAAAGGG 60.004 52.381 8.75 0.00 0.00 3.95
980 1028 3.880846 CGCGCATCAAAGGGGAGC 61.881 66.667 8.75 0.00 0.00 4.70
982 1030 3.056313 GCGCATCAAAGGGGAGCAC 62.056 63.158 0.30 0.00 0.00 4.40
987 1035 1.672881 CATCAAAGGGGAGCACGAATC 59.327 52.381 0.00 0.00 0.00 2.52
1010 1058 1.750399 CAAGTCCAATGGGAGCGGG 60.750 63.158 0.00 0.00 46.12 6.13
1023 1071 3.560278 GCGGGTCATAACGGCGTG 61.560 66.667 15.70 0.23 0.00 5.34
1404 1491 0.579630 TGCGCAAGTACGAACAACAG 59.420 50.000 8.16 0.00 41.68 3.16
1506 1600 0.390735 GTTACCCCTGCAGGTACGTG 60.391 60.000 30.63 15.07 42.16 4.49
1507 1601 2.175035 TTACCCCTGCAGGTACGTGC 62.175 60.000 30.63 28.93 42.16 5.34
1549 1647 0.179468 TTGTAATAGGCCCGTGGAGC 59.821 55.000 0.00 0.00 0.00 4.70
1552 1650 1.407656 TAATAGGCCCGTGGAGCTGG 61.408 60.000 0.00 0.00 0.00 4.85
1671 1769 4.771127 GGGAACGTCAACAGAGCA 57.229 55.556 0.00 0.00 0.00 4.26
1672 1770 2.533318 GGGAACGTCAACAGAGCAG 58.467 57.895 0.00 0.00 0.00 4.24
1747 1845 2.032681 GTGGACCCTGACACCTGC 59.967 66.667 0.00 0.00 0.00 4.85
1752 1850 0.108585 GACCCTGACACCTGCTGAAA 59.891 55.000 0.00 0.00 0.00 2.69
1776 1882 3.142124 ACGGGGCGTGTAAATGTAC 57.858 52.632 0.00 0.00 39.18 2.90
1777 1883 0.737019 ACGGGGCGTGTAAATGTACG 60.737 55.000 0.00 0.00 39.18 3.67
1778 1884 0.458197 CGGGGCGTGTAAATGTACGA 60.458 55.000 0.00 0.00 42.54 3.43
1779 1885 1.803625 CGGGGCGTGTAAATGTACGAT 60.804 52.381 0.00 0.00 42.54 3.73
1780 1886 1.862827 GGGGCGTGTAAATGTACGATC 59.137 52.381 0.00 0.00 42.54 3.69
1781 1887 1.519758 GGGCGTGTAAATGTACGATCG 59.480 52.381 14.88 14.88 42.54 3.69
1794 1900 0.960861 ACGATCGGACACAGCAGAGA 60.961 55.000 20.98 0.00 0.00 3.10
1850 1956 5.918426 TTTAGCATGGCTTGAATGAATGA 57.082 34.783 4.32 0.00 40.44 2.57
1863 1969 0.916845 TGAATGATGGGGAACGGGGA 60.917 55.000 0.00 0.00 0.00 4.81
1864 1970 0.179018 GAATGATGGGGAACGGGGAG 60.179 60.000 0.00 0.00 0.00 4.30
1879 1985 1.676014 GGGGAGTCTCGTTGGTCATTG 60.676 57.143 0.00 0.00 0.00 2.82
1880 1986 1.079503 GGAGTCTCGTTGGTCATTGC 58.920 55.000 0.00 0.00 0.00 3.56
1881 1987 1.608025 GGAGTCTCGTTGGTCATTGCA 60.608 52.381 0.00 0.00 0.00 4.08
1882 1988 1.461127 GAGTCTCGTTGGTCATTGCAC 59.539 52.381 0.00 0.00 0.00 4.57
1883 1989 1.070758 AGTCTCGTTGGTCATTGCACT 59.929 47.619 0.00 0.00 0.00 4.40
1884 1990 1.461127 GTCTCGTTGGTCATTGCACTC 59.539 52.381 0.00 0.00 0.00 3.51
1885 1991 1.069978 TCTCGTTGGTCATTGCACTCA 59.930 47.619 0.00 0.00 0.00 3.41
1886 1992 1.462283 CTCGTTGGTCATTGCACTCAG 59.538 52.381 0.00 0.00 0.00 3.35
1887 1993 0.518636 CGTTGGTCATTGCACTCAGG 59.481 55.000 0.00 0.00 0.00 3.86
1888 1994 0.883833 GTTGGTCATTGCACTCAGGG 59.116 55.000 0.00 0.00 0.00 4.45
1889 1995 0.895100 TTGGTCATTGCACTCAGGGC 60.895 55.000 0.00 0.00 0.00 5.19
1890 1996 1.303561 GGTCATTGCACTCAGGGCA 60.304 57.895 0.00 0.00 40.00 5.36
1891 1997 1.589716 GGTCATTGCACTCAGGGCAC 61.590 60.000 0.00 0.00 41.75 5.01
1892 1998 0.607489 GTCATTGCACTCAGGGCACT 60.607 55.000 0.00 0.00 41.75 4.40
1893 1999 0.983467 TCATTGCACTCAGGGCACTA 59.017 50.000 0.00 0.00 41.75 2.74
1894 2000 1.350684 TCATTGCACTCAGGGCACTAA 59.649 47.619 0.00 0.00 41.75 2.24
1895 2001 1.470098 CATTGCACTCAGGGCACTAAC 59.530 52.381 0.00 0.00 41.75 2.34
1896 2002 0.602638 TTGCACTCAGGGCACTAACG 60.603 55.000 0.00 0.00 41.75 3.18
1897 2003 1.741770 GCACTCAGGGCACTAACGG 60.742 63.158 0.00 0.00 0.00 4.44
1898 2004 1.741770 CACTCAGGGCACTAACGGC 60.742 63.158 0.00 0.00 0.00 5.68
1899 2005 2.214216 ACTCAGGGCACTAACGGCA 61.214 57.895 0.00 0.00 0.00 5.69
1900 2006 1.003839 CTCAGGGCACTAACGGCAA 60.004 57.895 0.00 0.00 0.00 4.52
1901 2007 1.298859 CTCAGGGCACTAACGGCAAC 61.299 60.000 0.00 0.00 0.00 4.17
1902 2008 1.302511 CAGGGCACTAACGGCAACT 60.303 57.895 0.00 0.00 0.00 3.16
1903 2009 1.003718 AGGGCACTAACGGCAACTC 60.004 57.895 0.00 0.00 0.00 3.01
1904 2010 2.038837 GGGCACTAACGGCAACTCC 61.039 63.158 0.00 0.00 0.00 3.85
1905 2011 1.302192 GGCACTAACGGCAACTCCA 60.302 57.895 0.00 0.00 34.01 3.86
1906 2012 0.887387 GGCACTAACGGCAACTCCAA 60.887 55.000 0.00 0.00 34.01 3.53
1907 2013 0.237498 GCACTAACGGCAACTCCAAC 59.763 55.000 0.00 0.00 34.01 3.77
1908 2014 0.511221 CACTAACGGCAACTCCAACG 59.489 55.000 0.00 0.00 34.01 4.10
1909 2015 1.226030 ACTAACGGCAACTCCAACGC 61.226 55.000 0.00 0.00 34.01 4.84
1910 2016 2.222953 CTAACGGCAACTCCAACGCG 62.223 60.000 3.53 3.53 34.01 6.01
1911 2017 2.974935 TAACGGCAACTCCAACGCGT 62.975 55.000 5.58 5.58 34.01 6.01
1912 2018 3.645975 CGGCAACTCCAACGCGTT 61.646 61.111 20.79 20.79 34.01 4.84
1913 2019 2.051345 GGCAACTCCAACGCGTTG 60.051 61.111 38.24 38.24 42.47 4.10
1914 2020 2.539338 GGCAACTCCAACGCGTTGA 61.539 57.895 44.26 30.35 42.24 3.18
1915 2021 1.368850 GCAACTCCAACGCGTTGAC 60.369 57.895 44.26 24.98 42.24 3.18
1916 2022 1.278637 CAACTCCAACGCGTTGACC 59.721 57.895 44.26 0.00 42.24 4.02
1917 2023 1.890510 AACTCCAACGCGTTGACCC 60.891 57.895 44.26 0.00 42.93 4.46
1918 2024 2.280524 CTCCAACGCGTTGACCCA 60.281 61.111 44.26 26.46 42.93 4.51
1919 2025 1.671054 CTCCAACGCGTTGACCCAT 60.671 57.895 44.26 12.87 42.93 4.00
1920 2026 1.228003 TCCAACGCGTTGACCCATT 60.228 52.632 44.26 12.04 42.93 3.16
1921 2027 0.820074 TCCAACGCGTTGACCCATTT 60.820 50.000 44.26 11.23 42.93 2.32
1922 2028 0.386731 CCAACGCGTTGACCCATTTC 60.387 55.000 44.26 0.00 42.93 2.17
1923 2029 0.724453 CAACGCGTTGACCCATTTCG 60.724 55.000 41.29 14.73 42.93 3.46
1924 2030 1.161563 AACGCGTTGACCCATTTCGT 61.162 50.000 26.00 0.00 0.00 3.85
1925 2031 1.131826 CGCGTTGACCCATTTCGTC 59.868 57.895 0.00 0.00 0.00 4.20
1926 2032 1.289109 CGCGTTGACCCATTTCGTCT 61.289 55.000 0.00 0.00 0.00 4.18
1927 2033 0.165944 GCGTTGACCCATTTCGTCTG 59.834 55.000 0.00 0.00 0.00 3.51
1928 2034 0.165944 CGTTGACCCATTTCGTCTGC 59.834 55.000 0.00 0.00 0.00 4.26
1929 2035 0.165944 GTTGACCCATTTCGTCTGCG 59.834 55.000 0.00 0.00 39.92 5.18
1930 2036 0.250124 TTGACCCATTTCGTCTGCGT 60.250 50.000 0.00 0.00 39.49 5.24
1931 2037 0.948623 TGACCCATTTCGTCTGCGTG 60.949 55.000 0.00 0.00 39.49 5.34
1932 2038 2.240612 GACCCATTTCGTCTGCGTGC 62.241 60.000 0.00 0.00 39.49 5.34
1933 2039 2.096406 CCATTTCGTCTGCGTGCG 59.904 61.111 0.00 0.00 39.49 5.34
1934 2040 2.667318 CCATTTCGTCTGCGTGCGT 61.667 57.895 0.00 0.00 39.49 5.24
1935 2041 1.225475 CATTTCGTCTGCGTGCGTC 60.225 57.895 0.00 0.00 39.49 5.19
1936 2042 2.380410 ATTTCGTCTGCGTGCGTCC 61.380 57.895 0.00 0.00 39.49 4.79
1940 2046 3.335534 GTCTGCGTGCGTCCGTTT 61.336 61.111 0.00 0.00 0.00 3.60
1941 2047 2.017783 GTCTGCGTGCGTCCGTTTA 61.018 57.895 0.00 0.00 0.00 2.01
1942 2048 1.300003 TCTGCGTGCGTCCGTTTAA 60.300 52.632 0.00 0.00 0.00 1.52
1943 2049 0.875040 TCTGCGTGCGTCCGTTTAAA 60.875 50.000 0.00 0.00 0.00 1.52
1944 2050 0.165079 CTGCGTGCGTCCGTTTAAAT 59.835 50.000 0.00 0.00 0.00 1.40
1945 2051 0.164217 TGCGTGCGTCCGTTTAAATC 59.836 50.000 0.00 0.00 0.00 2.17
1946 2052 0.850391 GCGTGCGTCCGTTTAAATCG 60.850 55.000 0.00 0.00 0.00 3.34
1948 2054 0.519792 GTGCGTCCGTTTAAATCGGC 60.520 55.000 18.53 14.14 46.49 5.54
1949 2055 1.296360 GCGTCCGTTTAAATCGGCG 60.296 57.895 23.72 23.72 46.49 6.46
1950 2056 1.296360 CGTCCGTTTAAATCGGCGC 60.296 57.895 18.53 0.00 46.49 6.53
1951 2057 1.296360 GTCCGTTTAAATCGGCGCG 60.296 57.895 18.53 0.00 46.49 6.86
1952 2058 1.737371 TCCGTTTAAATCGGCGCGT 60.737 52.632 18.53 0.00 46.49 6.01
1953 2059 1.133049 CCGTTTAAATCGGCGCGTT 59.867 52.632 8.43 0.37 41.48 4.84
1954 2060 0.854445 CCGTTTAAATCGGCGCGTTC 60.854 55.000 8.43 0.00 41.48 3.95
1955 2061 1.177330 CGTTTAAATCGGCGCGTTCG 61.177 55.000 8.43 12.91 39.07 3.95
