Multiple sequence alignment - TraesCS5B01G425700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G425700 chr5B 100.000 2391 0 0 772 3162 601401740 601399350 0.000000e+00 4416.0
1 TraesCS5B01G425700 chr5B 100.000 473 0 0 1 473 601402511 601402039 0.000000e+00 874.0
2 TraesCS5B01G425700 chr5B 100.000 67 0 0 3474 3540 601399038 601398972 1.330000e-24 124.0
3 TraesCS5B01G425700 chr5B 97.619 42 1 0 2928 2969 336095439 336095398 4.900000e-09 73.1
4 TraesCS5B01G425700 chr5D 90.274 1203 76 17 1685 2881 488395001 488393834 0.000000e+00 1535.0
5 TraesCS5B01G425700 chr5D 88.657 335 18 18 89 413 488396894 488396570 1.190000e-104 390.0
6 TraesCS5B01G425700 chr5D 80.563 355 37 13 850 1196 488396441 488396111 9.820000e-61 244.0
7 TraesCS5B01G425700 chr5D 94.030 134 4 2 2970 3099 488393834 488393701 2.160000e-47 200.0
8 TraesCS5B01G425700 chr5D 96.154 52 2 0 3488 3539 266749821 266749770 6.300000e-13 86.1
9 TraesCS5B01G425700 chr5A 87.538 329 26 8 8 322 609247688 609247361 2.010000e-97 366.0
10 TraesCS5B01G425700 chr5A 94.382 89 3 1 1 87 609247782 609247694 6.160000e-28 135.0
11 TraesCS5B01G425700 chr5A 88.406 69 3 3 2883 2946 307714619 307714551 1.050000e-10 78.7
12 TraesCS5B01G425700 chr5A 97.778 45 0 1 2926 2969 136984956 136985000 3.790000e-10 76.8
13 TraesCS5B01G425700 chr5A 93.617 47 3 0 1924 1970 609245883 609245837 1.760000e-08 71.3
14 TraesCS5B01G425700 chr6B 87.778 90 7 4 2883 2969 702430235 702430147 6.250000e-18 102.0
15 TraesCS5B01G425700 chr6B 97.500 40 1 0 2883 2922 21849761 21849722 6.340000e-08 69.4
16 TraesCS5B01G425700 chr7D 100.000 49 0 0 3488 3536 42634950 42634998 1.350000e-14 91.6
17 TraesCS5B01G425700 chr7D 96.154 52 2 0 3488 3539 474349138 474349087 6.300000e-13 86.1
18 TraesCS5B01G425700 chr7D 97.826 46 1 0 2877 2922 89092050 89092005 2.930000e-11 80.5
19 TraesCS5B01G425700 chr7D 93.878 49 3 0 2877 2925 451894330 451894282 1.360000e-09 75.0
20 TraesCS5B01G425700 chr7D 97.619 42 1 0 2928 2969 516027195 516027154 4.900000e-09 73.1
21 TraesCS5B01G425700 chr2D 100.000 49 0 0 3488 3536 262614631 262614679 1.350000e-14 91.6
22 TraesCS5B01G425700 chr2D 100.000 47 0 0 3488 3534 270849531 270849485 1.750000e-13 87.9
23 TraesCS5B01G425700 chr2D 89.796 49 5 0 84 132 470041382 470041430 2.950000e-06 63.9
24 TraesCS5B01G425700 chr2A 98.077 52 1 0 3488 3539 425815744 425815693 1.350000e-14 91.6
25 TraesCS5B01G425700 chr2A 97.917 48 0 1 2883 2930 346210349 346210395 8.140000e-12 82.4
26 TraesCS5B01G425700 chr6A 96.296 54 1 1 3488 3540 55552628 55552575 1.750000e-13 87.9
27 TraesCS5B01G425700 chr3A 96.154 52 2 0 3488 3539 430795477 430795426 6.300000e-13 86.1
28 TraesCS5B01G425700 chr6D 91.803 61 3 1 2872 2930 17055129 17055069 2.260000e-12 84.2
29 TraesCS5B01G425700 chr1D 97.917 48 0 1 2883 2930 20995889 20995935 8.140000e-12 82.4
30 TraesCS5B01G425700 chr1D 89.062 64 4 2 2883 2946 437416193 437416133 3.790000e-10 76.8
31 TraesCS5B01G425700 chr1A 94.444 54 1 1 3482 3533 532477037 532476984 8.140000e-12 82.4
32 TraesCS5B01G425700 chr4A 96.000 50 0 1 2883 2930 734092934 734092885 2.930000e-11 80.5
33 TraesCS5B01G425700 chr3B 96.000 50 0 1 2883 2930 200367786 200367737 2.930000e-11 80.5
34 TraesCS5B01G425700 chr3B 93.617 47 3 0 84 130 328895598 328895552 1.760000e-08 71.3
35 TraesCS5B01G425700 chr7B 97.778 45 0 1 2926 2969 433515317 433515361 3.790000e-10 76.8
36 TraesCS5B01G425700 chr2B 97.778 45 0 1 2926 2969 494119611 494119655 3.790000e-10 76.8
37 TraesCS5B01G425700 chr1B 97.674 43 1 0 2928 2970 22802444 22802486 1.360000e-09 75.0
38 TraesCS5B01G425700 chr4D 97.619 42 1 0 2928 2969 27156490 27156531 4.900000e-09 73.1
39 TraesCS5B01G425700 chr3D 97.619 42 1 0 2928 2969 546294358 546294399 4.900000e-09 73.1
40 TraesCS5B01G425700 chr3D 93.750 48 1 2 2883 2929 138091108 138091062 1.760000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G425700 chr5B 601398972 601402511 3539 True 1804.666667 4416 100.000 1 3540 3 chr5B.!!$R2 3539
1 TraesCS5B01G425700 chr5D 488393701 488396894 3193 True 592.250000 1535 88.381 89 3099 4 chr5D.!!$R2 3010

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
411 422 0.034670 AAGCCTCAGCCATGGAAGAC 60.035 55.0 18.4 1.39 41.25 3.01 F
949 961 0.042581 AAACCCACCCATCCCCAATC 59.957 55.0 0.0 0.00 0.00 2.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1281 1712 0.033208 CCATGTACCAAGGCACCCAT 60.033 55.0 0.00 0.0 0.00 4.00 R
2931 3641 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.0 24.35 0.0 34.61 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 9.859427 TCTTATGAATAGTCAAAGCCAATTTTG 57.141 29.630 0.00 0.00 37.30 2.44
30 31 9.859427 CTTATGAATAGTCAAAGCCAATTTTGA 57.141 29.630 0.00 0.00 42.93 2.69
33 34 8.954950 TGAATAGTCAAAGCCAATTTTGAAAA 57.045 26.923 3.05 0.00 45.62 2.29
34 35 9.388506 TGAATAGTCAAAGCCAATTTTGAAAAA 57.611 25.926 0.00 0.00 45.62 1.94
35 36 9.650371 GAATAGTCAAAGCCAATTTTGAAAAAC 57.350 29.630 0.00 0.00 45.62 2.43
36 37 8.729805 ATAGTCAAAGCCAATTTTGAAAAACA 57.270 26.923 0.00 0.00 45.62 2.83
37 38 6.841119 AGTCAAAGCCAATTTTGAAAAACAC 58.159 32.000 0.00 0.00 45.62 3.32
38 39 6.429385 AGTCAAAGCCAATTTTGAAAAACACA 59.571 30.769 0.00 0.00 45.62 3.72
39 40 7.121020 AGTCAAAGCCAATTTTGAAAAACACAT 59.879 29.630 0.00 0.00 45.62 3.21
40 41 7.754475 GTCAAAGCCAATTTTGAAAAACACATT 59.246 29.630 0.00 0.00 45.62 2.71
41 42 8.950210 TCAAAGCCAATTTTGAAAAACACATTA 58.050 25.926 0.00 0.00 42.39 1.90
42 43 9.224058 CAAAGCCAATTTTGAAAAACACATTAG 57.776 29.630 0.00 0.00 39.79 1.73
43 44 7.495135 AGCCAATTTTGAAAAACACATTAGG 57.505 32.000 0.00 0.00 0.00 2.69
44 45 6.017192 AGCCAATTTTGAAAAACACATTAGGC 60.017 34.615 0.00 0.00 32.90 3.93
45 46 6.667370 CCAATTTTGAAAAACACATTAGGCC 58.333 36.000 0.00 0.00 0.00 5.19
46 47 6.293900 CCAATTTTGAAAAACACATTAGGCCC 60.294 38.462 0.00 0.00 0.00 5.80
47 48 4.344359 TTTGAAAAACACATTAGGCCCC 57.656 40.909 0.00 0.00 0.00 5.80
48 49 2.964209 TGAAAAACACATTAGGCCCCA 58.036 42.857 0.00 0.00 0.00 4.96
49 50 3.515562 TGAAAAACACATTAGGCCCCAT 58.484 40.909 0.00 0.00 0.00 4.00
50 51 4.678256 TGAAAAACACATTAGGCCCCATA 58.322 39.130 0.00 0.00 0.00 2.74
51 52 5.276440 TGAAAAACACATTAGGCCCCATAT 58.724 37.500 0.00 0.00 0.00 1.78
52 53 6.436027 TGAAAAACACATTAGGCCCCATATA 58.564 36.000 0.00 0.00 0.00 0.86
53 54 7.072562 TGAAAAACACATTAGGCCCCATATAT 58.927 34.615 0.00 0.00 0.00 0.86
54 55 8.228206 TGAAAAACACATTAGGCCCCATATATA 58.772 33.333 0.00 0.00 0.00 0.86
55 56 9.255029 GAAAAACACATTAGGCCCCATATATAT 57.745 33.333 0.00 0.00 0.00 0.86
57 58 9.920946 AAAACACATTAGGCCCCATATATATAG 57.079 33.333 0.00 0.00 0.00 1.31
58 59 8.869986 AACACATTAGGCCCCATATATATAGA 57.130 34.615 0.00 0.00 0.00 1.98
59 60 9.465704 AACACATTAGGCCCCATATATATAGAT 57.534 33.333 0.00 0.00 0.00 1.98
60 61 8.884323 ACACATTAGGCCCCATATATATAGATG 58.116 37.037 9.92 9.92 0.00 2.90
61 62 8.324306 CACATTAGGCCCCATATATATAGATGG 58.676 40.741 23.99 23.99 43.06 3.51
62 63 8.248771 ACATTAGGCCCCATATATATAGATGGA 58.751 37.037 29.92 14.46 45.55 3.41
63 64 8.766476 CATTAGGCCCCATATATATAGATGGAG 58.234 40.741 29.92 21.57 45.55 3.86
64 65 5.669857 AGGCCCCATATATATAGATGGAGG 58.330 45.833 29.92 27.17 45.55 4.30
65 66 4.785376 GGCCCCATATATATAGATGGAGGG 59.215 50.000 29.92 24.39 45.55 4.30
66 67 5.462667 GGCCCCATATATATAGATGGAGGGA 60.463 48.000 29.92 0.00 45.55 4.20
67 68 5.723887 GCCCCATATATATAGATGGAGGGAG 59.276 48.000 29.92 16.55 45.55 4.30
68 69 6.700692 GCCCCATATATATAGATGGAGGGAGT 60.701 46.154 29.92 0.00 45.55 3.85
69 70 7.479297 GCCCCATATATATAGATGGAGGGAGTA 60.479 44.444 29.92 0.00 45.55 2.59
70 71 8.637371 CCCCATATATATAGATGGAGGGAGTAT 58.363 40.741 29.92 0.00 45.55 2.12
79 80 6.423358 AGATGGAGGGAGTATATACATCCA 57.577 41.667 21.46 21.46 39.52 3.41
80 81 7.002836 AGATGGAGGGAGTATATACATCCAT 57.997 40.000 25.96 25.96 46.13 3.41
81 82 8.131052 AGATGGAGGGAGTATATACATCCATA 57.869 38.462 25.84 12.48 44.11 2.74
82 83 8.751144 AGATGGAGGGAGTATATACATCCATAT 58.249 37.037 25.84 22.89 44.11 1.78
83 84 8.733092 ATGGAGGGAGTATATACATCCATATG 57.267 38.462 25.21 0.00 42.70 1.78
