Multiple sequence alignment - TraesCS5B01G382500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G382500 chr5B 100.000 2525 0 0 1 2525 560989534 560992058 0.000000e+00 4663.0
1 TraesCS5B01G382500 chr5B 89.512 410 40 3 1 409 629009771 629010178 1.340000e-142 516.0
2 TraesCS5B01G382500 chr5B 89.268 410 41 3 1 409 625386250 625386657 6.230000e-141 510.0
3 TraesCS5B01G382500 chr5B 88.537 410 44 3 1 409 632905359 632904952 6.270000e-136 494.0
4 TraesCS5B01G382500 chr6B 91.153 2046 176 5 482 2525 697839868 697841910 0.000000e+00 2771.0
5 TraesCS5B01G382500 chr6B 90.812 468 43 0 1 468 603287336 603287803 5.930000e-176 627.0
6 TraesCS5B01G382500 chr6B 88.372 344 38 2 1 342 201194062 201193719 1.810000e-111 412.0
7 TraesCS5B01G382500 chr2D 84.600 2052 280 22 485 2525 474499685 474497659 0.000000e+00 2006.0
8 TraesCS5B01G382500 chrUn 94.763 611 31 1 1915 2525 88443948 88443339 0.000000e+00 950.0
9 TraesCS5B01G382500 chrUn 94.599 611 32 1 1915 2525 88485257 88484648 0.000000e+00 944.0
10 TraesCS5B01G382500 chrUn 94.421 466 25 1 1915 2380 359044804 359045268 0.000000e+00 715.0
11 TraesCS5B01G382500 chrUn 96.528 144 5 0 2382 2525 468339400 468339543 3.250000e-59 239.0
12 TraesCS5B01G382500 chr7B 92.735 468 34 0 1 468 364320529 364320996 0.000000e+00 676.0
13 TraesCS5B01G382500 chr7B 87.500 352 38 5 1 348 588156083 588155734 3.910000e-108 401.0
14 TraesCS5B01G382500 chr1B 91.507 471 33 6 1 468 114234558 114235024 2.120000e-180 641.0
15 TraesCS5B01G382500 chr1B 87.755 49 2 4 2264 2310 558571583 558571537 1.000000e-03 54.7
16 TraesCS5B01G382500 chr5D 90.244 410 37 3 1 409 501654036 501654443 1.330000e-147 532.0
17 TraesCS5B01G382500 chr4A 76.052 309 72 2 2217 2524 680313521 680313828 2.600000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G382500 chr5B 560989534 560992058 2524 False 4663 4663 100.000 1 2525 1 chr5B.!!$F1 2524
1 TraesCS5B01G382500 chr6B 697839868 697841910 2042 False 2771 2771 91.153 482 2525 1 chr6B.!!$F2 2043
2 TraesCS5B01G382500 chr2D 474497659 474499685 2026 True 2006 2006 84.600 485 2525 1 chr2D.!!$R1 2040
3 TraesCS5B01G382500 chrUn 88443339 88443948 609 True 950 950 94.763 1915 2525 1 chrUn.!!$R1 610
4 TraesCS5B01G382500 chrUn 88484648 88485257 609 True 944 944 94.599 1915 2525 1 chrUn.!!$R2 610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
91 92 0.035056 CTTGATTCCGCTCAACCCCT 60.035 55.0 0.0 0.0 31.98 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1757 1779 0.032813 CAACTTGCATGGGATCCCCT 60.033 55.0 28.58 16.34 45.7 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 7.377766 CATATAGGGTTTTTACCGGATGATG 57.622 40.000 9.46 0.00 0.00 3.07
25 26 3.732048 AGGGTTTTTACCGGATGATGT 57.268 42.857 9.46 0.00 0.00 3.06
26 27 4.042271 AGGGTTTTTACCGGATGATGTT 57.958 40.909 9.46 0.00 0.00 2.71
27 28 4.412843 AGGGTTTTTACCGGATGATGTTT 58.587 39.130 9.46 0.00 0.00 2.83
28 29 4.461431 AGGGTTTTTACCGGATGATGTTTC 59.539 41.667 9.46 0.00 0.00 2.78
29 30 4.381185 GGGTTTTTACCGGATGATGTTTCC 60.381 45.833 9.46 0.00 0.00 3.13
30 31 4.381185 GGTTTTTACCGGATGATGTTTCCC 60.381 45.833 9.46 0.00 0.00 3.97
31 32 3.722908 TTTACCGGATGATGTTTCCCA 57.277 42.857 9.46 0.00 0.00 4.37
32 33 3.275617 TTACCGGATGATGTTTCCCAG 57.724 47.619 9.46 0.00 0.00 4.45
33 34 0.255890 ACCGGATGATGTTTCCCAGG 59.744 55.000 9.46 0.00 0.00 4.45
34 35 0.466189 CCGGATGATGTTTCCCAGGG 60.466 60.000 0.00 0.00 0.00 4.45
35 36 1.103398 CGGATGATGTTTCCCAGGGC 61.103 60.000 0.00 0.00 0.00 5.19
36 37 0.756815 GGATGATGTTTCCCAGGGCC 60.757 60.000 0.00 0.00 0.00 5.80
37 38 0.756815 GATGATGTTTCCCAGGGCCC 60.757 60.000 16.46 16.46 0.00 5.80
38 39 2.440247 GATGTTTCCCAGGGCCCG 60.440 66.667 18.44 11.67 0.00 6.13
39 40 2.938798 ATGTTTCCCAGGGCCCGA 60.939 61.111 18.44 4.61 0.00 5.14
40 41 2.493273 GATGTTTCCCAGGGCCCGAA 62.493 60.000 18.44 11.68 0.00 4.30
41 42 2.361230 GTTTCCCAGGGCCCGAAG 60.361 66.667 18.44 10.78 0.00 3.79
42 43 4.360405 TTTCCCAGGGCCCGAAGC 62.360 66.667 18.44 0.00 42.60 3.86
46 47 4.785453 CCAGGGCCCGAAGCTGTC 62.785 72.222 18.44 0.00 43.05 3.51
47 48 3.710722 CAGGGCCCGAAGCTGTCT 61.711 66.667 18.44 0.00 43.05 3.41
48 49 2.038975 AGGGCCCGAAGCTGTCTA 59.961 61.111 18.44 0.00 43.05 2.59
49 50 1.612442 AGGGCCCGAAGCTGTCTAA 60.612 57.895 18.44 0.00 43.05 2.10
50 51 1.198759 AGGGCCCGAAGCTGTCTAAA 61.199 55.000 18.44 0.00 43.05 1.85
51 52 1.025113 GGGCCCGAAGCTGTCTAAAC 61.025 60.000 5.69 0.00 43.05 2.01
52 53 0.036294 GGCCCGAAGCTGTCTAAACT 60.036 55.000 0.00 0.00 43.05 2.66
53 54 1.360820 GCCCGAAGCTGTCTAAACTC 58.639 55.000 0.00 0.00 38.99 3.01
54 55 2.007547 GCCCGAAGCTGTCTAAACTCC 61.008 57.143 0.00 0.00 38.99 3.85
55 56 1.405661 CCCGAAGCTGTCTAAACTCCC 60.406 57.143 0.00 0.00 0.00 4.30
56 57 1.630148 CGAAGCTGTCTAAACTCCCG 58.370 55.000 0.00 0.00 0.00 5.14
57 58 1.067776 CGAAGCTGTCTAAACTCCCGT 60.068 52.381 0.00 0.00 0.00 5.28
58 59 2.608268 GAAGCTGTCTAAACTCCCGTC 58.392 52.381 0.00 0.00 0.00 4.79
59 60 1.926108 AGCTGTCTAAACTCCCGTCT 58.074 50.000 0.00 0.00 0.00 4.18
60 61 2.249139 AGCTGTCTAAACTCCCGTCTT 58.751 47.619 0.00 0.00 0.00 3.01
61 62 2.028930 AGCTGTCTAAACTCCCGTCTTG 60.029 50.000 0.00 0.00 0.00 3.02
62 63 2.288886 GCTGTCTAAACTCCCGTCTTGT 60.289 50.000 0.00 0.00 0.00 3.16
63 64 3.318017 CTGTCTAAACTCCCGTCTTGTG 58.682 50.000 0.00 0.00 0.00 3.33
64 65 2.036733 TGTCTAAACTCCCGTCTTGTGG 59.963 50.000 0.00 0.00 0.00 4.17
65 66 2.036862 GTCTAAACTCCCGTCTTGTGGT 59.963 50.000 0.00 0.00 0.00 4.16
66 67 2.036733 TCTAAACTCCCGTCTTGTGGTG 59.963 50.000 0.00 0.00 0.00 4.17
67 68 0.544697 AAACTCCCGTCTTGTGGTGT 59.455 50.000 0.00 0.00 0.00 4.16
68 69 0.179056 AACTCCCGTCTTGTGGTGTG 60.179 55.000 0.00 0.00 0.00 3.82
69 70 1.335132 ACTCCCGTCTTGTGGTGTGT 61.335 55.000 0.00 0.00 0.00 3.72
70 71 0.600255 CTCCCGTCTTGTGGTGTGTC 60.600 60.000 0.00 0.00 0.00 3.67
71 72 1.046472 TCCCGTCTTGTGGTGTGTCT 61.046 55.000 0.00 0.00 0.00 3.41
72 73 0.600255 CCCGTCTTGTGGTGTGTCTC 60.600 60.000 0.00 0.00 0.00 3.36
73 74 0.389391 CCGTCTTGTGGTGTGTCTCT 59.611 55.000 0.00 0.00 0.00 3.10
74 75 1.202533 CCGTCTTGTGGTGTGTCTCTT 60.203 52.381 0.00 0.00 0.00 2.85
75 76 1.860950 CGTCTTGTGGTGTGTCTCTTG 59.139 52.381 0.00 0.00 0.00 3.02
76 77 2.481276 CGTCTTGTGGTGTGTCTCTTGA 60.481 50.000 0.00 0.00 0.00 3.02
77 78 3.733337 GTCTTGTGGTGTGTCTCTTGAT 58.267 45.455 0.00 0.00 0.00 2.57
78 79 4.130118 GTCTTGTGGTGTGTCTCTTGATT 58.870 43.478 0.00 0.00 0.00 2.57
79 80 4.212214 GTCTTGTGGTGTGTCTCTTGATTC 59.788 45.833 0.00 0.00 0.00 2.52
80 81 3.126001 TGTGGTGTGTCTCTTGATTCC 57.874 47.619 0.00 0.00 0.00 3.01
81 82 2.069273 GTGGTGTGTCTCTTGATTCCG 58.931 52.381 0.00 0.00 0.00 4.30
82 83 1.079503 GGTGTGTCTCTTGATTCCGC 58.920 55.000 0.00 0.00 0.00 5.54
83 84 1.338200 GGTGTGTCTCTTGATTCCGCT 60.338 52.381 0.00 0.00 0.00 5.52
84 85 1.996191 GTGTGTCTCTTGATTCCGCTC 59.004 52.381 0.00 0.00 0.00 5.03
85 86 1.618343 TGTGTCTCTTGATTCCGCTCA 59.382 47.619 0.00 0.00 0.00 4.26
86 87 2.037121 TGTGTCTCTTGATTCCGCTCAA 59.963 45.455 0.00 0.00 34.14 3.02
87 88 2.413453 GTGTCTCTTGATTCCGCTCAAC 59.587 50.000 0.00 0.00 31.98 3.18
88 89 2.003301 GTCTCTTGATTCCGCTCAACC 58.997 52.381 0.00 0.00 31.98 3.77
89 90 1.066143 TCTCTTGATTCCGCTCAACCC 60.066 52.381 0.00 0.00 31.98 4.11
90 91 0.035439 TCTTGATTCCGCTCAACCCC 60.035 55.000 0.00 0.00 31.98 4.95
91 92 0.035056 CTTGATTCCGCTCAACCCCT 60.035 55.000 0.00 0.00 31.98 4.79
92 93 0.035439 TTGATTCCGCTCAACCCCTC 60.035 55.000 0.00 0.00 30.34 4.30
93 94 0.909610 TGATTCCGCTCAACCCCTCT 60.910 55.000 0.00 0.00 0.00 3.69
94 95 0.179070 GATTCCGCTCAACCCCTCTC 60.179 60.000 0.00 0.00 0.00 3.20
95 96 0.909610 ATTCCGCTCAACCCCTCTCA 60.910 55.000 0.00 0.00 0.00 3.27
96 97 1.544825 TTCCGCTCAACCCCTCTCAG 61.545 60.000 0.00 0.00 0.00 3.35
97 98 2.581354 CGCTCAACCCCTCTCAGG 59.419 66.667 0.00 0.00 34.30 3.86
98 99 2.270527 GCTCAACCCCTCTCAGGC 59.729 66.667 0.00 0.00 32.73 4.85
99 100 2.297129 GCTCAACCCCTCTCAGGCT 61.297 63.158 0.00 0.00 32.73 4.58
100 101 0.978146 GCTCAACCCCTCTCAGGCTA 60.978 60.000 0.00 0.00 32.73 3.93
101 102 0.827368 CTCAACCCCTCTCAGGCTAC 59.173 60.000 0.00 0.00 32.73 3.58
102 103 0.617820 TCAACCCCTCTCAGGCTACC 60.618 60.000 0.00 0.00 32.73 3.18
103 104 0.909610 CAACCCCTCTCAGGCTACCA 60.910 60.000 0.00 0.00 32.73 3.25
104 105 0.910088 AACCCCTCTCAGGCTACCAC 60.910 60.000 0.00 0.00 32.73 4.16
105 106 1.306141 CCCCTCTCAGGCTACCACA 60.306 63.158 0.00 0.00 32.73 4.17
106 107 0.692419 CCCCTCTCAGGCTACCACAT 60.692 60.000 0.00 0.00 32.73 3.21
107 108 1.413082 CCCCTCTCAGGCTACCACATA 60.413 57.143 0.00 0.00 32.73 2.29
108 109 1.967066 CCCTCTCAGGCTACCACATAG 59.033 57.143 0.00 0.00 32.73 2.23
109 110 2.424957 CCCTCTCAGGCTACCACATAGA 60.425 54.545 0.00 0.00 32.73 1.98
110 111 3.505386 CCTCTCAGGCTACCACATAGAT 58.495 50.000 0.00 0.00 31.83 1.98
