Multiple sequence alignment - TraesCS5B01G380300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G380300 chr5B 100.000 2846 0 0 1 2846 558283367 558286212 0.000000e+00 5256.0
1 TraesCS5B01G380300 chr5B 89.490 314 25 4 2121 2431 300126420 300126112 9.560000e-105 390.0
2 TraesCS5B01G380300 chr5B 92.000 75 6 0 2563 2637 300126005 300125931 3.880000e-19 106.0
3 TraesCS5B01G380300 chr5B 96.296 54 2 0 2793 2846 581507667 581507720 3.910000e-14 89.8
4 TraesCS5B01G380300 chr5B 96.226 53 2 0 2794 2846 263357203 263357255 1.400000e-13 87.9
5 TraesCS5B01G380300 chr5D 90.428 1379 46 36 545 1884 456591986 456593317 0.000000e+00 1736.0
6 TraesCS5B01G380300 chr5D 90.000 150 11 3 1 149 456591495 456591641 1.040000e-44 191.0
7 TraesCS5B01G380300 chr5D 90.244 123 5 3 1962 2081 456593390 456593508 1.370000e-33 154.0
8 TraesCS5B01G380300 chr5A 89.735 1169 68 26 753 1884 574400912 574399759 0.000000e+00 1447.0
9 TraesCS5B01G380300 chr5A 92.126 381 30 0 1140 1520 546566487 546566867 3.230000e-149 538.0
10 TraesCS5B01G380300 chr5A 93.182 44 2 1 10 52 197206801 197206758 2.370000e-06 63.9
11 TraesCS5B01G380300 chr1D 87.948 614 56 11 2134 2740 416280783 416281385 0.000000e+00 708.0
12 TraesCS5B01G380300 chr2D 85.162 647 57 22 2123 2766 366970923 366971533 6.690000e-176 627.0
13 TraesCS5B01G380300 chr2D 97.674 43 1 0 50 92 99130105 99130147 1.090000e-09 75.0
14 TraesCS5B01G380300 chr2D 93.182 44 2 1 10 52 579378091 579378048 2.370000e-06 63.9
15 TraesCS5B01G380300 chr7D 93.717 382 23 1 1140 1521 28782863 28782483 3.180000e-159 571.0
16 TraesCS5B01G380300 chr7D 92.208 77 4 2 2121 2196 81791226 81791301 1.080000e-19 108.0
17 TraesCS5B01G380300 chr1A 80.482 456 44 24 2366 2793 535756652 535756214 9.900000e-80 307.0
18 TraesCS5B01G380300 chr1A 92.437 119 6 1 2366 2481 521619333 521619215 1.750000e-37 167.0
19 TraesCS5B01G380300 chr1A 83.784 148 13 6 2121 2268 535756802 535756666 2.300000e-26 130.0
20 TraesCS5B01G380300 chr1A 90.566 53 4 1 1 52 79696229 79696177 5.090000e-08 69.4
21 TraesCS5B01G380300 chr7A 79.618 471 58 22 2347 2784 510500103 510500568 1.280000e-78 303.0
22 TraesCS5B01G380300 chr6A 80.463 389 42 22 2375 2736 31266467 31266848 1.680000e-67 267.0
23 TraesCS5B01G380300 chr2A 81.163 361 41 18 2375 2733 656692190 656692525 6.050000e-67 265.0
24 TraesCS5B01G380300 chr2A 93.478 46 2 1 10 54 636590768 636590723 1.830000e-07 67.6
25 TraesCS5B01G380300 chr2A 93.333 45 2 1 10 53 526340729 526340685 6.580000e-07 65.8
26 TraesCS5B01G380300 chr2A 91.489 47 3 1 10 55 652480321 652480275 2.370000e-06 63.9
27 TraesCS5B01G380300 chrUn 83.013 312 22 11 2123 2431 410586279 410585996 1.310000e-63 254.0
28 TraesCS5B01G380300 chrUn 82.692 312 23 11 2123 2431 410583413 410583130 6.090000e-62 248.0
29 TraesCS5B01G380300 chrUn 82.484 314 24 11 2120 2430 245745627 245745912 2.190000e-61 246.0
30 TraesCS5B01G380300 chrUn 91.892 74 6 0 2564 2637 245746018 245746091 1.390000e-18 104.0
31 TraesCS5B01G380300 chrUn 92.958 71 5 0 2567 2637 410583019 410582949 1.390000e-18 104.0
32 TraesCS5B01G380300 chrUn 92.958 71 5 0 2567 2637 410585885 410585815 1.390000e-18 104.0
33 TraesCS5B01G380300 chrUn 96.296 54 2 0 2793 2846 275301631 275301684 3.910000e-14 89.8
34 TraesCS5B01G380300 chrUn 96.296 54 2 0 2793 2846 308426159 308426106 3.910000e-14 89.8
35 TraesCS5B01G380300 chrUn 96.296 54 2 0 2793 2846 320740636 320740583 3.910000e-14 89.8