1956 2062 0.854445 GTTTAAATCGGCGCGTTCGG 60.854 55.000 19.95 4.80 35.95 4.30
1957 2063 1.290491 TTTAAATCGGCGCGTTCGGT 61.290 50.000 19.95 12.88 35.95 4.69
1958 2064 1.685640 TTAAATCGGCGCGTTCGGTC 61.686 55.000 19.95 0.00 35.95 4.79
1968 2074 4.651008 GTTCGGTCGGCGTGGACA 62.651 66.667 6.85 0.00 38.70 4.02
1969 2075 3.914117 TTCGGTCGGCGTGGACAA 61.914 61.111 6.85 0.00 38.70 3.18
1970 2076 3.442512 TTCGGTCGGCGTGGACAAA 62.443 57.895 6.85 0.00 38.70 2.83
1971 2077 2.919960 TTCGGTCGGCGTGGACAAAA 62.920 55.000 6.85 0.00 38.70 2.44
1972 2078 2.535788 CGGTCGGCGTGGACAAAAA 61.536 57.895 6.85 0.00 38.70 1.94
1989 2095 1.749153 AAAAATGGTCAAACGCGTCG 58.251 45.000 14.44 7.35 0.00 5.12
1990 2096 0.938713 AAAATGGTCAAACGCGTCGA 59.061 45.000 14.44 10.11 0.00 4.20
1991 2097 1.153353 AAATGGTCAAACGCGTCGAT 58.847 45.000 14.44 0.00 0.00 3.59
1992 2098 0.719465 AATGGTCAAACGCGTCGATC 59.281 50.000 14.44 13.79 0.00 3.69
1993 2099 0.108804 ATGGTCAAACGCGTCGATCT 60.109 50.000 14.44 0.00 0.00 2.75
1994 2100 0.522626 TGGTCAAACGCGTCGATCTA 59.477 50.000 14.44 3.00 0.00 1.98
1995 2101 1.068402 TGGTCAAACGCGTCGATCTAA 60.068 47.619 14.44 0.00 0.00 2.10
1996 2102 1.987770 GGTCAAACGCGTCGATCTAAA 59.012 47.619 14.44 0.00 0.00 1.85
1997 2103 2.601763 GGTCAAACGCGTCGATCTAAAT 59.398 45.455 14.44 0.00 0.00 1.40
1998 2104 3.541516 GGTCAAACGCGTCGATCTAAATG 60.542 47.826 14.44 1.06 0.00 2.32
1999 2105 2.601314 TCAAACGCGTCGATCTAAATGG 59.399 45.455 14.44 0.00 0.00 3.16
2000 2106 2.572191 AACGCGTCGATCTAAATGGA 57.428 45.000 14.44 0.00 0.00 3.41
2001 2107 1.836383 ACGCGTCGATCTAAATGGAC 58.164 50.000 5.58 0.00 37.29 4.02
2006 2112 1.517276 GTCGATCTAAATGGACGTGCG 59.483 52.381 1.60 0.00 32.04 5.34
2007 2113 1.133598 TCGATCTAAATGGACGTGCGT 59.866 47.619 1.60 0.00 0.00 5.24
2008 2114 1.517276 CGATCTAAATGGACGTGCGTC 59.483 52.381 15.44 15.44 43.87 5.19
2016 2122 2.170273 GACGTGCGTCCGCTTTTC 59.830 61.111 13.31 2.64 42.51 2.29
2017 2123 2.586635 ACGTGCGTCCGCTTTTCA 60.587 55.556 13.31 0.00 42.51 2.69
2018 2124 1.897398 GACGTGCGTCCGCTTTTCAT 61.897 55.000 13.31 0.00 42.51 2.57
2019 2125 1.225745 CGTGCGTCCGCTTTTCATC 60.226 57.895 13.31 0.00 42.51 2.92
2020 2126 1.134694 GTGCGTCCGCTTTTCATCC 59.865 57.895 13.31 0.00 42.51 3.51
2021 2127 2.387445 TGCGTCCGCTTTTCATCCG 61.387 57.895 13.31 0.00 42.51 4.18
2022 2128 2.399611 CGTCCGCTTTTCATCCGC 59.600 61.111 0.00 0.00 0.00 5.54
2023 2129 2.791927 GTCCGCTTTTCATCCGCC 59.208 61.111 0.00 0.00 0.00 6.13
2024 2130 1.745489 GTCCGCTTTTCATCCGCCT 60.745 57.895 0.00 0.00 0.00 5.52
2025 2131 1.745115 TCCGCTTTTCATCCGCCTG 60.745 57.895 0.00 0.00 0.00 4.85
2026 2132 2.100991 CGCTTTTCATCCGCCTGC 59.899 61.111 0.00 0.00 0.00 4.85
2027 2133 2.491621 GCTTTTCATCCGCCTGCC 59.508 61.111 0.00 0.00 0.00 4.85
2028 2134 2.793946 CTTTTCATCCGCCTGCCG 59.206 61.111 0.00 0.00 0.00 5.69
2029 2135 1.745115 CTTTTCATCCGCCTGCCGA 60.745 57.895 0.00 0.00 40.02 5.54
2030 2136 1.982073 CTTTTCATCCGCCTGCCGAC 61.982 60.000 0.00 0.00 40.02 4.79
2031 2137 2.463589 TTTTCATCCGCCTGCCGACT 62.464 55.000 0.00 0.00 40.02 4.18
2032 2138 2.463589 TTTCATCCGCCTGCCGACTT 62.464 55.000 0.00 0.00 40.02 3.01
2033 2139 2.852495 TTCATCCGCCTGCCGACTTC 62.852 60.000 0.00 0.00 40.02 3.01
2034 2140 4.162690 ATCCGCCTGCCGACTTCC 62.163 66.667 0.00 0.00 40.02 3.46
2048 2154 5.890424 CCGACTTCCAGGCTTATTTTTAA 57.110 39.130 0.00 0.00 0.00 1.52
2049 2155 5.880341 CCGACTTCCAGGCTTATTTTTAAG 58.120 41.667 0.00 0.00 0.00 1.85
2059 2165 5.389642 GCTTATTTTTAAGCCGGATTTGC 57.610 39.130 11.69 0.00 44.85 3.68
2060 2166 4.867608 GCTTATTTTTAAGCCGGATTTGCA 59.132 37.500 11.69 0.00 44.85 4.08
2061 2167 5.523552 GCTTATTTTTAAGCCGGATTTGCAT 59.476 36.000 11.69 0.59 44.85 3.96
2062 2168 6.292328 GCTTATTTTTAAGCCGGATTTGCATC 60.292 38.462 11.69 0.00 44.85 3.91
2063 2169 2.842208 TTTAAGCCGGATTTGCATCG 57.158 45.000 11.69 0.00 0.00 3.84
2064 2170 1.021202 TTAAGCCGGATTTGCATCGG 58.979 50.000 11.69 12.08 45.84 4.18
2067 2173 4.612536 CCGGATTTGCATCGGCGC 62.613 66.667 0.00 0.00 45.35 6.53
2068 2174 3.875039 CGGATTTGCATCGGCGCA 61.875 61.111 10.83 0.00 45.35 6.09
2069 2175 2.025156 GGATTTGCATCGGCGCAG 59.975 61.111 10.83 5.07 44.14 5.18
2070 2176 2.472059 GGATTTGCATCGGCGCAGA 61.472 57.895 13.82 13.82 44.14 4.26
2071 2177 1.297893 GATTTGCATCGGCGCAGAC 60.298 57.895 13.72 1.25 44.14 3.51
2072 2178 1.980951 GATTTGCATCGGCGCAGACA 61.981 55.000 13.72 4.36 44.14 3.41
2073 2179 2.257286 ATTTGCATCGGCGCAGACAC 62.257 55.000 13.72 8.57 44.14 3.67
2076 2182 3.250323 CATCGGCGCAGACACGAG 61.250 66.667 13.72 0.64 40.21 4.18
2077 2183 3.440415 ATCGGCGCAGACACGAGA 61.440 61.111 13.72 0.00 40.21 4.04
2078 2184 3.685214 ATCGGCGCAGACACGAGAC 62.685 63.158 13.72 0.00 40.21 3.36
2081 2187 4.400109 GCGCAGACACGAGACGGA 62.400 66.667 0.30 0.00 34.06 4.69
2082 2188 2.502080 CGCAGACACGAGACGGAC 60.502 66.667 0.00 0.00 34.06 4.79
2083 2189 2.502080 GCAGACACGAGACGGACG 60.502 66.667 0.00 0.00 0.00 4.79
2084 2190 2.502080 CAGACACGAGACGGACGC 60.502 66.667 0.00 0.00 0.00 5.19
2085 2191 2.976350 AGACACGAGACGGACGCA 60.976 61.111 0.00 0.00 0.00 5.24
2086 2192 2.799916 GACACGAGACGGACGCAC 60.800 66.667 0.00 0.00 0.00 5.34
2087 2193 4.678269 ACACGAGACGGACGCACG 62.678 66.667 0.00 0.00 40.31 5.34
2105 2211 3.148279 CTCGCCCGCCTACTCCTT 61.148 66.667 0.00 0.00 0.00 3.36
2106 2212 3.140225 CTCGCCCGCCTACTCCTTC 62.140 68.421 0.00 0.00 0.00 3.46
2107 2213 4.222847 CGCCCGCCTACTCCTTCC 62.223 72.222 0.00 0.00 0.00 3.46
2108 2214 3.081409 GCCCGCCTACTCCTTCCA 61.081 66.667 0.00 0.00 0.00 3.53
2109 2215 2.901042 CCCGCCTACTCCTTCCAC 59.099 66.667 0.00 0.00 0.00 4.02
2110 2216 1.686110 CCCGCCTACTCCTTCCACT 60.686 63.158 0.00 0.00 0.00 4.00
2111 2217 1.517832 CCGCCTACTCCTTCCACTG 59.482 63.158 0.00 0.00 0.00 3.66
2112 2218 1.517832 CGCCTACTCCTTCCACTGG 59.482 63.158 0.00 0.00 0.00 4.00
2113 2219 1.222113 GCCTACTCCTTCCACTGGC 59.778 63.158 0.00 0.00 0.00 4.85
2114 2220 1.268283 GCCTACTCCTTCCACTGGCT 61.268 60.000 0.00 0.00 36.32 4.75
2115 2221 0.827368 CCTACTCCTTCCACTGGCTC 59.173 60.000 0.00 0.00 0.00 4.70
2116 2222 0.457851 CTACTCCTTCCACTGGCTCG 59.542 60.000 0.00 0.00 0.00 5.03
2117 2223 1.605058 TACTCCTTCCACTGGCTCGC 61.605 60.000 0.00 0.00 0.00 5.03
2118 2224 2.604686 TCCTTCCACTGGCTCGCT 60.605 61.111 0.00 0.00 0.00 4.93
2119 2225 2.125350 CCTTCCACTGGCTCGCTC 60.125 66.667 0.00 0.00 0.00 5.03
2120 2226 2.507992 CTTCCACTGGCTCGCTCG 60.508 66.667 0.00 0.00 0.00 5.03
2121 2227 3.288308 CTTCCACTGGCTCGCTCGT 62.288 63.158 0.00 0.00 0.00 4.18
2122 2228 3.282745 TTCCACTGGCTCGCTCGTC 62.283 63.158 0.00 0.00 0.00 4.20
2133 2239 2.742372 GCTCGTCGGTGGCACATT 60.742 61.111 20.82 0.00 44.52 2.71
2134 2240 3.027170 GCTCGTCGGTGGCACATTG 62.027 63.158 20.82 8.68 44.52 2.82
2135 2241 2.358125 TCGTCGGTGGCACATTGG 60.358 61.111 20.82 5.82 44.52 3.16
2136 2242 2.668212 CGTCGGTGGCACATTGGT 60.668 61.111 20.82 0.00 44.52 3.67
2137 2243 2.677003 CGTCGGTGGCACATTGGTC 61.677 63.158 20.82 0.00 44.52 4.02
2138 2244 1.599518 GTCGGTGGCACATTGGTCA 60.600 57.895 20.82 0.00 44.52 4.02
2139 2245 0.960364 GTCGGTGGCACATTGGTCAT 60.960 55.000 20.82 0.00 44.52 3.06
2140 2246 0.676466 TCGGTGGCACATTGGTCATC 60.676 55.000 20.82 0.00 44.52 2.92
2141 2247 1.656818 CGGTGGCACATTGGTCATCC 61.657 60.000 20.82 0.00 44.52 3.51
2142 2248 0.323725 GGTGGCACATTGGTCATCCT 60.324 55.000 20.82 0.00 44.52 3.24
2143 2249 1.098050 GTGGCACATTGGTCATCCTC 58.902 55.000 13.86 0.00 44.52 3.71
2144 2250 0.994247 TGGCACATTGGTCATCCTCT 59.006 50.000 0.00 0.00 34.23 3.69
