>input_sequence_77433
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------------------------------------------------------------ATGTTCACGTTCTACCAGCA
TTCTGGGAAGAGGAAAGCCCTTGATGAGGGCCCTTGGATGTTCAACAACTCGCTCCTGGTGGTGGAAGACTTTGATCCAG
CGAAGAGTACCAAAGACTATAAGTTCATAACAGTCCCGATCTGGGTGCGGGTCTTTGATCTTCCGTTGGGGATGATGTGT
CGAGAGGCGGGACTAGCAATTGGAGACATTGTGGAGGAGGCCCTAGAGGTCAATGCAGGCTCCGATGGGATGGCGGTTGG
CAAGTTCCTGAGGGTGAAAATTCGCATGGACATCACAAAACCCATTATGCGTGGTTTTGTCCTGAAGAAGGAGGACGGCG
AGGCACAAGACCATGATGAAAAAAATGAGAGGGAGAAGGAAGGGCAGGAGGAGGATAAATGGTGTAGATTTGAGTATGAA
TTTCTCCCAGATTTCTGTTACATCTGTGGTATGCTTGATCATGTAGACAAGGACTGCTCCTATAAGCTAAAGAAGGGAGA
-AACAAACAATTTGGCCCGTGGATGA------------------------------------------------------
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>chr5B_1_TraesCS5B01G382500
CATATAGGGTTTTTACCGGATGATGTTTCCCAGGGCCCGAAGCTGTCTAAACTCCCGTCTTGTGGTGTGTCTCTTGATTC
CGCTCAACCCCTCTCAGGCTACCACATAGATGCGTTGGCCTCGCGACGAAGTCCTTGCACTAAGGACATCTGACGTGTTA
ATTCCACGACAGCTGGCGCCCACCATGGGGCCCGCGCACGATGGTGTTGAGTTCTTGGAGGGTTCCCCAAGGATCGAGAG
GCTCGTGATTGGCCGGATGAAGAAGAACCGGCACGAGACAACCATACACGATTTACTTTGGATCTGGGAGTACAAGAGTT
GAGTTGATGAAAAATTAGGGTTCCGTTTATATGCTGCCGACATTTTCTGCTATGGACATGGTTTCGTCGGCGTGTCAAAT
CTTTGTATGCAACTCTCCTATAACCGGCATGGTTAGTTTCGCGATCTCATTCAACTTTGGCTCGCCGACAGTTGCAGCAG
CCTCGTCCGTCCCTTGGGTGACGGTTAGGTTTCCTTGGTCTGGCGATTCCGTGGCGATCGCCTAGGGTTTACGTCTCT-T
CCGTCGCCGCCGCACCTTCCTCAGATCCTTTCTGCGGTACTCGCGAGTAGCA------TCCTCGCGCTGCTGATCTGCAC
CCCGCATCCTAACCCATCGTCCACCCTTAGGCCTTCGGTGTGTTGCTAGGGCGCACCGTCGTACACCACCCCTAACCCTA
GTTTTCGGTCCTTGGTTCTGGT-------------CTTGGCTGTGATTCCTGGTTTGGCTTTGGTTCTGATGGATCGTAT
GGAAGGCTTGATGAAGAGTTTGAAACTGTCTGATCTGGAGAGCAAGGGGAGGAAGATTGCATGGAGGGGAGGGGGGAAGG
CAGGGATCGTGGAACCGCAGGCCCTGGCCAAGTTGCTGTCTGATAAACCAGCCTATGCTGAAGGTATGATCAACTCGCTA
GGCAGGATCTGGTGTCCTCTAAGACGTCTCGATTGTAAGGACCTGGGCGACAATACTTTCATGTTCACGTTCTACCAGCA
TTCTGGGAAGAGGAAAGCCCTTGATGAGGGCCCTTGGATGTTCAACAACTCGCTCCTGGTGGTGGAAGACTTTGATCCAG
CGAAGAGTACCAAAGACTATAAGTTCATAACAGTCCCGATCTGGGTGCGGGTCTTTGATCTTCCGTTGGGGATGATGTGT
CGAGAGGCGGGACTAGCAATTGGAGACATTGTGGAGGAGGCCCTAGAGGTCAATGCAGGCTCCGATGGGATGGCGGTTGG
CAAGTTCCTGAGGGTGAAAATTCGCATGGACATCACAAAACCCATTATGCGTGGTTTTGTCCTGAAGAAGGAGGACGGCG
AGGCACAAGACCATGATGAAAAAAATGAGAGGGAGAAGGAAGGGCAGGAGGAGGATAAATGGTGTAGATTTGAGTATGAA
TTTCTCCCAGATTTCTGTTACATCTGTGGTATGCTTGATCATGTAGACAAGGACTGCTCCTATAAGCTAAAGAAGGGAGA