111 112 3.257873 CCTCTCAGGCTACCACATAGATG 59.742 52.174 0.00 0.00 31.83 2.90
112 113 2.630098 TCTCAGGCTACCACATAGATGC 59.370 50.000 0.00 0.00 31.83 3.91
113 114 1.341209 TCAGGCTACCACATAGATGCG 59.659 52.381 0.00 0.00 31.83 4.73
114 115 1.069204 CAGGCTACCACATAGATGCGT 59.931 52.381 0.00 0.00 31.83 5.24
115 116 1.762957 AGGCTACCACATAGATGCGTT 59.237 47.619 0.00 0.00 31.83 4.84
116 117 1.867233 GGCTACCACATAGATGCGTTG 59.133 52.381 0.00 0.00 31.83 4.10
117 118 1.867233 GCTACCACATAGATGCGTTGG 59.133 52.381 0.00 0.00 31.83 3.77
118 119 1.867233 CTACCACATAGATGCGTTGGC 59.133 52.381 0.00 0.00 34.37 4.52
119 120 0.748005 ACCACATAGATGCGTTGGCC 60.748 55.000 0.00 0.00 38.85 5.36
120 121 0.464373 CCACATAGATGCGTTGGCCT 60.464 55.000 3.32 0.00 38.85 5.19
121 122 0.940126 CACATAGATGCGTTGGCCTC 59.060 55.000 3.32 0.00 38.85 4.70
122 123 0.530650 ACATAGATGCGTTGGCCTCG 60.531 55.000 3.32 10.54 38.64 4.63
130 131 3.479269 GTTGGCCTCGCGACGAAG 61.479 66.667 3.71 0.00 34.74 3.79
154 155 2.654749 TGCACTAAGGACATCTGACG 57.345 50.000 0.00 0.00 0.00 4.35
155 156 1.893137 TGCACTAAGGACATCTGACGT 59.107 47.619 0.00 0.00 0.00 4.34
156 157 2.263077 GCACTAAGGACATCTGACGTG 58.737 52.381 0.00 0.00 0.00 4.49
157 158 2.352814 GCACTAAGGACATCTGACGTGT 60.353 50.000 0.00 0.00 0.00 4.49
158 159 3.861131 GCACTAAGGACATCTGACGTGTT 60.861 47.826 0.00 0.00 0.00 3.32
159 160 4.617530 GCACTAAGGACATCTGACGTGTTA 60.618 45.833 0.00 0.00 0.00 2.41
160 161 5.466819 CACTAAGGACATCTGACGTGTTAA 58.533 41.667 0.00 0.00 0.00 2.01
161 162 6.100004 CACTAAGGACATCTGACGTGTTAAT 58.900 40.000 0.00 0.00 0.00 1.40
162 163 6.590292 CACTAAGGACATCTGACGTGTTAATT 59.410 38.462 0.00 0.00 0.00 1.40
163 164 6.812160 ACTAAGGACATCTGACGTGTTAATTC 59.188 38.462 0.00 0.00 0.00 2.17
164 165 4.504858 AGGACATCTGACGTGTTAATTCC 58.495 43.478 0.00 0.00 0.00 3.01
165 166 4.020573 AGGACATCTGACGTGTTAATTCCA 60.021 41.667 0.00 0.00 0.00 3.53
166 167 4.092968 GGACATCTGACGTGTTAATTCCAC 59.907 45.833 0.00 0.00 0.00 4.02
174 175 3.455619 GTGTTAATTCCACGACAGCTG 57.544 47.619 13.48 13.48 0.00 4.24
175 176 2.159627 GTGTTAATTCCACGACAGCTGG 59.840 50.000 19.93 3.21 0.00 4.85
176 177 1.130561 GTTAATTCCACGACAGCTGGC 59.869 52.381 19.93 15.62 0.00 4.85
208 209 4.444024 CCGCGCACGATGGTGTTG 62.444 66.667 8.75 4.04 46.13 3.33
209 210 3.410516 CGCGCACGATGGTGTTGA 61.411 61.111 8.75 0.00 46.13 3.18
210 211 2.476051 GCGCACGATGGTGTTGAG 59.524 61.111 9.74 0.88 46.13 3.02
211 212 2.317609 GCGCACGATGGTGTTGAGT 61.318 57.895 9.74 0.00 46.13 3.41
212 213 1.841663 GCGCACGATGGTGTTGAGTT 61.842 55.000 9.74 0.00 46.13 3.01
213 214 0.163788 CGCACGATGGTGTTGAGTTC 59.836 55.000 9.74 0.00 46.13 3.01
214 215 1.512926 GCACGATGGTGTTGAGTTCT 58.487 50.000 9.74 0.00 46.13 3.01
215 216 1.873591 GCACGATGGTGTTGAGTTCTT 59.126 47.619 9.74 0.00 46.13 2.52
216 217 2.349817 GCACGATGGTGTTGAGTTCTTG 60.350 50.000 9.74 0.00 46.13 3.02
217 218 2.224079 CACGATGGTGTTGAGTTCTTGG 59.776 50.000 0.00 0.00 39.38 3.61
218 219 2.104111 ACGATGGTGTTGAGTTCTTGGA 59.896 45.455 0.00 0.00 0.00 3.53
219 220 2.738846 CGATGGTGTTGAGTTCTTGGAG 59.261 50.000 0.00 0.00 0.00 3.86
220 221 2.638480 TGGTGTTGAGTTCTTGGAGG 57.362 50.000 0.00 0.00 0.00 4.30
221 222 1.142870 TGGTGTTGAGTTCTTGGAGGG 59.857 52.381 0.00 0.00 0.00 4.30
222 223 1.143073 GGTGTTGAGTTCTTGGAGGGT 59.857 52.381 0.00 0.00 0.00 4.34
223 224 2.422945 GGTGTTGAGTTCTTGGAGGGTT 60.423 50.000 0.00 0.00 0.00 4.11
224 225 2.879026 GTGTTGAGTTCTTGGAGGGTTC 59.121 50.000 0.00 0.00 0.00 3.62
225 226 2.158667 TGTTGAGTTCTTGGAGGGTTCC 60.159 50.000 0.00 0.00 44.31 3.62
226 227 1.064825 TGAGTTCTTGGAGGGTTCCC 58.935 55.000 0.00 0.00 43.33 3.97
227 228 0.328592 GAGTTCTTGGAGGGTTCCCC 59.671 60.000 4.02 0.00 45.90 4.81
236 237 3.735725 GGGTTCCCCAAGGATCGA 58.264 61.111 0.00 0.00 44.65 3.59
237 238 1.527370 GGGTTCCCCAAGGATCGAG 59.473 63.158 0.00 0.00 44.65 4.04
238 239 0.981277 GGGTTCCCCAAGGATCGAGA 60.981 60.000 0.00 0.00 44.65 4.04
239 240 0.466124 GGTTCCCCAAGGATCGAGAG 59.534 60.000 0.00 0.00 43.54 3.20
240 241 0.466124 GTTCCCCAAGGATCGAGAGG 59.534 60.000 0.00 0.00 43.54 3.69
241 242 1.338136 TTCCCCAAGGATCGAGAGGC 61.338 60.000 0.00 0.00 43.54 4.70
242 243 1.764054 CCCCAAGGATCGAGAGGCT 60.764 63.158 0.00 0.00 33.47 4.58
243 244 1.745264 CCCAAGGATCGAGAGGCTC 59.255 63.158 6.34 6.34 0.00 4.70
252 253 4.116878 GAGAGGCTCGTGATTGGC 57.883 61.111 9.22 0.00 0.00 4.52
253 254 1.522580 GAGAGGCTCGTGATTGGCC 60.523 63.158 9.22 0.00 45.57 5.36
256 257 4.467084 GGCTCGTGATTGGCCGGA 62.467 66.667 5.05 0.00 36.37 5.14
257 258 2.203070 GCTCGTGATTGGCCGGAT 60.203 61.111 5.05 0.00 0.00 4.18
258 259 2.537560 GCTCGTGATTGGCCGGATG 61.538 63.158 5.05 0.00 0.00 3.51
259 260 1.143838 CTCGTGATTGGCCGGATGA 59.856 57.895 5.05 0.00 0.00 2.92
260 261 0.461870 CTCGTGATTGGCCGGATGAA 60.462 55.000 5.05 0.00 0.00 2.57
261 262 0.461870 TCGTGATTGGCCGGATGAAG 60.462 55.000 5.05 0.00 0.00 3.02
262 263 0.461870 CGTGATTGGCCGGATGAAGA 60.462 55.000 5.05 0.00 0.00 2.87
263 264 1.750193 GTGATTGGCCGGATGAAGAA 58.250 50.000 5.05 0.00 0.00 2.52
264 265 1.672881 GTGATTGGCCGGATGAAGAAG 59.327 52.381 5.05 0.00 0.00 2.85
265 266 1.559219 TGATTGGCCGGATGAAGAAGA 59.441 47.619 5.05 0.00 0.00 2.87
266 267 2.026356 TGATTGGCCGGATGAAGAAGAA 60.026 45.455 5.05 0.00 0.00 2.52
267 268 1.821216 TTGGCCGGATGAAGAAGAAC 58.179 50.000 5.05 0.00 0.00 3.01
268 269 0.035439 TGGCCGGATGAAGAAGAACC 60.035 55.000 5.05 0.00 0.00 3.62
269 270 1.090052 GGCCGGATGAAGAAGAACCG 61.090 60.000 5.05 0.00 42.67 4.44
271 272 2.384203 CGGATGAAGAAGAACCGGC 58.616 57.895 0.00 0.00 39.92 6.13
272 273 0.391130 CGGATGAAGAAGAACCGGCA 60.391 55.000 0.00 0.00 39.92 5.69
273 274 1.087501 GGATGAAGAAGAACCGGCAC 58.912 55.000 0.00 0.00 0.00 5.01
287 288 3.525619 GGCACGAGACAACCATACA 57.474 52.632 0.00 0.00 0.00 2.29
288 289 1.076332 GGCACGAGACAACCATACAC 58.924 55.000 0.00 0.00 0.00 2.90
289 290 0.713883 GCACGAGACAACCATACACG 59.286 55.000 0.00 0.00 0.00 4.49
290 291 1.667756 GCACGAGACAACCATACACGA 60.668 52.381 0.00 0.00 0.00 4.35
291 292 2.876091 CACGAGACAACCATACACGAT 58.124 47.619 0.00 0.00 0.00 3.73
292 293 3.250744 CACGAGACAACCATACACGATT 58.749 45.455 0.00 0.00 0.00 3.34
293 294 3.678072 CACGAGACAACCATACACGATTT 59.322 43.478 0.00 0.00 0.00 2.17
294 295 4.860352 CACGAGACAACCATACACGATTTA 59.140 41.667 0.00 0.00 0.00 1.40
295 296 4.860907 ACGAGACAACCATACACGATTTAC 59.139 41.667 0.00 0.00 0.00 2.01
296 297 5.100259 CGAGACAACCATACACGATTTACT 58.900 41.667 0.00 0.00 0.00 2.24
297 298 5.575606 CGAGACAACCATACACGATTTACTT 59.424 40.000 0.00 0.00 0.00 2.24
298 299 6.090358 CGAGACAACCATACACGATTTACTTT 59.910 38.462 0.00 0.00 0.00 2.66
299 300 7.129109 AGACAACCATACACGATTTACTTTG 57.871 36.000 0.00 0.00 0.00 2.77
300 301 6.148811 AGACAACCATACACGATTTACTTTGG 59.851 38.462 0.00 0.00 0.00 3.28
301 302 5.998981 ACAACCATACACGATTTACTTTGGA 59.001 36.000 0.00 0.00 0.00 3.53
302 303 6.657541 ACAACCATACACGATTTACTTTGGAT 59.342 34.615 0.00 0.00 0.00 3.41
303 304 6.920569 ACCATACACGATTTACTTTGGATC 57.079 37.500 0.00 0.00 0.00 3.36
304 305 6.650120 ACCATACACGATTTACTTTGGATCT 58.350 36.000 0.00 0.00 0.00 2.75
305 306 6.538742 ACCATACACGATTTACTTTGGATCTG 59.461 38.462 0.00 0.00 0.00 2.90
306 307 6.017934 CCATACACGATTTACTTTGGATCTGG 60.018 42.308 0.00 0.00 0.00 3.86
307 308 4.261801 ACACGATTTACTTTGGATCTGGG 58.738 43.478 0.00 0.00 0.00 4.45
308 309 4.019681 ACACGATTTACTTTGGATCTGGGA 60.020 41.667 0.00 0.00 0.00 4.37
309 310 4.572389 CACGATTTACTTTGGATCTGGGAG 59.428 45.833 0.00 0.00 0.00 4.30
310 311 4.225267 ACGATTTACTTTGGATCTGGGAGT 59.775 41.667 0.00 0.00 0.00 3.85
311 312 5.424252 ACGATTTACTTTGGATCTGGGAGTA 59.576 40.000 0.00 0.00 0.00 2.59
312 313 5.753921 CGATTTACTTTGGATCTGGGAGTAC 59.246 44.000 0.00 0.00 0.00 2.73
313 314 6.629515 CGATTTACTTTGGATCTGGGAGTACA 60.630 42.308 0.00 0.00 0.00 2.90
314 315 6.442541 TTTACTTTGGATCTGGGAGTACAA 57.557 37.500 0.00 0.00 0.00 2.41
315 316 4.559862 ACTTTGGATCTGGGAGTACAAG 57.440 45.455 0.00 0.00 0.00 3.16
316 317 4.168101 ACTTTGGATCTGGGAGTACAAGA 58.832 43.478 0.00 0.00 0.00 3.02
317 318 4.223923 ACTTTGGATCTGGGAGTACAAGAG 59.776 45.833 0.00 0.00 0.00 2.85
318 319 3.474798 TGGATCTGGGAGTACAAGAGT 57.525 47.619 0.00 0.00 0.00 3.24
319 320 3.791320 TGGATCTGGGAGTACAAGAGTT 58.209 45.455 0.00 0.00 0.00 3.01
320 321 3.515502 TGGATCTGGGAGTACAAGAGTTG 59.484 47.826 0.00 0.00 0.00 3.16
321 322 3.769844 GGATCTGGGAGTACAAGAGTTGA 59.230 47.826 0.00 0.00 0.00 3.18
322 323 4.142049 GGATCTGGGAGTACAAGAGTTGAG 60.142 50.000 0.00 0.00 0.00 3.02
323 324 3.845860 TCTGGGAGTACAAGAGTTGAGT 58.154 45.455 0.00 0.00 0.00 3.41
324 325 4.223953 TCTGGGAGTACAAGAGTTGAGTT 58.776 43.478 0.00 0.00 0.00 3.01
325 326 4.039245 TCTGGGAGTACAAGAGTTGAGTTG 59.961 45.833 0.00 0.00 0.00 3.16
326 327 3.964688 TGGGAGTACAAGAGTTGAGTTGA 59.035 43.478 0.00 0.00 0.00 3.18