142 143 6.750501 TGTACTTATGAACAGTCAATACGCTC 59.249 38.462 0.00 0.00 37.30 5.03
154 155 3.861113 TCAATACGCTCGATTAACGCTTT 59.139 39.130 0.00 0.00 42.26 3.51
257 258 3.742983 GAGGATTCGACAGTGACCC 57.257 57.895 0.00 0.00 0.00 4.46
258 259 0.175989 GAGGATTCGACAGTGACCCC 59.824 60.000 0.00 0.00 0.00 4.95
260 261 1.810030 GATTCGACAGTGACCCCGC 60.810 63.158 0.00 0.00 0.00 6.13
261 262 2.501223 GATTCGACAGTGACCCCGCA 62.501 60.000 0.00 0.00 0.00 5.69
263 264 2.779951 TTCGACAGTGACCCCGCATG 62.780 60.000 0.00 0.00 0.00 4.06
264 265 2.436646 GACAGTGACCCCGCATGG 60.437 66.667 0.00 0.00 0.00 3.66
267 268 4.033776 AGTGACCCCGCATGGTGG 62.034 66.667 0.00 0.00 39.24 4.61
277 284 3.138798 CATGGTGGCAGCCAGAGC 61.139 66.667 16.83 3.81 42.47 4.09
296 303 2.524394 AGGCCACTCGGTCACACT 60.524 61.111 5.01 0.00 40.51 3.55
337 344 1.447945 GGTCCTTTTCAGCTCAGCTC 58.552 55.000 0.00 0.00 36.40 4.09
338 345 1.271054 GGTCCTTTTCAGCTCAGCTCA 60.271 52.381 0.00 0.00 36.40 4.26
339 346 2.075338 GTCCTTTTCAGCTCAGCTCAG 58.925 52.381 0.00 0.00 36.40 3.35
340 347 0.803740 CCTTTTCAGCTCAGCTCAGC 59.196 55.000 0.00 0.00 36.40 4.26
363 370 2.490115 CAGCTCGTCCTCTCTTTACTGT 59.510 50.000 0.00 0.00 0.00 3.55
383 394 4.746466 TGTTTCTTCTCTTCCTCCTCTCT 58.254 43.478 0.00 0.00 0.00 3.10
407 418 1.964608 CTCGAAGCCTCAGCCATGGA 61.965 60.000 18.40 0.00 41.25 3.41
410 421 0.254178 GAAGCCTCAGCCATGGAAGA 59.746 55.000 18.40 11.24 41.25 2.87
411 422 0.034670 AAGCCTCAGCCATGGAAGAC 60.035 55.000 18.40 1.39 41.25 3.01
412 423 1.203441 AGCCTCAGCCATGGAAGACA 61.203 55.000 18.40 0.00 41.25 3.41
413 424 0.747283 GCCTCAGCCATGGAAGACAG 60.747 60.000 18.40 5.46 0.00 3.51
414 425 0.747283 CCTCAGCCATGGAAGACAGC 60.747 60.000 18.40 0.00 0.00 4.40
415 426 0.252479 CTCAGCCATGGAAGACAGCT 59.748 55.000 18.40 0.00 31.40 4.24
416 427 0.694771 TCAGCCATGGAAGACAGCTT 59.305 50.000 18.40 0.00 36.96 3.74
425 436 3.261250 AAGACAGCTTCAGCCATGG 57.739 52.632 7.63 7.63 43.38 3.66
426 437 0.694771 AAGACAGCTTCAGCCATGGA 59.305 50.000 18.40 0.00 43.38 3.41
427 438 0.252479 AGACAGCTTCAGCCATGGAG 59.748 55.000 18.40 7.16 43.38 3.86
433 444 2.353357 CTTCAGCCATGGAGCCATAA 57.647 50.000 18.40 0.00 34.91 1.90
434 445 1.952296 CTTCAGCCATGGAGCCATAAC 59.048 52.381 18.40 0.00 34.91 1.89
435 446 1.216064 TCAGCCATGGAGCCATAACT 58.784 50.000 18.40 0.00 34.91 2.24
447 458 1.272147 GCCATAACTCCATCCATCCCC 60.272 57.143 0.00 0.00 0.00 4.81
456 468 1.063417 CCATCCATCCCCAAGAGCTTT 60.063 52.381 0.00 0.00 0.00 3.51
789 801 4.508128 GCCCAAGATCCGCGTCGA 62.508 66.667 4.92 0.00 0.00 4.20
790 802 2.183300 CCCAAGATCCGCGTCGAA 59.817 61.111 4.92 0.00 0.00 3.71
791 803 1.447140 CCCAAGATCCGCGTCGAAA 60.447 57.895 4.92 0.00 0.00 3.46
792 804 1.693083 CCCAAGATCCGCGTCGAAAC 61.693 60.000 4.92 0.00 0.00 2.78
807 819 0.539986 GAAACGAGCCATGGGAGGTA 59.460 55.000 15.13 0.00 0.00 3.08
808 820 0.541863 AAACGAGCCATGGGAGGTAG 59.458 55.000 15.13 0.00 0.00 3.18
809 821 0.617820 AACGAGCCATGGGAGGTAGT 60.618 55.000 15.13 0.00 0.00 2.73
811 823 1.133136 ACGAGCCATGGGAGGTAGTAT 60.133 52.381 15.13 0.00 0.00 2.12
812 824 1.273606 CGAGCCATGGGAGGTAGTATG 59.726 57.143 15.13 0.00 0.00 2.39
814 826 1.059913 GCCATGGGAGGTAGTATGCT 58.940 55.000 15.13 0.00 0.00 3.79
816 828 1.349026 CCATGGGAGGTAGTATGCTGG 59.651 57.143 2.85 0.00 0.00 4.85
817 829 2.329267 CATGGGAGGTAGTATGCTGGA 58.671 52.381 0.00 0.00 0.00 3.86
819 831 1.291033 TGGGAGGTAGTATGCTGGACT 59.709 52.381 0.00 0.00 0.00 3.85
820 832 1.964933 GGGAGGTAGTATGCTGGACTC 59.035 57.143 0.00 0.00 0.00 3.36
822 834 1.609555 GAGGTAGTATGCTGGACTCCG 59.390 57.143 0.00 0.00 0.00 4.63
823 835 1.063867 AGGTAGTATGCTGGACTCCGT 60.064 52.381 0.00 0.00 0.00 4.69
824 836 1.755380 GGTAGTATGCTGGACTCCGTT 59.245 52.381 0.00 0.00 0.00 4.44
826 838 1.267121 AGTATGCTGGACTCCGTTGT 58.733 50.000 0.00 0.00 0.00 3.32
827 839 1.623811 AGTATGCTGGACTCCGTTGTT 59.376 47.619 0.00 0.00 0.00 2.83
829 841 0.108585 ATGCTGGACTCCGTTGTTGT 59.891 50.000 0.00 0.00 0.00 3.32
830 842 0.753867 TGCTGGACTCCGTTGTTGTA 59.246 50.000 0.00 0.00 0.00 2.41
831 843 1.139256 TGCTGGACTCCGTTGTTGTAA 59.861 47.619 0.00 0.00 0.00 2.41
832 844 1.798813 GCTGGACTCCGTTGTTGTAAG 59.201 52.381 0.00 0.00 0.00 2.34
833 845 2.547218 GCTGGACTCCGTTGTTGTAAGA 60.547 50.000 0.00 0.00 0.00 2.10
834 846 3.318017 CTGGACTCCGTTGTTGTAAGAG 58.682 50.000 0.00 0.00 0.00 2.85
835 847 2.036733 TGGACTCCGTTGTTGTAAGAGG 59.963 50.000 0.00 0.00 0.00 3.69
836 848 2.036862 GGACTCCGTTGTTGTAAGAGGT 59.963 50.000 0.00 0.00 0.00 3.85
837 849 3.315418 GACTCCGTTGTTGTAAGAGGTC 58.685 50.000 0.00 0.00 0.00 3.85
838 850 2.288030 ACTCCGTTGTTGTAAGAGGTCG 60.288 50.000 0.00 0.00 0.00 4.79
839 851 1.682854 TCCGTTGTTGTAAGAGGTCGT 59.317 47.619 0.00 0.00 0.00 4.34
840 852 2.101249 TCCGTTGTTGTAAGAGGTCGTT 59.899 45.455 0.00 0.00 0.00 3.85
841 853 2.220133 CCGTTGTTGTAAGAGGTCGTTG 59.780 50.000 0.00 0.00 0.00 4.10
842 854 2.861935 CGTTGTTGTAAGAGGTCGTTGT 59.138 45.455 0.00 0.00 0.00 3.32
843 855 3.302221 CGTTGTTGTAAGAGGTCGTTGTG 60.302 47.826 0.00 0.00 0.00 3.33
844 856 3.530265 TGTTGTAAGAGGTCGTTGTGT 57.470 42.857 0.00 0.00 0.00 3.72
845 857 3.864243 TGTTGTAAGAGGTCGTTGTGTT 58.136 40.909 0.00 0.00 0.00 3.32
846 858 3.866910 TGTTGTAAGAGGTCGTTGTGTTC 59.133 43.478 0.00 0.00 0.00 3.18
847 859 4.117685 GTTGTAAGAGGTCGTTGTGTTCT 58.882 43.478 0.00 0.00 0.00 3.01
848 860 4.395959 TGTAAGAGGTCGTTGTGTTCTT 57.604 40.909 0.00 0.00 33.15 2.52
849 861 4.365723 TGTAAGAGGTCGTTGTGTTCTTC 58.634 43.478 0.00 0.00 31.19 2.87
850 862 3.536956 AAGAGGTCGTTGTGTTCTTCA 57.463 42.857 0.00 0.00 0.00 3.02
851 863 3.099267 AGAGGTCGTTGTGTTCTTCAG 57.901 47.619 0.00 0.00 0.00 3.02
852 864 1.527311 GAGGTCGTTGTGTTCTTCAGC 59.473 52.381 0.00 0.00 0.00 4.26
853 865 1.139058 AGGTCGTTGTGTTCTTCAGCT 59.861 47.619 0.00 0.00 0.00 4.24
868 880 4.899239 GCTCACGGATGGGAGGCG 62.899 72.222 0.00 0.00 0.00 5.52
909 921 4.740822 AGGGGCACATTGGGCGTC 62.741 66.667 4.52 0.00 0.00 5.19
914 926 3.027170 GCACATTGGGCGTCTGACG 62.027 63.158 24.78 24.78 45.88 4.35
924 936 2.603776 GTCTGACGGGTGGGTCCT 60.604 66.667 0.00 0.00 36.07 3.85
937 949 3.774616 GGTCCTCGGATAAACCCAC 57.225 57.895 0.00 0.00 34.64 4.61
940 952 0.252789 TCCTCGGATAAACCCACCCA 60.253 55.000 0.00 0.00 34.64 4.51
947 959 1.289530 GATAAACCCACCCATCCCCAA 59.710 52.381 0.00 0.00 0.00 4.12
948 960 1.398799 TAAACCCACCCATCCCCAAT 58.601 50.000 0.00 0.00 0.00 3.16
949 961 0.042581 AAACCCACCCATCCCCAATC 59.957 55.000 0.00 0.00 0.00 2.67
952 964 2.014550 CCACCCATCCCCAATCCCT 61.015 63.158 0.00 0.00 0.00 4.20
953 965 1.538666 CACCCATCCCCAATCCCTC 59.461 63.158 0.00 0.00 0.00 4.30
955 967 0.554865 ACCCATCCCCAATCCCTCAA 60.555 55.000 0.00 0.00 0.00 3.02
957 969 1.221265 CCCATCCCCAATCCCTCAATT 59.779 52.381 0.00 0.00 0.00 2.32
961 973 0.105504 CCCCAATCCCTCAATTCCCC 60.106 60.000 0.00 0.00 0.00 4.81
962 974 0.936691 CCCAATCCCTCAATTCCCCT 59.063 55.000 0.00 0.00 0.00 4.79
1221 1652 4.811364 GCCCCTGAGCCAAGCCTC 62.811 72.222 0.00 0.00 0.00 4.70
1222 1653 4.120755 CCCCTGAGCCAAGCCTCC 62.121 72.222 0.00 0.00 0.00 4.30
1223 1654 3.013932 CCCTGAGCCAAGCCTCCT 61.014 66.667 0.00 0.00 0.00 3.69
1224 1655 2.588989 CCTGAGCCAAGCCTCCTC 59.411 66.667 0.00 0.00 0.00 3.71
1225 1656 2.588989 CTGAGCCAAGCCTCCTCC 59.411 66.667 0.00 0.00 0.00 4.30
1305 1736 2.278738 CCTTGGTACATGGCCCCC 59.721 66.667 0.00 0.00 46.55 5.40
1331 1762 2.203209 GGACATGACCCATCCGCC 60.203 66.667 0.00 0.00 0.00 6.13
1333 1764 3.774599 GACATGACCCATCCGCCCC 62.775 68.421 0.00 0.00 0.00 5.80
1334 1765 4.935495 CATGACCCATCCGCCCCG 62.935 72.222 0.00 0.00 0.00 5.73
1431 1874 4.814041 GGCCTCCTCCTGCCCTCT 62.814 72.222 0.00 0.00 41.97 3.69
1455 1898 3.983420 CCCCCTGAGCCCTGCAAA 61.983 66.667 0.00 0.00 0.00 3.68
1456 1899 2.361771 CCCCTGAGCCCTGCAAAT 59.638 61.111 0.00 0.00 0.00 2.32
1463 1906 2.939103 CTGAGCCCTGCAAATACTACAC 59.061 50.000 0.00 0.00 0.00 2.90
1466 1909 1.663695 CCCTGCAAATACTACACCGG 58.336 55.000 0.00 0.00 0.00 5.28
1491 1934 3.334583 GTGAGTTTCACCTGCCATCTA 57.665 47.619 0.00 0.00 41.37 1.98