-AACAAACAATTTGGCCCGTGGATGAAGGCTTTCATTCCTAGAAGTTCGAGTGAGACCAGCAGAGGTAGCTGGAGTGATG
GCAGGGGCAAACTAGAAGGGCGAAGCAGTGGGGGTGGTAAAAGCCGTAGCTGGGGCCGCTCGGGGGGCCATTCAGGAAGC
GACAGTGACAGCTGGCGGAAGGAGAAGCCGGGTGCGGGGCAACAGGTGACGGAGTTGGAGAACCGCGATGCTGAAGTGAC
AAGCCCTATGAAGAAAAAAGGGGATCCCATGCAAGTTGAGGCTCAAGTCAAATTTGGACAAGAGGTTGTGAAGGGAACAA
CAGCTACGAAGCAACTAACTTATGAGAGCAGAGAGCCTGAGGGAGAACACCAATACCAGGATGAGAGCAGTGTGATTGTG
GGGGGCGTACAGGCCCAAGTGCTGCATTCCAAAGATCTAGAGAAGGGAAAGGGAAGCGCTGTATTGGTAGGGCAGGATGT
CGTGGAAGAATCAGTCTGTGAGGGAGGTGATCTGAACGGAGGCAAGGGGAATGGGGGCAACAAGAAGGAAGGCTCCAGGT
TCAGAAGGAAGGAGAGGAGGAAGGATATGGATAACAGTGCCCCTTTGGGTGTGACTCTCAGCACAAAGCGCGGGGGTGAG
GAGGTTGAGGGTGATGTGGACGTGACCAATGACGCTAAGAAACAAAAGACTGGGGAGAGCTCTCCCAACACTCCTAAAGT
GGGGCTGTCAGAACAGCCCTGCAGGCCGCGATGAAAGTCGTAGCTTGGAACTGCCGTGGGCTTGGGAACCCACATGCAGT
TCGTAGCCTTCTGGAGCTGCAGAAGGCGGAAGCTCCCGACATCCTCTTCCTCTCGGAGACTAAAATGACAGAGAGGGAGG
TGGATTTCTTGCGGTGGCGTCTGAATCTGGTGAACATGGTGGGAGTTGACTGCGTTGGTCGTAGTGGGGGGCTTGCTCTC
TTTTGGGGGAGAGGGGTGGAGGTTAACCTGAGATGGAAGGGGTGATATCACATTGATGCGGAGGTG
>chr6B_482
CTG-----------------------------------------------------------------------------
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----GTCCGTCCCTTGGGTGACGGTTAGGTTTCCCTGGTCTGGCGATTCCGTGGCGATCGCCTAGGGTTTACGTTTCTGC
CCGTCGCCGCCGCACCTTCCTCAGATCCCTTTGT-GGTGCTCGAGGGTAGCA------TTCTCGCGCCGCTGATCTGCAC
CCCGCATCCTAACCCACCCTCAACGCTCAGGCCTTCGGTGTGTTGCTAGGGCGCACCGTCGTACACCACCCCTAACCCTA
GTTTC--------------GGTTCTCGGTTCCGGTCTTGGCTGTGATTCCTGGTTTGGCTTTGGTTCTGATGGATCGTGT
GGAAGGTTTGATGAAGAGTTTGAAACGGTCTGATCTGGAGAGCAAGGGGAGGAAGATTGCATGGAGGGGAGGGGATAAGG
CTGTGATCGTGGAACCGCGGGCCCTAGCTAAGTTGCTGTCTGATAAACCAGCCTACGCTGAAGGTATGATCAACTCTTTG
GGCAAGATCTGGTGTCCACTGAGAGGTCTAGATTGTAAGGACCTGGGCGACAATGTTTTTATGTTCATGTTCTACCAGCA
TTCTGGCAAGAGGAAAGCCCTTGATGAGGGCCCATGGATGTTCAACAACTCTCTCCTGGTGGTGGAGGATTTTGATCCGG
CAAAGAGCACCAAAGACTATAAGTTCATGACAGTACCGATCTGGGTGCAGGTCTTTGATCTGCCCTTGGGGATGATGTGT
CGAGAGGCGGGACTAGCGATTGGAGACATTGTGGGGGAGGCCCTGGAGGTCGATGCAGGCTCCGATGGGATGGCGGTTGG
CAAGTTCCTGAGGGTGAAAATTCGCATGGACATCACTAAACCCATTATGCGTGGTTTTGTCCTGGAGAAGGAGGACGGCA
AGGCACAAGATCATGATGAAACAAATGAGAGGGAGCAGGAAAGGCAGGAGGAGGAGAGATGGTGTAGATTTGAATATGAA
TTTCTCCCAGATTTCTGTTACACCTGTGGTATGCTTGATCATGTGGACAAGGACTGCTCTTATAAGCTAAAGAAGGGAGA
GAGCAAACAGTTTGGCCCGTGGCTGAAGGCCTTCATCCCTAGAAGCTCGAGCGAGACCAGCAGAGGTAGTTGGAGTGATG
GCAGGGGCAAGCTAGAGGGTCGAAGTAGTGGGGGTGGCAAAAGTCGTAGATGGGGCCGCTCAGGGGGGCATTTGGGAAGC