327 328 4.593206 TGGGAGTACAAGAGTTGAGTTGAT 59.407 41.667 0.00 0.00 0.00 2.57
328 329 4.932200 GGGAGTACAAGAGTTGAGTTGATG 59.068 45.833 0.00 0.00 0.00 3.07
329 330 5.279506 GGGAGTACAAGAGTTGAGTTGATGA 60.280 44.000 0.00 0.00 0.00 2.92
330 331 6.223852 GGAGTACAAGAGTTGAGTTGATGAA 58.776 40.000 0.00 0.00 0.00 2.57
331 332 6.706270 GGAGTACAAGAGTTGAGTTGATGAAA 59.294 38.462 0.00 0.00 0.00 2.69
332 333 7.226720 GGAGTACAAGAGTTGAGTTGATGAAAA 59.773 37.037 0.00 0.00 0.00 2.29
333 334 8.506168 AGTACAAGAGTTGAGTTGATGAAAAA 57.494 30.769 0.00 0.00 0.00 1.94
334 335 9.125026 AGTACAAGAGTTGAGTTGATGAAAAAT 57.875 29.630 0.00 0.00 0.00 1.82
335 336 9.736023 GTACAAGAGTTGAGTTGATGAAAAATT 57.264 29.630 0.00 0.00 0.00 1.82
337 338 9.956720 ACAAGAGTTGAGTTGATGAAAAATTAG 57.043 29.630 0.00 0.00 0.00 1.73
338 339 9.403110 CAAGAGTTGAGTTGATGAAAAATTAGG 57.597 33.333 0.00 0.00 0.00 2.69
339 340 8.115490 AGAGTTGAGTTGATGAAAAATTAGGG 57.885 34.615 0.00 0.00 0.00 3.53
340 341 7.725844 AGAGTTGAGTTGATGAAAAATTAGGGT 59.274 33.333 0.00 0.00 0.00 4.34
341 342 8.250143 AGTTGAGTTGATGAAAAATTAGGGTT 57.750 30.769 0.00 0.00 0.00 4.11
342 343 8.360390 AGTTGAGTTGATGAAAAATTAGGGTTC 58.640 33.333 0.00 0.00 0.00 3.62
343 344 7.227049 TGAGTTGATGAAAAATTAGGGTTCC 57.773 36.000 0.00 0.00 0.00 3.62
344 345 6.072175 TGAGTTGATGAAAAATTAGGGTTCCG 60.072 38.462 0.00 0.00 0.00 4.30
345 346 5.773176 AGTTGATGAAAAATTAGGGTTCCGT 59.227 36.000 0.00 0.00 0.00 4.69
346 347 6.266786 AGTTGATGAAAAATTAGGGTTCCGTT 59.733 34.615 0.00 0.00 0.00 4.44
347 348 6.658188 TGATGAAAAATTAGGGTTCCGTTT 57.342 33.333 0.00 0.00 0.00 3.60
348 349 7.762588 TGATGAAAAATTAGGGTTCCGTTTA 57.237 32.000 0.00 0.00 0.00 2.01
349 350 8.356000 TGATGAAAAATTAGGGTTCCGTTTAT 57.644 30.769 0.00 0.00 0.00 1.40
350 351 9.463902 TGATGAAAAATTAGGGTTCCGTTTATA 57.536 29.630 0.00 0.00 0.00 0.98
353 354 8.192110 TGAAAAATTAGGGTTCCGTTTATATGC 58.808 33.333 0.00 0.00 0.00 3.14
354 355 7.891498 AAAATTAGGGTTCCGTTTATATGCT 57.109 32.000 0.00 0.00 0.00 3.79
355 356 6.877611 AATTAGGGTTCCGTTTATATGCTG 57.122 37.500 0.00 0.00 0.00 4.41
356 357 2.572290 AGGGTTCCGTTTATATGCTGC 58.428 47.619 0.00 0.00 0.00 5.25
357 358 1.607148 GGGTTCCGTTTATATGCTGCC 59.393 52.381 0.00 0.00 0.00 4.85
358 359 1.263217 GGTTCCGTTTATATGCTGCCG 59.737 52.381 0.00 0.00 0.00 5.69
359 360 2.206750 GTTCCGTTTATATGCTGCCGA 58.793 47.619 0.00 0.00 0.00 5.54
360 361 1.860676 TCCGTTTATATGCTGCCGAC 58.139 50.000 0.00 0.00 0.00 4.79
361 362 1.137282 TCCGTTTATATGCTGCCGACA 59.863 47.619 0.00 0.00 0.00 4.35
362 363 2.143122 CCGTTTATATGCTGCCGACAT 58.857 47.619 0.00 0.00 0.00 3.06
363 364 2.548057 CCGTTTATATGCTGCCGACATT 59.452 45.455 0.00 0.00 0.00 2.71
364 365 3.003275 CCGTTTATATGCTGCCGACATTT 59.997 43.478 0.00 0.00 0.00 2.32
365 366 4.497340 CCGTTTATATGCTGCCGACATTTT 60.497 41.667 0.00 0.00 0.00 1.82
366 367 4.670621 CGTTTATATGCTGCCGACATTTTC 59.329 41.667 0.00 0.00 0.00 2.29
367 368 5.504010 CGTTTATATGCTGCCGACATTTTCT 60.504 40.000 0.00 0.00 0.00 2.52
368 369 3.976793 ATATGCTGCCGACATTTTCTG 57.023 42.857 0.00 0.00 0.00 3.02
369 370 0.171903 ATGCTGCCGACATTTTCTGC 59.828 50.000 0.00 0.00 35.10 4.26
370 371 0.890542 TGCTGCCGACATTTTCTGCT 60.891 50.000 0.00 0.00 35.54 4.24
371 372 1.086696 GCTGCCGACATTTTCTGCTA 58.913 50.000 0.00 0.00 35.54 3.49
372 373 1.672881 GCTGCCGACATTTTCTGCTAT 59.327 47.619 0.00 0.00 35.54 2.97
373 374 2.540361 GCTGCCGACATTTTCTGCTATG 60.540 50.000 0.00 0.00 35.54 2.23
374 375 2.016318 TGCCGACATTTTCTGCTATGG 58.984 47.619 0.00 0.00 35.54 2.74
375 376 2.288666 GCCGACATTTTCTGCTATGGA 58.711 47.619 0.00 0.00 31.92 3.41
376 377 2.032178 GCCGACATTTTCTGCTATGGAC 59.968 50.000 0.00 0.00 31.92 4.02
377 378 3.270027 CCGACATTTTCTGCTATGGACA 58.730 45.455 0.00 0.00 0.00 4.02
378 379 3.879295 CCGACATTTTCTGCTATGGACAT 59.121 43.478 0.00 0.00 0.00 3.06
379 380 4.260907 CCGACATTTTCTGCTATGGACATG 60.261 45.833 0.00 0.00 0.00 3.21
380 381 4.260907 CGACATTTTCTGCTATGGACATGG 60.261 45.833 0.00 0.00 0.00 3.66
381 382 4.603131 ACATTTTCTGCTATGGACATGGT 58.397 39.130 0.00 0.00 0.00 3.55
382 383 5.018809 ACATTTTCTGCTATGGACATGGTT 58.981 37.500 0.00 0.00 0.00 3.67
383 384 5.481473 ACATTTTCTGCTATGGACATGGTTT 59.519 36.000 0.00 0.00 0.00 3.27
384 385 5.643379 TTTTCTGCTATGGACATGGTTTC 57.357 39.130 0.00 0.00 0.00 2.78
385 386 2.905075 TCTGCTATGGACATGGTTTCG 58.095 47.619 0.00 0.00 0.00 3.46
386 387 2.236146 TCTGCTATGGACATGGTTTCGT 59.764 45.455 0.00 0.00 0.00 3.85
387 388 2.609459 CTGCTATGGACATGGTTTCGTC 59.391 50.000 0.00 0.00 0.00 4.20
388 389 1.593006 GCTATGGACATGGTTTCGTCG 59.407 52.381 0.00 0.00 32.74 5.12
389 390 2.201732 CTATGGACATGGTTTCGTCGG 58.798 52.381 0.00 0.00 32.74 4.79
390 391 1.024579 ATGGACATGGTTTCGTCGGC 61.025 55.000 0.00 0.00 32.74 5.54
391 392 2.736682 GGACATGGTTTCGTCGGCG 61.737 63.158 1.15 1.15 39.92 6.46
392 393 2.025418 GACATGGTTTCGTCGGCGT 61.025 57.895 10.18 0.00 39.49 5.68
393 394 2.222953 GACATGGTTTCGTCGGCGTG 62.223 60.000 10.18 0.71 39.49 5.34
394 395 2.029964 ATGGTTTCGTCGGCGTGT 59.970 55.556 10.18 0.00 39.49 4.49
395 396 2.025418 ATGGTTTCGTCGGCGTGTC 61.025 57.895 10.18 0.27 39.49 3.67
396 397 2.659244 GGTTTCGTCGGCGTGTCA 60.659 61.111 10.18 0.00 39.49 3.58
397 398 2.239124 GGTTTCGTCGGCGTGTCAA 61.239 57.895 10.18 0.00 39.49 3.18
398 399 1.637402 GTTTCGTCGGCGTGTCAAA 59.363 52.632 10.18 0.00 39.49 2.69
399 400 0.233848 GTTTCGTCGGCGTGTCAAAT 59.766 50.000 10.18 0.00 39.49 2.32
400 401 0.509499 TTTCGTCGGCGTGTCAAATC 59.491 50.000 10.18 0.00 39.49 2.17
401 402 0.319211 TTCGTCGGCGTGTCAAATCT 60.319 50.000 10.18 0.00 39.49 2.40
402 403 0.319211 TCGTCGGCGTGTCAAATCTT 60.319 50.000 10.18 0.00 39.49 2.40
403 404 0.511221 CGTCGGCGTGTCAAATCTTT 59.489 50.000 6.85 0.00 0.00 2.52
404 405 1.721489 CGTCGGCGTGTCAAATCTTTG 60.721 52.381 6.85 0.00 39.48 2.77
405 406 1.263217 GTCGGCGTGTCAAATCTTTGT 59.737 47.619 6.85 0.00 39.18 2.83
406 407 2.477375 GTCGGCGTGTCAAATCTTTGTA 59.523 45.455 6.85 0.00 39.18 2.41
407 408 3.124636 GTCGGCGTGTCAAATCTTTGTAT 59.875 43.478 6.85 0.00 39.18 2.29
408 409 3.124466 TCGGCGTGTCAAATCTTTGTATG 59.876 43.478 6.85 1.56 39.18 2.39
409 410 3.171277 GGCGTGTCAAATCTTTGTATGC 58.829 45.455 13.43 13.43 39.18 3.14
410 411 3.365868 GGCGTGTCAAATCTTTGTATGCA 60.366 43.478 18.77 0.00 38.64 3.96
411 412 4.225984 GCGTGTCAAATCTTTGTATGCAA 58.774 39.130 15.33 0.00 39.18 4.08
412 413 4.088496 GCGTGTCAAATCTTTGTATGCAAC 59.912 41.667 15.33 0.00 39.18 4.17
413 414 5.451908 CGTGTCAAATCTTTGTATGCAACT 58.548 37.500 0.00 0.00 39.18 3.16
414 415 5.565259 CGTGTCAAATCTTTGTATGCAACTC 59.435 40.000 0.00 0.00 39.18 3.01
415 416 6.566564 CGTGTCAAATCTTTGTATGCAACTCT 60.567 38.462 0.00 0.00 39.18 3.24
416 417 6.798959 GTGTCAAATCTTTGTATGCAACTCTC 59.201 38.462 0.00 0.00 39.18 3.20
417 418 6.072508 TGTCAAATCTTTGTATGCAACTCTCC 60.073 38.462 0.00 0.00 39.18 3.71
418 419 6.150140 GTCAAATCTTTGTATGCAACTCTCCT 59.850 38.462 0.00 0.00 39.18 3.69
419 420 7.334421 GTCAAATCTTTGTATGCAACTCTCCTA 59.666 37.037 0.00 0.00 39.18 2.94
420 421 8.049117 TCAAATCTTTGTATGCAACTCTCCTAT 58.951 33.333 0.00 0.00 39.18 2.57
421 422 9.330063 CAAATCTTTGTATGCAACTCTCCTATA 57.670 33.333 0.00 0.00 33.82 1.31
422 423 9.905713 AAATCTTTGTATGCAACTCTCCTATAA 57.094 29.630 0.00 0.00 33.82 0.98
423 424 8.894768 ATCTTTGTATGCAACTCTCCTATAAC 57.105 34.615 0.00 0.00 33.82 1.89
424 425 7.272978 TCTTTGTATGCAACTCTCCTATAACC 58.727 38.462 0.00 0.00 33.82 2.85
425 426 5.196341 TGTATGCAACTCTCCTATAACCG 57.804 43.478 0.00 0.00 0.00 4.44
426 427 3.753294 ATGCAACTCTCCTATAACCGG 57.247 47.619 0.00 0.00 0.00 5.28
427 428 1.138266 TGCAACTCTCCTATAACCGGC 59.862 52.381 0.00 0.00 0.00 6.13
428 429 1.138266 GCAACTCTCCTATAACCGGCA 59.862 52.381 0.00 0.00 0.00 5.69
429 430 2.224305 GCAACTCTCCTATAACCGGCAT 60.224 50.000 0.00 0.00 0.00 4.40
430 431 3.393800 CAACTCTCCTATAACCGGCATG 58.606 50.000 0.00 0.00 0.00 4.06
431 432 1.971357 ACTCTCCTATAACCGGCATGG 59.029 52.381 0.00 0.00 46.41 3.66
441 442 1.427819 CCGGCATGGTTAGTTTCGC 59.572 57.895 0.00 0.00 0.00 4.70
442 443 1.060308 CGGCATGGTTAGTTTCGCG 59.940 57.895 0.00 0.00 0.00 5.87
443 444 1.355796 CGGCATGGTTAGTTTCGCGA 61.356 55.000 3.71 3.71 0.00 5.87
444 445 1.014352 GGCATGGTTAGTTTCGCGAT 58.986 50.000 10.88 0.00 0.00 4.58
445 446 1.003866 GGCATGGTTAGTTTCGCGATC 60.004 52.381 10.88 6.68 0.00 3.69
446 447 1.933853 GCATGGTTAGTTTCGCGATCT 59.066 47.619 10.88 14.39 0.00 2.75
447 448 2.033662 GCATGGTTAGTTTCGCGATCTC 60.034 50.000 10.88 3.40 0.00 2.75
448 449 3.186909 CATGGTTAGTTTCGCGATCTCA 58.813 45.455 10.88 6.87 0.00 3.27
449 450 3.520290 TGGTTAGTTTCGCGATCTCAT 57.480 42.857 10.88 0.00 0.00 2.90
450 451 3.857052 TGGTTAGTTTCGCGATCTCATT 58.143 40.909 10.88 0.00 0.00 2.57
451 452 3.863424 TGGTTAGTTTCGCGATCTCATTC 59.137 43.478 10.88 0.00 0.00 2.67