1493 1936 4.265073 GTGAGTTTCACCTGCCATCTAAT 58.735 43.478 0.00 0.00 41.37 1.73
1494 1937 4.702131 GTGAGTTTCACCTGCCATCTAATT 59.298 41.667 0.00 0.00 41.37 1.40
1496 1939 5.415701 TGAGTTTCACCTGCCATCTAATTTC 59.584 40.000 0.00 0.00 0.00 2.17
1497 1940 5.574188 AGTTTCACCTGCCATCTAATTTCT 58.426 37.500 0.00 0.00 0.00 2.52
1498 1941 5.416952 AGTTTCACCTGCCATCTAATTTCTG 59.583 40.000 0.00 0.00 0.00 3.02
1499 1942 4.842531 TCACCTGCCATCTAATTTCTGA 57.157 40.909 0.00 0.00 0.00 3.27
1501 1944 4.943705 TCACCTGCCATCTAATTTCTGAAC 59.056 41.667 0.00 0.00 0.00 3.18
1503 1946 3.313526 CCTGCCATCTAATTTCTGAACCG 59.686 47.826 0.00 0.00 0.00 4.44
1504 1947 2.682856 TGCCATCTAATTTCTGAACCGC 59.317 45.455 0.00 0.00 0.00 5.68
1505 1948 2.945668 GCCATCTAATTTCTGAACCGCT 59.054 45.455 0.00 0.00 0.00 5.52
1506 1949 3.242870 GCCATCTAATTTCTGAACCGCTG 60.243 47.826 0.00 0.00 0.00 5.18
1507 1950 4.191544 CCATCTAATTTCTGAACCGCTGA 58.808 43.478 0.00 0.00 0.00 4.26
1509 1952 5.297776 CCATCTAATTTCTGAACCGCTGATT 59.702 40.000 0.00 0.00 0.00 2.57
1514 1961 4.685169 TTTCTGAACCGCTGATTTGATC 57.315 40.909 0.00 0.00 0.00 2.92
1520 1967 3.340814 ACCGCTGATTTGATCTGTTCT 57.659 42.857 0.00 0.00 0.00 3.01
1521 1968 4.471904 ACCGCTGATTTGATCTGTTCTA 57.528 40.909 0.00 0.00 0.00 2.10
1529 1976 4.944962 TTTGATCTGTTCTATGCAACCG 57.055 40.909 0.00 0.00 0.00 4.44
1530 1977 2.279741 TGATCTGTTCTATGCAACCGC 58.720 47.619 0.00 0.00 39.24 5.68
1534 1981 4.137116 TCTGTTCTATGCAACCGCTAAT 57.863 40.909 0.00 0.00 39.64 1.73
1535 1982 4.513442 TCTGTTCTATGCAACCGCTAATT 58.487 39.130 0.00 0.00 39.64 1.40
1536 1983 5.666462 TCTGTTCTATGCAACCGCTAATTA 58.334 37.500 0.00 0.00 39.64 1.40
1537 1984 6.110033 TCTGTTCTATGCAACCGCTAATTAA 58.890 36.000 0.00 0.00 39.64 1.40
1538 1985 6.765989 TCTGTTCTATGCAACCGCTAATTAAT 59.234 34.615 0.00 0.00 39.64 1.40
1562 2009 3.766051 TGATCTCTTCTGTGCAGCTCTTA 59.234 43.478 0.00 0.00 0.00 2.10
1568 2015 0.459237 CTGTGCAGCTCTTAGGTCCG 60.459 60.000 0.00 0.00 0.00 4.79
1574 2021 1.516603 GCTCTTAGGTCCGCGTGTC 60.517 63.158 4.92 0.00 0.00 3.67
1584 2031 2.224217 CCGCGTGTCTATGCTCGTG 61.224 63.158 4.92 0.00 36.66 4.35
1585 2032 1.226295 CGCGTGTCTATGCTCGTGA 60.226 57.895 0.00 0.00 37.86 4.35
1589 2036 2.645163 CGTGTCTATGCTCGTGATCTC 58.355 52.381 0.00 0.00 0.00 2.75
1590 2037 2.289274 CGTGTCTATGCTCGTGATCTCT 59.711 50.000 0.00 0.00 0.00 3.10
1594 2041 3.188460 GTCTATGCTCGTGATCTCTCTCC 59.812 52.174 0.00 0.00 0.00 3.71
1595 2042 0.950836 ATGCTCGTGATCTCTCTCCG 59.049 55.000 0.00 0.00 0.00 4.63
1596 2043 1.008995 GCTCGTGATCTCTCTCCGC 60.009 63.158 0.00 0.00 0.00 5.54
1597 2044 1.652012 CTCGTGATCTCTCTCCGCC 59.348 63.158 0.00 0.00 0.00 6.13
1598 2045 1.791103 CTCGTGATCTCTCTCCGCCC 61.791 65.000 0.00 0.00 0.00 6.13
1599 2046 2.725008 GTGATCTCTCTCCGCCCG 59.275 66.667 0.00 0.00 0.00 6.13
1600 2047 3.219928 TGATCTCTCTCCGCCCGC 61.220 66.667 0.00 0.00 0.00 6.13
1601 2048 3.219928 GATCTCTCTCCGCCCGCA 61.220 66.667 0.00 0.00 0.00 5.69
1602 2049 3.206211 GATCTCTCTCCGCCCGCAG 62.206 68.421 0.00 0.00 0.00 5.18
1643 2090 3.195698 GCAGCCTTCTTACCGCCG 61.196 66.667 0.00 0.00 0.00 6.46
1661 2108 4.832608 CCGCCGACAGCTAACCCC 62.833 72.222 0.00 0.00 40.39 4.95
1669 2116 1.134560 GACAGCTAACCCCGTGAGTAG 59.865 57.143 0.00 0.00 0.00 2.57
1675 2122 3.077556 CCCCGTGAGTAGCTGCCT 61.078 66.667 0.00 0.00 0.00 4.75
1677 2124 1.153549 CCCGTGAGTAGCTGCCTTC 60.154 63.158 0.00 0.00 0.00 3.46
1679 2126 1.591703 CGTGAGTAGCTGCCTTCCA 59.408 57.895 0.00 0.00 0.00 3.53
1681 2128 1.661341 GTGAGTAGCTGCCTTCCATG 58.339 55.000 0.00 0.00 0.00 3.66
1682 2129 1.065854 GTGAGTAGCTGCCTTCCATGT 60.066 52.381 0.00 0.00 0.00 3.21
1683 2130 2.168521 GTGAGTAGCTGCCTTCCATGTA 59.831 50.000 0.00 0.00 0.00 2.29
1694 2399 6.438186 TGCCTTCCATGTATTGATCTCATA 57.562 37.500 0.00 0.00 0.00 2.15
1695 2400 6.233434 TGCCTTCCATGTATTGATCTCATAC 58.767 40.000 8.10 8.10 0.00 2.39
1696 2401 6.183361 TGCCTTCCATGTATTGATCTCATACA 60.183 38.462 16.19 16.19 35.56 2.29
1697 2402 6.883217 GCCTTCCATGTATTGATCTCATACAT 59.117 38.462 18.34 18.34 40.82 2.29
1724 2429 3.164268 TGGTGTCCCCAAGATCAAAATG 58.836 45.455 0.00 0.00 41.50 2.32
1736 2441 7.293745 CCAAGATCAAAATGTATCGTATGAGC 58.706 38.462 0.00 0.00 0.00 4.26
1776 2481 1.070601 GGGCTCCTGCATTTTGTGTTT 59.929 47.619 0.00 0.00 41.91 2.83
1780 2485 4.321899 GGCTCCTGCATTTTGTGTTTATGA 60.322 41.667 0.00 0.00 41.91 2.15
1788 2493 4.481930 TTTTGTGTTTATGAGTGCTCGG 57.518 40.909 0.00 0.00 0.00 4.63
1790 2495 3.945981 TGTGTTTATGAGTGCTCGGTA 57.054 42.857 0.00 0.00 0.00 4.02
1804 2509 1.218316 CGGTAGTGGCAACTCTCCC 59.782 63.158 0.00 0.00 41.51 4.30
1833 2539 2.684881 GGCGACAATGATCACTTCCATT 59.315 45.455 0.00 0.00 33.66 3.16
1849 2555 4.771590 TCCATTGCTTGTGATGTCTTTC 57.228 40.909 0.00 0.00 0.00 2.62
1850 2556 4.143543 TCCATTGCTTGTGATGTCTTTCA 58.856 39.130 0.00 0.00 0.00 2.69
1866 2572 7.439157 TGTCTTTCAACATCACCTTAAGATG 57.561 36.000 3.36 0.00 46.38 2.90
1881 2587 8.031277 CACCTTAAGATGGAATTCCTTTCTTTG 58.969 37.037 30.98 25.28 38.84 2.77
1886 2592 5.718607 AGATGGAATTCCTTTCTTTGGGAAG 59.281 40.000 24.73 0.00 43.64 3.46
1890 2596 1.995376 TCCTTTCTTTGGGAAGGTGC 58.005 50.000 3.37 0.00 35.16 5.01
1918 2624 4.722220 CCTGGAATATCAATGAGCAAGGA 58.278 43.478 0.00 0.00 0.00 3.36
1978 2684 6.459670 TGCAGCAATGAAAGTTATGATGAT 57.540 33.333 0.00 0.00 31.15 2.45
2019 2725 4.798574 ACTTGCTATTTTTGCCTTCTTCG 58.201 39.130 0.00 0.00 0.00 3.79
2024 2730 3.643159 ATTTTTGCCTTCTTCGACCAC 57.357 42.857 0.00 0.00 0.00 4.16
2025 2731 0.941542 TTTTGCCTTCTTCGACCACG 59.058 50.000 0.00 0.00 41.26 4.94
2049 2755 2.176247 ATCCTGGTCGATGGTACCTT 57.824 50.000 14.36 6.75 37.91 3.50
2053 2759 2.159085 CCTGGTCGATGGTACCTTTCTC 60.159 54.545 14.36 4.07 37.91 2.87
2093 2799 7.322664 CACCTGTCACCTTTTGCATATATTTT 58.677 34.615 0.00 0.00 0.00 1.82
2168 2874 8.421249 TTGGACCTCATTGTAATCAAGATTTT 57.579 30.769 0.02 0.00 36.97 1.82
2169 2875 9.527157 TTGGACCTCATTGTAATCAAGATTTTA 57.473 29.630 0.02 0.00 36.97 1.52
2170 2876 9.699410 TGGACCTCATTGTAATCAAGATTTTAT 57.301 29.630 0.02 0.00 36.97 1.40
2173 2879 9.927081 ACCTCATTGTAATCAAGATTTTATCCT 57.073 29.630 0.02 0.00 36.97 3.24
2189 2895 3.515602 ATCCTGTCTTGAAACCTTGCT 57.484 42.857 0.00 0.00 0.00 3.91
2204 2910 9.474313 TGAAACCTTGCTAAAACCTCATAATAT 57.526 29.630 0.00 0.00 0.00 1.28
2244 2950 0.758685 TGTTTGGCTGGTTCCCTTGG 60.759 55.000 0.00 0.00 0.00 3.61
2277 2983 2.879026 CTCGGTCACTAGCATAGCACTA 59.121 50.000 0.00 0.00 44.39 2.74
2457 3163 4.016444 GAGTCCATGGAAGGTTGCAAATA 58.984 43.478 18.20 0.00 30.51 1.40
2460 3166 4.160252 GTCCATGGAAGGTTGCAAATATGT 59.840 41.667 18.20 0.00 30.51 2.29
2461 3167 4.160065 TCCATGGAAGGTTGCAAATATGTG 59.840 41.667 13.46 0.00 30.51 3.21
2465 3171 7.417683 CCATGGAAGGTTGCAAATATGTGAATA 60.418 37.037 5.56 0.00 30.51 1.75
2506 3212 5.422331 AGAAACGGAAGAGGAGTATGAATCA 59.578 40.000 0.00 0.00 0.00 2.57
2558 3264 4.564372 CCTGATCTATGTGTTGTTGACTCG 59.436 45.833 0.00 0.00 0.00 4.18
2559 3265 5.134202 TGATCTATGTGTTGTTGACTCGT 57.866 39.130 0.00 0.00 0.00 4.18
2565 3271 3.649073 TGTGTTGTTGACTCGTAGGATG 58.351 45.455 0.00 0.00 0.00 3.51
2574 3280 3.069016 TGACTCGTAGGATGTGTTTGTGT 59.931 43.478 0.00 0.00 0.00 3.72
2575 3281 4.056050 GACTCGTAGGATGTGTTTGTGTT 58.944 43.478 0.00 0.00 0.00 3.32
2581 3287 4.156455 AGGATGTGTTTGTGTTCACTCT 57.844 40.909 4.59 0.00 35.82 3.24
2588 3294 5.647658 TGTGTTTGTGTTCACTCTCAAGATT 59.352 36.000 4.59 0.00 35.82 2.40
2612 3321 3.213206 TGTGCTTGTGTTTCCTCTCAT 57.787 42.857 0.00 0.00 0.00 2.90
2640 3349 0.037160 GGCCGGGTGTTTCTCCTAAA 59.963 55.000 2.18 0.00 0.00 1.85
2671 3380 4.509600 GTCCAGAGTTAAGTAGATGCATGC 59.490 45.833 11.82 11.82 0.00 4.06
2672 3381 3.812053 CCAGAGTTAAGTAGATGCATGCC 59.188 47.826 16.68 0.00 0.00 4.40
2673 3382 3.812053 CAGAGTTAAGTAGATGCATGCCC 59.188 47.826 16.68 7.18 0.00 5.36
2674 3383 3.455910 AGAGTTAAGTAGATGCATGCCCA 59.544 43.478 16.68 0.00 0.00 5.36
2675 3384 3.812053 GAGTTAAGTAGATGCATGCCCAG 59.188 47.826 16.68 0.00 0.00 4.45
2676 3385 3.455910 AGTTAAGTAGATGCATGCCCAGA 59.544 43.478 16.68 0.00 0.00 3.86