2145 2251 1.065199 TGGCACATTGGTCATCCTCTC 60.065 52.381 0.00 0.00 34.23 3.20
2146 2252 1.673168 GCACATTGGTCATCCTCTCC 58.327 55.000 0.00 0.00 34.23 3.71
2147 2253 1.748591 GCACATTGGTCATCCTCTCCC 60.749 57.143 0.00 0.00 34.23 4.30
2148 2254 1.561076 CACATTGGTCATCCTCTCCCA 59.439 52.381 0.00 0.00 34.23 4.37
2149 2255 2.174210 CACATTGGTCATCCTCTCCCAT 59.826 50.000 0.00 0.00 34.23 4.00
2150 2256 2.854967 ACATTGGTCATCCTCTCCCATT 59.145 45.455 0.00 0.00 34.23 3.16
2151 2257 3.117738 ACATTGGTCATCCTCTCCCATTC 60.118 47.826 0.00 0.00 34.23 2.67
2152 2258 1.511613 TGGTCATCCTCTCCCATTCC 58.488 55.000 0.00 0.00 34.23 3.01
2153 2259 1.274358 TGGTCATCCTCTCCCATTCCA 60.274 52.381 0.00 0.00 34.23 3.53
2154 2260 1.846439 GGTCATCCTCTCCCATTCCAA 59.154 52.381 0.00 0.00 0.00 3.53
2155 2261 2.422093 GGTCATCCTCTCCCATTCCAAC 60.422 54.545 0.00 0.00 0.00 3.77
2156 2262 2.239654 GTCATCCTCTCCCATTCCAACA 59.760 50.000 0.00 0.00 0.00 3.33
2157 2263 2.507058 TCATCCTCTCCCATTCCAACAG 59.493 50.000 0.00 0.00 0.00 3.16
2158 2264 0.620556 TCCTCTCCCATTCCAACAGC 59.379 55.000 0.00 0.00 0.00 4.40
2159 2265 0.329261 CCTCTCCCATTCCAACAGCA 59.671 55.000 0.00 0.00 0.00 4.41
2160 2266 1.272092 CCTCTCCCATTCCAACAGCAA 60.272 52.381 0.00 0.00 0.00 3.91
2161 2267 2.517959 CTCTCCCATTCCAACAGCAAA 58.482 47.619 0.00 0.00 0.00 3.68
2162 2268 2.229784 CTCTCCCATTCCAACAGCAAAC 59.770 50.000 0.00 0.00 0.00 2.93
2163 2269 1.273327 CTCCCATTCCAACAGCAAACC 59.727 52.381 0.00 0.00 0.00 3.27
2164 2270 0.321346 CCCATTCCAACAGCAAACCC 59.679 55.000 0.00 0.00 0.00 4.11
2165 2271 0.321346 CCATTCCAACAGCAAACCCC 59.679 55.000 0.00 0.00 0.00 4.95
2166 2272 0.321346 CATTCCAACAGCAAACCCCC 59.679 55.000 0.00 0.00 0.00 5.40
2167 2273 1.184970 ATTCCAACAGCAAACCCCCG 61.185 55.000 0.00 0.00 0.00 5.73
2168 2274 3.989787 CCAACAGCAAACCCCCGC 61.990 66.667 0.00 0.00 0.00 6.13
2169 2275 3.989787 CAACAGCAAACCCCCGCC 61.990 66.667 0.00 0.00 0.00 6.13
2170 2276 4.218686 AACAGCAAACCCCCGCCT 62.219 61.111 0.00 0.00 0.00 5.52
2171 2277 4.974721 ACAGCAAACCCCCGCCTG 62.975 66.667 0.00 0.00 0.00 4.85
2175 2281 4.994756 CAAACCCCCGCCTGCCTT 62.995 66.667 0.00 0.00 0.00 4.35
2176 2282 4.678743 AAACCCCCGCCTGCCTTC 62.679 66.667 0.00 0.00 0.00 3.46
2179 2285 4.803908 CCCCCGCCTGCCTTCTTC 62.804 72.222 0.00 0.00 0.00 2.87
2180 2286 4.033776 CCCCGCCTGCCTTCTTCA 62.034 66.667 0.00 0.00 0.00 3.02
2181 2287 2.273449 CCCGCCTGCCTTCTTCAT 59.727 61.111 0.00 0.00 0.00 2.57
2182 2288 1.821332 CCCGCCTGCCTTCTTCATC 60.821 63.158 0.00 0.00 0.00 2.92
2183 2289 2.176273 CCGCCTGCCTTCTTCATCG 61.176 63.158 0.00 0.00 0.00 3.84
2184 2290 1.448540 CGCCTGCCTTCTTCATCGT 60.449 57.895 0.00 0.00 0.00 3.73
2185 2291 1.021390 CGCCTGCCTTCTTCATCGTT 61.021 55.000 0.00 0.00 0.00 3.85
2186 2292 0.449388 GCCTGCCTTCTTCATCGTTG 59.551 55.000 0.00 0.00 0.00 4.10
2187 2293 1.945819 GCCTGCCTTCTTCATCGTTGA 60.946 52.381 0.00 0.00 0.00 3.18
2188 2294 2.636830 CCTGCCTTCTTCATCGTTGAT 58.363 47.619 0.00 0.00 0.00 2.57
2189 2295 2.353889 CCTGCCTTCTTCATCGTTGATG 59.646 50.000 0.00 0.32 41.00 3.07
2190 2296 3.005554 CTGCCTTCTTCATCGTTGATGT 58.994 45.455 6.68 0.00 40.55 3.06
2191 2297 3.002791 TGCCTTCTTCATCGTTGATGTC 58.997 45.455 6.68 0.73 40.55 3.06
2192 2298 2.029728 GCCTTCTTCATCGTTGATGTCG 59.970 50.000 6.68 0.55 40.55 4.35
2193 2299 2.029728 CCTTCTTCATCGTTGATGTCGC 59.970 50.000 6.68 0.00 40.55 5.19
2194 2300 1.640428 TCTTCATCGTTGATGTCGCC 58.360 50.000 6.68 0.00 40.55 5.54
2195 2301 0.298707 CTTCATCGTTGATGTCGCCG 59.701 55.000 6.68 0.00 40.55 6.46
2196 2302 1.692148 TTCATCGTTGATGTCGCCGC 61.692 55.000 6.68 0.00 40.55 6.53
2197 2303 2.890474 ATCGTTGATGTCGCCGCC 60.890 61.111 0.00 0.00 0.00 6.13
2200 2306 2.824041 GTTGATGTCGCCGCCCAT 60.824 61.111 0.00 0.00 0.00 4.00
2201 2307 2.045438 TTGATGTCGCCGCCCATT 60.045 55.556 0.00 0.00 0.00 3.16
2202 2308 1.677300 TTGATGTCGCCGCCCATTT 60.677 52.632 0.00 0.00 0.00 2.32
2203 2309 1.247419 TTGATGTCGCCGCCCATTTT 61.247 50.000 0.00 0.00 0.00 1.82
2204 2310 1.247419 TGATGTCGCCGCCCATTTTT 61.247 50.000 0.00 0.00 0.00 1.94
2218 2324 3.758172 TTTTTCGGTGCCTCTGCC 58.242 55.556 0.00 0.00 36.33 4.85
2219 2325 1.152860 TTTTTCGGTGCCTCTGCCA 60.153 52.632 0.00 0.00 36.33 4.92
2220 2326 1.172180 TTTTTCGGTGCCTCTGCCAG 61.172 55.000 0.00 0.00 36.33 4.85
2221 2327 4.704833 TTCGGTGCCTCTGCCAGC 62.705 66.667 0.00 0.00 36.33 4.85
2492 2598 4.778143 GCCCGCCACCATCGTCTT 62.778 66.667 0.00 0.00 0.00 3.01
2493 2599 2.819595 CCCGCCACCATCGTCTTG 60.820 66.667 0.00 0.00 0.00 3.02
2494 2600 2.047274 CCGCCACCATCGTCTTGT 60.047 61.111 0.00 0.00 0.00 3.16
2495 2601 2.100631 CCGCCACCATCGTCTTGTC 61.101 63.158 0.00 0.00 0.00 3.18
2496 2602 2.444624 CGCCACCATCGTCTTGTCG 61.445 63.158 0.00 0.00 0.00 4.35
2497 2603 2.740714 GCCACCATCGTCTTGTCGC 61.741 63.158 0.00 0.00 0.00 5.19
2498 2604 2.100631 CCACCATCGTCTTGTCGCC 61.101 63.158 0.00 0.00 0.00 5.54
2499 2605 2.126071 ACCATCGTCTTGTCGCCG 60.126 61.111 0.00 0.00 0.00 6.46
2500 2606 2.885644 CCATCGTCTTGTCGCCGG 60.886 66.667 0.00 0.00 0.00 6.13
2501 2607 2.885644 CATCGTCTTGTCGCCGGG 60.886 66.667 2.18 0.00 0.00 5.73
2502 2608 3.066190 ATCGTCTTGTCGCCGGGA 61.066 61.111 2.18 0.00 0.00 5.14
2503 2609 2.642254 ATCGTCTTGTCGCCGGGAA 61.642 57.895 2.18 0.00 0.00 3.97
2504 2610 2.830704 ATCGTCTTGTCGCCGGGAAC 62.831 60.000 2.18 0.00 0.00 3.62
2517 2623 4.813346 GGAACCGAAAGCTTCCCA 57.187 55.556 0.00 0.00 31.20 4.37
2518 2624 2.254471 GGAACCGAAAGCTTCCCAC 58.746 57.895 0.00 0.00 31.20 4.61
2519 2625 0.250770 GGAACCGAAAGCTTCCCACT 60.251 55.000 0.00 0.00 31.20 4.00
2520 2626 1.157585 GAACCGAAAGCTTCCCACTC 58.842 55.000 0.00 0.00 0.00 3.51
2521 2627 0.250770 AACCGAAAGCTTCCCACTCC 60.251 55.000 0.00 0.00 0.00 3.85
2522 2628 1.377333 CCGAAAGCTTCCCACTCCC 60.377 63.158 0.00 0.00 0.00 4.30
2523 2629 1.374947 CGAAAGCTTCCCACTCCCA 59.625 57.895 0.00 0.00 0.00 4.37
2524 2630 0.955919 CGAAAGCTTCCCACTCCCAC 60.956 60.000 0.00 0.00 0.00 4.61
2525 2631 0.402121 GAAAGCTTCCCACTCCCACT 59.598 55.000 0.00 0.00 0.00 4.00
2526 2632 0.402121 AAAGCTTCCCACTCCCACTC 59.598 55.000 0.00 0.00 0.00 3.51
2527 2633 1.492993 AAGCTTCCCACTCCCACTCC 61.493 60.000 0.00 0.00 0.00 3.85
2528 2634 2.972819 GCTTCCCACTCCCACTCCC 61.973 68.421 0.00 0.00 0.00 4.30
2529 2635 2.204090 TTCCCACTCCCACTCCCC 60.204 66.667 0.00 0.00 0.00 4.81
2530 2636 3.883822 TTCCCACTCCCACTCCCCC 62.884 68.421 0.00 0.00 0.00 5.40
2532 2638 4.715130 CCACTCCCACTCCCCCGA 62.715 72.222 0.00 0.00 0.00 5.14
2533 2639 3.391382 CACTCCCACTCCCCCGAC 61.391 72.222 0.00 0.00 0.00 4.79
2534 2640 3.923645 ACTCCCACTCCCCCGACA 61.924 66.667 0.00 0.00 0.00 4.35
2535 2641 3.391382 CTCCCACTCCCCCGACAC 61.391 72.222 0.00 0.00 0.00 3.67
2536 2642 4.242586 TCCCACTCCCCCGACACA 62.243 66.667 0.00 0.00 0.00 3.72
2537 2643 3.246112 CCCACTCCCCCGACACAA 61.246 66.667 0.00 0.00 0.00 3.33
2538 2644 2.032071 CCACTCCCCCGACACAAC 59.968 66.667 0.00 0.00 0.00 3.32
2539 2645 2.032071 CACTCCCCCGACACAACC 59.968 66.667 0.00 0.00 0.00 3.77
2540 2646 3.622826 ACTCCCCCGACACAACCG 61.623 66.667 0.00 0.00 0.00 4.44
2550 2656 3.943034 CACAACCGCGACCGCAAA 61.943 61.111 8.23 0.00 42.06 3.68
2551 2657 3.645975 ACAACCGCGACCGCAAAG 61.646 61.111 8.23 5.02 42.06 2.77
2577 2683 4.109675 CGGCCCCGACCAAATCCT 62.110 66.667 0.00 0.00 42.83 3.24
2578 2684 2.359011 GGCCCCGACCAAATCCTT 59.641 61.111 0.00 0.00 0.00 3.36
2579 2685 1.753078 GGCCCCGACCAAATCCTTC 60.753 63.158 0.00 0.00 0.00 3.46
2580 2686 2.112815 GCCCCGACCAAATCCTTCG 61.113 63.158 0.00 0.00 0.00 3.79