GACAGTGATAGCTGGCGGAAGGACAAATCGGTTGCGGGGCACCAGTTGACGGAGTTGGAGAACTGCGAGGCTGAAGTGAC
GAGACCTATGAAGAAGAAGGGGGATCCCATGCAAGTTGAGGCTCCAGTCAAATCTGGACAAGAGGTTGCAAAGGGAACAA
CAGCTCTGAAGCATCTAACTTATGAGAGTAGAGAGTCTGAGGGAGAACACCAGTACCAGGGAGAGAGCAGTGCGATTGTG
GGGGGCGCACAGGCCCATGGGCTGCCATCTAAAGGTTCAGAGAAGGGGAA-GGAAGCGTTGTTTTGGCAGGGCAGGATGA
TGTGGAAGAATCGGTCCGGGAGGAAGGTGAACTGAGCGGAGGCAAGGGGAACGGGGGCAATAAGAAGGACGGCTCGAGGT
TCAGAAGGAAGGAGGGGAGGAAGGACATGGCCGACAGTGCCCCTTTGGGTGTGACTCTTAGTACAAAGCGCGGGGGTGAT
GAGGTTGAAGGTGATGTGGACGTAACCAATAACACTAAGAAACACAAGACTGGGGAGAGCTTTCCCAACACTACTGAAGC
GGGGCTGTCGGAACAGCCCTGCGGGCCGCAATGAAAATAGTAGCTTGGAACTGCCGTGGGCTTGGGAACCCACGTGCAGT
TCGTAGCCTTTTGGAGCTGCAGAAGGCGGAAGCTCCCAACATCCTCTTCCTCCCGGAGACTAAAATGACCGAGAGGGAGG
TGGATTTCTTGCGGTGGCGTCTGAATTTGGTGAACATGGTGGGAGTAGACTGCGTTGGTCGTAGTGGGGGGCTTGCCCTC
TTCTGGAGGAGAGGGGTGGAGGTTAACCTGAGATGGAAGGGGAGATATCACATTGATGCGAAGGTG
>chr2D_485
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----GTCCGTCCCTTGCGTGACGGTTAGGTTCT-CTGGTGTGGCGATTCCGTGGCGATCGCCTAGG--TTACGCCGCT-C
CCGTCGCCGCCGCACCTCTCACAGATCCCATTGA-GGTGCTCGAGGGTTTCCATTGCTTTCTCGCGCTGCCGATCTACAC
CCCGCATCCCAATCCACCC-CCACCCTCAGGCCTCCGGTGTGTTACTAGGGCGCGCCGTCGTACACCACCCCTAACCCTA
GTTTC--------------GGT-------------CTTGGCTGTCATTCCTAGTTTGGCTTTGTTTCTGATGGATCGTGT
GGAAGGTTTGATGAAGAGTTTGAAGTTGCCTGATCTGGAGAGTAAGGGGAGGAAGATTGCATGGACGGGAGGGGGTAAGG
CTGGGATCGTGGAACCGCAAGCCCTGGCTAAGCTGCTGTCAGATAAACCAGCCTACGCTGAAGGTATGATAAACTCTCTG
GGCAGGATCTGGTGTCCACTGAGAGGTCTAGATTGCAAAGATCTTTGAGACAATGTTTTCATGTTCACGTTCCACCAACA
TTCTGGGAAGAGGAAAGCCCTCGATGAGGGTCCATGGATGTTCAATAATCCCCTCCTGGTGGTGGAGGATTTTGATCCGG
CAAAGAGCACCAAGGACTATAAGTTTATGACAGTTCCGATCTGGGTACGTGTCTTTGATCTGCCTTTGGGAATGATGTGT
CGGGAGGCGGGGCTCGCGATTGGAGATATTGTGGGGGAGGCCTTGGAGGTCGATGCAGGCTCCGATGGGATGGCGGTTGG
CAAGTTCCTGAGGGTGAAAGTTCGCATAGACATCACTAAACCTATTATGCGACGTTTTGTTCTGGAAAAGGATGGCGGCA
AGGCACAAGAGAATGATGAAATAACTGAGAGGGAGCAGGAGAGGAAGGAGGAGGAGAAATGGTGCAGATTTGAGTATGAG
TTCCTCCCGGATTTCTGTTACACTTGTGGTATGCTTGATCATGTGGACAAAGAGTGCTCCTACAAGCTAAAGAAGGGAGA
GATCAAGCAGTTCGGTCCGTGGCTGAAGGCTTTCATCCCTAGAAGCTCGAGTGAGACTAGTAGAGGTAGTTGGAGTGATG
GCAGGGGCAAGCCGGAGGGTCGAAGCAGTGGGGGTGGCAAAAGCCGTAGCTGGGGGCACTCAGGGGGCCGTTCGGGAAGC
GATAGTGATAATTGGCGCAAGGACAAATCGGTGGTGGGGCACCAGTTGACAGAGTTGGAAAACCGCGAGGCTGAAGTGAC
GAGCCCTATGAAGAAGAAGGGTGATCCAATGCAAGTTGAGGCCCCAGCCAAATCTGGACGAGAGATTGCAAAGGGAACAG