452 453 3.863424 GGTTAGTTTCGCGATCTCATTCA 59.137 43.478 10.88 0.00 0.00 2.57
453 454 4.328983 GGTTAGTTTCGCGATCTCATTCAA 59.671 41.667 10.88 0.00 0.00 2.69
454 455 3.999229 AGTTTCGCGATCTCATTCAAC 57.001 42.857 10.88 8.91 0.00 3.18
455 456 3.589988 AGTTTCGCGATCTCATTCAACT 58.410 40.909 10.88 11.35 0.00 3.16
456 457 3.997021 AGTTTCGCGATCTCATTCAACTT 59.003 39.130 10.88 0.00 0.00 2.66
457 458 4.452455 AGTTTCGCGATCTCATTCAACTTT 59.548 37.500 10.88 0.00 0.00 2.66
458 459 3.997319 TCGCGATCTCATTCAACTTTG 57.003 42.857 3.71 0.00 0.00 2.77
459 460 2.672874 TCGCGATCTCATTCAACTTTGG 59.327 45.455 3.71 0.00 0.00 3.28
460 461 2.789092 CGCGATCTCATTCAACTTTGGC 60.789 50.000 0.00 0.00 0.00 4.52
461 462 2.421424 GCGATCTCATTCAACTTTGGCT 59.579 45.455 0.00 0.00 0.00 4.75
462 463 3.486542 GCGATCTCATTCAACTTTGGCTC 60.487 47.826 0.00 0.00 0.00 4.70
463 464 3.242220 CGATCTCATTCAACTTTGGCTCG 60.242 47.826 0.00 0.00 0.00 5.03
464 465 1.806542 TCTCATTCAACTTTGGCTCGC 59.193 47.619 0.00 0.00 0.00 5.03
465 466 0.881118 TCATTCAACTTTGGCTCGCC 59.119 50.000 0.00 0.00 0.00 5.54
466 467 0.454957 CATTCAACTTTGGCTCGCCG 60.455 55.000 3.14 0.00 39.42 6.46
467 468 0.605319 ATTCAACTTTGGCTCGCCGA 60.605 50.000 3.14 0.00 39.42 5.54
468 469 1.503818 TTCAACTTTGGCTCGCCGAC 61.504 55.000 3.14 0.00 39.42 4.79
469 470 2.110213 AACTTTGGCTCGCCGACA 59.890 55.556 3.14 0.00 39.42 4.35
470 471 1.961277 AACTTTGGCTCGCCGACAG 60.961 57.895 3.14 4.96 39.42 3.51
471 472 2.357517 CTTTGGCTCGCCGACAGT 60.358 61.111 3.14 0.00 39.42 3.55
472 473 1.961277 CTTTGGCTCGCCGACAGTT 60.961 57.895 3.14 0.00 39.42 3.16
473 474 2.175184 CTTTGGCTCGCCGACAGTTG 62.175 60.000 3.14 0.00 39.42 3.16
476 477 3.782244 GCTCGCCGACAGTTGCAG 61.782 66.667 0.00 0.00 0.00 4.41
477 478 3.782244 CTCGCCGACAGTTGCAGC 61.782 66.667 0.00 0.00 0.00 5.25
478 479 4.600576 TCGCCGACAGTTGCAGCA 62.601 61.111 2.55 0.00 0.00 4.41
479 480 4.081030 CGCCGACAGTTGCAGCAG 62.081 66.667 2.55 0.00 0.00 4.24
480 481 4.395583 GCCGACAGTTGCAGCAGC 62.396 66.667 2.55 0.00 42.57 5.25
481 482 3.730761 CCGACAGTTGCAGCAGCC 61.731 66.667 5.49 0.00 41.13 4.85
482 483 2.667536 CGACAGTTGCAGCAGCCT 60.668 61.111 5.49 0.00 41.13 4.58
483 484 2.675056 CGACAGTTGCAGCAGCCTC 61.675 63.158 5.49 0.22 41.13 4.70
514 515 0.689055 GGGTGACGGTTAGGTTTCCT 59.311 55.000 0.00 0.00 37.71 3.36
558 560 1.475682 CGCCTAGGGTTTACGTCTCTT 59.524 52.381 11.72 0.00 0.00 2.85
587 589 1.333636 CCGCACCTTCCTCAGATCCT 61.334 60.000 0.00 0.00 0.00 3.24
590 592 2.637947 GCACCTTCCTCAGATCCTTTC 58.362 52.381 0.00 0.00 0.00 2.62
591 593 2.238395 GCACCTTCCTCAGATCCTTTCT 59.762 50.000 0.00 0.00 33.90 2.52
649 657 1.696314 ACCCCGCATCCTAACCCAT 60.696 57.895 0.00 0.00 0.00 4.00
651 659 1.301716 CCCGCATCCTAACCCATCG 60.302 63.158 0.00 0.00 0.00 3.84
660 668 0.909623 CTAACCCATCGTCCACCCTT 59.090 55.000 0.00 0.00 0.00 3.95
717 725 2.377531 CACCACCCCTAACCCTAGTTTT 59.622 50.000 0.00 0.00 37.42 2.43
718 726 2.646297 ACCACCCCTAACCCTAGTTTTC 59.354 50.000 0.00 0.00 37.42 2.29
719 727 2.355412 CCACCCCTAACCCTAGTTTTCG 60.355 54.545 0.00 0.00 37.42 3.46
720 728 1.911357 ACCCCTAACCCTAGTTTTCGG 59.089 52.381 0.00 0.00 37.42 4.30
721 729 1.911357 CCCCTAACCCTAGTTTTCGGT 59.089 52.381 0.00 0.00 37.42 4.69
722 730 2.093288 CCCCTAACCCTAGTTTTCGGTC 60.093 54.545 0.00 0.00 37.42 4.79
723 731 2.093288 CCCTAACCCTAGTTTTCGGTCC 60.093 54.545 0.00 0.00 37.42 4.46
724 732 2.836372 CCTAACCCTAGTTTTCGGTCCT 59.164 50.000 0.00 0.00 37.42 3.85
725 733 3.262660 CCTAACCCTAGTTTTCGGTCCTT 59.737 47.826 0.00 0.00 37.42 3.36
726 734 2.853235 ACCCTAGTTTTCGGTCCTTG 57.147 50.000 0.00 0.00 0.00 3.61
727 735 1.350019 ACCCTAGTTTTCGGTCCTTGG 59.650 52.381 0.00 0.00 0.00 3.61
728 736 1.350019 CCCTAGTTTTCGGTCCTTGGT 59.650 52.381 0.00 0.00 0.00 3.67
729 737 2.224695 CCCTAGTTTTCGGTCCTTGGTT 60.225 50.000 0.00 0.00 0.00 3.67
730 738 3.072211 CCTAGTTTTCGGTCCTTGGTTC 58.928 50.000 0.00 0.00 0.00 3.62
731 739 3.244457 CCTAGTTTTCGGTCCTTGGTTCT 60.244 47.826 0.00 0.00 0.00 3.01
778 799 3.531538 GCTTTGGTTCTGATGGATCGTA 58.468 45.455 0.00 0.00 0.00 3.43
786 807 2.300152 TCTGATGGATCGTATGGAAGGC 59.700 50.000 0.00 0.00 0.00 4.35
915 936 4.078639 GCTGTCTGATAAACCAGCCTAT 57.921 45.455 6.05 0.00 43.45 2.57
936 957 3.785486 TGCTGAAGGTATGATCAACTCG 58.215 45.455 0.00 0.00 0.00 4.18
939 960 4.499865 GCTGAAGGTATGATCAACTCGCTA 60.500 45.833 0.00 0.00 0.00 4.26
957 978 0.339859 TAGGCAGGATCTGGTGTCCT 59.660 55.000 0.00 2.87 46.92 3.85
960 981 1.689575 GGCAGGATCTGGTGTCCTCTA 60.690 57.143 0.00 0.00 44.18 2.43
964 985 3.383185 CAGGATCTGGTGTCCTCTAAGAC 59.617 52.174 0.00 0.00 44.18 3.01
969 990 2.420722 CTGGTGTCCTCTAAGACGTCTC 59.579 54.545 20.33 4.79 39.77 3.36
994 1015 1.483415 GTAAGGACCTGGGCGACAATA 59.517 52.381 0.00 0.00 0.00 1.90
995 1016 0.252197 AAGGACCTGGGCGACAATAC 59.748 55.000 0.00 0.00 0.00 1.89
1071 1092 2.226437 CCCTTGGATGTTCAACAACTCG 59.774 50.000 0.00 0.00 33.17 4.18
1086 1107 2.525629 TCGCTCCTGGTGGTGGAA 60.526 61.111 0.00 0.00 32.61 3.53
1089 1110 1.003233 GCTCCTGGTGGTGGAAGAC 60.003 63.158 0.00 0.00 32.61 3.01
1098 1119 2.224769 GGTGGTGGAAGACTTTGATCCA 60.225 50.000 0.00 0.00 40.84 3.41
1101 1122 1.734465 GTGGAAGACTTTGATCCAGCG 59.266 52.381 0.00 0.00 43.59 5.18
1107 1128 2.564947 AGACTTTGATCCAGCGAAGAGT 59.435 45.455 0.00 0.00 34.15 3.24
1134 1155 9.654663 ACCAAAGACTATAAGTTCATAACAGTC 57.345 33.333 0.00 0.00 32.90 3.51
1161 1182 0.322546 GGGTGCGGGTCTTTGATCTT 60.323 55.000 0.00 0.00 0.00 2.40
1164 1185 0.391130 TGCGGGTCTTTGATCTTCCG 60.391 55.000 0.00 0.00 40.33 4.30
1197 1218 2.829003 CGAGAGGCGGGACTAGCA 60.829 66.667 0.00 0.00 36.03 3.49
1214 1235 3.159213 AGCAATTGGAGACATTGTGGA 57.841 42.857 7.72 0.00 42.32 4.02
1224 1245 0.253160 ACATTGTGGAGGAGGCCCTA 60.253 55.000 0.00 0.00 44.53 3.53
1231 1252 1.621377 GAGGAGGCCCTAGAGGTCA 59.379 63.158 0.00 0.00 45.84 4.02
1296 1317 3.505293 TGAAAATTCGCATGGACATCACA 59.495 39.130 0.00 0.00 0.00 3.58
1324 1345 2.552599 TATGCGTGGTTTTGTCCTGA 57.447 45.000 0.00 0.00 0.00 3.86
1339 1360 1.153745 CTGAAGAAGGAGGACGGCG 60.154 63.158 4.80 4.80 0.00 6.46
1350 1371 3.112709 GACGGCGAGGCACAAGAC 61.113 66.667 16.62 0.00 0.00 3.01
1361 1382 3.499338 AGGCACAAGACCATGATGAAAA 58.501 40.909 0.00 0.00 0.00 2.29
1395 1416 1.385206 GGAAGGGCAGGAGGAGGAT 60.385 63.158 0.00 0.00 0.00 3.24
1442 1463 7.890127 TGAATTTCTCCCAGATTTCTGTTACAT 59.110 33.333 6.81 0.00 42.27 2.29
1464 1485 5.612725 TCTGTGGTATGCTTGATCATGTA 57.387 39.130 10.05 6.18 0.00 2.29
1501 1523 7.419172 GCTCCTATAAGCTAAAGAAGGGAGAAA 60.419 40.741 15.99 0.00 39.87 2.52
1508 1530 5.891551 AGCTAAAGAAGGGAGAAACAAACAA 59.108 36.000 0.00 0.00 0.00 2.83
1521 1543 0.390860 CAAACAATTTGGCCCGTGGA 59.609 50.000 0.00 0.00 37.01 4.02
1544 1566 5.505181 TGAAGGCTTTCATTCCTAGAAGT 57.495 39.130 7.24 0.00 38.37 3.01
1568 1590 0.174617 GTGAGACCAGCAGAGGTAGC 59.825 60.000 0.00 0.00 43.38 3.58
1589 1611 1.304381 GAGTGATGGCAGGGGCAAA 60.304 57.895 0.00 0.00 42.43 3.68
1595 1617 0.704076 ATGGCAGGGGCAAACTAGAA 59.296 50.000 0.00 0.00 42.43 2.10
1598 1620 0.681243 GCAGGGGCAAACTAGAAGGG 60.681 60.000 0.00 0.00 40.72 3.95
1616 1638 3.953775 CGAAGCAGTGGGGGTGGT 61.954 66.667 0.00 0.00 0.00 4.16
1667 1689 1.728971 CATTCAGGAAGCGACAGTGAC 59.271 52.381 0.00 0.00 0.00 3.67
1682 1704 2.125350 GACAGCTGGCGGAAGGAG 60.125 66.667 19.93 0.00 0.00 3.69
1685 1707 1.449246 CAGCTGGCGGAAGGAGAAG 60.449 63.158 5.57 0.00 0.00 2.85
1686 1708 2.821810 GCTGGCGGAAGGAGAAGC 60.822 66.667 0.00 0.00 0.00 3.86
1690 1712 4.840005 GCGGAAGGAGAAGCCGGG 62.840 72.222 2.18 0.00 44.92 5.73
1727 1749 1.218316 GGAGTTGGAGAACCGCGAT 59.782 57.895 8.23 0.00 39.42 4.58
1739 1761 1.737735 CCGCGATGCTGAAGTGACA 60.738 57.895 8.23 0.00 0.00 3.58
1754 1776 4.640771 AGTGACAAGCCCTATGAAGAAA 57.359 40.909 0.00 0.00 0.00 2.52
1783 1805 0.609957 CCCATGCAAGTTGAGGCTCA 60.610 55.000 14.43 14.43 0.00 4.26
1792 1814 4.500375 GCAAGTTGAGGCTCAAGTCAAATT 60.500 41.667 31.74 17.02 38.97 1.82
1824 1846 3.569194 TTGTGAAGGGAACAACAGCTA 57.431 42.857 0.00 0.00 32.71 3.32
1825 1847 2.846193 TGTGAAGGGAACAACAGCTAC 58.154 47.619 0.00 0.00 0.00 3.58
1847 1869 4.865365 ACGAAGCAACTAACTTATGAGAGC 59.135 41.667 0.00 0.00 0.00 4.09
1854 1876 5.514274 ACTAACTTATGAGAGCAGAGAGC 57.486 43.478 0.00 0.00 46.19 4.09
1871 1893 0.768221 AGCCTGAGGGAGAACACCAA 60.768 55.000 0.00 0.00 33.58 3.67
1879 1901 1.913419 GGGAGAACACCAATACCAGGA 59.087 52.381 0.00 0.00 0.00 3.86
1880 1902 2.509964 GGGAGAACACCAATACCAGGAT 59.490 50.000 0.00 0.00 0.00 3.24
1966 1988 0.328258 AAGGGAAGCGCTGTATTGGT 59.672 50.000 12.58 0.00 0.00 3.67
1991 2013 2.677902 GCAGGATGTCGTGGAAGAATCA 60.678 50.000 5.04 0.00 39.31 2.57
2039 2061 1.989508 CAAGGGGAATGGGGGCAAC 60.990 63.158 0.00 0.00 0.00 4.17
2089 2111 3.075181 AGGAGAGGAGGAAGGATATGGA 58.925 50.000 0.00 0.00 0.00 3.41