2581 2687 1.298667 CCCCGACCAAATCCTTCGT 59.701 57.895 0.00 0.00 0.00 3.85
2582 2688 0.743345 CCCCGACCAAATCCTTCGTC 60.743 60.000 0.00 0.00 0.00 4.20
2583 2689 0.743345 CCCGACCAAATCCTTCGTCC 60.743 60.000 0.00 0.00 0.00 4.79
2584 2690 0.249398 CCGACCAAATCCTTCGTCCT 59.751 55.000 0.00 0.00 0.00 3.85
2585 2691 1.359848 CGACCAAATCCTTCGTCCTG 58.640 55.000 0.00 0.00 0.00 3.86
2586 2692 1.067142 CGACCAAATCCTTCGTCCTGA 60.067 52.381 0.00 0.00 0.00 3.86
2587 2693 2.347731 GACCAAATCCTTCGTCCTGAC 58.652 52.381 0.00 0.00 0.00 3.51
2588 2694 1.697432 ACCAAATCCTTCGTCCTGACA 59.303 47.619 0.00 0.00 0.00 3.58
2589 2695 2.076863 CCAAATCCTTCGTCCTGACAC 58.923 52.381 0.00 0.00 0.00 3.67
2590 2696 2.076863 CAAATCCTTCGTCCTGACACC 58.923 52.381 0.00 0.00 0.00 4.16
2591 2697 0.246635 AATCCTTCGTCCTGACACCG 59.753 55.000 0.00 0.00 0.00 4.94
2592 2698 1.605058 ATCCTTCGTCCTGACACCGG 61.605 60.000 0.00 0.00 0.00 5.28
2593 2699 2.432628 CTTCGTCCTGACACCGGC 60.433 66.667 0.00 0.00 0.00 6.13
2594 2700 3.220999 CTTCGTCCTGACACCGGCA 62.221 63.158 0.00 0.00 0.00 5.69
2595 2701 3.509137 TTCGTCCTGACACCGGCAC 62.509 63.158 0.00 0.00 0.00 5.01
2596 2702 4.293648 CGTCCTGACACCGGCACA 62.294 66.667 0.00 0.00 0.00 4.57
2597 2703 2.665185 GTCCTGACACCGGCACAC 60.665 66.667 0.00 0.00 0.00 3.82
2598 2704 2.842462 TCCTGACACCGGCACACT 60.842 61.111 0.00 0.00 0.00 3.55
2599 2705 2.357517 CCTGACACCGGCACACTC 60.358 66.667 0.00 0.00 0.00 3.51
2600 2706 2.734723 CTGACACCGGCACACTCG 60.735 66.667 0.00 0.00 0.00 4.18
2601 2707 3.499929 CTGACACCGGCACACTCGT 62.500 63.158 0.00 0.00 0.00 4.18
2602 2708 2.733593 GACACCGGCACACTCGTC 60.734 66.667 0.00 0.00 0.00 4.20
2603 2709 4.640855 ACACCGGCACACTCGTCG 62.641 66.667 0.00 0.00 0.00 5.12
2641 2747 4.215349 GCAGCTAGCTGGTCCAAG 57.785 61.111 38.52 17.69 43.77 3.61
2642 2748 1.451028 GCAGCTAGCTGGTCCAAGG 60.451 63.158 38.52 16.99 43.77 3.61
2643 2749 1.222936 CAGCTAGCTGGTCCAAGGG 59.777 63.158 33.06 7.65 40.17 3.95
2644 2750 2.124529 GCTAGCTGGTCCAAGGGC 60.125 66.667 7.70 0.00 0.00 5.19
2645 2751 2.187946 CTAGCTGGTCCAAGGGCG 59.812 66.667 0.00 0.00 0.00 6.13
2646 2752 3.391665 CTAGCTGGTCCAAGGGCGG 62.392 68.421 0.00 0.00 0.00 6.13
2662 2768 3.179939 GGCGCGACTCCTTTCGTC 61.180 66.667 12.10 0.00 41.26 4.20
2667 2773 2.506438 GACTCCTTTCGTCGGCCG 60.506 66.667 22.12 22.12 38.13 6.13
2668 2774 3.984200 GACTCCTTTCGTCGGCCGG 62.984 68.421 27.83 10.69 37.11 6.13
2672 2778 3.488090 CTTTCGTCGGCCGGCTTC 61.488 66.667 29.47 15.54 37.11 3.86
2673 2779 3.934391 CTTTCGTCGGCCGGCTTCT 62.934 63.158 29.47 0.00 37.11 2.85
2674 2780 3.524648 TTTCGTCGGCCGGCTTCTT 62.525 57.895 29.47 0.00 37.11 2.52
2675 2781 3.927163 TTCGTCGGCCGGCTTCTTC 62.927 63.158 29.47 8.15 37.11 2.87
2677 2783 4.736896 GTCGGCCGGCTTCTTCGT 62.737 66.667 28.56 0.00 0.00 3.85
2678 2784 4.430765 TCGGCCGGCTTCTTCGTC 62.431 66.667 28.56 5.59 0.00 4.20
2680 2786 4.430765 GGCCGGCTTCTTCGTCGA 62.431 66.667 28.56 0.00 0.00 4.20
2681 2787 3.179939 GCCGGCTTCTTCGTCGAC 61.180 66.667 22.15 5.18 0.00 4.20
2682 2788 2.874780 CCGGCTTCTTCGTCGACG 60.875 66.667 31.30 31.30 41.45 5.12
2683 2789 3.533691 CGGCTTCTTCGTCGACGC 61.534 66.667 32.19 17.04 39.60 5.19
2684 2790 3.179939 GGCTTCTTCGTCGACGCC 61.180 66.667 32.19 22.01 40.48 5.68
2685 2791 3.179939 GCTTCTTCGTCGACGCCC 61.180 66.667 32.19 12.38 39.60 6.13
2686 2792 2.874780 CTTCTTCGTCGACGCCCG 60.875 66.667 32.19 21.13 39.60 6.13
2690 2796 4.946266 TTCGTCGACGCCCGCAAA 62.946 61.111 32.19 17.52 39.60 3.68
2693 2799 4.072088 GTCGACGCCCGCAAACTG 62.072 66.667 0.00 0.00 38.37 3.16
2694 2800 4.595538 TCGACGCCCGCAAACTGT 62.596 61.111 0.00 0.00 38.37 3.55
2695 2801 3.645975 CGACGCCCGCAAACTGTT 61.646 61.111 0.00 0.00 0.00 3.16
2696 2802 2.251371 GACGCCCGCAAACTGTTC 59.749 61.111 0.00 0.00 0.00 3.18
2697 2803 3.573489 GACGCCCGCAAACTGTTCG 62.573 63.158 0.00 0.00 0.00 3.95
2698 2804 3.342627 CGCCCGCAAACTGTTCGA 61.343 61.111 3.53 0.00 0.00 3.71
2699 2805 2.251371 GCCCGCAAACTGTTCGAC 59.749 61.111 3.53 0.00 0.00 4.20
2700 2806 2.539338 GCCCGCAAACTGTTCGACA 61.539 57.895 3.53 0.00 0.00 4.35
2710 2816 2.389713 CTGTTCGACAGTTTGCCAAG 57.610 50.000 6.79 0.00 41.19 3.61
2711 2817 1.002468 CTGTTCGACAGTTTGCCAAGG 60.002 52.381 6.79 0.00 41.19 3.61
2712 2818 1.021968 GTTCGACAGTTTGCCAAGGT 58.978 50.000 0.00 0.00 0.00 3.50
2713 2819 2.215196 GTTCGACAGTTTGCCAAGGTA 58.785 47.619 0.00 0.00 0.00 3.08
2714 2820 1.873698 TCGACAGTTTGCCAAGGTAC 58.126 50.000 0.00 0.00 0.00 3.34
2715 2821 1.139256 TCGACAGTTTGCCAAGGTACA 59.861 47.619 0.00 0.00 0.00 2.90
2716 2822 1.944024 CGACAGTTTGCCAAGGTACAA 59.056 47.619 0.00 0.00 0.00 2.41
2717 2823 2.356382 CGACAGTTTGCCAAGGTACAAA 59.644 45.455 0.00 0.00 33.55 2.83
2718 2824 3.004315 CGACAGTTTGCCAAGGTACAAAT 59.996 43.478 0.00 0.00 38.01 2.32
2719 2825 4.499019 CGACAGTTTGCCAAGGTACAAATT 60.499 41.667 0.00 0.00 38.01 1.82
2720 2826 4.692228 ACAGTTTGCCAAGGTACAAATTG 58.308 39.130 8.75 8.75 44.42 2.32
2721 2827 4.442753 ACAGTTTGCCAAGGTACAAATTGG 60.443 41.667 15.71 15.71 43.66 3.16
2728 2834 2.109425 AGGTACAAATTGGACTCCGC 57.891 50.000 8.40 0.00 30.12 5.54
2729 2835 1.092348 GGTACAAATTGGACTCCGCC 58.908 55.000 8.40 0.00 30.12 6.13
2730 2836 0.725117 GTACAAATTGGACTCCGCCG 59.275 55.000 0.14 0.00 0.00 6.46
2731 2837 0.609151 TACAAATTGGACTCCGCCGA 59.391 50.000 0.00 0.00 0.00 5.54
2732 2838 0.953960 ACAAATTGGACTCCGCCGAC 60.954 55.000 0.00 0.00 0.00 4.79
2733 2839 1.740296 AAATTGGACTCCGCCGACG 60.740 57.895 0.00 0.00 39.67 5.12
2734 2840 2.162338 AAATTGGACTCCGCCGACGA 62.162 55.000 0.00 0.00 43.93 4.20
2735 2841 2.558554 AATTGGACTCCGCCGACGAG 62.559 60.000 0.00 0.00 43.93 4.18
2737 2843 3.745803 GGACTCCGCCGACGAGTT 61.746 66.667 0.00 0.00 43.93 3.01
2738 2844 2.202453 GACTCCGCCGACGAGTTC 60.202 66.667 0.00 0.00 43.93 3.01
2739 2845 2.672307 ACTCCGCCGACGAGTTCT 60.672 61.111 0.00 0.00 43.93 3.01
2740 2846 2.197643 GACTCCGCCGACGAGTTCTT 62.198 60.000 0.00 0.00 43.93 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.127682 AGCAAGTTCTTGTCTGTTCCAATTT 59.872 36.000 13.04 0.00 0.00 1.82
41 42 4.646492 AGCAAGTTCTTGTCTGTTCCAATT 59.354 37.500 13.04 0.00 0.00 2.32
42 43 4.210331 AGCAAGTTCTTGTCTGTTCCAAT 58.790 39.130 13.04 0.00 0.00 3.16
43 44 3.620488 AGCAAGTTCTTGTCTGTTCCAA 58.380 40.909 13.04 0.00 0.00 3.53
44 45 3.281727 AGCAAGTTCTTGTCTGTTCCA 57.718 42.857 13.04 0.00 0.00 3.53
45 46 3.243201 CCAAGCAAGTTCTTGTCTGTTCC 60.243 47.826 13.04 0.00 41.29 3.62
46 47 3.378427 ACCAAGCAAGTTCTTGTCTGTTC 59.622 43.478 13.04 0.00 41.29 3.18
47 48 3.356290 ACCAAGCAAGTTCTTGTCTGTT 58.644 40.909 13.04 0.00 41.29 3.16
73 74 4.350368 TCACTGCACAATTTGACCTCTA 57.650 40.909 2.79 0.00 0.00 2.43
78 79 6.645700 TTTCTTTTCACTGCACAATTTGAC 57.354 33.333 2.79 0.00 0.00 3.18
98 108 4.748102 TCCGTCTCTACACACAACAATTTC 59.252 41.667 0.00 0.00 0.00 2.17
109 119 0.452585 GCAGAGGTCCGTCTCTACAC 59.547 60.000 0.00 0.00 41.76 2.90
110 120 0.037734 TGCAGAGGTCCGTCTCTACA 59.962 55.000 0.00 0.00 41.76 2.74
116 126 2.179517 CGTCTGCAGAGGTCCGTC 59.820 66.667 24.86 8.07 0.00 4.79
482 492 7.636326 ACTGTACATTTTTAAGGCGTATATGC 58.364 34.615 8.51 8.51 0.00 3.14
483 493 9.997482 AAACTGTACATTTTTAAGGCGTATATG 57.003 29.630 5.43 0.00 0.00 1.78
486 496 9.187455 CAAAAACTGTACATTTTTAAGGCGTAT 57.813 29.630 20.30 3.97 37.19 3.06
487 497 8.404000 TCAAAAACTGTACATTTTTAAGGCGTA 58.596 29.630 20.30 3.05 37.19 4.42
488 498 7.259161 TCAAAAACTGTACATTTTTAAGGCGT 58.741 30.769 20.30 5.17 37.19 5.68