TAGCTCTGAAGCATCTAACTTATGAGAGTAGAGGGTCTGTGGGAGAGCAAAAGCATCAGGGGGAGAGCAGTGTGATTGAG
GGGGT-GCACAGGCCCAAAGGTTGCCTCCTAAAGTTTCTGAGAAGGGGAAGGGGAGGAAGGAATTGACGGGGCAGGATGA
TGTTGCAGAACCGGTCCGGGAGGAAGGTGATTTCAACGGAGGCAAGGGGAATGGAGGCAATAAGAAGGAAGGCTCGAGGT
TTAGAAGGAAGGAGAGAAGGAAGGACATGGCTGATAGTGCTCCACTGGGTGTGATTCTGAGCACAAAGTGTAGGGGGG-T
GAGGTGGAAGGTGATGTGGACGTAACCAGTGACACTAAGAAGTACAAAACCGGGGAGAACATTCCCAACACTTGTGAAGT
GGGGCTGTCGGAACAGCCCTGCGGGTCGCAATGAAGATAATAGCTTGGAACTGTCGTGGGCTTAGGAACCCACGTGCAGT
TCGTAGCCTTCTGGAGCTGCAGAGGGCGGAAGCTCTCGATATCCTCTTCCCCTCGGAAACTAAAATGACTGAGAAGGAGG
TGGATTTCTTGCGGTGGCGTTTGAACTTGGTGCACATGGTGGGAGTAGACTGCGTTGGTCGTAGTGGGGGACTTGCCCTC
TTCTGGAGGAGAGGGGTGGAGGTTAACCTGAGATGGAAAGGGAGATATCACATTGATGCGGATGTG
>chrUn_1915
C-------------------------------------------------------------------------------
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-----------------AAGGCTGCATTCCAAAGATCTAGAGAAGGGAAAGGGAAGCGCTGCTTTGGGAGGGCAGGATGT
CATGGAAGAATCGGTGTGTGAGGGAGGCGATCTGACCGGAGGCAAGGGGAATGGGGGCAATAAGAAGGAAGGCTCCAGGT
TCAGAAGGAAGGAGAGGAGGAAGGATTTGGCTGACAGCACCCCTTTGGGTGTGATTCTCAGCACAAAGCGCGGGGGTGAG
GAGGGTGAGGGTGATGTGGACGTGACCAATGACGCTAAGAAGCAAAAGACTGGGGAGAGCTCTCCCACCACTCCTGAAGC
GGGGCTGTCGGAACAGCCCTGCAGGCCGCAATGAAAGTTATAGCTTGGAACTGCCGTGGGCTTGGGAACCCACGTGCAGT
TCGTAGCCTTCTGGAGCTGCAGAAGGCGGAAGCTCCCGACATCCTCTTCCTCTCGGAGACTAAAATGACAGAGAGGGAGG
TTGATTTCTTGCGGTGGCGTCTGAATCTGGTGAACATGGTGGGAGTTGACTGCGTTGGTCGTAGTGGAGGGCTTGCTCTC
TTCTGGAGGAGAGGGGTGGAGGTTAATCTGAGATGGAAGGGGCGATATCACATTGATGCGGAGGTG
>chrUn_1915
C-------------------------------------------------------------------------------
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-----------------AAGGCTGCATTCCAAAGATCTAGAGAAGGGAAAGGGAAGCGCTGCTTTGGGAGGGCAGGATGT
CATGGAAGAATCGGTGTGTGAGGGAGGCGATCTGACCGGAGGCAAGGGGAATGGGGCCAATAAGAAGGAAGGCTCCAGGT
TCAGAAGGAAGGAGAGGAGGAAGGATTTGGCTGACAGCACCCCTTTGGGTGTGATTCTCAGCACAAAGCGCGGGGGTGAG
GAGGGTGAGGGTGATGTGGACGTGACCAATGACGCTAAGAAGCAAAAGACTGGGGAGAGCTCTCCCACCACTCCTGAAGC
GGGGCTGTCGGAACAGCCCTGCAGGCCGCAATGAAAGTTATAGCTTGGAACTGCCGTGGGCTTGGGAACCCACGTGCAGT
TCGTAGCCTTCTGGAGCTGCAGAAGGCGGAAGCTCCCGACATCCTCTTCCTCTCGGAGACTAAAATGACAGAGAGGGAGG
TGGATTTCTTGCGATGGCGTCTGAATCTGGTGAACATGGTGGGAGTTGACTGCGTTGGTCGTAGTGGAGGGCTTGCTCTC
TTCTGGAGGAGAGGGGTGGAGGTTAATCTGAGATGGAAGGGGCGATATCACATTGATGCGGAGGTG
>SNPs
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS------------------------------S--------------------------------------------S