2091 2113 4.866780 AGGAGAGGAGGAAGGATATGGATA 59.133 45.833 0.00 0.00 0.00 2.59
2214 2236 1.359474 AGAGCTCTCCCAACACTCCTA 59.641 52.381 11.45 0.00 0.00 2.94
2228 2250 0.984230 CTCCTAAAGTGGGGCTGTCA 59.016 55.000 0.00 0.00 0.00 3.58
2257 2279 3.093278 CAGGCCGCGATGAAAGTC 58.907 61.111 8.23 0.00 0.00 3.01
2465 2487 1.253593 GGGGCTTGCTCTCTTTTGGG 61.254 60.000 0.00 0.00 0.00 4.12
2501 2523 2.576648 GTTAACCTGAGATGGAAGGGGT 59.423 50.000 0.00 0.00 37.94 4.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.086685 ACATCATCCGGTAAAAACCCTATAT 57.913 36.000 0.00 0.00 0.00 0.86
2 3 6.503560 ACATCATCCGGTAAAAACCCTATA 57.496 37.500 0.00 0.00 0.00 1.31
3 4 5.382664 ACATCATCCGGTAAAAACCCTAT 57.617 39.130 0.00 0.00 0.00 2.57
4 5 4.847990 ACATCATCCGGTAAAAACCCTA 57.152 40.909 0.00 0.00 0.00 3.53
5 6 3.732048 ACATCATCCGGTAAAAACCCT 57.268 42.857 0.00 0.00 0.00 4.34
6 7 4.381185 GGAAACATCATCCGGTAAAAACCC 60.381 45.833 0.00 0.00 0.00 4.11
7 8 4.381185 GGGAAACATCATCCGGTAAAAACC 60.381 45.833 0.00 0.00 37.87 3.27
8 9 4.218852 TGGGAAACATCATCCGGTAAAAAC 59.781 41.667 0.00 0.00 37.87 2.43
9 10 4.408276 TGGGAAACATCATCCGGTAAAAA 58.592 39.130 0.00 0.00 37.87 1.94
10 11 4.013728 CTGGGAAACATCATCCGGTAAAA 58.986 43.478 0.00 0.00 37.87 1.52
11 12 3.616219 CTGGGAAACATCATCCGGTAAA 58.384 45.455 0.00 0.00 37.87 2.01
12 13 2.092646 CCTGGGAAACATCATCCGGTAA 60.093 50.000 0.00 0.00 37.87 2.85
13 14 1.488812 CCTGGGAAACATCATCCGGTA 59.511 52.381 0.00 0.00 37.87 4.02
14 15 0.255890 CCTGGGAAACATCATCCGGT 59.744 55.000 0.00 0.00 37.87 5.28
15 16 0.466189 CCCTGGGAAACATCATCCGG 60.466 60.000 7.01 0.00 37.87 5.14
16 17 1.103398 GCCCTGGGAAACATCATCCG 61.103 60.000 19.27 0.00 37.87 4.18
17 18 0.756815 GGCCCTGGGAAACATCATCC 60.757 60.000 19.27 0.00 36.16 3.51
18 19 0.756815 GGGCCCTGGGAAACATCATC 60.757 60.000 19.27 0.00 0.00 2.92
19 20 1.311059 GGGCCCTGGGAAACATCAT 59.689 57.895 19.27 0.00 0.00 2.45
20 21 2.770130 GGGCCCTGGGAAACATCA 59.230 61.111 19.27 0.00 0.00 3.07
21 22 2.440247 CGGGCCCTGGGAAACATC 60.440 66.667 22.43 0.00 0.00 3.06
22 23 2.499303 CTTCGGGCCCTGGGAAACAT 62.499 60.000 22.43 0.00 0.00 2.71
23 24 3.179339 TTCGGGCCCTGGGAAACA 61.179 61.111 22.43 0.00 0.00 2.83
24 25 2.361230 CTTCGGGCCCTGGGAAAC 60.361 66.667 22.43 5.37 0.00 2.78
25 26 4.360405 GCTTCGGGCCCTGGGAAA 62.360 66.667 22.43 5.26 34.27 3.13
29 30 4.785453 GACAGCTTCGGGCCCTGG 62.785 72.222 22.43 10.72 43.05 4.45
30 31 1.899437 TTAGACAGCTTCGGGCCCTG 61.899 60.000 22.43 13.78 43.05 4.45
31 32 1.198759 TTTAGACAGCTTCGGGCCCT 61.199 55.000 22.43 0.00 43.05 5.19
32 33 1.025113 GTTTAGACAGCTTCGGGCCC 61.025 60.000 13.57 13.57 43.05 5.80
33 34 0.036294 AGTTTAGACAGCTTCGGGCC 60.036 55.000 0.00 0.00 43.05 5.80
34 35 1.360820 GAGTTTAGACAGCTTCGGGC 58.639 55.000 0.00 0.00 42.19 6.13
35 36 1.405661 GGGAGTTTAGACAGCTTCGGG 60.406 57.143 0.00 0.00 0.00 5.14
36 37 1.736032 CGGGAGTTTAGACAGCTTCGG 60.736 57.143 0.00 0.00 0.00 4.30
37 38 1.067776 ACGGGAGTTTAGACAGCTTCG 60.068 52.381 0.00 0.00 43.33 3.79
38 39 2.745515 ACGGGAGTTTAGACAGCTTC 57.254 50.000 0.00 0.00 43.33 3.86
51 52 0.600255 GACACACCACAAGACGGGAG 60.600 60.000 0.00 0.00 0.00 4.30
52 53 1.046472 AGACACACCACAAGACGGGA 61.046 55.000 0.00 0.00 0.00 5.14
53 54 0.600255 GAGACACACCACAAGACGGG 60.600 60.000 0.00 0.00 0.00 5.28
54 55 0.389391 AGAGACACACCACAAGACGG 59.611 55.000 0.00 0.00 0.00 4.79
55 56 1.860950 CAAGAGACACACCACAAGACG 59.139 52.381 0.00 0.00 0.00 4.18
56 57 3.179443 TCAAGAGACACACCACAAGAC 57.821 47.619 0.00 0.00 0.00 3.01
57 58 4.380531 GAATCAAGAGACACACCACAAGA 58.619 43.478 0.00 0.00 0.00 3.02
58 59 3.499918 GGAATCAAGAGACACACCACAAG 59.500 47.826 0.00 0.00 0.00 3.16
59 60 3.476552 GGAATCAAGAGACACACCACAA 58.523 45.455 0.00 0.00 0.00 3.33
60 61 2.547855 CGGAATCAAGAGACACACCACA 60.548 50.000 0.00 0.00 0.00 4.17
61 62 2.069273 CGGAATCAAGAGACACACCAC 58.931 52.381 0.00 0.00 0.00 4.16
62 63 1.608025 GCGGAATCAAGAGACACACCA 60.608 52.381 0.00 0.00 0.00 4.17
63 64 1.079503 GCGGAATCAAGAGACACACC 58.920 55.000 0.00 0.00 0.00 4.16
64 65 1.996191 GAGCGGAATCAAGAGACACAC 59.004 52.381 0.00 0.00 0.00 3.82
65 66 1.618343 TGAGCGGAATCAAGAGACACA 59.382 47.619 0.00 0.00 0.00 3.72
66 67 2.370281 TGAGCGGAATCAAGAGACAC 57.630 50.000 0.00 0.00 0.00 3.67
67 68 2.612972 GGTTGAGCGGAATCAAGAGACA 60.613 50.000 0.00 0.00 39.78 3.41
68 69 2.003301 GGTTGAGCGGAATCAAGAGAC 58.997 52.381 0.00 0.00 39.78 3.36
69 70 1.066143 GGGTTGAGCGGAATCAAGAGA 60.066 52.381 0.00 0.00 39.78 3.10
70 71 1.373570 GGGTTGAGCGGAATCAAGAG 58.626 55.000 0.00 0.00 39.78 2.85
71 72 0.035439 GGGGTTGAGCGGAATCAAGA 60.035 55.000 0.00 0.00 39.78 3.02
72 73 0.035056 AGGGGTTGAGCGGAATCAAG 60.035 55.000 0.00 0.00 39.78 3.02
73 74 0.035439 GAGGGGTTGAGCGGAATCAA 60.035 55.000 0.00 0.00 36.85 2.57
74 75 0.909610 AGAGGGGTTGAGCGGAATCA 60.910 55.000 0.00 0.00 0.00 2.57
75 76 0.179070 GAGAGGGGTTGAGCGGAATC 60.179 60.000 0.00 0.00 0.00 2.52
76 77 0.909610 TGAGAGGGGTTGAGCGGAAT 60.910 55.000 0.00 0.00 0.00 3.01
77 78 1.535444 TGAGAGGGGTTGAGCGGAA 60.535 57.895 0.00 0.00 0.00 4.30
78 79 1.984570 CTGAGAGGGGTTGAGCGGA 60.985 63.158 0.00 0.00 0.00 5.54
79 80 2.581354 CTGAGAGGGGTTGAGCGG 59.419 66.667 0.00 0.00 0.00 5.52
80 81 2.581354 CCTGAGAGGGGTTGAGCG 59.419 66.667 0.00 0.00 0.00 5.03
81 82 0.978146 TAGCCTGAGAGGGGTTGAGC 60.978 60.000 0.00 0.00 38.18 4.26
82 83 0.827368 GTAGCCTGAGAGGGGTTGAG 59.173 60.000 0.00 0.00 38.18 3.02
83 84 0.617820 GGTAGCCTGAGAGGGGTTGA 60.618 60.000 0.00 0.00 38.18 3.18
84 85 0.909610 TGGTAGCCTGAGAGGGGTTG 60.910 60.000 0.00 0.00 38.18 3.77
85 86 0.910088 GTGGTAGCCTGAGAGGGGTT 60.910 60.000 0.00 0.00 38.18 4.11
86 87 1.306226 GTGGTAGCCTGAGAGGGGT 60.306 63.158 0.00 0.00 40.47 4.95
87 88 0.692419 ATGTGGTAGCCTGAGAGGGG 60.692 60.000 0.00 0.00 35.37 4.79
88 89 1.967066 CTATGTGGTAGCCTGAGAGGG 59.033 57.143 0.00 0.00 35.37 4.30
89 90 2.950781 TCTATGTGGTAGCCTGAGAGG 58.049 52.381 0.00 0.00 38.80 3.69
90 91 3.305950 GCATCTATGTGGTAGCCTGAGAG 60.306 52.174 0.00 0.00 0.00 3.20
91 92 2.630098 GCATCTATGTGGTAGCCTGAGA 59.370 50.000 0.00 0.00 0.00 3.27
92 93 2.608998 CGCATCTATGTGGTAGCCTGAG 60.609 54.545 0.00 0.00 34.78 3.35
93 94 1.341209 CGCATCTATGTGGTAGCCTGA 59.659 52.381 0.00 0.00 34.78 3.86
94 95 1.069204 ACGCATCTATGTGGTAGCCTG 59.931 52.381 8.28 0.00 42.35 4.85
95 96 1.414158 ACGCATCTATGTGGTAGCCT 58.586 50.000 8.28 0.00 42.35 4.58
96 97 1.867233 CAACGCATCTATGTGGTAGCC 59.133 52.381 8.28 0.00 42.35 3.93
97 98 1.867233 CCAACGCATCTATGTGGTAGC 59.133 52.381 8.28 0.00 42.35 3.58
98 99 1.867233 GCCAACGCATCTATGTGGTAG 59.133 52.381 8.28 0.00 42.35 3.18
99 100 1.474320 GGCCAACGCATCTATGTGGTA 60.474 52.381 0.00 0.00 42.35 3.25
100 101 0.748005 GGCCAACGCATCTATGTGGT 60.748 55.000 0.00 0.00 42.35 4.16
101 102 0.464373 AGGCCAACGCATCTATGTGG 60.464 55.000 5.01 1.79 42.35 4.17
102 103 0.940126 GAGGCCAACGCATCTATGTG 59.060 55.000 5.01 2.02 42.54 3.21
103 104 0.530650 CGAGGCCAACGCATCTATGT 60.531 55.000 5.01 0.00 43.65 2.29
104 105 2.229039 CGAGGCCAACGCATCTATG 58.771 57.895 5.01 0.00 43.65 2.23
105 106 4.758692 CGAGGCCAACGCATCTAT 57.241 55.556 5.01 0.00 43.65 1.98
113 114 3.479269 CTTCGTCGCGAGGCCAAC 61.479 66.667 23.21 3.46 37.14 3.77
114 115 3.909258 GACTTCGTCGCGAGGCCAA 62.909 63.158 23.21 12.61 36.44 4.52
115 116 4.415332 GACTTCGTCGCGAGGCCA 62.415 66.667 23.21 11.53 36.44 5.36
117 118 3.628280 AAGGACTTCGTCGCGAGGC 62.628 63.158 23.21 7.20 36.44 4.70
118 119 1.801913 CAAGGACTTCGTCGCGAGG 60.802 63.158 22.14 22.14 38.87 4.63
119 120 2.437343 GCAAGGACTTCGTCGCGAG 61.437 63.158 10.24 3.82 37.14 5.03
120 121 2.430244 GCAAGGACTTCGTCGCGA 60.430 61.111 3.71 3.71 32.65 5.87
121 122 2.733218 TGCAAGGACTTCGTCGCG 60.733 61.111 0.00 0.00 32.65 5.87
122 123 0.388134 TAGTGCAAGGACTTCGTCGC 60.388 55.000 0.00 0.00 32.65 5.19
123 124 1.986378 CTTAGTGCAAGGACTTCGTCG 59.014 52.381 0.00 0.00 32.65 5.12
133 134 2.926200 CGTCAGATGTCCTTAGTGCAAG 59.074 50.000 0.00 0.00 0.00 4.01
134 135 2.299013 ACGTCAGATGTCCTTAGTGCAA 59.701 45.455 0.00 0.00 0.00 4.08
135 136 1.893137 ACGTCAGATGTCCTTAGTGCA 59.107 47.619 0.00 0.00 0.00 4.57
136 137 2.263077 CACGTCAGATGTCCTTAGTGC 58.737 52.381 0.00 0.00 0.00 4.40
137 138 3.577649 ACACGTCAGATGTCCTTAGTG 57.422 47.619 0.00 0.00 34.85 2.74
138 139 5.717078 TTAACACGTCAGATGTCCTTAGT 57.283 39.130 0.00 0.00 0.00 2.24
139 140 6.255887 GGAATTAACACGTCAGATGTCCTTAG 59.744 42.308 0.00 0.00 0.00 2.18
140 141 6.103997 GGAATTAACACGTCAGATGTCCTTA 58.896 40.000 0.00 0.00 0.00 2.69
141 142 4.935808 GGAATTAACACGTCAGATGTCCTT 59.064 41.667 0.00 0.00 0.00 3.36
142 143 4.020573 TGGAATTAACACGTCAGATGTCCT 60.021 41.667 0.00 0.00 0.00 3.85
143 144 4.092968 GTGGAATTAACACGTCAGATGTCC 59.907 45.833 0.00 0.00 0.00 4.02
144 145 5.204673 GTGGAATTAACACGTCAGATGTC 57.795 43.478 0.00 0.00 0.00 3.06