489 499 7.687005 TCAAAAACTGTACATTTTTAAGGCG 57.313 32.000 20.30 11.47 37.19 5.52
490 500 8.547894 CCTTCAAAAACTGTACATTTTTAAGGC 58.452 33.333 24.96 0.00 37.19 4.35
491 501 9.810545 TCCTTCAAAAACTGTACATTTTTAAGG 57.189 29.630 27.53 27.53 37.19 2.69
493 503 9.308318 GCTCCTTCAAAAACTGTACATTTTTAA 57.692 29.630 20.30 12.87 37.19 1.52
495 505 7.327214 TGCTCCTTCAAAAACTGTACATTTTT 58.673 30.769 15.86 15.86 39.30 1.94
499 509 6.463995 TTTGCTCCTTCAAAAACTGTACAT 57.536 33.333 0.00 0.00 33.47 2.29
500 510 5.906113 TTTGCTCCTTCAAAAACTGTACA 57.094 34.783 0.00 0.00 33.47 2.90
501 511 8.865590 TTAATTTGCTCCTTCAAAAACTGTAC 57.134 30.769 0.00 0.00 39.13 2.90
502 512 9.308318 GTTTAATTTGCTCCTTCAAAAACTGTA 57.692 29.630 0.00 0.00 39.13 2.74
503 513 8.040727 AGTTTAATTTGCTCCTTCAAAAACTGT 58.959 29.630 0.00 0.00 39.13 3.55
506 516 8.116136 CACAGTTTAATTTGCTCCTTCAAAAAC 58.884 33.333 0.00 0.00 39.13 2.43
534 547 3.326210 GAAGGCGCGCGAGATCTG 61.326 66.667 37.18 2.07 0.00 2.90
535 548 4.914420 CGAAGGCGCGCGAGATCT 62.914 66.667 37.18 20.83 0.00 2.75
547 560 4.864806 ACATGCATATATAAGACGCGAAGG 59.135 41.667 15.93 0.00 0.00 3.46
548 561 5.220284 CCACATGCATATATAAGACGCGAAG 60.220 44.000 15.93 0.00 0.00 3.79
550 563 4.173256 CCACATGCATATATAAGACGCGA 58.827 43.478 15.93 0.00 0.00 5.87
554 567 5.807520 CGAGACCCACATGCATATATAAGAC 59.192 44.000 0.00 0.00 0.00 3.01
555 568 5.480422 ACGAGACCCACATGCATATATAAGA 59.520 40.000 0.00 0.00 0.00 2.10
575 588 4.978083 AACCACACTAGGTATACACGAG 57.022 45.455 5.01 3.02 42.25 4.18
576 589 6.179756 TCTTAACCACACTAGGTATACACGA 58.820 40.000 5.01 0.00 42.25 4.35
577 590 6.441093 TCTTAACCACACTAGGTATACACG 57.559 41.667 5.01 0.00 42.25 4.49
579 592 8.370266 ACATTCTTAACCACACTAGGTATACA 57.630 34.615 5.01 0.00 42.25 2.29
581 594 9.880157 GAAACATTCTTAACCACACTAGGTATA 57.120 33.333 0.00 0.00 42.25 1.47
583 596 7.737869 TGAAACATTCTTAACCACACTAGGTA 58.262 34.615 0.00 0.00 42.25 3.08
584 597 6.597562 TGAAACATTCTTAACCACACTAGGT 58.402 36.000 0.00 0.00 45.91 3.08
585 598 6.149474 CCTGAAACATTCTTAACCACACTAGG 59.851 42.308 0.00 0.00 0.00 3.02
788 828 2.427506 GGTCAACTTCTCGCCAAATCT 58.572 47.619 0.00 0.00 0.00 2.40
813 853 1.881324 TGTCCATATGCATTCGCCATG 59.119 47.619 3.54 1.46 37.32 3.66
884 930 2.128035 GTTCTTGACACTGACAGACCG 58.872 52.381 10.08 0.00 0.00 4.79
931 977 1.442769 CACTGGGAATGGTCAGTTCG 58.557 55.000 0.00 0.00 41.71 3.95
934 980 1.380302 GGCACTGGGAATGGTCAGT 59.620 57.895 0.00 0.00 44.12 3.41
943 989 1.836999 AACTATGCGTGGCACTGGGA 61.837 55.000 16.72 2.29 43.04 4.37
944 990 1.369091 GAACTATGCGTGGCACTGGG 61.369 60.000 16.72 0.93 43.04 4.45
958 1006 0.742990 CCCCTTTGATGCGCGAACTA 60.743 55.000 12.10 0.00 0.00 2.24
976 1024 1.873591 ACTTGTTGTGATTCGTGCTCC 59.126 47.619 0.00 0.00 0.00 4.70
980 1028 3.961477 TTGGACTTGTTGTGATTCGTG 57.039 42.857 0.00 0.00 0.00 4.35
982 1030 3.366273 CCCATTGGACTTGTTGTGATTCG 60.366 47.826 3.62 0.00 0.00 3.34
987 1035 1.270550 GCTCCCATTGGACTTGTTGTG 59.729 52.381 3.62 0.00 35.03 3.33
1010 1058 2.795389 GCCGACACGCCGTTATGAC 61.795 63.158 0.00 0.00 0.00 3.06
1404 1491 3.605486 ACGACGTTATTTTCTACTCGTGC 59.395 43.478 0.00 0.00 31.73 5.34
1562 1660 0.454600 TCCGATTAGCTCACCGTCAC 59.545 55.000 0.00 0.00 0.00 3.67
1667 1765 0.975040 TCTCCTTCCTGCTCCTGCTC 60.975 60.000 0.00 0.00 40.48 4.26
1668 1766 0.546267 TTCTCCTTCCTGCTCCTGCT 60.546 55.000 0.00 0.00 40.48 4.24
1669 1767 0.107752 CTTCTCCTTCCTGCTCCTGC 60.108 60.000 0.00 0.00 40.20 4.85
1670 1768 1.206849 GACTTCTCCTTCCTGCTCCTG 59.793 57.143 0.00 0.00 0.00 3.86
1671 1769 1.078656 AGACTTCTCCTTCCTGCTCCT 59.921 52.381 0.00 0.00 0.00 3.69
1672 1770 1.206849 CAGACTTCTCCTTCCTGCTCC 59.793 57.143 0.00 0.00 0.00 4.70
1765 1863 4.168014 TGTGTCCGATCGTACATTTACAC 58.832 43.478 16.84 15.45 37.18 2.90
1770 1876 1.203758 TGCTGTGTCCGATCGTACATT 59.796 47.619 16.84 0.00 0.00 2.71
1771 1877 0.815095 TGCTGTGTCCGATCGTACAT 59.185 50.000 16.84 0.00 0.00 2.29
1773 1879 0.450583 TCTGCTGTGTCCGATCGTAC 59.549 55.000 15.09 9.39 0.00 3.67
1774 1880 0.733150 CTCTGCTGTGTCCGATCGTA 59.267 55.000 15.09 0.00 0.00 3.43
1775 1881 0.960861 TCTCTGCTGTGTCCGATCGT 60.961 55.000 15.09 0.00 0.00 3.73
1776 1882 0.524392 GTCTCTGCTGTGTCCGATCG 60.524 60.000 8.51 8.51 0.00 3.69
1777 1883 0.179124 GGTCTCTGCTGTGTCCGATC 60.179 60.000 0.00 0.00 0.00 3.69
1778 1884 1.893786 GGTCTCTGCTGTGTCCGAT 59.106 57.895 0.00 0.00 0.00 4.18
1779 1885 2.626780 CGGTCTCTGCTGTGTCCGA 61.627 63.158 20.51 0.00 39.45 4.55
1780 1886 2.126307 CGGTCTCTGCTGTGTCCG 60.126 66.667 14.40 14.40 33.76 4.79
1781 1887 1.214062 CTCGGTCTCTGCTGTGTCC 59.786 63.158 0.11 0.11 0.00 4.02
1794 1900 1.190178 AAGCTTAACGGGGTCTCGGT 61.190 55.000 0.00 0.00 0.00 4.69
1828 1934 5.918426 TCATTCATTCAAGCCATGCTAAA 57.082 34.783 0.00 0.00 38.25 1.85
1848 1954 1.993391 GACTCCCCGTTCCCCATCA 60.993 63.158 0.00 0.00 0.00 3.07
1850 1956 1.689582 GAGACTCCCCGTTCCCCAT 60.690 63.158 0.00 0.00 0.00 4.00
1863 1969 1.070758 AGTGCAATGACCAACGAGACT 59.929 47.619 0.00 0.00 0.00 3.24
1864 1970 1.461127 GAGTGCAATGACCAACGAGAC 59.539 52.381 0.00 0.00 0.00 3.36
1879 1985 1.741770 CCGTTAGTGCCCTGAGTGC 60.742 63.158 0.00 0.00 0.00 4.40
1880 1986 1.741770 GCCGTTAGTGCCCTGAGTG 60.742 63.158 0.00 0.00 0.00 3.51
1881 1987 1.764571 TTGCCGTTAGTGCCCTGAGT 61.765 55.000 0.00 0.00 0.00 3.41
1882 1988 1.003839 TTGCCGTTAGTGCCCTGAG 60.004 57.895 0.00 0.00 0.00 3.35
1883 1989 1.302192 GTTGCCGTTAGTGCCCTGA 60.302 57.895 0.00 0.00 0.00 3.86
1884 1990 1.298859 GAGTTGCCGTTAGTGCCCTG 61.299 60.000 0.00 0.00 0.00 4.45
1885 1991 1.003718 GAGTTGCCGTTAGTGCCCT 60.004 57.895 0.00 0.00 0.00 5.19
1886 1992 2.038837 GGAGTTGCCGTTAGTGCCC 61.039 63.158 0.00 0.00 0.00 5.36
1887 1993 0.887387 TTGGAGTTGCCGTTAGTGCC 60.887 55.000 0.00 0.00 40.66 5.01
1888 1994 0.237498 GTTGGAGTTGCCGTTAGTGC 59.763 55.000 0.00 0.00 40.66 4.40
1889 1995 0.511221 CGTTGGAGTTGCCGTTAGTG 59.489 55.000 0.00 0.00 40.66 2.74
1890 1996 1.226030 GCGTTGGAGTTGCCGTTAGT 61.226 55.000 0.00 0.00 40.66 2.24
1891 1997 1.495951 GCGTTGGAGTTGCCGTTAG 59.504 57.895 0.00 0.00 40.66 2.34
1892 1998 2.311701 CGCGTTGGAGTTGCCGTTA 61.312 57.895 0.00 0.00 40.66 3.18
1893 1999 3.645975 CGCGTTGGAGTTGCCGTT 61.646 61.111 0.00 0.00 40.66 4.44
1894 2000 4.903010 ACGCGTTGGAGTTGCCGT 62.903 61.111 5.58 0.00 40.66 5.68
1895 2001 3.645975 AACGCGTTGGAGTTGCCG 61.646 61.111 26.00 0.00 40.66 5.69
1896 2002 2.051345 CAACGCGTTGGAGTTGCC 60.051 61.111 37.79 0.00 44.82 4.52
1899 2005 1.890510 GGGTCAACGCGTTGGAGTT 60.891 57.895 41.79 12.79 40.78 3.01
1900 2006 2.280592 GGGTCAACGCGTTGGAGT 60.281 61.111 41.79 13.60 40.78 3.85
1901 2007 1.234615 AATGGGTCAACGCGTTGGAG 61.235 55.000 41.79 23.96 40.78 3.86
1902 2008 0.820074 AAATGGGTCAACGCGTTGGA 60.820 50.000 41.79 28.89 40.78 3.53
1903 2009 0.386731 GAAATGGGTCAACGCGTTGG 60.387 55.000 41.79 27.36 40.78 3.77
1904 2010 0.724453 CGAAATGGGTCAACGCGTTG 60.724 55.000 39.16 39.16 41.71 4.10
1905 2011 1.161563 ACGAAATGGGTCAACGCGTT 61.162 50.000 20.79 20.79 39.31 4.84
1906 2012 1.562575 GACGAAATGGGTCAACGCGT 61.563 55.000 5.58 5.58 34.56 6.01
1907 2013 1.131826 GACGAAATGGGTCAACGCG 59.868 57.895 3.53 3.53 34.56 6.01
1908 2014 0.165944 CAGACGAAATGGGTCAACGC 59.834 55.000 0.00 0.00 36.87 4.84
1909 2015 0.165944 GCAGACGAAATGGGTCAACG 59.834 55.000 0.00 0.00 36.87 4.10
1910 2016 0.165944 CGCAGACGAAATGGGTCAAC 59.834 55.000 0.00 0.00 43.93 3.18
1911 2017 0.250124 ACGCAGACGAAATGGGTCAA 60.250 50.000 0.00 0.00 43.93 3.18