----------------------------S--SSSS---S----S-S-------------S--------------------
----------------S-S--------S----------------------------------------------------
----SSSSSSSSSSSSSSS-----------------------------------------------------------S-
------S--------------------------------------------------------------------S----
-S--------------------------S--------------------------S--------------------S--S
-----------------S--S---S----S------------------------SS------------------------
---------------------------------S-----------------S--------------S--S--------S-
-S-----S--------------------S-----S--------------------------S--S---------------
-----------------S----------------S---------S------S----------------------------
------------------------------------S---------------------------S--------------S
----------S----------S-------------S-----S-------------S------------------------
----------------------S---------------------S-----------------------------------
--S------S------------S-------------S--------S-----------------------S----------
----------S-----S--S-----------------S-----------------------S-----------S------
--------S--------------S--SS---S---------S---S----------------------S-----------
S--------------S--S-------------------------S--------S--------------SS----------
-----SS------S--------------S------S----------------S-------SS------------------
-------S-----------S-----------------------------------------------S------------
------------S-----------------------------------------------S-------------------
------------------------------S-S-----------------------------------------------
---------------------------------------------------------------------------S----
---------S-------------------S--------S----------------------------------S------
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--S---S-----------------------------------S-----------------------
>forward_92
------------------------------------------------------------------------CTTGATTC
CGCTCAACCCCT--------------------------------------------------------------------
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>reverse_1779
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------------------AGGGGATCCCATGCAAGTTG------------------------------------------
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