154 155 2.159627 CCAGCTGTCGTGGAATTAACAC 59.840 50.000 13.81 3.32 37.23 3.32
155 156 2.422597 CCAGCTGTCGTGGAATTAACA 58.577 47.619 13.81 0.00 37.23 2.41
156 157 1.130561 GCCAGCTGTCGTGGAATTAAC 59.869 52.381 13.81 0.00 37.23 2.01
157 158 1.448985 GCCAGCTGTCGTGGAATTAA 58.551 50.000 13.81 0.00 37.23 1.40
158 159 0.739462 CGCCAGCTGTCGTGGAATTA 60.739 55.000 9.38 0.00 37.23 1.40
159 160 2.034879 CGCCAGCTGTCGTGGAATT 61.035 57.895 9.38 0.00 37.23 2.17
160 161 2.434884 CGCCAGCTGTCGTGGAAT 60.435 61.111 9.38 0.00 37.23 3.01
191 192 4.444024 CAACACCATCGTGCGCGG 62.444 66.667 21.04 6.32 44.40 6.46
192 193 3.353114 CTCAACACCATCGTGCGCG 62.353 63.158 14.79 14.79 44.40 6.86
193 194 1.841663 AACTCAACACCATCGTGCGC 61.842 55.000 0.00 0.00 44.40 6.09
194 195 0.163788 GAACTCAACACCATCGTGCG 59.836 55.000 0.00 0.00 44.40 5.34
195 196 1.512926 AGAACTCAACACCATCGTGC 58.487 50.000 0.00 0.00 44.40 5.34
196 197 2.224079 CCAAGAACTCAACACCATCGTG 59.776 50.000 0.00 0.00 46.11 4.35
197 198 2.104111 TCCAAGAACTCAACACCATCGT 59.896 45.455 0.00 0.00 0.00 3.73
198 199 2.738846 CTCCAAGAACTCAACACCATCG 59.261 50.000 0.00 0.00 0.00 3.84
199 200 3.077359 CCTCCAAGAACTCAACACCATC 58.923 50.000 0.00 0.00 0.00 3.51
200 201 2.224867 CCCTCCAAGAACTCAACACCAT 60.225 50.000 0.00 0.00 0.00 3.55
201 202 1.142870 CCCTCCAAGAACTCAACACCA 59.857 52.381 0.00 0.00 0.00 4.17
202 203 1.143073 ACCCTCCAAGAACTCAACACC 59.857 52.381 0.00 0.00 0.00 4.16
203 204 2.640316 ACCCTCCAAGAACTCAACAC 57.360 50.000 0.00 0.00 0.00 3.32
204 205 2.158667 GGAACCCTCCAAGAACTCAACA 60.159 50.000 0.00 0.00 41.96 3.33
205 206 2.505405 GGAACCCTCCAAGAACTCAAC 58.495 52.381 0.00 0.00 41.96 3.18
206 207 2.951229 GGAACCCTCCAAGAACTCAA 57.049 50.000 0.00 0.00 41.96 3.02
221 222 0.466124 CCTCTCGATCCTTGGGGAAC 59.534 60.000 0.00 0.00 45.78 3.62
222 223 1.338136 GCCTCTCGATCCTTGGGGAA 61.338 60.000 0.00 0.00 45.78 3.97
223 224 1.762460 GCCTCTCGATCCTTGGGGA 60.762 63.158 0.00 0.00 46.81 4.81
224 225 1.753368 GAGCCTCTCGATCCTTGGGG 61.753 65.000 0.00 0.00 0.00 4.96
225 226 1.745264 GAGCCTCTCGATCCTTGGG 59.255 63.158 0.00 0.00 0.00 4.12
235 236 1.522580 GGCCAATCACGAGCCTCTC 60.523 63.158 0.00 0.00 43.62 3.20
236 237 2.586792 GGCCAATCACGAGCCTCT 59.413 61.111 0.00 0.00 43.62 3.69
237 238 2.892425 CGGCCAATCACGAGCCTC 60.892 66.667 2.24 0.00 44.84 4.70
238 239 4.473520 CCGGCCAATCACGAGCCT 62.474 66.667 2.24 0.00 44.84 4.58
239 240 3.757248 ATCCGGCCAATCACGAGCC 62.757 63.158 2.24 0.00 43.53 4.70
240 241 2.203070 ATCCGGCCAATCACGAGC 60.203 61.111 2.24 0.00 0.00 5.03
241 242 0.461870 TTCATCCGGCCAATCACGAG 60.462 55.000 2.24 0.00 0.00 4.18
242 243 0.461870 CTTCATCCGGCCAATCACGA 60.462 55.000 2.24 0.00 0.00 4.35
243 244 0.461870 TCTTCATCCGGCCAATCACG 60.462 55.000 2.24 0.00 0.00 4.35
244 245 1.672881 CTTCTTCATCCGGCCAATCAC 59.327 52.381 2.24 0.00 0.00 3.06
245 246 1.559219 TCTTCTTCATCCGGCCAATCA 59.441 47.619 2.24 0.00 0.00 2.57
246 247 2.332063 TCTTCTTCATCCGGCCAATC 57.668 50.000 2.24 0.00 0.00 2.67
247 248 2.369394 GTTCTTCTTCATCCGGCCAAT 58.631 47.619 2.24 0.00 0.00 3.16
248 249 1.613255 GGTTCTTCTTCATCCGGCCAA 60.613 52.381 2.24 0.00 0.00 4.52
249 250 0.035439 GGTTCTTCTTCATCCGGCCA 60.035 55.000 2.24 0.00 0.00 5.36
250 251 1.090052 CGGTTCTTCTTCATCCGGCC 61.090 60.000 0.00 0.00 37.92 6.13
251 252 2.384203 CGGTTCTTCTTCATCCGGC 58.616 57.895 0.00 0.00 37.92 6.13
253 254 0.391130 TGCCGGTTCTTCTTCATCCG 60.391 55.000 1.90 0.00 40.72 4.18
254 255 1.087501 GTGCCGGTTCTTCTTCATCC 58.912 55.000 1.90 0.00 0.00 3.51
255 256 0.721718 CGTGCCGGTTCTTCTTCATC 59.278 55.000 1.90 0.00 0.00 2.92
256 257 0.320374 TCGTGCCGGTTCTTCTTCAT 59.680 50.000 1.90 0.00 0.00 2.57
257 258 0.319555 CTCGTGCCGGTTCTTCTTCA 60.320 55.000 1.90 0.00 0.00 3.02
258 259 0.038526 TCTCGTGCCGGTTCTTCTTC 60.039 55.000 1.90 0.00 0.00 2.87
259 260 0.319641 GTCTCGTGCCGGTTCTTCTT 60.320 55.000 1.90 0.00 0.00 2.52
260 261 1.289380 GTCTCGTGCCGGTTCTTCT 59.711 57.895 1.90 0.00 0.00 2.85
261 262 0.599204 TTGTCTCGTGCCGGTTCTTC 60.599 55.000 1.90 0.00 0.00 2.87
262 263 0.878961 GTTGTCTCGTGCCGGTTCTT 60.879 55.000 1.90 0.00 0.00 2.52
263 264 1.300697 GTTGTCTCGTGCCGGTTCT 60.301 57.895 1.90 0.00 0.00 3.01
264 265 2.315386 GGTTGTCTCGTGCCGGTTC 61.315 63.158 1.90 0.00 0.00 3.62
265 266 2.280592 GGTTGTCTCGTGCCGGTT 60.281 61.111 1.90 0.00 0.00 4.44
266 267 1.537814 TATGGTTGTCTCGTGCCGGT 61.538 55.000 1.90 0.00 0.00 5.28
267 268 1.082117 GTATGGTTGTCTCGTGCCGG 61.082 60.000 0.00 0.00 0.00 6.13
268 269 0.389296 TGTATGGTTGTCTCGTGCCG 60.389 55.000 0.00 0.00 0.00 5.69
269 270 1.076332 GTGTATGGTTGTCTCGTGCC 58.924 55.000 0.00 0.00 0.00 5.01
270 271 0.713883 CGTGTATGGTTGTCTCGTGC 59.286 55.000 0.00 0.00 0.00 5.34
271 272 2.341318 TCGTGTATGGTTGTCTCGTG 57.659 50.000 0.00 0.00 0.00 4.35
272 273 3.587797 AATCGTGTATGGTTGTCTCGT 57.412 42.857 0.00 0.00 0.00 4.18
273 274 5.100259 AGTAAATCGTGTATGGTTGTCTCG 58.900 41.667 0.00 0.00 0.00 4.04
274 275 6.963049 AAGTAAATCGTGTATGGTTGTCTC 57.037 37.500 0.00 0.00 0.00 3.36
275 276 6.148811 CCAAAGTAAATCGTGTATGGTTGTCT 59.851 38.462 0.00 0.00 0.00 3.41
276 277 6.148150 TCCAAAGTAAATCGTGTATGGTTGTC 59.852 38.462 0.00 0.00 0.00 3.18
277 278 5.998981 TCCAAAGTAAATCGTGTATGGTTGT 59.001 36.000 0.00 0.00 0.00 3.32
278 279 6.489127 TCCAAAGTAAATCGTGTATGGTTG 57.511 37.500 0.00 0.00 0.00 3.77
279 280 7.065803 CAGATCCAAAGTAAATCGTGTATGGTT 59.934 37.037 0.00 0.00 0.00 3.67
280 281 6.538742 CAGATCCAAAGTAAATCGTGTATGGT 59.461 38.462 0.00 0.00 0.00 3.55
281 282 6.017934 CCAGATCCAAAGTAAATCGTGTATGG 60.018 42.308 0.00 0.00 0.00 2.74
282 283 6.017934 CCCAGATCCAAAGTAAATCGTGTATG 60.018 42.308 0.00 0.00 0.00 2.39
283 284 6.055588 CCCAGATCCAAAGTAAATCGTGTAT 58.944 40.000 0.00 0.00 0.00 2.29
284 285 5.188163 TCCCAGATCCAAAGTAAATCGTGTA 59.812 40.000 0.00 0.00 0.00 2.90
285 286 4.019681 TCCCAGATCCAAAGTAAATCGTGT 60.020 41.667 0.00 0.00 0.00 4.49
286 287 4.513442 TCCCAGATCCAAAGTAAATCGTG 58.487 43.478 0.00 0.00 0.00 4.35
287 288 4.225267 ACTCCCAGATCCAAAGTAAATCGT 59.775 41.667 0.00 0.00 0.00 3.73
288 289 4.770795 ACTCCCAGATCCAAAGTAAATCG 58.229 43.478 0.00 0.00 0.00 3.34
289 290 6.650120 TGTACTCCCAGATCCAAAGTAAATC 58.350 40.000 0.00 0.00 0.00 2.17
290 291 6.636454 TGTACTCCCAGATCCAAAGTAAAT 57.364 37.500 0.00 0.00 0.00 1.40
291 292 6.271391 TCTTGTACTCCCAGATCCAAAGTAAA 59.729 38.462 0.00 0.00 0.00 2.01
292 293 5.783360 TCTTGTACTCCCAGATCCAAAGTAA 59.217 40.000 0.00 0.00 0.00 2.24
293 294 5.338632 TCTTGTACTCCCAGATCCAAAGTA 58.661 41.667 0.00 0.00 0.00 2.24
294 295 4.168101 TCTTGTACTCCCAGATCCAAAGT 58.832 43.478 0.00 0.00 0.00 2.66
295 296 4.223923 ACTCTTGTACTCCCAGATCCAAAG 59.776 45.833 0.00 0.00 0.00 2.77
296 297 4.168101 ACTCTTGTACTCCCAGATCCAAA 58.832 43.478 0.00 0.00 0.00 3.28
297 298 3.791320 ACTCTTGTACTCCCAGATCCAA 58.209 45.455 0.00 0.00 0.00 3.53
298 299 3.474798 ACTCTTGTACTCCCAGATCCA 57.525 47.619 0.00 0.00 0.00 3.41
299 300 3.769844 TCAACTCTTGTACTCCCAGATCC 59.230 47.826 0.00 0.00 0.00 3.36
300 301 4.464597 ACTCAACTCTTGTACTCCCAGATC 59.535 45.833 0.00 0.00 0.00 2.75
301 302 4.421131 ACTCAACTCTTGTACTCCCAGAT 58.579 43.478 0.00 0.00 0.00 2.90
302 303 3.845860 ACTCAACTCTTGTACTCCCAGA 58.154 45.455 0.00 0.00 0.00 3.86
303 304 4.039245 TCAACTCAACTCTTGTACTCCCAG 59.961 45.833 0.00 0.00 0.00 4.45
304 305 3.964688 TCAACTCAACTCTTGTACTCCCA 59.035 43.478 0.00 0.00 0.00 4.37
305 306 4.602340 TCAACTCAACTCTTGTACTCCC 57.398 45.455 0.00 0.00 0.00 4.30
306 307 5.784177 TCATCAACTCAACTCTTGTACTCC 58.216 41.667 0.00 0.00 0.00 3.85
307 308 7.715265 TTTCATCAACTCAACTCTTGTACTC 57.285 36.000 0.00 0.00 0.00 2.59
308 309 8.506168 TTTTTCATCAACTCAACTCTTGTACT 57.494 30.769 0.00 0.00 0.00 2.73
309 310 9.736023 AATTTTTCATCAACTCAACTCTTGTAC 57.264 29.630 0.00 0.00 0.00 2.90
311 312 9.956720 CTAATTTTTCATCAACTCAACTCTTGT 57.043 29.630 0.00 0.00 0.00 3.16
312 313 9.403110 CCTAATTTTTCATCAACTCAACTCTTG 57.597 33.333 0.00 0.00 0.00 3.02
313 314 8.579863 CCCTAATTTTTCATCAACTCAACTCTT 58.420 33.333 0.00 0.00 0.00 2.85
314 315 7.725844 ACCCTAATTTTTCATCAACTCAACTCT 59.274 33.333 0.00 0.00 0.00 3.24
315 316 7.886338 ACCCTAATTTTTCATCAACTCAACTC 58.114 34.615 0.00 0.00 0.00 3.01
316 317 7.839680 ACCCTAATTTTTCATCAACTCAACT 57.160 32.000 0.00 0.00 0.00 3.16
317 318 7.598869 GGAACCCTAATTTTTCATCAACTCAAC 59.401 37.037 0.00 0.00 0.00 3.18
318 319 7.523052 CGGAACCCTAATTTTTCATCAACTCAA 60.523 37.037 0.00 0.00 0.00 3.02
319 320 6.072175 CGGAACCCTAATTTTTCATCAACTCA 60.072 38.462 0.00 0.00 0.00 3.41
320 321 6.072119 ACGGAACCCTAATTTTTCATCAACTC 60.072 38.462 0.00 0.00 0.00 3.01
321 322 5.773176 ACGGAACCCTAATTTTTCATCAACT 59.227 36.000 0.00 0.00 0.00 3.16
322 323 6.020971 ACGGAACCCTAATTTTTCATCAAC 57.979 37.500 0.00 0.00 0.00 3.18
323 324 6.658188 AACGGAACCCTAATTTTTCATCAA 57.342 33.333 0.00 0.00 0.00 2.57