2677 3386 2.634815 AAGTAGATGCATGCCCAGAG 57.365 50.000 16.68 0.00 0.00 3.35
2678 3387 1.504912 AGTAGATGCATGCCCAGAGT 58.495 50.000 16.68 0.00 0.00 3.24
2679 3388 1.842562 AGTAGATGCATGCCCAGAGTT 59.157 47.619 16.68 0.00 0.00 3.01
2680 3389 3.041211 AGTAGATGCATGCCCAGAGTTA 58.959 45.455 16.68 0.00 0.00 2.24
2681 3390 3.649981 AGTAGATGCATGCCCAGAGTTAT 59.350 43.478 16.68 0.00 0.00 1.89
2682 3391 3.589951 AGATGCATGCCCAGAGTTATT 57.410 42.857 16.68 0.00 0.00 1.40
2683 3392 3.907221 AGATGCATGCCCAGAGTTATTT 58.093 40.909 16.68 0.00 0.00 1.40
2684 3393 4.284178 AGATGCATGCCCAGAGTTATTTT 58.716 39.130 16.68 0.00 0.00 1.82
2685 3394 4.713321 AGATGCATGCCCAGAGTTATTTTT 59.287 37.500 16.68 0.00 0.00 1.94
2708 3417 2.372172 GTCCAAAGTTTCCTCTGGGAGA 59.628 50.000 0.00 0.00 43.29 3.71
2722 3431 5.028549 TCTGGGAGATTAGAAAGCATGTC 57.971 43.478 0.00 0.00 0.00 3.06
2750 3459 8.400184 TGTTCTCATCATTTTTCTGAATCTGT 57.600 30.769 0.00 0.00 0.00 3.41
2751 3460 9.506018 TGTTCTCATCATTTTTCTGAATCTGTA 57.494 29.630 0.00 0.00 0.00 2.74
2784 3493 4.111255 TCAGTGGGAAATTTGATGTGGA 57.889 40.909 0.00 0.00 0.00 4.02
2802 3511 8.733458 TGATGTGGATGAGAAAAATCTTTACTG 58.267 33.333 0.00 0.00 0.00 2.74
2804 3513 8.463930 TGTGGATGAGAAAAATCTTTACTGTT 57.536 30.769 0.00 0.00 0.00 3.16
2882 3592 5.565695 GCATTTTGCAATTTGATCACATCC 58.434 37.500 0.00 0.00 44.26 3.51
2883 3593 5.353123 GCATTTTGCAATTTGATCACATCCT 59.647 36.000 0.00 0.00 44.26 3.24
2884 3594 6.456449 GCATTTTGCAATTTGATCACATCCTC 60.456 38.462 0.00 0.00 44.26 3.71
2885 3595 4.724074 TTGCAATTTGATCACATCCTCC 57.276 40.909 0.00 0.00 0.00 4.30
2886 3596 3.025978 TGCAATTTGATCACATCCTCCC 58.974 45.455 0.00 0.00 0.00 4.30
2887 3597 3.294214 GCAATTTGATCACATCCTCCCT 58.706 45.455 0.00 0.00 0.00 4.20
2888 3598 3.317430 GCAATTTGATCACATCCTCCCTC 59.683 47.826 0.00 0.00 0.00 4.30
2889 3599 3.872459 ATTTGATCACATCCTCCCTCC 57.128 47.619 0.00 0.00 0.00 4.30
2890 3600 1.123077 TTGATCACATCCTCCCTCCG 58.877 55.000 0.00 0.00 0.00 4.63
2891 3601 0.032117 TGATCACATCCTCCCTCCGT 60.032 55.000 0.00 0.00 0.00 4.69
2892 3602 0.676736 GATCACATCCTCCCTCCGTC 59.323 60.000 0.00 0.00 0.00 4.79
2893 3603 0.760945 ATCACATCCTCCCTCCGTCC 60.761 60.000 0.00 0.00 0.00 4.79
2894 3604 2.442272 ACATCCTCCCTCCGTCCG 60.442 66.667 0.00 0.00 0.00 4.79
2895 3605 2.123854 CATCCTCCCTCCGTCCGA 60.124 66.667 0.00 0.00 0.00 4.55
2896 3606 1.756950 CATCCTCCCTCCGTCCGAA 60.757 63.158 0.00 0.00 0.00 4.30
2897 3607 1.001248 ATCCTCCCTCCGTCCGAAA 59.999 57.895 0.00 0.00 0.00 3.46
2898 3608 0.616679 ATCCTCCCTCCGTCCGAAAA 60.617 55.000 0.00 0.00 0.00 2.29
2899 3609 0.832983 TCCTCCCTCCGTCCGAAAAA 60.833 55.000 0.00 0.00 0.00 1.94
2900 3610 0.391263 CCTCCCTCCGTCCGAAAAAG 60.391 60.000 0.00 0.00 0.00 2.27
2901 3611 0.320697 CTCCCTCCGTCCGAAAAAGT 59.679 55.000 0.00 0.00 0.00 2.66
2902 3612 0.760572 TCCCTCCGTCCGAAAAAGTT 59.239 50.000 0.00 0.00 0.00 2.66
2903 3613 1.141455 TCCCTCCGTCCGAAAAAGTTT 59.859 47.619 0.00 0.00 0.00 2.66
2904 3614 1.265905 CCCTCCGTCCGAAAAAGTTTG 59.734 52.381 0.00 0.00 0.00 2.93
2905 3615 1.944709 CCTCCGTCCGAAAAAGTTTGT 59.055 47.619 0.00 0.00 0.00 2.83
2906 3616 2.032290 CCTCCGTCCGAAAAAGTTTGTC 60.032 50.000 0.00 0.00 0.00 3.18
2907 3617 1.941975 TCCGTCCGAAAAAGTTTGTCC 59.058 47.619 0.00 0.00 0.00 4.02
2908 3618 1.002142 CCGTCCGAAAAAGTTTGTCCC 60.002 52.381 0.00 0.00 0.00 4.46
2909 3619 1.944709 CGTCCGAAAAAGTTTGTCCCT 59.055 47.619 0.00 0.00 0.00 4.20
2910 3620 2.032290 CGTCCGAAAAAGTTTGTCCCTC 60.032 50.000 0.00 0.00 0.00 4.30
2911 3621 2.946990 GTCCGAAAAAGTTTGTCCCTCA 59.053 45.455 0.00 0.00 0.00 3.86
2912 3622 3.379057 GTCCGAAAAAGTTTGTCCCTCAA 59.621 43.478 0.00 0.00 0.00 3.02
2913 3623 4.017808 TCCGAAAAAGTTTGTCCCTCAAA 58.982 39.130 0.00 0.00 42.79 2.69
2914 3624 4.647399 TCCGAAAAAGTTTGTCCCTCAAAT 59.353 37.500 0.00 0.00 45.88 2.32
2915 3625 4.744631 CCGAAAAAGTTTGTCCCTCAAATG 59.255 41.667 0.00 0.00 45.88 2.32
2916 3626 4.744631 CGAAAAAGTTTGTCCCTCAAATGG 59.255 41.667 0.00 0.00 45.88 3.16
2917 3627 5.451242 CGAAAAAGTTTGTCCCTCAAATGGA 60.451 40.000 0.00 0.00 45.88 3.41
2918 3628 6.499106 AAAAAGTTTGTCCCTCAAATGGAT 57.501 33.333 0.00 0.00 45.88 3.41
2919 3629 5.473066 AAAGTTTGTCCCTCAAATGGATG 57.527 39.130 0.00 0.00 45.88 3.51
2920 3630 4.118168 AGTTTGTCCCTCAAATGGATGT 57.882 40.909 0.00 0.00 45.88 3.06
2921 3631 5.255397 AGTTTGTCCCTCAAATGGATGTA 57.745 39.130 0.00 0.00 45.88 2.29
2922 3632 5.831103 AGTTTGTCCCTCAAATGGATGTAT 58.169 37.500 0.00 0.00 45.88 2.29
2923 3633 5.888161 AGTTTGTCCCTCAAATGGATGTATC 59.112 40.000 0.00 0.00 45.88 2.24
2924 3634 5.715439 TTGTCCCTCAAATGGATGTATCT 57.285 39.130 0.00 0.00 33.65 1.98
2925 3635 5.296151 TGTCCCTCAAATGGATGTATCTC 57.704 43.478 0.00 0.00 33.65 2.75
2926 3636 4.721274 TGTCCCTCAAATGGATGTATCTCA 59.279 41.667 0.00 0.00 33.65 3.27
2927 3637 5.370584 TGTCCCTCAAATGGATGTATCTCAT 59.629 40.000 0.00 0.00 39.77 2.90
2928 3638 7.906738 TTGTCCCTCAAATGGATGTATCTCATC 60.907 40.741 0.00 0.00 41.15 2.92
2944 3654 3.618351 CTCATCATTTGAGGGACAAGCT 58.382 45.455 0.00 0.00 46.89 3.74
2945 3655 4.015084 CTCATCATTTGAGGGACAAGCTT 58.985 43.478 0.00 0.00 46.89 3.74
2946 3656 3.760151 TCATCATTTGAGGGACAAGCTTG 59.240 43.478 24.84 24.84 39.77 4.01
2947 3657 2.517959 TCATTTGAGGGACAAGCTTGG 58.482 47.619 29.18 12.28 39.77 3.61
2948 3658 1.547372 CATTTGAGGGACAAGCTTGGG 59.453 52.381 29.18 6.83 39.77 4.12
2949 3659 0.850100 TTTGAGGGACAAGCTTGGGA 59.150 50.000 29.18 4.51 39.77 4.37
2950 3660 0.110486 TTGAGGGACAAGCTTGGGAC 59.890 55.000 29.18 18.90 34.20 4.46
2951 3661 1.059584 TGAGGGACAAGCTTGGGACA 61.060 55.000 29.18 17.71 0.00 4.02
2952 3662 4.092026 TTGAGGGACAAGCTTGGGACAA 62.092 50.000 29.18 21.59 37.48 3.18
2953 3663 5.893518 TTGAGGGACAAGCTTGGGACAAG 62.894 52.174 29.18 3.71 37.48 3.16
2998 3708 2.724977 TGGTTCTCTGCACGTCTAAG 57.275 50.000 0.00 0.00 0.00 2.18
3099 3813 7.645058 TTTCTTGACAGAAATCCACTCTTTT 57.355 32.000 0.00 0.00 42.99 2.27
3100 3814 6.867662 TCTTGACAGAAATCCACTCTTTTC 57.132 37.500 0.00 0.00 33.08 2.29
3101 3815 5.765182 TCTTGACAGAAATCCACTCTTTTCC 59.235 40.000 0.00 0.00 33.30 3.13
3102 3816 5.047566 TGACAGAAATCCACTCTTTTCCA 57.952 39.130 0.00 0.00 33.30 3.53
3103 3817 5.445069 TGACAGAAATCCACTCTTTTCCAA 58.555 37.500 0.00 0.00 33.30 3.53
3104 3818 6.070656 TGACAGAAATCCACTCTTTTCCAAT 58.929 36.000 0.00 0.00 33.30 3.16
3105 3819 6.207417 TGACAGAAATCCACTCTTTTCCAATC 59.793 38.462 0.00 0.00 33.30 2.67
3106 3820 5.478332 ACAGAAATCCACTCTTTTCCAATCC 59.522 40.000 0.00 0.00 33.30 3.01
3107 3821 4.702131 AGAAATCCACTCTTTTCCAATCCG 59.298 41.667 0.00 0.00 33.30 4.18
3108 3822 4.301072 AATCCACTCTTTTCCAATCCGA 57.699 40.909 0.00 0.00 0.00 4.55
3109 3823 3.053831 TCCACTCTTTTCCAATCCGAC 57.946 47.619 0.00 0.00 0.00 4.79
3110 3824 2.637872 TCCACTCTTTTCCAATCCGACT 59.362 45.455 0.00 0.00 0.00 4.18
3111 3825 2.744202 CCACTCTTTTCCAATCCGACTG 59.256 50.000 0.00 0.00 0.00 3.51
3112 3826 2.744202 CACTCTTTTCCAATCCGACTGG 59.256 50.000 0.00 0.00 35.05 4.00
3121 3835 3.183287 TCCGACTGGACCACCCTA 58.817 61.111 0.00 0.00 40.17 3.53
3122 3836 1.000019 TCCGACTGGACCACCCTAG 60.000 63.158 0.00 0.00 40.17 3.02
3123 3837 1.305046 CCGACTGGACCACCCTAGT 60.305 63.158 0.00 0.00 37.49 2.57
3124 3838 1.321074 CCGACTGGACCACCCTAGTC 61.321 65.000 0.00 0.00 38.54 2.59
3125 3839 0.611062 CGACTGGACCACCCTAGTCA 60.611 60.000 10.46 0.00 40.24 3.41
3126 3840 1.187087 GACTGGACCACCCTAGTCAG 58.813 60.000 6.05 0.00 40.11 3.51
3127 3841 0.252284 ACTGGACCACCCTAGTCAGG 60.252 60.000 0.00 0.00 42.22 3.86
3128 3842 0.041238 CTGGACCACCCTAGTCAGGA 59.959 60.000 0.00 0.00 45.91 3.86
3129 3843 0.490017 TGGACCACCCTAGTCAGGAA 59.510 55.000 0.00 0.00 45.91 3.36
3130 3844 0.903236 GGACCACCCTAGTCAGGAAC 59.097 60.000 0.00 0.00 45.91 3.62
3131 3845 0.903236 GACCACCCTAGTCAGGAACC 59.097 60.000 0.00 0.00 45.91 3.62
3132 3846 0.192566 ACCACCCTAGTCAGGAACCA 59.807 55.000 0.00 0.00 45.91 3.67
3133 3847 1.358152 CCACCCTAGTCAGGAACCAA 58.642 55.000 0.00 0.00 45.91 3.67
3134 3848 1.279271 CCACCCTAGTCAGGAACCAAG 59.721 57.143 0.00 0.00 45.91 3.61