1912 2018 0.948623 CACGCAGACGAAATGGGTCA 60.949 55.000 0.00 0.00 41.36 4.02
1913 2019 1.787847 CACGCAGACGAAATGGGTC 59.212 57.895 0.00 0.00 41.36 4.46
1914 2020 2.325082 GCACGCAGACGAAATGGGT 61.325 57.895 0.00 0.00 43.78 4.51
1915 2021 2.480555 GCACGCAGACGAAATGGG 59.519 61.111 0.00 0.00 43.93 4.00
1916 2022 2.096406 CGCACGCAGACGAAATGG 59.904 61.111 0.00 0.00 43.93 3.16
1917 2023 1.225475 GACGCACGCAGACGAAATG 60.225 57.895 0.00 0.00 43.93 2.32
1918 2024 2.380410 GGACGCACGCAGACGAAAT 61.380 57.895 0.00 0.00 43.93 2.17
1919 2025 3.033764 GGACGCACGCAGACGAAA 61.034 61.111 0.00 0.00 43.93 3.46
1923 2029 1.550659 TTAAACGGACGCACGCAGAC 61.551 55.000 0.00 0.00 37.37 3.51
1924 2030 0.875040 TTTAAACGGACGCACGCAGA 60.875 50.000 0.00 0.00 37.37 4.26
1925 2031 0.165079 ATTTAAACGGACGCACGCAG 59.835 50.000 0.00 0.00 37.37 5.18
1926 2032 0.164217 GATTTAAACGGACGCACGCA 59.836 50.000 0.00 0.00 37.37 5.24
1927 2033 0.850391 CGATTTAAACGGACGCACGC 60.850 55.000 0.00 0.00 37.37 5.34
1928 2034 3.177468 CGATTTAAACGGACGCACG 57.823 52.632 0.00 0.00 40.31 5.34
1936 2042 1.177330 CGAACGCGCCGATTTAAACG 61.177 55.000 15.09 0.00 0.00 3.60
1937 2043 0.854445 CCGAACGCGCCGATTTAAAC 60.854 55.000 20.63 0.00 35.83 2.01
1938 2044 1.290491 ACCGAACGCGCCGATTTAAA 61.290 50.000 20.63 0.00 35.83 1.52
1939 2045 1.685640 GACCGAACGCGCCGATTTAA 61.686 55.000 20.63 0.00 35.83 1.52
1940 2046 2.125991 ACCGAACGCGCCGATTTA 60.126 55.556 20.63 0.00 35.83 1.40
1941 2047 3.484547 GACCGAACGCGCCGATTT 61.485 61.111 20.63 0.47 35.83 2.17
1951 2057 4.651008 TGTCCACGCCGACCGAAC 62.651 66.667 0.00 0.00 41.02 3.95
1952 2058 2.919960 TTTTGTCCACGCCGACCGAA 62.920 55.000 0.00 0.00 41.02 4.30
1953 2059 2.919960 TTTTTGTCCACGCCGACCGA 62.920 55.000 0.00 0.00 41.02 4.69
1954 2060 2.535788 TTTTTGTCCACGCCGACCG 61.536 57.895 0.00 0.00 44.21 4.79
1955 2061 3.423179 TTTTTGTCCACGCCGACC 58.577 55.556 0.00 0.00 31.35 4.79
1970 2076 1.331138 TCGACGCGTTTGACCATTTTT 59.669 42.857 15.53 0.00 0.00 1.94
1971 2077 0.938713 TCGACGCGTTTGACCATTTT 59.061 45.000 15.53 0.00 0.00 1.82
1972 2078 1.127951 GATCGACGCGTTTGACCATTT 59.872 47.619 15.53 0.00 0.00 2.32
1973 2079 0.719465 GATCGACGCGTTTGACCATT 59.281 50.000 15.53 0.00 0.00 3.16
1974 2080 0.108804 AGATCGACGCGTTTGACCAT 60.109 50.000 15.53 0.00 0.00 3.55
1975 2081 0.522626 TAGATCGACGCGTTTGACCA 59.477 50.000 15.53 0.94 0.00 4.02
1976 2082 1.621107 TTAGATCGACGCGTTTGACC 58.379 50.000 15.53 5.86 0.00 4.02
1977 2083 3.541516 CCATTTAGATCGACGCGTTTGAC 60.542 47.826 15.53 9.61 0.00 3.18
1978 2084 2.601314 CCATTTAGATCGACGCGTTTGA 59.399 45.455 15.53 15.79 0.00 2.69
1979 2085 2.601314 TCCATTTAGATCGACGCGTTTG 59.399 45.455 15.53 9.97 0.00 2.93
1980 2086 2.601763 GTCCATTTAGATCGACGCGTTT 59.398 45.455 15.53 0.61 0.00 3.60
1981 2087 2.190981 GTCCATTTAGATCGACGCGTT 58.809 47.619 15.53 0.00 0.00 4.84
1982 2088 1.836383 GTCCATTTAGATCGACGCGT 58.164 50.000 13.85 13.85 0.00 6.01
1983 2089 0.770590 CGTCCATTTAGATCGACGCG 59.229 55.000 3.53 3.53 39.38 6.01
1984 2090 1.517276 CACGTCCATTTAGATCGACGC 59.483 52.381 12.24 0.00 46.48 5.19
1986 2092 1.517276 CGCACGTCCATTTAGATCGAC 59.483 52.381 0.00 0.00 0.00 4.20
1987 2093 1.133598 ACGCACGTCCATTTAGATCGA 59.866 47.619 0.00 0.00 0.00 3.59
1988 2094 1.517276 GACGCACGTCCATTTAGATCG 59.483 52.381 12.04 0.00 39.08 3.69
1999 2105 1.897398 ATGAAAAGCGGACGCACGTC 61.897 55.000 19.48 14.58 44.88 4.34
2000 2106 1.897398 GATGAAAAGCGGACGCACGT 61.897 55.000 19.48 8.28 44.88 4.49
2001 2107 1.225745 GATGAAAAGCGGACGCACG 60.226 57.895 19.48 0.00 44.88 5.34
2002 2108 1.134694 GGATGAAAAGCGGACGCAC 59.865 57.895 19.48 7.70 44.88 5.34
2003 2109 2.387445 CGGATGAAAAGCGGACGCA 61.387 57.895 19.48 0.00 44.88 5.24
2004 2110 2.399611 CGGATGAAAAGCGGACGC 59.600 61.111 8.91 8.91 42.33 5.19
2005 2111 2.399611 GCGGATGAAAAGCGGACG 59.600 61.111 0.00 0.00 0.00 4.79
2006 2112 1.745489 AGGCGGATGAAAAGCGGAC 60.745 57.895 0.00 0.00 0.00 4.79
2007 2113 1.745115 CAGGCGGATGAAAAGCGGA 60.745 57.895 0.00 0.00 0.00 5.54
2008 2114 2.793946 CAGGCGGATGAAAAGCGG 59.206 61.111 0.00 0.00 0.00 5.52
2009 2115 2.100991 GCAGGCGGATGAAAAGCG 59.899 61.111 0.00 0.00 0.00 4.68
2010 2116 2.491621 GGCAGGCGGATGAAAAGC 59.508 61.111 0.00 0.00 0.00 3.51
2011 2117 1.745115 TCGGCAGGCGGATGAAAAG 60.745 57.895 17.49 0.00 0.00 2.27
2012 2118 2.038269 GTCGGCAGGCGGATGAAAA 61.038 57.895 17.49 0.00 0.00 2.29
2013 2119 2.435938 GTCGGCAGGCGGATGAAA 60.436 61.111 17.49 0.00 0.00 2.69
2014 2120 2.852495 GAAGTCGGCAGGCGGATGAA 62.852 60.000 17.49 0.00 0.00 2.57
2015 2121 3.371097 GAAGTCGGCAGGCGGATGA 62.371 63.158 17.49 0.00 0.00 2.92
2016 2122 2.892425 GAAGTCGGCAGGCGGATG 60.892 66.667 17.49 0.00 0.00 3.51
2017 2123 4.162690 GGAAGTCGGCAGGCGGAT 62.163 66.667 17.49 2.19 0.00 4.18
2025 2131 1.751437 AAATAAGCCTGGAAGTCGGC 58.249 50.000 0.00 0.00 46.65 5.54
2026 2132 5.676331 GCTTAAAAATAAGCCTGGAAGTCGG 60.676 44.000 8.96 0.00 44.85 4.79
2027 2133 5.332707 GCTTAAAAATAAGCCTGGAAGTCG 58.667 41.667 8.96 0.00 44.85 4.18
2038 2144 6.074888 CGATGCAAATCCGGCTTAAAAATAAG 60.075 38.462 0.00 0.00 0.00 1.73
2039 2145 5.746245 CGATGCAAATCCGGCTTAAAAATAA 59.254 36.000 0.00 0.00 0.00 1.40
2040 2146 5.277825 CGATGCAAATCCGGCTTAAAAATA 58.722 37.500 0.00 0.00 0.00 1.40
2041 2147 4.111916 CGATGCAAATCCGGCTTAAAAAT 58.888 39.130 0.00 0.00 0.00 1.82
2042 2148 3.506810 CGATGCAAATCCGGCTTAAAAA 58.493 40.909 0.00 0.00 0.00 1.94
2043 2149 2.159310 CCGATGCAAATCCGGCTTAAAA 60.159 45.455 0.00 0.00 36.62 1.52
2044 2150 1.403679 CCGATGCAAATCCGGCTTAAA 59.596 47.619 0.00 0.00 36.62 1.52
2045 2151 1.021202 CCGATGCAAATCCGGCTTAA 58.979 50.000 0.00 0.00 36.62 1.85
2046 2152 2.701587 CCGATGCAAATCCGGCTTA 58.298 52.632 0.00 0.00 36.62 3.09
2047 2153 3.513225 CCGATGCAAATCCGGCTT 58.487 55.556 0.00 0.00 36.62 4.35
2050 2156 4.612536 GCGCCGATGCAAATCCGG 62.613 66.667 13.53 13.53 45.51 5.14
2051 2157 3.795280 CTGCGCCGATGCAAATCCG 62.795 63.158 4.18 0.00 45.74 4.18
2052 2158 2.025156 CTGCGCCGATGCAAATCC 59.975 61.111 4.18 0.00 45.74 3.01
2053 2159 1.297893 GTCTGCGCCGATGCAAATC 60.298 57.895 4.18 0.00 45.74 2.17
2054 2160 2.039974 TGTCTGCGCCGATGCAAAT 61.040 52.632 4.18 0.00 45.74 2.32
2055 2161 2.667874 TGTCTGCGCCGATGCAAA 60.668 55.556 4.18 0.00 45.74 3.68
2056 2162 3.422303 GTGTCTGCGCCGATGCAA 61.422 61.111 4.18 0.00 45.74 4.08
2059 2165 3.250323 CTCGTGTCTGCGCCGATG 61.250 66.667 4.18 0.00 0.00 3.84
2060 2166 3.440415 TCTCGTGTCTGCGCCGAT 61.440 61.111 4.18 0.00 0.00 4.18
2061 2167 4.400109 GTCTCGTGTCTGCGCCGA 62.400 66.667 4.18 0.00 0.00 5.54
2064 2170 4.400109 TCCGTCTCGTGTCTGCGC 62.400 66.667 0.00 0.00 0.00 6.09
2065 2171 2.502080 GTCCGTCTCGTGTCTGCG 60.502 66.667 0.00 0.00 0.00 5.18
2066 2172 2.502080 CGTCCGTCTCGTGTCTGC 60.502 66.667 0.00 0.00 0.00 4.26
2067 2173 2.502080 GCGTCCGTCTCGTGTCTG 60.502 66.667 0.00 0.00 0.00 3.51
2068 2174 2.976350 TGCGTCCGTCTCGTGTCT 60.976 61.111 0.00 0.00 0.00 3.41
2069 2175 2.799916 GTGCGTCCGTCTCGTGTC 60.800 66.667 0.00 0.00 0.00 3.67
2070 2176 4.678269 CGTGCGTCCGTCTCGTGT 62.678 66.667 0.00 0.00 0.00 4.49
2088 2194 3.140225 GAAGGAGTAGGCGGGCGAG 62.140 68.421 0.00 0.00 0.00 5.03
2089 2195 3.145551 GAAGGAGTAGGCGGGCGA 61.146 66.667 0.00 0.00 0.00 5.54
2090 2196 4.222847 GGAAGGAGTAGGCGGGCG 62.223 72.222 0.00 0.00 0.00 6.13
2091 2197 3.081409 TGGAAGGAGTAGGCGGGC 61.081 66.667 0.00 0.00 0.00 6.13
2092 2198 1.686110 AGTGGAAGGAGTAGGCGGG 60.686 63.158 0.00 0.00 0.00 6.13
2093 2199 1.517832 CAGTGGAAGGAGTAGGCGG 59.482 63.158 0.00 0.00 0.00 6.13