324 325 6.658188 AAACGGAACCCTAATTTTTCATCA 57.342 33.333 0.00 0.00 0.00 3.07
327 328 8.192110 GCATATAAACGGAACCCTAATTTTTCA 58.808 33.333 0.00 0.00 0.00 2.69
328 329 8.410912 AGCATATAAACGGAACCCTAATTTTTC 58.589 33.333 0.00 0.00 0.00 2.29
329 330 8.194769 CAGCATATAAACGGAACCCTAATTTTT 58.805 33.333 0.00 0.00 0.00 1.94
330 331 7.683463 GCAGCATATAAACGGAACCCTAATTTT 60.683 37.037 0.00 0.00 0.00 1.82
331 332 6.238925 GCAGCATATAAACGGAACCCTAATTT 60.239 38.462 0.00 0.00 0.00 1.82
332 333 5.240844 GCAGCATATAAACGGAACCCTAATT 59.759 40.000 0.00 0.00 0.00 1.40
333 334 4.760204 GCAGCATATAAACGGAACCCTAAT 59.240 41.667 0.00 0.00 0.00 1.73
334 335 4.131596 GCAGCATATAAACGGAACCCTAA 58.868 43.478 0.00 0.00 0.00 2.69
335 336 3.495453 GGCAGCATATAAACGGAACCCTA 60.495 47.826 0.00 0.00 0.00 3.53
336 337 2.572290 GCAGCATATAAACGGAACCCT 58.428 47.619 0.00 0.00 0.00 4.34
337 338 1.607148 GGCAGCATATAAACGGAACCC 59.393 52.381 0.00 0.00 0.00 4.11
338 339 1.263217 CGGCAGCATATAAACGGAACC 59.737 52.381 0.00 0.00 0.00 3.62
339 340 2.033151 GTCGGCAGCATATAAACGGAAC 60.033 50.000 0.00 0.00 0.00 3.62
340 341 2.206750 GTCGGCAGCATATAAACGGAA 58.793 47.619 0.00 0.00 0.00 4.30
341 342 1.137282 TGTCGGCAGCATATAAACGGA 59.863 47.619 0.00 0.00 0.00 4.69
342 343 1.577468 TGTCGGCAGCATATAAACGG 58.423 50.000 0.00 0.00 0.00 4.44
343 344 3.878086 AATGTCGGCAGCATATAAACG 57.122 42.857 0.00 0.00 0.00 3.60
344 345 5.682862 CAGAAAATGTCGGCAGCATATAAAC 59.317 40.000 0.00 0.00 0.00 2.01
345 346 5.733091 GCAGAAAATGTCGGCAGCATATAAA 60.733 40.000 0.00 0.00 45.76 1.40
346 347 4.261155 GCAGAAAATGTCGGCAGCATATAA 60.261 41.667 0.00 0.00 45.76 0.98
347 348 3.250762 GCAGAAAATGTCGGCAGCATATA 59.749 43.478 0.00 0.00 45.76 0.86
348 349 2.033801 GCAGAAAATGTCGGCAGCATAT 59.966 45.455 0.00 0.00 45.76 1.78
349 350 1.401552 GCAGAAAATGTCGGCAGCATA 59.598 47.619 0.00 0.00 45.76 3.14
350 351 0.171903 GCAGAAAATGTCGGCAGCAT 59.828 50.000 0.00 0.00 45.76 3.79
351 352 1.580942 GCAGAAAATGTCGGCAGCA 59.419 52.632 0.00 0.00 45.76 4.41
352 353 4.465413 GCAGAAAATGTCGGCAGC 57.535 55.556 0.00 0.00 45.76 5.25
355 356 2.032178 GTCCATAGCAGAAAATGTCGGC 59.968 50.000 0.00 0.00 46.73 5.54
356 357 3.270027 TGTCCATAGCAGAAAATGTCGG 58.730 45.455 0.00 0.00 0.00 4.79
357 358 4.260907 CCATGTCCATAGCAGAAAATGTCG 60.261 45.833 0.00 0.00 0.00 4.35
358 359 4.641989 ACCATGTCCATAGCAGAAAATGTC 59.358 41.667 0.00 0.00 0.00 3.06
359 360 4.603131 ACCATGTCCATAGCAGAAAATGT 58.397 39.130 0.00 0.00 0.00 2.71
360 361 5.587388 AACCATGTCCATAGCAGAAAATG 57.413 39.130 0.00 0.00 0.00 2.32
361 362 5.163622 CGAAACCATGTCCATAGCAGAAAAT 60.164 40.000 0.00 0.00 0.00 1.82
362 363 4.155826 CGAAACCATGTCCATAGCAGAAAA 59.844 41.667 0.00 0.00 0.00 2.29
363 364 3.689161 CGAAACCATGTCCATAGCAGAAA 59.311 43.478 0.00 0.00 0.00 2.52
364 365 3.270027 CGAAACCATGTCCATAGCAGAA 58.730 45.455 0.00 0.00 0.00 3.02
365 366 2.236146 ACGAAACCATGTCCATAGCAGA 59.764 45.455 0.00 0.00 0.00 4.26
366 367 2.609459 GACGAAACCATGTCCATAGCAG 59.391 50.000 0.00 0.00 0.00 4.24
367 368 2.627945 GACGAAACCATGTCCATAGCA 58.372 47.619 0.00 0.00 0.00 3.49
368 369 1.593006 CGACGAAACCATGTCCATAGC 59.407 52.381 0.00 0.00 0.00 2.97
369 370 2.201732 CCGACGAAACCATGTCCATAG 58.798 52.381 0.00 0.00 0.00 2.23
370 371 1.741055 GCCGACGAAACCATGTCCATA 60.741 52.381 0.00 0.00 0.00 2.74
371 372 1.024579 GCCGACGAAACCATGTCCAT 61.025 55.000 0.00 0.00 0.00 3.41
372 373 1.669760 GCCGACGAAACCATGTCCA 60.670 57.895 0.00 0.00 0.00 4.02
373 374 2.736682 CGCCGACGAAACCATGTCC 61.737 63.158 0.00 0.00 43.93 4.02
374 375 2.025418 ACGCCGACGAAACCATGTC 61.025 57.895 0.00 0.00 43.93 3.06
375 376 2.029964 ACGCCGACGAAACCATGT 59.970 55.556 0.00 0.00 43.93 3.21
376 377 2.222953 GACACGCCGACGAAACCATG 62.223 60.000 0.00 0.00 43.93 3.66
377 378 2.025418 GACACGCCGACGAAACCAT 61.025 57.895 0.00 0.00 43.93 3.55
378 379 2.659244 GACACGCCGACGAAACCA 60.659 61.111 0.00 0.00 43.93 3.67
379 380 1.764180 TTTGACACGCCGACGAAACC 61.764 55.000 0.00 0.00 43.93 3.27
380 381 0.233848 ATTTGACACGCCGACGAAAC 59.766 50.000 0.00 0.00 43.93 2.78
381 382 0.509499 GATTTGACACGCCGACGAAA 59.491 50.000 0.00 0.00 43.93 3.46
382 383 0.319211 AGATTTGACACGCCGACGAA 60.319 50.000 0.00 0.00 43.93 3.85
383 384 0.319211 AAGATTTGACACGCCGACGA 60.319 50.000 0.00 0.00 43.93 4.20
384 385 1.721489 CAAAGATTTGACACGCCGACG 60.721 52.381 0.00 0.00 42.20 5.12
385 386 1.263217 ACAAAGATTTGACACGCCGAC 59.737 47.619 12.07 0.00 40.55 4.79
386 387 1.588674 ACAAAGATTTGACACGCCGA 58.411 45.000 12.07 0.00 40.55 5.54
387 388 3.416277 CATACAAAGATTTGACACGCCG 58.584 45.455 12.07 0.00 40.55 6.46
388 389 3.171277 GCATACAAAGATTTGACACGCC 58.829 45.455 12.07 0.00 40.55 5.68
389 390 3.820689 TGCATACAAAGATTTGACACGC 58.179 40.909 12.07 8.86 40.55 5.34
390 391 5.451908 AGTTGCATACAAAGATTTGACACG 58.548 37.500 12.07 0.00 40.55 4.49
391 392 6.672147 AGAGTTGCATACAAAGATTTGACAC 58.328 36.000 12.07 0.00 40.55 3.67
392 393 6.072508 GGAGAGTTGCATACAAAGATTTGACA 60.073 38.462 12.07 2.54 40.55 3.58
393 394 6.150140 AGGAGAGTTGCATACAAAGATTTGAC 59.850 38.462 12.07 0.00 40.55 3.18
394 395 6.240894 AGGAGAGTTGCATACAAAGATTTGA 58.759 36.000 12.07 0.00 40.55 2.69
395 396 6.506500 AGGAGAGTTGCATACAAAGATTTG 57.493 37.500 3.79 3.79 43.62 2.32
396 397 9.905713 TTATAGGAGAGTTGCATACAAAGATTT 57.094 29.630 0.00 0.00 37.58 2.17
397 398 9.331282 GTTATAGGAGAGTTGCATACAAAGATT 57.669 33.333 0.00 0.00 37.58 2.40
398 399 7.934120 GGTTATAGGAGAGTTGCATACAAAGAT 59.066 37.037 0.00 0.00 37.58 2.40
399 400 7.272978 GGTTATAGGAGAGTTGCATACAAAGA 58.727 38.462 0.00 0.00 37.58 2.52
400 401 6.201044 CGGTTATAGGAGAGTTGCATACAAAG 59.799 42.308 0.00 0.00 37.58 2.77
401 402 6.046593 CGGTTATAGGAGAGTTGCATACAAA 58.953 40.000 0.00 0.00 37.58 2.83
402 403 5.452776 CCGGTTATAGGAGAGTTGCATACAA 60.453 44.000 0.00 0.00 0.00 2.41
403 404 4.038763 CCGGTTATAGGAGAGTTGCATACA 59.961 45.833 0.00 0.00 0.00 2.29
404 405 4.557205 CCGGTTATAGGAGAGTTGCATAC 58.443 47.826 0.00 0.00 0.00 2.39
405 406 3.006537 GCCGGTTATAGGAGAGTTGCATA 59.993 47.826 1.90 0.00 0.00 3.14
406 407 2.224305 GCCGGTTATAGGAGAGTTGCAT 60.224 50.000 1.90 0.00 0.00 3.96
407 408 1.138266 GCCGGTTATAGGAGAGTTGCA 59.862 52.381 1.90 0.00 0.00 4.08
408 409 1.138266 TGCCGGTTATAGGAGAGTTGC 59.862 52.381 1.90 0.00 0.00 4.17
409 410 3.393800 CATGCCGGTTATAGGAGAGTTG 58.606 50.000 1.90 0.00 0.00 3.16
410 411 2.368875 CCATGCCGGTTATAGGAGAGTT 59.631 50.000 1.90 0.00 0.00 3.01
411 412 1.971357 CCATGCCGGTTATAGGAGAGT 59.029 52.381 1.90 0.00 0.00 3.24
412 413 2.751166 CCATGCCGGTTATAGGAGAG 57.249 55.000 1.90 0.00 0.00 3.20
423 424 1.427819 GCGAAACTAACCATGCCGG 59.572 57.895 0.00 0.00 42.50 6.13
424 425 1.060308 CGCGAAACTAACCATGCCG 59.940 57.895 0.00 0.00 0.00 5.69
425 426 1.003866 GATCGCGAAACTAACCATGCC 60.004 52.381 15.24 0.00 0.00 4.40
426 427 1.933853 AGATCGCGAAACTAACCATGC 59.066 47.619 15.24 0.00 0.00 4.06
427 428 3.186909 TGAGATCGCGAAACTAACCATG 58.813 45.455 15.24 0.00 0.00 3.66
428 429 3.520290 TGAGATCGCGAAACTAACCAT 57.480 42.857 15.24 0.00 0.00 3.55
429 430 3.520290 ATGAGATCGCGAAACTAACCA 57.480 42.857 15.24 10.52 0.00 3.67
430 431 3.863424 TGAATGAGATCGCGAAACTAACC 59.137 43.478 15.24 5.01 0.00 2.85
431 432 5.062308 AGTTGAATGAGATCGCGAAACTAAC 59.938 40.000 15.24 15.16 0.00 2.34
432 433 5.168569 AGTTGAATGAGATCGCGAAACTAA 58.831 37.500 15.24 9.66 0.00 2.24
433 434 4.744570 AGTTGAATGAGATCGCGAAACTA 58.255 39.130 15.24 0.07 0.00 2.24
434 435 3.589988 AGTTGAATGAGATCGCGAAACT 58.410 40.909 15.24 16.19 0.00 2.66
435 436 3.999229 AGTTGAATGAGATCGCGAAAC 57.001 42.857 15.24 10.59 0.00 2.78
436 437 4.378356 CCAAAGTTGAATGAGATCGCGAAA 60.378 41.667 15.24 0.00 0.00 3.46
437 438 3.125146 CCAAAGTTGAATGAGATCGCGAA 59.875 43.478 15.24 0.00 0.00 4.70
438 439 2.672874 CCAAAGTTGAATGAGATCGCGA 59.327 45.455 13.09 13.09 0.00 5.87
439 440 2.789092 GCCAAAGTTGAATGAGATCGCG 60.789 50.000 0.00 0.00 0.00 5.87
440 441 2.421424 AGCCAAAGTTGAATGAGATCGC 59.579 45.455 0.00 0.00 0.00 4.58
441 442 3.242220 CGAGCCAAAGTTGAATGAGATCG 60.242 47.826 0.00 0.00 0.00 3.69
442 443 3.486542 GCGAGCCAAAGTTGAATGAGATC 60.487 47.826 0.00 0.00 0.00 2.75
443 444 2.421424 GCGAGCCAAAGTTGAATGAGAT 59.579 45.455 0.00 0.00 0.00 2.75
444 445 1.806542 GCGAGCCAAAGTTGAATGAGA 59.193 47.619 0.00 0.00 0.00 3.27
445 446 1.135575 GGCGAGCCAAAGTTGAATGAG 60.136 52.381 9.58 0.00 35.81 2.90
446 447 0.881118 GGCGAGCCAAAGTTGAATGA 59.119 50.000 9.58 0.00 35.81 2.57
447 448 0.454957 CGGCGAGCCAAAGTTGAATG 60.455 55.000 15.03 0.00 35.37 2.67
448 449 0.605319 TCGGCGAGCCAAAGTTGAAT 60.605 50.000 15.03 0.00 35.37 2.57
449 450 1.227704 TCGGCGAGCCAAAGTTGAA 60.228 52.632 15.03 0.00 35.37 2.69
450 451 1.959226 GTCGGCGAGCCAAAGTTGA 60.959 57.895 11.20 0.00 35.37 3.18
451 452 2.175184 CTGTCGGCGAGCCAAAGTTG 62.175 60.000 11.20 0.00 35.37 3.16