3135 3849 1.279271 CACCCTAGTCAGGAACCAAGG 59.721 57.143 0.00 0.00 45.91 3.61
3136 3850 1.151413 ACCCTAGTCAGGAACCAAGGA 59.849 52.381 0.00 0.00 45.91 3.36
3137 3851 2.266279 CCCTAGTCAGGAACCAAGGAA 58.734 52.381 0.00 0.00 45.91 3.36
3138 3852 2.846827 CCCTAGTCAGGAACCAAGGAAT 59.153 50.000 0.00 0.00 45.91 3.01
3139 3853 3.267031 CCCTAGTCAGGAACCAAGGAATT 59.733 47.826 0.00 0.00 45.91 2.17
3140 3854 4.473559 CCCTAGTCAGGAACCAAGGAATTA 59.526 45.833 0.00 0.00 45.91 1.40
3141 3855 5.429130 CCTAGTCAGGAACCAAGGAATTAC 58.571 45.833 0.00 0.00 45.91 1.89
3142 3856 4.993705 AGTCAGGAACCAAGGAATTACA 57.006 40.909 0.00 0.00 0.00 2.41
3143 3857 5.520748 AGTCAGGAACCAAGGAATTACAT 57.479 39.130 0.00 0.00 0.00 2.29
3144 3858 5.501156 AGTCAGGAACCAAGGAATTACATC 58.499 41.667 0.00 0.00 0.00 3.06
3145 3859 5.014123 AGTCAGGAACCAAGGAATTACATCA 59.986 40.000 0.00 0.00 0.00 3.07
3146 3860 5.710099 GTCAGGAACCAAGGAATTACATCAA 59.290 40.000 0.00 0.00 0.00 2.57
3147 3861 6.208599 GTCAGGAACCAAGGAATTACATCAAA 59.791 38.462 0.00 0.00 0.00 2.69
3148 3862 6.780031 TCAGGAACCAAGGAATTACATCAAAA 59.220 34.615 0.00 0.00 0.00 2.44
3149 3863 7.039784 TCAGGAACCAAGGAATTACATCAAAAG 60.040 37.037 0.00 0.00 0.00 2.27
3150 3864 7.010160 AGGAACCAAGGAATTACATCAAAAGA 58.990 34.615 0.00 0.00 0.00 2.52
3151 3865 7.177392 AGGAACCAAGGAATTACATCAAAAGAG 59.823 37.037 0.00 0.00 0.00 2.85
3152 3866 6.272822 ACCAAGGAATTACATCAAAAGAGC 57.727 37.500 0.00 0.00 0.00 4.09
3153 3867 5.185828 ACCAAGGAATTACATCAAAAGAGCC 59.814 40.000 0.00 0.00 0.00 4.70
3154 3868 5.420104 CCAAGGAATTACATCAAAAGAGCCT 59.580 40.000 0.00 0.00 0.00 4.58
3155 3869 6.405176 CCAAGGAATTACATCAAAAGAGCCTC 60.405 42.308 0.00 0.00 0.00 4.70
3156 3870 6.072199 AGGAATTACATCAAAAGAGCCTCT 57.928 37.500 0.00 0.00 0.00 3.69
3157 3871 6.118852 AGGAATTACATCAAAAGAGCCTCTC 58.881 40.000 0.00 0.00 0.00 3.20
3158 3872 6.069731 AGGAATTACATCAAAAGAGCCTCTCT 60.070 38.462 0.00 0.00 43.37 3.10
3518 4232 9.965902 AAGAAATATAAGAGTGTTTGGATCACT 57.034 29.630 0.00 0.00 46.86 3.41
3525 4239 9.877178 ATAAGAGTGTTTGGATCACTACTTTAG 57.123 33.333 0.00 0.00 44.68 1.85
3526 4240 7.304497 AGAGTGTTTGGATCACTACTTTAGT 57.696 36.000 0.00 0.00 44.68 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 9.859427 CAAAATTGGCTTTGACTATTCATAAGA 57.141 29.630 8.27 0.00 38.35 2.10
4 5 9.859427 TCAAAATTGGCTTTGACTATTCATAAG 57.141 29.630 0.00 0.00 39.74 1.73
7 8 9.558396 TTTTCAAAATTGGCTTTGACTATTCAT 57.442 25.926 0.40 0.00 43.29 2.57
8 9 8.954950 TTTTCAAAATTGGCTTTGACTATTCA 57.045 26.923 0.40 0.00 43.29 2.57
9 10 9.650371 GTTTTTCAAAATTGGCTTTGACTATTC 57.350 29.630 0.40 0.00 43.29 1.75
10 11 9.171877 TGTTTTTCAAAATTGGCTTTGACTATT 57.828 25.926 0.40 0.00 43.29 1.73
11 12 8.611757 GTGTTTTTCAAAATTGGCTTTGACTAT 58.388 29.630 0.40 0.00 43.29 2.12
12 13 7.604164 TGTGTTTTTCAAAATTGGCTTTGACTA 59.396 29.630 0.40 0.00 43.29 2.59
13 14 6.429385 TGTGTTTTTCAAAATTGGCTTTGACT 59.571 30.769 0.40 0.00 43.29 3.41
14 15 6.606768 TGTGTTTTTCAAAATTGGCTTTGAC 58.393 32.000 0.40 0.00 43.29 3.18
15 16 6.808008 TGTGTTTTTCAAAATTGGCTTTGA 57.192 29.167 0.00 0.00 42.21 2.69
16 17 9.224058 CTAATGTGTTTTTCAAAATTGGCTTTG 57.776 29.630 0.00 0.00 37.59 2.77
17 18 8.404765 CCTAATGTGTTTTTCAAAATTGGCTTT 58.595 29.630 0.00 0.00 0.00 3.51
18 19 7.468494 GCCTAATGTGTTTTTCAAAATTGGCTT 60.468 33.333 0.00 0.00 33.04 4.35
19 20 6.017192 GCCTAATGTGTTTTTCAAAATTGGCT 60.017 34.615 0.00 0.00 33.04 4.75
20 21 6.142139 GCCTAATGTGTTTTTCAAAATTGGC 58.858 36.000 0.00 0.00 31.05 4.52
21 22 6.293900 GGGCCTAATGTGTTTTTCAAAATTGG 60.294 38.462 0.84 0.00 0.00 3.16
22 23 6.293900 GGGGCCTAATGTGTTTTTCAAAATTG 60.294 38.462 0.84 0.00 0.00 2.32
23 24 5.767665 GGGGCCTAATGTGTTTTTCAAAATT 59.232 36.000 0.84 0.00 0.00 1.82
24 25 5.163152 TGGGGCCTAATGTGTTTTTCAAAAT 60.163 36.000 0.84 0.00 0.00 1.82
25 26 4.164221 TGGGGCCTAATGTGTTTTTCAAAA 59.836 37.500 0.84 0.00 0.00 2.44
26 27 3.711704 TGGGGCCTAATGTGTTTTTCAAA 59.288 39.130 0.84 0.00 0.00 2.69
27 28 3.309296 TGGGGCCTAATGTGTTTTTCAA 58.691 40.909 0.84 0.00 0.00 2.69
28 29 2.964209 TGGGGCCTAATGTGTTTTTCA 58.036 42.857 0.84 0.00 0.00 2.69
29 30 5.869649 ATATGGGGCCTAATGTGTTTTTC 57.130 39.130 0.84 0.00 0.00 2.29
31 32 9.920946 CTATATATATGGGGCCTAATGTGTTTT 57.079 33.333 0.84 0.00 0.00 2.43
32 33 9.291516 TCTATATATATGGGGCCTAATGTGTTT 57.708 33.333 0.84 0.00 0.00 2.83
33 34 8.869986 TCTATATATATGGGGCCTAATGTGTT 57.130 34.615 0.84 0.00 0.00 3.32
34 35 8.884323 CATCTATATATATGGGGCCTAATGTGT 58.116 37.037 0.84 0.00 0.00 3.72
35 36 8.324306 CCATCTATATATATGGGGCCTAATGTG 58.676 40.741 16.09 0.00 39.23 3.21
36 37 8.248771 TCCATCTATATATATGGGGCCTAATGT 58.751 37.037 21.13 0.00 42.51 2.71
37 38 8.685257 TCCATCTATATATATGGGGCCTAATG 57.315 38.462 21.13 1.78 42.51 1.90
38 39 7.908917 CCTCCATCTATATATATGGGGCCTAAT 59.091 40.741 21.13 0.00 41.67 1.73
39 40 7.256399 CCTCCATCTATATATATGGGGCCTAA 58.744 42.308 21.13 5.84 41.67 2.69
40 41 6.241181 CCCTCCATCTATATATATGGGGCCTA 60.241 46.154 21.13 0.00 41.67 3.93
41 42 5.463272 CCCTCCATCTATATATATGGGGCCT 60.463 48.000 21.13 0.00 41.67 5.19
42 43 4.785376 CCCTCCATCTATATATATGGGGCC 59.215 50.000 21.13 0.00 41.67 5.80
43 44 5.665701 TCCCTCCATCTATATATATGGGGC 58.334 45.833 21.13 0.00 41.67 5.80
44 45 6.879922 ACTCCCTCCATCTATATATATGGGG 58.120 44.000 21.13 18.99 42.51 4.96
53 54 9.249850 TGGATGTATATACTCCCTCCATCTATA 57.750 37.037 19.96 4.18 0.00 1.31
54 55 8.131052 TGGATGTATATACTCCCTCCATCTAT 57.869 38.462 19.96 2.66 0.00 1.98
55 56 7.539798 TGGATGTATATACTCCCTCCATCTA 57.460 40.000 19.96 8.27 0.00 1.98
56 57 6.423358 TGGATGTATATACTCCCTCCATCT 57.577 41.667 19.96 0.00 0.00 2.90
57 58 8.811017 CATATGGATGTATATACTCCCTCCATC 58.189 40.741 25.87 15.43 40.31 3.51
58 59 8.299871 ACATATGGATGTATATACTCCCTCCAT 58.700 37.037 25.64 25.64 44.77 3.41
59 60 7.662083 ACATATGGATGTATATACTCCCTCCA 58.338 38.462 19.78 19.78 44.77 3.86
75 76 9.791801 TGCATTACAAACTACATACATATGGAT 57.208 29.630 7.80 0.00 38.00 3.41
76 77 9.620259 TTGCATTACAAACTACATACATATGGA 57.380 29.630 7.80 0.00 35.09 3.41
81 82 9.618890 AGAGATTGCATTACAAACTACATACAT 57.381 29.630 0.00 0.00 41.09 2.29
118 119 6.075519 CGAGCGTATTGACTGTTCATAAGTAC 60.076 42.308 0.00 0.00 0.00 2.73
121 122 5.034797 TCGAGCGTATTGACTGTTCATAAG 58.965 41.667 0.00 0.00 0.00 1.73
154 155 7.349711 GGCTTGCGAGATCGTTTTATAATTTA 58.650 34.615 4.70 0.00 42.22 1.40
210 211 2.777832 ATGGCTTCTCTGTCTTGGTC 57.222 50.000 0.00 0.00 0.00 4.02
260 261 3.138798 GCTCTGGCTGCCACCATG 61.139 66.667 19.30 8.42 39.54 3.66
270 271 4.792804 GAGTGGCCTGGCTCTGGC 62.793 72.222 19.68 12.63 45.73 4.85
271 272 4.463879 CGAGTGGCCTGGCTCTGG 62.464 72.222 19.68 14.04 0.00 3.86
277 284 3.625897 TGTGACCGAGTGGCCTGG 61.626 66.667 3.32 3.04 39.70 4.45
337 344 1.031571 AGAGAGGACGAGCTGAGCTG 61.032 60.000 13.71 7.04 39.88 4.24
338 345 0.323360 AAGAGAGGACGAGCTGAGCT 60.323 55.000 6.69 6.69 43.88 4.09
339 346 0.530288 AAAGAGAGGACGAGCTGAGC 59.470 55.000 0.00 0.00 0.00 4.26
340 347 3.013921 AGTAAAGAGAGGACGAGCTGAG 58.986 50.000 0.00 0.00 0.00 3.35
341 348 2.750166 CAGTAAAGAGAGGACGAGCTGA 59.250 50.000 0.00 0.00 0.00 4.26
342 349 2.490115 ACAGTAAAGAGAGGACGAGCTG 59.510 50.000 0.00 0.00 0.00 4.24
343 350 2.797786 ACAGTAAAGAGAGGACGAGCT 58.202 47.619 0.00 0.00 0.00 4.09
344 351 3.579335 AACAGTAAAGAGAGGACGAGC 57.421 47.619 0.00 0.00 0.00 5.03
345 352 5.379732 AGAAACAGTAAAGAGAGGACGAG 57.620 43.478 0.00 0.00 0.00 4.18
346 353 5.535406 AGAAGAAACAGTAAAGAGAGGACGA 59.465 40.000 0.00 0.00 0.00 4.20
363 370 4.775253 GGAAGAGAGGAGGAAGAGAAGAAA 59.225 45.833 0.00 0.00 0.00 2.52
383 394 2.660064 GCTGAGGCTTCGAGGGGAA 61.660 63.158 0.00 0.00 35.22 3.97
407 418 0.694771 TCCATGGCTGAAGCTGTCTT 59.305 50.000 6.96 0.00 41.70 3.01
410 421 1.378250 GCTCCATGGCTGAAGCTGT 60.378 57.895 14.38 0.00 41.70 4.40
411 422 2.119655 GGCTCCATGGCTGAAGCTG 61.120 63.158 19.42 0.00 41.70 4.24
412 423 1.934459 ATGGCTCCATGGCTGAAGCT 61.934 55.000 19.42 1.88 42.34 3.74
413 424 0.179009 TATGGCTCCATGGCTGAAGC 60.179 55.000 13.50 13.50 42.34 3.86