2094 2200 1.517832 CCAGTGGAAGGAGTAGGCG 59.482 63.158 1.68 0.00 0.00 5.52
2095 2201 1.222113 GCCAGTGGAAGGAGTAGGC 59.778 63.158 15.20 0.00 0.00 3.93
2096 2202 0.827368 GAGCCAGTGGAAGGAGTAGG 59.173 60.000 15.20 0.00 0.00 3.18
2097 2203 0.457851 CGAGCCAGTGGAAGGAGTAG 59.542 60.000 15.20 0.00 0.00 2.57
2098 2204 1.605058 GCGAGCCAGTGGAAGGAGTA 61.605 60.000 15.20 0.00 0.00 2.59
2099 2205 2.948720 GCGAGCCAGTGGAAGGAGT 61.949 63.158 15.20 0.00 0.00 3.85
2100 2206 2.125350 GCGAGCCAGTGGAAGGAG 60.125 66.667 15.20 0.00 0.00 3.69
2101 2207 2.604686 AGCGAGCCAGTGGAAGGA 60.605 61.111 15.20 0.00 0.00 3.36
2102 2208 2.125350 GAGCGAGCCAGTGGAAGG 60.125 66.667 15.20 0.92 0.00 3.46
2103 2209 2.507992 CGAGCGAGCCAGTGGAAG 60.508 66.667 15.20 3.81 0.00 3.46
2104 2210 3.282745 GACGAGCGAGCCAGTGGAA 62.283 63.158 15.20 0.00 0.00 3.53
2105 2211 3.749064 GACGAGCGAGCCAGTGGA 61.749 66.667 15.20 0.00 0.00 4.02
2116 2222 2.742372 AATGTGCCACCGACGAGC 60.742 61.111 0.00 0.00 0.00 5.03
2117 2223 2.390599 CCAATGTGCCACCGACGAG 61.391 63.158 0.00 0.00 0.00 4.18
2118 2224 2.358125 CCAATGTGCCACCGACGA 60.358 61.111 0.00 0.00 0.00 4.20
2119 2225 2.668212 ACCAATGTGCCACCGACG 60.668 61.111 0.00 0.00 0.00 5.12
2120 2226 0.960364 ATGACCAATGTGCCACCGAC 60.960 55.000 0.00 0.00 0.00 4.79
2121 2227 0.676466 GATGACCAATGTGCCACCGA 60.676 55.000 0.00 0.00 0.00 4.69
2122 2228 1.656818 GGATGACCAATGTGCCACCG 61.657 60.000 0.00 0.00 35.97 4.94
2123 2229 0.323725 AGGATGACCAATGTGCCACC 60.324 55.000 0.00 0.00 38.94 4.61
2124 2230 1.098050 GAGGATGACCAATGTGCCAC 58.902 55.000 0.00 0.00 38.94 5.01
2125 2231 0.994247 AGAGGATGACCAATGTGCCA 59.006 50.000 0.00 0.00 38.94 4.92
2126 2232 1.673168 GAGAGGATGACCAATGTGCC 58.327 55.000 0.00 0.00 38.94 5.01
2127 2233 1.673168 GGAGAGGATGACCAATGTGC 58.327 55.000 0.00 0.00 38.94 4.57
2128 2234 1.561076 TGGGAGAGGATGACCAATGTG 59.439 52.381 0.00 0.00 38.94 3.21
2129 2235 1.971149 TGGGAGAGGATGACCAATGT 58.029 50.000 0.00 0.00 38.94 2.71
2130 2236 3.484407 GAATGGGAGAGGATGACCAATG 58.516 50.000 0.00 0.00 36.44 2.82
2131 2237 2.444766 GGAATGGGAGAGGATGACCAAT 59.555 50.000 0.00 0.00 36.44 3.16
2132 2238 1.846439 GGAATGGGAGAGGATGACCAA 59.154 52.381 0.00 0.00 36.44 3.67
2133 2239 1.274358 TGGAATGGGAGAGGATGACCA 60.274 52.381 0.00 0.00 38.94 4.02
2134 2240 1.511613 TGGAATGGGAGAGGATGACC 58.488 55.000 0.00 0.00 0.00 4.02
2135 2241 2.239654 TGTTGGAATGGGAGAGGATGAC 59.760 50.000 0.00 0.00 0.00 3.06
2136 2242 2.507058 CTGTTGGAATGGGAGAGGATGA 59.493 50.000 0.00 0.00 0.00 2.92
2137 2243 2.928334 CTGTTGGAATGGGAGAGGATG 58.072 52.381 0.00 0.00 0.00 3.51
2138 2244 1.213926 GCTGTTGGAATGGGAGAGGAT 59.786 52.381 0.00 0.00 0.00 3.24
2139 2245 0.620556 GCTGTTGGAATGGGAGAGGA 59.379 55.000 0.00 0.00 0.00 3.71
2140 2246 0.329261 TGCTGTTGGAATGGGAGAGG 59.671 55.000 0.00 0.00 0.00 3.69
2141 2247 2.205022 TTGCTGTTGGAATGGGAGAG 57.795 50.000 0.00 0.00 0.00 3.20
2142 2248 2.238521 GTTTGCTGTTGGAATGGGAGA 58.761 47.619 0.00 0.00 0.00 3.71
2143 2249 1.273327 GGTTTGCTGTTGGAATGGGAG 59.727 52.381 0.00 0.00 0.00 4.30
2144 2250 1.337118 GGTTTGCTGTTGGAATGGGA 58.663 50.000 0.00 0.00 0.00 4.37
2145 2251 0.321346 GGGTTTGCTGTTGGAATGGG 59.679 55.000 0.00 0.00 0.00 4.00
2146 2252 0.321346 GGGGTTTGCTGTTGGAATGG 59.679 55.000 0.00 0.00 0.00 3.16
2147 2253 0.321346 GGGGGTTTGCTGTTGGAATG 59.679 55.000 0.00 0.00 0.00 2.67
2148 2254 1.184970 CGGGGGTTTGCTGTTGGAAT 61.185 55.000 0.00 0.00 0.00 3.01
2149 2255 1.830408 CGGGGGTTTGCTGTTGGAA 60.830 57.895 0.00 0.00 0.00 3.53
2150 2256 2.203422 CGGGGGTTTGCTGTTGGA 60.203 61.111 0.00 0.00 0.00 3.53
2151 2257 3.989787 GCGGGGGTTTGCTGTTGG 61.990 66.667 0.00 0.00 0.00 3.77
2152 2258 3.989787 GGCGGGGGTTTGCTGTTG 61.990 66.667 0.00 0.00 0.00 3.33
2153 2259 4.218686 AGGCGGGGGTTTGCTGTT 62.219 61.111 0.00 0.00 0.00 3.16
2154 2260 4.974721 CAGGCGGGGGTTTGCTGT 62.975 66.667 0.00 0.00 0.00 4.40
2158 2264 4.994756 AAGGCAGGCGGGGGTTTG 62.995 66.667 0.00 0.00 0.00 2.93
2159 2265 4.678743 GAAGGCAGGCGGGGGTTT 62.679 66.667 0.00 0.00 0.00 3.27
2162 2268 4.803908 GAAGAAGGCAGGCGGGGG 62.804 72.222 0.00 0.00 0.00 5.40
2163 2269 3.350031 ATGAAGAAGGCAGGCGGGG 62.350 63.158 0.00 0.00 0.00 5.73
2164 2270 1.821332 GATGAAGAAGGCAGGCGGG 60.821 63.158 0.00 0.00 0.00 6.13
2165 2271 2.176273 CGATGAAGAAGGCAGGCGG 61.176 63.158 0.00 0.00 0.00 6.13
2166 2272 1.021390 AACGATGAAGAAGGCAGGCG 61.021 55.000 0.00 0.00 0.00 5.52
2167 2273 0.449388 CAACGATGAAGAAGGCAGGC 59.551 55.000 0.00 0.00 0.00 4.85
2168 2274 2.099141 TCAACGATGAAGAAGGCAGG 57.901 50.000 0.00 0.00 30.99 4.85
2169 2275 3.005554 ACATCAACGATGAAGAAGGCAG 58.994 45.455 10.81 0.00 42.09 4.85
2170 2276 3.002791 GACATCAACGATGAAGAAGGCA 58.997 45.455 10.81 0.00 42.09 4.75
2171 2277 2.029728 CGACATCAACGATGAAGAAGGC 59.970 50.000 10.81 0.00 42.09 4.35
2172 2278 2.029728 GCGACATCAACGATGAAGAAGG 59.970 50.000 10.81 0.00 42.09 3.46
2173 2279 2.029728 GGCGACATCAACGATGAAGAAG 59.970 50.000 10.81 0.00 42.09 2.85
2174 2280 1.999735 GGCGACATCAACGATGAAGAA 59.000 47.619 10.81 0.00 42.09 2.52
2175 2281 1.640428 GGCGACATCAACGATGAAGA 58.360 50.000 10.81 0.00 42.09 2.87
2176 2282 0.298707 CGGCGACATCAACGATGAAG 59.701 55.000 0.00 0.00 42.09 3.02
2177 2283 1.692148 GCGGCGACATCAACGATGAA 61.692 55.000 12.98 0.00 42.09 2.57
2178 2284 2.164663 GCGGCGACATCAACGATGA 61.165 57.895 12.98 0.00 42.09 2.92
2179 2285 2.321060 GCGGCGACATCAACGATG 59.679 61.111 12.98 2.45 44.71 3.84
2180 2286 2.890474 GGCGGCGACATCAACGAT 60.890 61.111 12.98 0.00 0.00 3.73
2183 2289 1.933115 AAATGGGCGGCGACATCAAC 61.933 55.000 17.61 0.00 0.00 3.18
2184 2290 1.247419 AAAATGGGCGGCGACATCAA 61.247 50.000 17.61 0.00 0.00 2.57
2185 2291 1.247419 AAAAATGGGCGGCGACATCA 61.247 50.000 17.61 4.11 0.00 3.07
2186 2292 1.510844 AAAAATGGGCGGCGACATC 59.489 52.632 17.61 0.00 0.00 3.06
2187 2293 3.693411 AAAAATGGGCGGCGACAT 58.307 50.000 17.61 13.63 0.00 3.06
2201 2307 1.152860 TGGCAGAGGCACCGAAAAA 60.153 52.632 0.00 0.00 43.71 1.94
2202 2308 1.600636 CTGGCAGAGGCACCGAAAA 60.601 57.895 9.42 0.00 43.71 2.29
2203 2309 2.032528 CTGGCAGAGGCACCGAAA 59.967 61.111 9.42 0.00 43.71 3.46
2204 2310 4.704833 GCTGGCAGAGGCACCGAA 62.705 66.667 20.86 0.00 43.71 4.30
2475 2581 4.778143 AAGACGATGGTGGCGGGC 62.778 66.667 0.00 0.00 0.00 6.13
2476 2582 2.819595 CAAGACGATGGTGGCGGG 60.820 66.667 0.00 0.00 0.00 6.13
2477 2583 2.047274 ACAAGACGATGGTGGCGG 60.047 61.111 0.00 0.00 0.00 6.13
2478 2584 2.444624 CGACAAGACGATGGTGGCG 61.445 63.158 0.00 0.00 37.46 5.69
2479 2585 2.740714 GCGACAAGACGATGGTGGC 61.741 63.158 0.00 0.00 35.09 5.01
2480 2586 2.100631 GGCGACAAGACGATGGTGG 61.101 63.158 0.00 0.00 35.09 4.61
2481 2587 3.474806 GGCGACAAGACGATGGTG 58.525 61.111 0.00 0.00 35.09 4.17
2488 2594 2.741211 GGTTCCCGGCGACAAGAC 60.741 66.667 9.30 0.00 0.00 3.01
2489 2595 4.367023 CGGTTCCCGGCGACAAGA 62.367 66.667 9.30 0.00 44.15 3.02
2501 2607 1.157585 GAGTGGGAAGCTTTCGGTTC 58.842 55.000 0.00 0.00 44.73 3.62
2502 2608 0.250770 GGAGTGGGAAGCTTTCGGTT 60.251 55.000 0.00 0.00 0.00 4.44
2503 2609 1.375326 GGAGTGGGAAGCTTTCGGT 59.625 57.895 0.00 0.00 0.00 4.69
2504 2610 1.377333 GGGAGTGGGAAGCTTTCGG 60.377 63.158 0.00 0.00 0.00 4.30
2505 2611 0.955919 GTGGGAGTGGGAAGCTTTCG 60.956 60.000 0.00 0.00 0.00 3.46
2506 2612 0.402121 AGTGGGAGTGGGAAGCTTTC 59.598 55.000 0.00 0.00 0.00 2.62
2507 2613 0.402121 GAGTGGGAGTGGGAAGCTTT 59.598 55.000 0.00 0.00 0.00 3.51
2508 2614 1.492993 GGAGTGGGAGTGGGAAGCTT 61.493 60.000 0.00 0.00 0.00 3.74