452 453 1.961277 CTGTCGGCGAGCCAAAGTT 60.961 57.895 11.20 0.00 35.37 2.66
453 454 2.357517 CTGTCGGCGAGCCAAAGT 60.358 61.111 11.20 0.00 35.37 2.66
454 455 1.961277 AACTGTCGGCGAGCCAAAG 60.961 57.895 11.20 10.04 35.37 2.77
455 456 2.110213 AACTGTCGGCGAGCCAAA 59.890 55.556 11.20 0.00 35.37 3.28
456 457 2.664851 CAACTGTCGGCGAGCCAA 60.665 61.111 11.20 0.00 35.37 4.52
459 460 3.782244 CTGCAACTGTCGGCGAGC 61.782 66.667 11.20 10.88 0.00 5.03
460 461 3.782244 GCTGCAACTGTCGGCGAG 61.782 66.667 11.20 1.19 0.00 5.03
461 462 4.600576 TGCTGCAACTGTCGGCGA 62.601 61.111 4.99 4.99 38.62 5.54
462 463 4.081030 CTGCTGCAACTGTCGGCG 62.081 66.667 3.02 0.00 38.62 6.46
463 464 4.395583 GCTGCTGCAACTGTCGGC 62.396 66.667 11.11 0.00 39.41 5.54
464 465 3.730761 GGCTGCTGCAACTGTCGG 61.731 66.667 17.89 0.00 41.91 4.79
465 466 2.667536 AGGCTGCTGCAACTGTCG 60.668 61.111 17.89 0.00 41.91 4.35
466 467 2.675056 CGAGGCTGCTGCAACTGTC 61.675 63.158 17.89 4.09 41.91 3.51
467 468 2.667536 CGAGGCTGCTGCAACTGT 60.668 61.111 17.89 0.00 41.91 3.55
468 469 2.667536 ACGAGGCTGCTGCAACTG 60.668 61.111 17.89 6.38 41.91 3.16
469 470 2.358003 GACGAGGCTGCTGCAACT 60.358 61.111 17.89 4.90 41.91 3.16
470 471 3.426568 GGACGAGGCTGCTGCAAC 61.427 66.667 17.89 9.22 41.91 4.17
474 475 4.803426 GGACGGACGAGGCTGCTG 62.803 72.222 0.00 0.00 0.00 4.41
477 478 3.382832 AAGGGACGGACGAGGCTG 61.383 66.667 0.00 0.00 0.00 4.85
478 479 3.382832 CAAGGGACGGACGAGGCT 61.383 66.667 0.00 0.00 0.00 4.58
479 480 4.452733 CCAAGGGACGGACGAGGC 62.453 72.222 0.00 0.00 0.00 4.70
480 481 3.771160 CCCAAGGGACGGACGAGG 61.771 72.222 0.00 0.00 37.50 4.63
481 482 2.995574 ACCCAAGGGACGGACGAG 60.996 66.667 13.15 0.00 38.96 4.18
482 483 3.307906 CACCCAAGGGACGGACGA 61.308 66.667 13.15 0.00 38.96 4.20
483 484 3.307906 TCACCCAAGGGACGGACG 61.308 66.667 13.15 0.00 38.96 4.79
514 515 1.375396 CACGGAATCGCCAGACCAA 60.375 57.895 0.00 0.00 40.63 3.67
593 595 0.384477 GATGCTACTCGCGAGTACCG 60.384 60.000 37.98 30.38 42.54 4.02
597 599 2.026522 GAGGATGCTACTCGCGAGT 58.973 57.895 40.17 40.17 45.02 4.18
604 606 2.415010 CAGCGCGAGGATGCTACT 59.585 61.111 12.10 0.00 40.03 2.57
612 620 2.960659 CAGATCAGCAGCGCGAGG 60.961 66.667 12.10 0.41 0.00 4.63
649 657 1.229400 AAGGCCTAAGGGTGGACGA 60.229 57.895 5.16 0.00 37.76 4.20
651 659 1.221021 CGAAGGCCTAAGGGTGGAC 59.779 63.158 5.16 0.00 34.45 4.02
717 725 0.471211 AGACCAGAACCAAGGACCGA 60.471 55.000 0.00 0.00 0.00 4.69
718 726 0.396811 AAGACCAGAACCAAGGACCG 59.603 55.000 0.00 0.00 0.00 4.79
719 727 1.545651 CCAAGACCAGAACCAAGGACC 60.546 57.143 0.00 0.00 0.00 4.46
720 728 1.897560 CCAAGACCAGAACCAAGGAC 58.102 55.000 0.00 0.00 0.00 3.85
721 729 0.110486 GCCAAGACCAGAACCAAGGA 59.890 55.000 0.00 0.00 0.00 3.36
722 730 0.111253 AGCCAAGACCAGAACCAAGG 59.889 55.000 0.00 0.00 0.00 3.61
723 731 1.242076 CAGCCAAGACCAGAACCAAG 58.758 55.000 0.00 0.00 0.00 3.61
724 732 0.550914 ACAGCCAAGACCAGAACCAA 59.449 50.000 0.00 0.00 0.00 3.67
725 733 0.179020 CACAGCCAAGACCAGAACCA 60.179 55.000 0.00 0.00 0.00 3.67
726 734 0.108585 TCACAGCCAAGACCAGAACC 59.891 55.000 0.00 0.00 0.00 3.62
727 735 2.191128 ATCACAGCCAAGACCAGAAC 57.809 50.000 0.00 0.00 0.00 3.01
728 736 2.553028 GGAATCACAGCCAAGACCAGAA 60.553 50.000 0.00 0.00 0.00 3.02
729 737 1.003580 GGAATCACAGCCAAGACCAGA 59.996 52.381 0.00 0.00 0.00 3.86
730 738 1.004044 AGGAATCACAGCCAAGACCAG 59.996 52.381 0.00 0.00 0.00 4.00
731 739 1.067295 AGGAATCACAGCCAAGACCA 58.933 50.000 0.00 0.00 0.00 4.02
778 799 4.313020 AACTCTTCATCAAGCCTTCCAT 57.687 40.909 0.00 0.00 0.00 3.41
786 807 7.011763 TCAGACAGTTTCAAACTCTTCATCAAG 59.988 37.037 0.00 0.00 40.46 3.02
855 876 0.744771 GTTCCACGATCCCTGCCTTC 60.745 60.000 0.00 0.00 0.00 3.46
861 882 3.000819 TGCGGTTCCACGATCCCT 61.001 61.111 0.00 0.00 35.47 4.20
888 909 5.039480 CTGGTTTATCAGACAGCAACTTG 57.961 43.478 0.00 0.00 36.93 3.16
915 936 3.785486 CGAGTTGATCATACCTTCAGCA 58.215 45.455 0.00 0.00 0.00 4.41
936 957 0.105778 GACACCAGATCCTGCCTAGC 59.894 60.000 0.00 0.00 0.00 3.42
939 960 1.081833 AGGACACCAGATCCTGCCT 59.918 57.895 0.00 0.00 45.29 4.75
957 978 5.064452 GTCCTTACAATCGAGACGTCTTAGA 59.936 44.000 21.08 21.31 0.00 2.10
960 981 3.119566 GGTCCTTACAATCGAGACGTCTT 60.120 47.826 21.08 4.85 0.00 3.01
964 985 2.479730 CCAGGTCCTTACAATCGAGACG 60.480 54.545 0.00 0.00 0.00 4.18
969 990 0.810031 CGCCCAGGTCCTTACAATCG 60.810 60.000 0.00 0.00 0.00 3.34
994 1015 4.699637 TGGTAGAACGTGAACATGAAAGT 58.300 39.130 0.00 0.00 0.00 2.66
995 1016 4.377431 GCTGGTAGAACGTGAACATGAAAG 60.377 45.833 0.00 0.00 0.00 2.62
1053 1074 2.548057 GAGCGAGTTGTTGAACATCCAA 59.452 45.455 0.00 0.00 34.17 3.53
1071 1092 1.003233 GTCTTCCACCACCAGGAGC 60.003 63.158 0.00 0.00 36.33 4.70
1086 1107 2.564947 ACTCTTCGCTGGATCAAAGTCT 59.435 45.455 0.00 0.00 0.00 3.24
1089 1110 3.190874 GGTACTCTTCGCTGGATCAAAG 58.809 50.000 0.00 0.00 0.00 2.77
1098 1119 6.377712 ACTTATAGTCTTTGGTACTCTTCGCT 59.622 38.462 0.00 0.00 0.00 4.93
1164 1185 1.207089 TCTCGACACATCATCCCCAAC 59.793 52.381 0.00 0.00 0.00 3.77
1197 1218 3.308688 CCTCCTCCACAATGTCTCCAATT 60.309 47.826 0.00 0.00 0.00 2.32
1214 1235 0.644937 ATTGACCTCTAGGGCCTCCT 59.355 55.000 10.74 0.00 44.80 3.69
1224 1245 1.606531 GGAGCCTGCATTGACCTCT 59.393 57.895 0.00 0.00 0.00 3.69
1231 1252 1.713005 ATCCCATCGGAGCCTGCATT 61.713 55.000 0.00 0.00 43.12 3.56
1324 1345 2.352032 CCTCGCCGTCCTCCTTCTT 61.352 63.158 0.00 0.00 0.00 2.52
1339 1360 2.408271 TCATCATGGTCTTGTGCCTC 57.592 50.000 0.00 0.00 0.00 4.70
1361 1382 3.268072 CCCTTCCTTCTCCCTCTCATTTT 59.732 47.826 0.00 0.00 0.00 1.82
1375 1396 1.617839 CCTCCTCCTGCCCTTCCTT 60.618 63.158 0.00 0.00 0.00 3.36
1381 1402 1.074566 CCATTTATCCTCCTCCTGCCC 59.925 57.143 0.00 0.00 0.00 5.36
1442 1463 4.492494 ACATGATCAAGCATACCACAGA 57.508 40.909 0.00 0.00 0.00 3.41
1501 1523 0.105778 CCACGGGCCAAATTGTTTGT 59.894 50.000 4.39 0.00 38.98 2.83
1508 1530 0.684153 CCTTCATCCACGGGCCAAAT 60.684 55.000 4.39 0.00 0.00 2.32
1535 1557 3.244805 TGGTCTCACTCGAACTTCTAGGA 60.245 47.826 0.00 0.00 0.00 2.94
1544 1566 0.884514 CTCTGCTGGTCTCACTCGAA 59.115 55.000 0.00 0.00 0.00 3.71
1568 1590 2.593978 CCCCTGCCATCACTCCAG 59.406 66.667 0.00 0.00 0.00 3.86
1589 1611 0.247736 CACTGCTTCGCCCTTCTAGT 59.752 55.000 0.00 0.00 0.00 2.57
1652 1674 1.005630 GCTGTCACTGTCGCTTCCT 60.006 57.895 0.00 0.00 0.00 3.36
1667 1689 1.449246 CTTCTCCTTCCGCCAGCTG 60.449 63.158 6.78 6.78 0.00 4.24
1690 1712 4.947147 TCACCTGTTGCCCCGCAC 62.947 66.667 0.00 0.00 38.71 5.34
1700 1722 0.469331 TCTCCAACTCCGTCACCTGT 60.469 55.000 0.00 0.00 0.00 4.00
1704 1726 0.666577 CGGTTCTCCAACTCCGTCAC 60.667 60.000 0.00 0.00 38.45 3.67
1727 1749 1.055849 TAGGGCTTGTCACTTCAGCA 58.944 50.000 0.00 0.00 0.00 4.41
1754 1776 1.079323 ACTTGCATGGGATCCCCTTTT 59.921 47.619 28.58 7.57 45.70 2.27
1757 1779 0.032813 CAACTTGCATGGGATCCCCT 60.033 55.000 28.58 16.34 45.70 4.79
1783 1805 5.422012 ACAACCTCTTGTCCAAATTTGACTT 59.578 36.000 19.86 3.19 35.57 3.01
1792 1814 2.422803 CCCTTCACAACCTCTTGTCCAA 60.423 50.000 0.00 0.00 38.66 3.53
1807 1829 1.689813 TCGTAGCTGTTGTTCCCTTCA 59.310 47.619 0.00 0.00 0.00 3.02
1808 1830 2.450609 TCGTAGCTGTTGTTCCCTTC 57.549 50.000 0.00 0.00 0.00 3.46
1824 1846 4.865365 GCTCTCATAAGTTAGTTGCTTCGT 59.135 41.667 0.00 0.00 0.00 3.85
1825 1847 4.864806 TGCTCTCATAAGTTAGTTGCTTCG 59.135 41.667 0.00 0.00 0.00 3.79
1832 1854 4.340950 GGCTCTCTGCTCTCATAAGTTAGT 59.659 45.833 0.00 0.00 42.39 2.24
1847 1869 0.823460 GTTCTCCCTCAGGCTCTCTG 59.177 60.000 0.00 0.00 44.68 3.35
1854 1876 2.092914 GGTATTGGTGTTCTCCCTCAGG 60.093 54.545 0.00 0.00 0.00 3.86
1871 1893 2.433604 CACACTGCTCTCATCCTGGTAT 59.566 50.000 0.00 0.00 0.00 2.73
1879 1901 2.617276 CCCACAATCACACTGCTCTCAT 60.617 50.000 0.00 0.00 0.00 2.90
1880 1902 1.271001 CCCACAATCACACTGCTCTCA 60.271 52.381 0.00 0.00 0.00 3.27
1906 1928 2.034066 GCAGCACTTGGGCCTGTA 59.966 61.111 4.53 0.00 0.00 2.74
1918 1940 4.162888 TCTCTAGATCTTTGGAATGCAGCA 59.837 41.667 0.00 0.00 0.00 4.41
1966 1988 0.616395 TTCCACGACATCCTGCCCTA 60.616 55.000 0.00 0.00 0.00 3.53
1991 2013 1.360852 AGATCACCTCCCTCACAGACT 59.639 52.381 0.00 0.00 0.00 3.24
2039 2061 0.695347 ACCTGGAGCCTTCCTTCTTG 59.305 55.000 0.00 0.00 44.36 3.02
2214 2236 0.550914 TGTTCTGACAGCCCCACTTT 59.449 50.000 0.00 0.00 0.00 2.66
2248 2270 4.092091 CAGTTCCAAGCTACGACTTTCATC 59.908 45.833 0.00 0.00 0.00 2.92
2257 2279 1.374252 ACGGCAGTTCCAAGCTACG 60.374 57.895 0.00 0.00 34.01 3.51
2292 2314 1.406069 CCAGAAGGCTACGAACTGCAT 60.406 52.381 0.00 0.00 0.00 3.96
2461 2483 3.547737 TCCACCCCTCTCCCCCAA 61.548 66.667 0.00 0.00 0.00 4.12
2465 2487 0.253020 TTAACCTCCACCCCTCTCCC 60.253 60.000 0.00 0.00 0.00 4.30
2501 2523 3.071457 ACCTCCGCATCAATGTGATATCA 59.929 43.478 0.00 0.00 40.61 2.15


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.