414 425 1.952296 GTTATGGCTCCATGGCTGAAG 59.048 52.381 6.96 0.00 42.34 3.02
415 426 1.565759 AGTTATGGCTCCATGGCTGAA 59.434 47.619 6.96 0.00 42.34 3.02
416 427 1.141657 GAGTTATGGCTCCATGGCTGA 59.858 52.381 6.96 0.00 42.34 4.26
417 428 1.602311 GAGTTATGGCTCCATGGCTG 58.398 55.000 6.96 3.33 42.34 4.85
425 436 2.290577 GGGATGGATGGAGTTATGGCTC 60.291 54.545 0.00 0.00 34.89 4.70
426 437 1.707427 GGGATGGATGGAGTTATGGCT 59.293 52.381 0.00 0.00 0.00 4.75
427 438 1.272147 GGGGATGGATGGAGTTATGGC 60.272 57.143 0.00 0.00 0.00 4.40
428 439 2.065007 TGGGGATGGATGGAGTTATGG 58.935 52.381 0.00 0.00 0.00 2.74
429 440 3.395607 TCTTGGGGATGGATGGAGTTATG 59.604 47.826 0.00 0.00 0.00 1.90
430 441 3.654806 CTCTTGGGGATGGATGGAGTTAT 59.345 47.826 0.00 0.00 0.00 1.89
431 442 3.048600 CTCTTGGGGATGGATGGAGTTA 58.951 50.000 0.00 0.00 0.00 2.24
432 443 1.849039 CTCTTGGGGATGGATGGAGTT 59.151 52.381 0.00 0.00 0.00 3.01
433 444 1.516110 CTCTTGGGGATGGATGGAGT 58.484 55.000 0.00 0.00 0.00 3.85
434 445 0.110104 GCTCTTGGGGATGGATGGAG 59.890 60.000 0.00 0.00 0.00 3.86
435 446 0.327867 AGCTCTTGGGGATGGATGGA 60.328 55.000 0.00 0.00 0.00 3.41
447 458 1.172175 GCTTGAGGGGAAAGCTCTTG 58.828 55.000 1.01 0.00 45.31 3.02
772 784 4.508128 TCGACGCGGATCTTGGGC 62.508 66.667 12.47 0.00 0.00 5.36
773 785 1.447140 TTTCGACGCGGATCTTGGG 60.447 57.895 12.47 0.00 0.00 4.12
774 786 1.708027 GTTTCGACGCGGATCTTGG 59.292 57.895 12.47 0.00 0.00 3.61
775 787 1.068832 TCGTTTCGACGCGGATCTTG 61.069 55.000 12.47 0.00 0.00 3.02
776 788 0.797249 CTCGTTTCGACGCGGATCTT 60.797 55.000 12.47 0.00 0.00 2.40
777 789 1.226323 CTCGTTTCGACGCGGATCT 60.226 57.895 12.47 0.00 0.00 2.75
778 790 2.846793 GCTCGTTTCGACGCGGATC 61.847 63.158 12.47 0.00 0.00 3.36
779 791 2.879462 GCTCGTTTCGACGCGGAT 60.879 61.111 12.47 0.00 0.00 4.18
782 794 3.179265 ATGGCTCGTTTCGACGCG 61.179 61.111 3.53 3.53 33.41 6.01
783 795 2.395690 CATGGCTCGTTTCGACGC 59.604 61.111 0.00 0.00 32.46 5.19
784 796 2.452813 CCCATGGCTCGTTTCGACG 61.453 63.158 6.09 0.00 0.00 5.12
785 797 1.079405 TCCCATGGCTCGTTTCGAC 60.079 57.895 6.09 0.00 0.00 4.20
786 798 1.218047 CTCCCATGGCTCGTTTCGA 59.782 57.895 6.09 0.00 0.00 3.71
787 799 1.815421 CCTCCCATGGCTCGTTTCG 60.815 63.158 6.09 0.00 0.00 3.46
788 800 0.539986 TACCTCCCATGGCTCGTTTC 59.460 55.000 6.09 0.00 0.00 2.78
789 801 0.541863 CTACCTCCCATGGCTCGTTT 59.458 55.000 6.09 0.00 0.00 3.60
790 802 0.617820 ACTACCTCCCATGGCTCGTT 60.618 55.000 6.09 0.00 0.00 3.85
791 803 0.260816 TACTACCTCCCATGGCTCGT 59.739 55.000 6.09 3.56 0.00 4.18
792 804 1.273606 CATACTACCTCCCATGGCTCG 59.726 57.143 6.09 0.00 0.00 5.03
796 808 1.349026 CCAGCATACTACCTCCCATGG 59.651 57.143 4.14 4.14 0.00 3.66
807 819 1.267121 ACAACGGAGTCCAGCATACT 58.733 50.000 10.49 0.00 45.00 2.12
808 820 1.732259 CAACAACGGAGTCCAGCATAC 59.268 52.381 10.49 0.00 45.00 2.39
809 821 1.346395 ACAACAACGGAGTCCAGCATA 59.654 47.619 10.49 0.00 45.00 3.14
811 823 0.753867 TACAACAACGGAGTCCAGCA 59.246 50.000 10.49 0.00 45.00 4.41
812 824 1.798813 CTTACAACAACGGAGTCCAGC 59.201 52.381 10.49 0.00 45.00 4.85
814 826 2.036733 CCTCTTACAACAACGGAGTCCA 59.963 50.000 10.49 0.00 45.00 4.02
816 828 3.315418 GACCTCTTACAACAACGGAGTC 58.685 50.000 0.00 0.00 45.00 3.36
819 831 1.682854 ACGACCTCTTACAACAACGGA 59.317 47.619 0.00 0.00 0.00 4.69
820 832 2.144482 ACGACCTCTTACAACAACGG 57.856 50.000 0.00 0.00 0.00 4.44
822 834 3.619929 ACACAACGACCTCTTACAACAAC 59.380 43.478 0.00 0.00 0.00 3.32
823 835 3.864243 ACACAACGACCTCTTACAACAA 58.136 40.909 0.00 0.00 0.00 2.83
824 836 3.530265 ACACAACGACCTCTTACAACA 57.470 42.857 0.00 0.00 0.00 3.33
826 838 4.395959 AGAACACAACGACCTCTTACAA 57.604 40.909 0.00 0.00 0.00 2.41
827 839 4.142116 TGAAGAACACAACGACCTCTTACA 60.142 41.667 0.00 0.00 0.00 2.41
829 841 4.617959 CTGAAGAACACAACGACCTCTTA 58.382 43.478 0.00 0.00 0.00 2.10
830 842 3.458189 CTGAAGAACACAACGACCTCTT 58.542 45.455 0.00 0.00 0.00 2.85
831 843 2.803492 GCTGAAGAACACAACGACCTCT 60.803 50.000 0.00 0.00 0.00 3.69
832 844 1.527311 GCTGAAGAACACAACGACCTC 59.473 52.381 0.00 0.00 0.00 3.85
833 845 1.139058 AGCTGAAGAACACAACGACCT 59.861 47.619 0.00 0.00 0.00 3.85
834 846 1.527311 GAGCTGAAGAACACAACGACC 59.473 52.381 0.00 0.00 0.00 4.79
835 847 2.033662 GTGAGCTGAAGAACACAACGAC 60.034 50.000 0.00 0.00 34.05 4.34
836 848 2.201732 GTGAGCTGAAGAACACAACGA 58.798 47.619 0.00 0.00 34.05 3.85
837 849 1.071239 CGTGAGCTGAAGAACACAACG 60.071 52.381 0.00 0.00 33.56 4.10
838 850 1.261619 CCGTGAGCTGAAGAACACAAC 59.738 52.381 0.00 0.00 33.56 3.32
839 851 1.138069 TCCGTGAGCTGAAGAACACAA 59.862 47.619 0.00 0.00 33.56 3.33
840 852 0.750249 TCCGTGAGCTGAAGAACACA 59.250 50.000 0.00 0.00 33.56 3.72
841 853 1.728971 CATCCGTGAGCTGAAGAACAC 59.271 52.381 0.00 0.00 0.00 3.32
842 854 1.338105 CCATCCGTGAGCTGAAGAACA 60.338 52.381 0.00 0.00 0.00 3.18
843 855 1.363744 CCATCCGTGAGCTGAAGAAC 58.636 55.000 0.00 0.00 0.00 3.01
844 856 0.250234 CCCATCCGTGAGCTGAAGAA 59.750 55.000 0.00 0.00 0.00 2.52
845 857 0.614697 TCCCATCCGTGAGCTGAAGA 60.615 55.000 0.00 0.00 0.00 2.87
846 858 0.179089 CTCCCATCCGTGAGCTGAAG 60.179 60.000 0.00 0.00 0.00 3.02
847 859 1.617018 CCTCCCATCCGTGAGCTGAA 61.617 60.000 0.00 0.00 0.00 3.02
848 860 2.060383 CCTCCCATCCGTGAGCTGA 61.060 63.158 0.00 0.00 0.00 4.26
849 861 2.503061 CCTCCCATCCGTGAGCTG 59.497 66.667 0.00 0.00 0.00 4.24
850 862 3.474570 GCCTCCCATCCGTGAGCT 61.475 66.667 0.00 0.00 0.00 4.09
851 863 4.899239 CGCCTCCCATCCGTGAGC 62.899 72.222 0.00 0.00 0.00 4.26
852 864 3.461773 ACGCCTCCCATCCGTGAG 61.462 66.667 0.00 0.00 33.46 3.51
868 880 4.416738 GCCCTCTGTCAGCCCCAC 62.417 72.222 0.00 0.00 0.00 4.61
898 910 2.047274 CCGTCAGACGCCCAATGT 60.047 61.111 18.02 0.00 40.91 2.71
900 912 3.319198 ACCCGTCAGACGCCCAAT 61.319 61.111 18.02 0.00 40.91 3.16
906 918 4.065281 GGACCCACCCGTCAGACG 62.065 72.222 16.50 16.50 42.11 4.18
909 921 3.760035 CGAGGACCCACCCGTCAG 61.760 72.222 0.00 0.00 40.05 3.51
914 926 0.179702 GTTTATCCGAGGACCCACCC 59.820 60.000 0.00 0.00 40.05 4.61
921 933 0.252789 TGGGTGGGTTTATCCGAGGA 60.253 55.000 0.00 0.00 37.00 3.71
924 936 0.841289 GGATGGGTGGGTTTATCCGA 59.159 55.000 0.00 0.00 37.00 4.55
937 949 0.862554 ATTGAGGGATTGGGGATGGG 59.137 55.000 0.00 0.00 0.00 4.00
940 952 1.505098 GGGAATTGAGGGATTGGGGAT 59.495 52.381 0.00 0.00 0.00 3.85
947 959 0.702706 GGGGAGGGGAATTGAGGGAT 60.703 60.000 0.00 0.00 0.00 3.85
948 960 1.308746 GGGGAGGGGAATTGAGGGA 60.309 63.158 0.00 0.00 0.00 4.20
949 961 2.395353 GGGGGAGGGGAATTGAGGG 61.395 68.421 0.00 0.00 0.00 4.30
952 964 1.005556 ATCGGGGGAGGGGAATTGA 59.994 57.895 0.00 0.00 0.00 2.57
953 965 1.456287 GATCGGGGGAGGGGAATTG 59.544 63.158 0.00 0.00 0.00 2.32
955 967 2.121918 GGATCGGGGGAGGGGAAT 60.122 66.667 0.00 0.00 0.00 3.01
961 973 4.815973 TGGTGGGGATCGGGGGAG 62.816 72.222 0.00 0.00 0.00 4.30
985 997 1.071471 CCATAACCCTAGCCGCTGG 59.929 63.158 2.16 0.00 0.00 4.85
986 998 0.034059 CTCCATAACCCTAGCCGCTG 59.966 60.000 2.16 0.00 0.00 5.18
987 999 0.105658 TCTCCATAACCCTAGCCGCT 60.106 55.000 0.00 0.00 0.00 5.52
988 1000 0.977395 ATCTCCATAACCCTAGCCGC 59.023 55.000 0.00 0.00 0.00 6.53
1205 1636 4.120755 GGAGGCTTGGCTCAGGGG 62.121 72.222 22.47 0.00 0.00 4.79
1281 1712 0.033208 CCATGTACCAAGGCACCCAT 60.033 55.000 0.00 0.00 0.00 4.00
1290 1721 4.434354 GCGGGGGCCATGTACCAA 62.434 66.667 4.39 0.00 0.00 3.67
1315 1746 2.203209 GGGCGGATGGGTCATGTC 60.203 66.667 0.00 0.00 0.00 3.06
1415 1846 2.137528 GTAGAGGGCAGGAGGAGGC 61.138 68.421 0.00 0.00 0.00 4.70
1420 1851 3.905678 CGCGGTAGAGGGCAGGAG 61.906 72.222 0.00 0.00 0.00 3.69
1438 1881 1.936767 TATTTGCAGGGCTCAGGGGG 61.937 60.000 0.00 0.00 0.00 5.40
1443 1886 2.355716 GGTGTAGTATTTGCAGGGCTCA 60.356 50.000 0.00 0.00 0.00 4.26
1463 1906 1.875963 GTGAAACTCACCATGCCGG 59.124 57.895 0.00 0.00 41.37 6.13
1476 1919 5.569355 TCAGAAATTAGATGGCAGGTGAAA 58.431 37.500 0.00 0.00 0.00 2.69
1482 1925 3.242870 GCGGTTCAGAAATTAGATGGCAG 60.243 47.826 0.00 0.00 0.00 4.85
1483 1926 2.682856 GCGGTTCAGAAATTAGATGGCA 59.317 45.455 0.00 0.00 0.00 4.92
1484 1927 2.945668 AGCGGTTCAGAAATTAGATGGC 59.054 45.455 0.00 0.00 0.00 4.40