2509 2615 1.920835 GGAGTGGGAGTGGGAAGCT 60.921 63.158 0.00 0.00 0.00 3.74
2510 2616 2.671682 GGAGTGGGAGTGGGAAGC 59.328 66.667 0.00 0.00 0.00 3.86
2511 2617 2.301738 GGGGAGTGGGAGTGGGAAG 61.302 68.421 0.00 0.00 0.00 3.46
2512 2618 2.204090 GGGGAGTGGGAGTGGGAA 60.204 66.667 0.00 0.00 0.00 3.97
2513 2619 4.348495 GGGGGAGTGGGAGTGGGA 62.348 72.222 0.00 0.00 0.00 4.37
2515 2621 4.715130 TCGGGGGAGTGGGAGTGG 62.715 72.222 0.00 0.00 0.00 4.00
2516 2622 3.391382 GTCGGGGGAGTGGGAGTG 61.391 72.222 0.00 0.00 0.00 3.51
2517 2623 3.923645 TGTCGGGGGAGTGGGAGT 61.924 66.667 0.00 0.00 0.00 3.85
2518 2624 3.391382 GTGTCGGGGGAGTGGGAG 61.391 72.222 0.00 0.00 0.00 4.30
2519 2625 3.777818 TTGTGTCGGGGGAGTGGGA 62.778 63.158 0.00 0.00 0.00 4.37
2520 2626 3.246112 TTGTGTCGGGGGAGTGGG 61.246 66.667 0.00 0.00 0.00 4.61
2521 2627 2.032071 GTTGTGTCGGGGGAGTGG 59.968 66.667 0.00 0.00 0.00 4.00
2522 2628 2.032071 GGTTGTGTCGGGGGAGTG 59.968 66.667 0.00 0.00 0.00 3.51
2523 2629 3.622826 CGGTTGTGTCGGGGGAGT 61.623 66.667 0.00 0.00 0.00 3.85
2533 2639 3.855209 CTTTGCGGTCGCGGTTGTG 62.855 63.158 6.13 0.00 45.51 3.33
2534 2640 3.645975 CTTTGCGGTCGCGGTTGT 61.646 61.111 6.13 0.00 45.51 3.32
2560 2666 3.638592 AAGGATTTGGTCGGGGCCG 62.639 63.158 0.00 0.00 41.35 6.13
2561 2667 1.753078 GAAGGATTTGGTCGGGGCC 60.753 63.158 0.00 0.00 0.00 5.80
2562 2668 2.112815 CGAAGGATTTGGTCGGGGC 61.113 63.158 0.00 0.00 0.00 5.80
2563 2669 0.743345 GACGAAGGATTTGGTCGGGG 60.743 60.000 0.00 0.00 39.07 5.73
2564 2670 0.743345 GGACGAAGGATTTGGTCGGG 60.743 60.000 0.00 0.00 41.38 5.14
2565 2671 0.249398 AGGACGAAGGATTTGGTCGG 59.751 55.000 0.00 0.00 41.38 4.79
2566 2672 1.067142 TCAGGACGAAGGATTTGGTCG 60.067 52.381 0.00 0.00 41.38 4.79
2567 2673 2.289444 TGTCAGGACGAAGGATTTGGTC 60.289 50.000 0.00 0.00 40.20 4.02
2568 2674 1.697432 TGTCAGGACGAAGGATTTGGT 59.303 47.619 0.00 0.00 32.29 3.67
2569 2675 2.076863 GTGTCAGGACGAAGGATTTGG 58.923 52.381 0.00 0.00 32.29 3.28
2570 2676 2.076863 GGTGTCAGGACGAAGGATTTG 58.923 52.381 0.00 0.00 34.94 2.32
2571 2677 1.337823 CGGTGTCAGGACGAAGGATTT 60.338 52.381 0.00 0.00 0.00 2.17
2572 2678 0.246635 CGGTGTCAGGACGAAGGATT 59.753 55.000 0.00 0.00 0.00 3.01
2573 2679 1.605058 CCGGTGTCAGGACGAAGGAT 61.605 60.000 0.00 0.00 0.00 3.24
2574 2680 2.273179 CCGGTGTCAGGACGAAGGA 61.273 63.158 0.00 0.00 0.00 3.36
2575 2681 2.261671 CCGGTGTCAGGACGAAGG 59.738 66.667 0.00 0.00 0.00 3.46
2576 2682 2.432628 GCCGGTGTCAGGACGAAG 60.433 66.667 1.90 0.00 0.00 3.79
2577 2683 3.228017 TGCCGGTGTCAGGACGAA 61.228 61.111 1.90 0.00 0.00 3.85
2578 2684 3.986006 GTGCCGGTGTCAGGACGA 61.986 66.667 1.90 0.00 0.00 4.20
2579 2685 4.293648 TGTGCCGGTGTCAGGACG 62.294 66.667 1.90 0.00 0.00 4.79
2580 2686 2.665185 GTGTGCCGGTGTCAGGAC 60.665 66.667 1.90 0.00 0.00 3.85
2581 2687 2.842462 AGTGTGCCGGTGTCAGGA 60.842 61.111 1.90 0.00 0.00 3.86
2582 2688 2.357517 GAGTGTGCCGGTGTCAGG 60.358 66.667 1.90 0.00 0.00 3.86
2583 2689 2.734723 CGAGTGTGCCGGTGTCAG 60.735 66.667 1.90 0.00 0.00 3.51
2584 2690 3.493830 GACGAGTGTGCCGGTGTCA 62.494 63.158 1.90 0.00 0.00 3.58
2585 2691 2.733593 GACGAGTGTGCCGGTGTC 60.734 66.667 1.90 0.00 0.00 3.67
2586 2692 4.640855 CGACGAGTGTGCCGGTGT 62.641 66.667 1.90 0.00 0.00 4.16
2624 2730 1.451028 CCTTGGACCAGCTAGCTGC 60.451 63.158 34.82 23.32 42.35 5.25
2625 2731 1.222936 CCCTTGGACCAGCTAGCTG 59.777 63.158 33.58 33.58 43.26 4.24
2626 2732 2.674220 GCCCTTGGACCAGCTAGCT 61.674 63.158 12.68 12.68 0.00 3.32
2627 2733 2.124529 GCCCTTGGACCAGCTAGC 60.125 66.667 6.62 6.62 0.00 3.42
2628 2734 2.187946 CGCCCTTGGACCAGCTAG 59.812 66.667 0.00 0.00 0.00 3.42
2629 2735 3.399181 CCGCCCTTGGACCAGCTA 61.399 66.667 0.00 0.00 0.00 3.32
2645 2751 3.179939 GACGAAAGGAGTCGCGCC 61.180 66.667 0.00 0.00 45.00 6.53
2660 2766 4.736896 ACGAAGAAGCCGGCCGAC 62.737 66.667 30.73 17.62 0.00 4.79
2661 2767 4.430765 GACGAAGAAGCCGGCCGA 62.431 66.667 30.73 0.00 0.00 5.54
2663 2769 4.430765 TCGACGAAGAAGCCGGCC 62.431 66.667 26.15 9.10 0.00 6.13
2664 2770 3.179939 GTCGACGAAGAAGCCGGC 61.180 66.667 21.89 21.89 0.00 6.13
2665 2771 2.874780 CGTCGACGAAGAAGCCGG 60.875 66.667 33.35 0.00 43.02 6.13
2666 2772 3.533691 GCGTCGACGAAGAAGCCG 61.534 66.667 39.74 12.10 43.02 5.52
2668 2774 3.179939 GGGCGTCGACGAAGAAGC 61.180 66.667 39.74 21.05 43.24 3.86
2669 2775 2.874780 CGGGCGTCGACGAAGAAG 60.875 66.667 39.74 20.89 43.02 2.85
2673 2779 4.946266 TTTGCGGGCGTCGACGAA 62.946 61.111 39.74 22.24 43.02 3.85
2676 2782 4.072088 CAGTTTGCGGGCGTCGAC 62.072 66.667 5.18 5.18 42.43 4.20
2677 2783 4.595538 ACAGTTTGCGGGCGTCGA 62.596 61.111 0.00 0.00 42.43 4.20
2678 2784 3.573489 GAACAGTTTGCGGGCGTCG 62.573 63.158 0.00 0.00 42.76 5.12
2679 2785 2.251371 GAACAGTTTGCGGGCGTC 59.749 61.111 0.00 0.00 0.00 5.19
2680 2786 3.645975 CGAACAGTTTGCGGGCGT 61.646 61.111 0.00 0.00 0.00 5.68
2681 2787 3.342627 TCGAACAGTTTGCGGGCG 61.343 61.111 0.00 0.00 0.00 6.13
2682 2788 2.251371 GTCGAACAGTTTGCGGGC 59.749 61.111 0.00 0.00 0.00 6.13
2683 2789 1.569493 CTGTCGAACAGTTTGCGGG 59.431 57.895 6.79 0.00 41.19 6.13
2692 2798 1.021202 CCTTGGCAAACTGTCGAACA 58.979 50.000 0.00 0.00 0.00 3.18
2693 2799 1.021968 ACCTTGGCAAACTGTCGAAC 58.978 50.000 0.00 0.00 0.00 3.95
2694 2800 2.215196 GTACCTTGGCAAACTGTCGAA 58.785 47.619 0.00 0.00 0.00 3.71
2695 2801 1.139256 TGTACCTTGGCAAACTGTCGA 59.861 47.619 0.00 0.00 0.00 4.20
2696 2802 1.588674 TGTACCTTGGCAAACTGTCG 58.411 50.000 0.00 0.00 0.00 4.35
2697 2803 4.584327 ATTTGTACCTTGGCAAACTGTC 57.416 40.909 0.00 0.00 37.41 3.51
2698 2804 4.442753 CCAATTTGTACCTTGGCAAACTGT 60.443 41.667 0.00 1.67 37.41 3.55
2699 2805 4.057432 CCAATTTGTACCTTGGCAAACTG 58.943 43.478 0.00 0.00 37.41 3.16
2700 2806 3.964031 TCCAATTTGTACCTTGGCAAACT 59.036 39.130 0.00 0.00 41.41 2.66
2701 2807 4.055360 GTCCAATTTGTACCTTGGCAAAC 58.945 43.478 0.00 0.00 41.41 2.93
2702 2808 3.964031 AGTCCAATTTGTACCTTGGCAAA 59.036 39.130 0.00 0.00 41.41 3.68
2703 2809 3.571590 AGTCCAATTTGTACCTTGGCAA 58.428 40.909 11.99 0.00 41.41 4.52
2704 2810 3.153919 GAGTCCAATTTGTACCTTGGCA 58.846 45.455 11.99 0.00 41.41 4.92
2705 2811 2.492088 GGAGTCCAATTTGTACCTTGGC 59.508 50.000 3.60 8.61 41.41 4.52
2706 2812 2.747446 CGGAGTCCAATTTGTACCTTGG 59.253 50.000 10.49 11.01 42.72 3.61
2707 2813 2.161609 GCGGAGTCCAATTTGTACCTTG 59.838 50.000 10.49 0.00 0.00 3.61
2708 2814 2.433436 GCGGAGTCCAATTTGTACCTT 58.567 47.619 10.49 0.00 0.00 3.50
2709 2815 1.339727 GGCGGAGTCCAATTTGTACCT 60.340 52.381 10.49 0.00 0.00 3.08
2710 2816 1.092348 GGCGGAGTCCAATTTGTACC 58.908 55.000 10.49 0.00 0.00 3.34
2711 2817 0.725117 CGGCGGAGTCCAATTTGTAC 59.275 55.000 10.49 0.00 0.00 2.90
2712 2818 0.609151 TCGGCGGAGTCCAATTTGTA 59.391 50.000 10.49 0.00 0.00 2.41
2713 2819 0.953960 GTCGGCGGAGTCCAATTTGT 60.954 55.000 10.49 0.00 0.00 2.83
2714 2820 1.794222 GTCGGCGGAGTCCAATTTG 59.206 57.895 10.49 0.00 0.00 2.32
2715 2821 1.740296 CGTCGGCGGAGTCCAATTT 60.740 57.895 10.49 0.00 0.00 1.82
2716 2822 2.125673 CGTCGGCGGAGTCCAATT 60.126 61.111 10.49 0.00 0.00 2.32
2717 2823 3.064987 CTCGTCGGCGGAGTCCAAT 62.065 63.158 10.62 0.00 38.89 3.16
2718 2824 3.744719 CTCGTCGGCGGAGTCCAA 61.745 66.667 10.62 0.00 38.89 3.53
2720 2826 3.680338 GAACTCGTCGGCGGAGTCC 62.680 68.421 17.09 0.00 38.89 3.85
2721 2827 2.197643 AAGAACTCGTCGGCGGAGTC 62.198 60.000 17.09 4.15 38.89 3.36
2722 2828 2.266627 AAGAACTCGTCGGCGGAGT 61.267 57.895 10.62 12.16 38.89 3.85
2723 2829 2.567049 AAGAACTCGTCGGCGGAG 59.433 61.111 10.62 9.49 38.89 4.63


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.