1485 1928 4.191544 TCAGCGGTTCAGAAATTAGATGG 58.808 43.478 0.00 0.00 0.00 3.51
1487 1930 6.599244 TCAAATCAGCGGTTCAGAAATTAGAT 59.401 34.615 0.00 0.00 0.00 1.98
1488 1931 5.937540 TCAAATCAGCGGTTCAGAAATTAGA 59.062 36.000 0.00 0.00 0.00 2.10
1491 1934 5.416952 AGATCAAATCAGCGGTTCAGAAATT 59.583 36.000 0.00 0.00 0.00 1.82
1493 1936 4.154737 CAGATCAAATCAGCGGTTCAGAAA 59.845 41.667 0.00 0.00 0.00 2.52
1494 1937 3.686241 CAGATCAAATCAGCGGTTCAGAA 59.314 43.478 0.00 0.00 0.00 3.02
1496 1939 3.005554 ACAGATCAAATCAGCGGTTCAG 58.994 45.455 0.00 0.00 0.00 3.02
1497 1940 3.057969 ACAGATCAAATCAGCGGTTCA 57.942 42.857 0.00 0.00 0.00 3.18
1498 1941 3.686726 AGAACAGATCAAATCAGCGGTTC 59.313 43.478 0.00 0.00 0.00 3.62
1499 1942 3.679389 AGAACAGATCAAATCAGCGGTT 58.321 40.909 0.00 0.00 0.00 4.44
1501 1944 4.319333 GCATAGAACAGATCAAATCAGCGG 60.319 45.833 0.00 0.00 0.00 5.52
1503 1946 5.746307 TGCATAGAACAGATCAAATCAGC 57.254 39.130 0.00 0.00 0.00 4.26
1504 1947 6.493116 GGTTGCATAGAACAGATCAAATCAG 58.507 40.000 0.00 0.00 0.00 2.90
1505 1948 5.065090 CGGTTGCATAGAACAGATCAAATCA 59.935 40.000 0.00 0.00 0.00 2.57
1506 1949 5.505286 CGGTTGCATAGAACAGATCAAATC 58.495 41.667 0.00 0.00 0.00 2.17
1507 1950 4.201950 GCGGTTGCATAGAACAGATCAAAT 60.202 41.667 0.00 0.00 42.15 2.32
1509 1952 2.677836 GCGGTTGCATAGAACAGATCAA 59.322 45.455 0.00 0.00 42.15 2.57
1514 1961 4.882671 AATTAGCGGTTGCATAGAACAG 57.117 40.909 0.00 0.00 46.23 3.16
1520 1967 8.165239 AGATCAAATTAATTAGCGGTTGCATA 57.835 30.769 0.01 0.00 46.23 3.14
1521 1968 7.013655 AGAGATCAAATTAATTAGCGGTTGCAT 59.986 33.333 0.01 0.00 46.23 3.96
1529 1976 8.400947 TGCACAGAAGAGATCAAATTAATTAGC 58.599 33.333 0.01 0.00 0.00 3.09
1530 1977 9.932699 CTGCACAGAAGAGATCAAATTAATTAG 57.067 33.333 0.01 0.00 0.00 1.73
1534 1981 5.942236 AGCTGCACAGAAGAGATCAAATTAA 59.058 36.000 1.02 0.00 0.00 1.40
1535 1982 5.494724 AGCTGCACAGAAGAGATCAAATTA 58.505 37.500 1.02 0.00 0.00 1.40
1536 1983 4.333690 AGCTGCACAGAAGAGATCAAATT 58.666 39.130 1.02 0.00 0.00 1.82
1537 1984 3.940221 GAGCTGCACAGAAGAGATCAAAT 59.060 43.478 1.02 0.00 0.00 2.32
1538 1985 3.007723 AGAGCTGCACAGAAGAGATCAAA 59.992 43.478 1.02 0.00 0.00 2.69
1562 2009 2.005960 GAGCATAGACACGCGGACCT 62.006 60.000 12.47 6.34 0.00 3.85
1568 2015 1.124462 GATCACGAGCATAGACACGC 58.876 55.000 0.00 0.00 0.00 5.34
1574 2021 2.159430 CGGAGAGAGATCACGAGCATAG 59.841 54.545 0.00 0.00 0.00 2.23
1584 2031 3.206211 CTGCGGGCGGAGAGAGATC 62.206 68.421 0.00 0.00 35.50 2.75
1585 2032 3.222855 CTGCGGGCGGAGAGAGAT 61.223 66.667 0.00 0.00 35.50 2.75
1613 2060 3.251043 GCTGCTGTAGCGACGCTC 61.251 66.667 28.21 17.88 43.63 5.03
1646 2093 4.078516 ACGGGGTTAGCTGTCGGC 62.079 66.667 0.00 0.00 42.19 5.54
1647 2094 2.125673 CACGGGGTTAGCTGTCGG 60.126 66.667 0.00 0.00 0.00 4.79
1648 2095 1.153823 CTCACGGGGTTAGCTGTCG 60.154 63.158 0.00 0.00 0.00 4.35
1649 2096 1.134560 CTACTCACGGGGTTAGCTGTC 59.865 57.143 0.00 0.00 0.00 3.51
1661 2108 0.176680 ATGGAAGGCAGCTACTCACG 59.823 55.000 0.00 0.00 0.00 4.35
1669 2116 3.484407 AGATCAATACATGGAAGGCAGC 58.516 45.455 0.00 0.00 0.00 5.25
1683 2130 9.499479 GACACCAAAGATATGTATGAGATCAAT 57.501 33.333 0.00 0.00 0.00 2.57
1705 2410 5.220854 CGATACATTTTGATCTTGGGGACAC 60.221 44.000 0.00 0.00 42.67 3.67
1718 2423 4.512944 AGGCAGCTCATACGATACATTTTG 59.487 41.667 0.00 0.00 0.00 2.44
1724 2429 5.122512 TCTTAAGGCAGCTCATACGATAC 57.877 43.478 1.85 0.00 0.00 2.24
1736 2441 3.881688 CCCAACTGATGATCTTAAGGCAG 59.118 47.826 1.85 5.81 0.00 4.85
1776 2481 0.744874 GCCACTACCGAGCACTCATA 59.255 55.000 0.00 0.00 0.00 2.15
1780 2485 1.004918 GTTGCCACTACCGAGCACT 60.005 57.895 0.00 0.00 35.96 4.40
1788 2493 0.320697 AACGGGAGAGTTGCCACTAC 59.679 55.000 0.00 0.00 33.71 2.73
1790 2495 1.071471 CAACGGGAGAGTTGCCACT 59.929 57.895 0.00 0.00 43.87 4.00
1804 2509 1.647545 ATCATTGTCGCCCAGCAACG 61.648 55.000 0.00 0.00 0.00 4.10
1813 2519 3.688272 CAATGGAAGTGATCATTGTCGC 58.312 45.455 0.00 0.00 42.90 5.19
1849 2555 6.604795 AGGAATTCCATCTTAAGGTGATGTTG 59.395 38.462 26.22 0.00 39.54 3.33
1850 2556 6.735556 AGGAATTCCATCTTAAGGTGATGTT 58.264 36.000 26.22 8.03 39.54 2.71
1866 2572 4.021104 CACCTTCCCAAAGAAAGGAATTCC 60.021 45.833 17.31 17.31 41.26 3.01
1881 2587 4.066139 AGGCCATGGCACCTTCCC 62.066 66.667 36.56 18.19 44.11 3.97
1909 2615 6.480763 TCCAGTATTAATGTTTCCTTGCTCA 58.519 36.000 0.00 0.00 0.00 4.26
1912 2618 8.303876 TCTTTTCCAGTATTAATGTTTCCTTGC 58.696 33.333 0.00 0.00 0.00 4.01
2019 2725 4.835927 CCAGGATAGTGCGTGGTC 57.164 61.111 0.00 0.00 38.63 4.02
2024 2730 0.319040 CCATCGACCAGGATAGTGCG 60.319 60.000 0.00 0.00 0.00 5.34
2025 2731 0.753262 ACCATCGACCAGGATAGTGC 59.247 55.000 7.33 0.00 0.00 4.40
2049 2755 3.620488 GTGCCAGGTGGAATAATGAGAA 58.380 45.455 0.00 0.00 37.39 2.87
2053 2759 2.026641 CAGGTGCCAGGTGGAATAATG 58.973 52.381 0.00 0.00 37.39 1.90
2135 2841 9.308000 TGATTACAATGAGGTCCAAGTAAAAAT 57.692 29.630 0.00 0.00 34.92 1.82
2137 2843 8.698973 TTGATTACAATGAGGTCCAAGTAAAA 57.301 30.769 0.00 0.00 34.92 1.52
2138 2844 8.160765 TCTTGATTACAATGAGGTCCAAGTAAA 58.839 33.333 0.00 0.00 34.92 2.01
2139 2845 7.685481 TCTTGATTACAATGAGGTCCAAGTAA 58.315 34.615 0.00 0.00 35.37 2.24
2140 2846 7.252612 TCTTGATTACAATGAGGTCCAAGTA 57.747 36.000 0.00 0.00 35.37 2.24
2141 2847 6.126863 TCTTGATTACAATGAGGTCCAAGT 57.873 37.500 0.00 0.00 35.37 3.16
2142 2848 7.636150 AATCTTGATTACAATGAGGTCCAAG 57.364 36.000 0.00 0.00 35.37 3.61
2143 2849 8.421249 AAAATCTTGATTACAATGAGGTCCAA 57.579 30.769 0.00 0.00 35.37 3.53
2144 2850 9.699410 ATAAAATCTTGATTACAATGAGGTCCA 57.301 29.630 0.00 0.00 35.37 4.02
2147 2853 9.927081 AGGATAAAATCTTGATTACAATGAGGT 57.073 29.630 0.00 0.00 35.37 3.85
2168 2874 4.640771 AGCAAGGTTTCAAGACAGGATA 57.359 40.909 0.00 0.00 0.00 2.59
2169 2875 3.515602 AGCAAGGTTTCAAGACAGGAT 57.484 42.857 0.00 0.00 0.00 3.24
2170 2876 4.431416 TTAGCAAGGTTTCAAGACAGGA 57.569 40.909 0.00 0.00 0.00 3.86
2172 2878 5.067805 AGGTTTTAGCAAGGTTTCAAGACAG 59.932 40.000 0.00 0.00 0.00 3.51
2173 2879 4.953579 AGGTTTTAGCAAGGTTTCAAGACA 59.046 37.500 0.00 0.00 0.00 3.41
2174 2880 5.067283 TGAGGTTTTAGCAAGGTTTCAAGAC 59.933 40.000 0.00 0.00 0.00 3.01
2175 2881 5.197451 TGAGGTTTTAGCAAGGTTTCAAGA 58.803 37.500 0.00 0.00 0.00 3.02
2176 2882 5.514274 TGAGGTTTTAGCAAGGTTTCAAG 57.486 39.130 0.00 0.00 0.00 3.02
2204 2910 4.085733 CACCCATTTGAACTCCATGGTAA 58.914 43.478 12.58 0.00 36.47 2.85
2244 2950 2.117910 GTGACCGAGTTATTAGAGCGC 58.882 52.381 0.00 0.00 0.00 5.92
2277 2983 6.185511 ACTGTGAAATGGAATGATGACAGAT 58.814 36.000 0.00 0.00 33.83 2.90
2380 3086 8.543071 AATAAATAAGCGTAAGAAACAATCGC 57.457 30.769 0.00 0.00 45.82 4.58
2440 3146 5.327616 TCACATATTTGCAACCTTCCATG 57.672 39.130 0.00 0.00 0.00 3.66
2457 3163 4.879197 TCGCTCATCTCCATATTCACAT 57.121 40.909 0.00 0.00 0.00 3.21
2460 3166 5.244626 TCTTCATCGCTCATCTCCATATTCA 59.755 40.000 0.00 0.00 0.00 2.57
2461 3167 5.718146 TCTTCATCGCTCATCTCCATATTC 58.282 41.667 0.00 0.00 0.00 1.75
2465 3171 4.125703 GTTTCTTCATCGCTCATCTCCAT 58.874 43.478 0.00 0.00 0.00 3.41
2558 3264 5.057149 AGAGTGAACACAAACACATCCTAC 58.943 41.667 7.68 0.00 39.18 3.18
2559 3265 5.163353 TGAGAGTGAACACAAACACATCCTA 60.163 40.000 7.68 0.00 39.18 2.94
2565 3271 5.741388 ATCTTGAGAGTGAACACAAACAC 57.259 39.130 7.68 0.00 37.30 3.32
2574 3280 5.311265 AGCACATGAAATCTTGAGAGTGAA 58.689 37.500 0.00 0.00 0.00 3.18
2575 3281 4.903054 AGCACATGAAATCTTGAGAGTGA 58.097 39.130 0.00 0.00 0.00 3.41
2581 3287 5.518848 AACACAAGCACATGAAATCTTGA 57.481 34.783 19.46 0.00 39.22 3.02
2588 3294 3.554934 AGAGGAAACACAAGCACATGAA 58.445 40.909 0.00 0.00 0.00 2.57
2612 3321 1.551908 AACACCCGGCCCAACGTATA 61.552 55.000 0.00 0.00 0.00 1.47
2640 3349 9.057089 CATCTACTTAACTCTGGACAAAACTTT 57.943 33.333 0.00 0.00 0.00 2.66
2692 3401 6.704056 TTTCTAATCTCCCAGAGGAAACTT 57.296 37.500 0.00 0.00 43.40 2.66
2694 3403 4.878971 GCTTTCTAATCTCCCAGAGGAAAC 59.121 45.833 0.00 0.00 43.40 2.78
2696 3405 4.104086 TGCTTTCTAATCTCCCAGAGGAA 58.896 43.478 0.00 0.00 43.40 3.36
2697 3406 3.724478 TGCTTTCTAATCTCCCAGAGGA 58.276 45.455 0.00 0.00 41.08 3.71
2698 3407 4.141528 ACATGCTTTCTAATCTCCCAGAGG 60.142 45.833 0.00 0.00 0.00 3.69
2701 3410 5.033589 AGACATGCTTTCTAATCTCCCAG 57.966 43.478 0.00 0.00 0.00 4.45
2703 3412 6.529220 ACATAGACATGCTTTCTAATCTCCC 58.471 40.000 0.00 0.00 35.39 4.30
2708 3417 9.270640 GATGAGAACATAGACATGCTTTCTAAT 57.729 33.333 0.00 0.00 36.82 1.73
2764 3473 4.463539 TCATCCACATCAAATTTCCCACTG 59.536 41.667 0.00 0.00 0.00 3.66
2765 3474 4.676109 TCATCCACATCAAATTTCCCACT 58.324 39.130 0.00 0.00 0.00 4.00
2766 3475 4.706476 TCTCATCCACATCAAATTTCCCAC 59.294 41.667 0.00 0.00 0.00 4.61
2784 3493 8.084684 GGAAGCAACAGTAAAGATTTTTCTCAT 58.915 33.333 0.00 0.00 0.00 2.90
2798 3507 4.776349 TCAAAAGAGTGGAAGCAACAGTA 58.224 39.130 0.00 0.00 0.00 2.74
2802 3511 6.908870 AAAATTCAAAAGAGTGGAAGCAAC 57.091 33.333 0.00 0.00 0.00 4.17
2804 3513 9.691362 GTAATAAAATTCAAAAGAGTGGAAGCA 57.309 29.630 0.00 0.00 0.00 3.91
2861 3571 6.110707 GGAGGATGTGATCAAATTGCAAAAT 58.889 36.000 1.71 0.00 0.00 1.82
2877 3587 2.442272 CGGACGGAGGGAGGATGT 60.442 66.667 0.00 0.00 0.00 3.06
2881 3591 0.391263 CTTTTTCGGACGGAGGGAGG 60.391 60.000 0.00 0.00 0.00 4.30
2882 3592 0.320697 ACTTTTTCGGACGGAGGGAG 59.679 55.000 0.00 0.00 0.00 4.30
2883 3593 0.760572 AACTTTTTCGGACGGAGGGA 59.239 50.000 0.00 0.00 0.00 4.20
2884 3594 1.265905 CAAACTTTTTCGGACGGAGGG 59.734 52.381 0.00 0.00 0.00 4.30
2885 3595 1.944709 ACAAACTTTTTCGGACGGAGG 59.055 47.619 0.00 0.00 0.00 4.30
2886 3596 2.032290 GGACAAACTTTTTCGGACGGAG 60.032 50.000 0.00 0.00 0.00 4.63
2887 3597 1.941975 GGACAAACTTTTTCGGACGGA 59.058 47.619 0.00 0.00 0.00 4.69
2888 3598 1.002142 GGGACAAACTTTTTCGGACGG 60.002 52.381 0.00 0.00 0.00 4.79
2889 3599 1.944709 AGGGACAAACTTTTTCGGACG 59.055 47.619 0.00 0.00 0.00 4.79
2890 3600 2.946990 TGAGGGACAAACTTTTTCGGAC 59.053 45.455 0.00 0.00 0.00 4.79
2891 3601 3.284793 TGAGGGACAAACTTTTTCGGA 57.715 42.857 0.00 0.00 0.00 4.55
2892 3602 4.379339 TTTGAGGGACAAACTTTTTCGG 57.621 40.909 0.00 0.00 42.57 4.30
2901 3611 7.585982 ATGAGATACATCCATTTGAGGGACAAA 60.586 37.037 0.00 0.00 42.52 2.83
2902 3612 5.191522 TGAGATACATCCATTTGAGGGACAA 59.808 40.000 0.00 0.00 37.23 3.18
2903 3613 4.721274 TGAGATACATCCATTTGAGGGACA 59.279 41.667 0.00 0.00 37.23 4.02
2904 3614 5.296151 TGAGATACATCCATTTGAGGGAC 57.704 43.478 0.00 0.00 37.23 4.46
2905 3615 6.119240 GATGAGATACATCCATTTGAGGGA 57.881 41.667 0.00 0.00 46.78 4.20
2924 3634 3.726557 AGCTTGTCCCTCAAATGATGA 57.273 42.857 0.00 0.00 35.48 2.92
2925 3635 3.119245 CCAAGCTTGTCCCTCAAATGATG 60.119 47.826 24.35 0.65 35.48 3.07
2926 3636 3.094572 CCAAGCTTGTCCCTCAAATGAT 58.905 45.455 24.35 0.00 35.48 2.45
2927 3637 2.517959 CCAAGCTTGTCCCTCAAATGA 58.482 47.619 24.35 0.00 35.48 2.57
2928 3638 1.547372 CCCAAGCTTGTCCCTCAAATG 59.453 52.381 24.35 5.47 35.48 2.32
2929 3639 1.428912 TCCCAAGCTTGTCCCTCAAAT 59.571 47.619 24.35 0.00 35.48 2.32
2930 3640 0.850100 TCCCAAGCTTGTCCCTCAAA 59.150 50.000 24.35 0.00 35.48 2.69
2931 3641 0.110486 GTCCCAAGCTTGTCCCTCAA 59.890 55.000 24.35 0.00 34.61 3.02
2932 3642 1.059584 TGTCCCAAGCTTGTCCCTCA 61.060 55.000 24.35 12.85 0.00 3.86
2933 3643 0.110486 TTGTCCCAAGCTTGTCCCTC 59.890 55.000 24.35 10.65 0.00 4.30
2934 3644 0.111253 CTTGTCCCAAGCTTGTCCCT 59.889 55.000 24.35 0.00 0.00 4.20
2935 3645 1.527433 GCTTGTCCCAAGCTTGTCCC 61.527 60.000 24.35 11.81 40.01 4.46
2936 3646 1.959848 GCTTGTCCCAAGCTTGTCC 59.040 57.895 24.35 12.15 40.01 4.02
2956 3666 7.830201 ACCAATAATATGTACTCCGTCCAAAAA 59.170 33.333 0.00 0.00 0.00 1.94
2957 3667 7.340256 ACCAATAATATGTACTCCGTCCAAAA 58.660 34.615 0.00 0.00 0.00 2.44
2958 3668 6.891388 ACCAATAATATGTACTCCGTCCAAA 58.109 36.000 0.00 0.00 0.00 3.28
2959 3669 6.488769 ACCAATAATATGTACTCCGTCCAA 57.511 37.500 0.00 0.00 0.00 3.53
2960 3670 6.325545 AGAACCAATAATATGTACTCCGTCCA 59.674 38.462 0.00 0.00 0.00 4.02
2961 3671 6.756221 AGAACCAATAATATGTACTCCGTCC 58.244 40.000 0.00 0.00 0.00 4.79
2962 3672 7.595502 CAGAGAACCAATAATATGTACTCCGTC 59.404 40.741 0.00 0.00 0.00 4.79
2963 3673 7.434492 CAGAGAACCAATAATATGTACTCCGT 58.566 38.462 0.00 0.00 0.00 4.69
2964 3674 6.366332 GCAGAGAACCAATAATATGTACTCCG 59.634 42.308 0.00 0.00 0.00 4.63
2965 3675 7.171678 GTGCAGAGAACCAATAATATGTACTCC 59.828 40.741 0.00 0.00 0.00 3.85
2966 3676 7.096023 CGTGCAGAGAACCAATAATATGTACTC 60.096 40.741 0.00 0.00 0.00 2.59
2967 3677 6.701841 CGTGCAGAGAACCAATAATATGTACT 59.298 38.462 0.00 0.00 0.00 2.73
2968 3678 6.479001 ACGTGCAGAGAACCAATAATATGTAC 59.521 38.462 0.00 0.00 0.00 2.90
2969 3679 6.578944 ACGTGCAGAGAACCAATAATATGTA 58.421 36.000 0.00 0.00 0.00 2.29
2998 3708 9.869757 AAACATTAAAAAGGTATACCATTCAGC 57.130 29.630 23.87 0.00 38.89 4.26
3057 3769 0.621609 AAATTAGCGGGGGCTGTGTA 59.378 50.000 0.00 0.00 0.00 2.90
3099 3813 1.550130 GGTGGTCCAGTCGGATTGGA 61.550 60.000 17.29 17.29 45.33 3.53
3100 3814 1.078426 GGTGGTCCAGTCGGATTGG 60.078 63.158 12.97 12.97 45.33 3.16
3101 3815 1.078426 GGGTGGTCCAGTCGGATTG 60.078 63.158 0.00 0.00 45.33 2.67
3102 3816 0.042131 TAGGGTGGTCCAGTCGGATT 59.958 55.000 0.00 0.00 45.33 3.01
3103 3817 0.397254 CTAGGGTGGTCCAGTCGGAT 60.397 60.000 0.00 0.00 45.33 4.18
3104 3818 1.000019 CTAGGGTGGTCCAGTCGGA 60.000 63.158 0.00 0.00 39.79 4.55
3105 3819 1.305046 ACTAGGGTGGTCCAGTCGG 60.305 63.158 0.00 0.00 38.24 4.79
3106 3820 0.611062 TGACTAGGGTGGTCCAGTCG 60.611 60.000 0.00 0.00 41.93 4.18
3107 3821 1.187087 CTGACTAGGGTGGTCCAGTC 58.813 60.000 0.00 0.00 40.70 3.51
3108 3822 0.252284 CCTGACTAGGGTGGTCCAGT 60.252 60.000 0.00 0.00 40.63 4.00
3109 3823 0.041238 TCCTGACTAGGGTGGTCCAG 59.959 60.000 0.00 0.00 44.70 3.86
3110 3824 0.490017 TTCCTGACTAGGGTGGTCCA 59.510 55.000 0.00 0.00 44.70 4.02
3111 3825 0.903236 GTTCCTGACTAGGGTGGTCC 59.097 60.000 0.00 0.00 44.70 4.46
3112 3826 0.903236 GGTTCCTGACTAGGGTGGTC 59.097 60.000 0.00 0.00 44.70 4.02
3113 3827 0.192566 TGGTTCCTGACTAGGGTGGT 59.807 55.000 0.00 0.00 44.70 4.16
3114 3828 1.279271 CTTGGTTCCTGACTAGGGTGG 59.721 57.143 0.00 0.00 44.70 4.61
3115 3829 1.279271 CCTTGGTTCCTGACTAGGGTG 59.721 57.143 0.00 0.00 44.70 4.61
3116 3830 1.151413 TCCTTGGTTCCTGACTAGGGT 59.849 52.381 0.00 0.00 44.70 4.34
3117 3831 1.952621 TCCTTGGTTCCTGACTAGGG 58.047 55.000 0.00 0.00 44.70 3.53
3118 3832 4.576330 AATTCCTTGGTTCCTGACTAGG 57.424 45.455 0.00 0.00 46.06 3.02
3119 3833 6.049955 TGTAATTCCTTGGTTCCTGACTAG 57.950 41.667 0.00 0.00 0.00 2.57
3120 3834 6.214615 TGATGTAATTCCTTGGTTCCTGACTA 59.785 38.462 0.00 0.00 0.00 2.59
3121 3835 4.993705 TGTAATTCCTTGGTTCCTGACT 57.006 40.909 0.00 0.00 0.00 3.41
3122 3836 5.253330 TGATGTAATTCCTTGGTTCCTGAC 58.747 41.667 0.00 0.00 0.00 3.51
3123 3837 5.512942 TGATGTAATTCCTTGGTTCCTGA 57.487 39.130 0.00 0.00 0.00 3.86
3124 3838 6.588719 TTTGATGTAATTCCTTGGTTCCTG 57.411 37.500 0.00 0.00 0.00 3.86
3125 3839 7.010160 TCTTTTGATGTAATTCCTTGGTTCCT 58.990 34.615 0.00 0.00 0.00 3.36
3126 3840 7.227049 TCTTTTGATGTAATTCCTTGGTTCC 57.773 36.000 0.00 0.00 0.00 3.62
3127 3841 6.808704 GCTCTTTTGATGTAATTCCTTGGTTC 59.191 38.462 0.00 0.00 0.00 3.62
3128 3842 6.295292 GGCTCTTTTGATGTAATTCCTTGGTT 60.295 38.462 0.00 0.00 0.00 3.67
3129 3843 5.185828 GGCTCTTTTGATGTAATTCCTTGGT 59.814 40.000 0.00 0.00 0.00 3.67
3130 3844 5.420104 AGGCTCTTTTGATGTAATTCCTTGG 59.580 40.000 0.00 0.00 0.00 3.61
3131 3845 6.376581 AGAGGCTCTTTTGATGTAATTCCTTG 59.623 38.462 12.24 0.00 0.00 3.61
3132 3846 6.488715 AGAGGCTCTTTTGATGTAATTCCTT 58.511 36.000 12.24 0.00 0.00 3.36
3133 3847 6.069731 AGAGAGGCTCTTTTGATGTAATTCCT 60.070 38.462 19.80 2.57 37.60 3.36
3134 3848 6.118852 AGAGAGGCTCTTTTGATGTAATTCC 58.881 40.000 19.80 0.00 37.60 3.01
3492 4206 9.965902 AGTGATCCAAACACTCTTATATTTCTT 57.034 29.630 0.00 0.00 43.84 2.52
3499 4213 9.877178 CTAAAGTAGTGATCCAAACACTCTTAT 57.123 33.333 0.00 0.00 45.58 1.73
3500 4214 8.867097 ACTAAAGTAGTGATCCAAACACTCTTA 58.133 33.333 0.00 0.00 45.58 2.10
3501 4215 7.736893 ACTAAAGTAGTGATCCAAACACTCTT 58.263 34.615 0.00 0.00 45.58 2.85
3502 4216 7.304497 ACTAAAGTAGTGATCCAAACACTCT 57.696 36.000 0.00 0.00 45.58 3.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.