36 TraesCS5B01G380300 chr6B 79.024 410 48 24 2142 2547 650776147 650775772 2.190000e-61 246.0
37 TraesCS5B01G380300 chr7B 78.177 362 55 21 2123 2471 633109027 633108677 2.870000e-50 209.0
38 TraesCS5B01G380300 chr7B 89.888 89 9 0 2408 2496 633108804 633108716 6.440000e-22 115.0
39 TraesCS5B01G380300 chr7B 98.113 53 1 0 2794 2846 682337617 682337669 3.020000e-15 93.5
40 TraesCS5B01G380300 chr7B 96.296 54 2 0 2793 2846 342619635 342619688 3.910000e-14 89.8
41 TraesCS5B01G380300 chr4A 82.877 146 14 7 2123 2268 558209516 558209382 1.380000e-23 121.0
42 TraesCS5B01G380300 chr4D 90.000 80 6 2 2120 2198 121481463 121481385 5.020000e-18 102.0
43 TraesCS5B01G380300 chr2B 96.296 54 2 0 2793 2846 538874043 538874096 3.910000e-14 89.8
44 TraesCS5B01G380300 chr2B 97.297 37 1 0 2562 2598 751319238 751319202 2.370000e-06 63.9
45 TraesCS5B01G380300 chr2B 100.000 28 0 0 2098 2125 726078879 726078906 5.000000e-03 52.8
46 TraesCS5B01G380300 chr3B 96.226 53 2 0 2794 2846 101380599 101380651 1.400000e-13 87.9
47 TraesCS5B01G380300 chr3A 92.157 51 2 2 10 59 663259496 663259545 1.410000e-08 71.3
48 TraesCS5B01G380300 chr3A 100.000 28 0 0 2098 2125 423489489 423489462 5.000000e-03 52.8
49 TraesCS5B01G380300 chr3D 86.441 59 7 1 1 58 482487903 482487845 2.370000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G380300 chr5B 558283367 558286212 2845 False 5256.000000 5256 100.000 1 2846 1 chr5B.!!$F2 2845
1 TraesCS5B01G380300 chr5D 456591495 456593508 2013 False 693.666667 1736 90.224 1 2081 3 chr5D.!!$F1 2080
2 TraesCS5B01G380300 chr5A 574399759 574400912 1153 True 1447.000000 1447 89.735 753 1884 1 chr5A.!!$R2 1131
3 TraesCS5B01G380300 chr1D 416280783 416281385 602 False 708.000000 708 87.948 2134 2740 1 chr1D.!!$F1 606
4 TraesCS5B01G380300 chr2D 366970923 366971533 610 False 627.000000 627 85.162 2123 2766 1 chr2D.!!$F2 643
5 TraesCS5B01G380300 chr1A 535756214 535756802 588 True 218.500000 307 82.133 2121 2793 2 chr1A.!!$R3 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
307 490 0.036577 GCGCATGAGATATGCTCCCT 60.037 55.0 0.30 0.0 43.26 4.2 F
543 726 0.107361 GTGTAGGCGGCACCCTTAAT 60.107 55.0 13.08 0.0 40.58 1.4 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1759 2004 0.752376 GACCCTCCGATCTCGAACCT 60.752 60.0 0.22 0.0 43.02 3.50 R
2305 2600 0.978146 CGAGGAAGTGGAGATGGGGT 60.978 60.0 0.00 0.0 0.00 4.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
61 63 5.013704 TCAAAGAGGCCCTTAGTGTTTGATA 59.986 40.000 9.40 0.00 34.00 2.15
106 108 1.523758 AGGAATGGTTGCACTTCGTC 58.476 50.000 0.00 0.00 0.00 4.20
108 110 1.606668 GGAATGGTTGCACTTCGTCAA 59.393 47.619 0.00 0.00 0.00 3.18
109 111 2.350772 GGAATGGTTGCACTTCGTCAAG 60.351 50.000 0.00 0.00 35.50 3.02
110 112 1.238439 ATGGTTGCACTTCGTCAAGG 58.762 50.000 0.00 0.00 33.37 3.61
143 145 4.337763 CAAAGTCGATGCTCTACAAATGC 58.662 43.478 0.00 0.00 0.00 3.56
149 151 4.217334 TCGATGCTCTACAAATGCCAAAAA 59.783 37.500 0.00 0.00 0.00 1.94
150 152 4.324402 CGATGCTCTACAAATGCCAAAAAC 59.676 41.667 0.00 0.00 0.00 2.43
151 153 4.662468 TGCTCTACAAATGCCAAAAACA 57.338 36.364 0.00 0.00 0.00 2.83
156 158 3.192541 ACAAATGCCAAAAACAGGACC 57.807 42.857 0.00 0.00 0.00 4.46
158 160 1.799933 AATGCCAAAAACAGGACCCA 58.200 45.000 0.00 0.00 0.00 4.51
161 163 1.119684 GCCAAAAACAGGACCCAACT 58.880 50.000 0.00 0.00 0.00 3.16
163 165 2.741553 GCCAAAAACAGGACCCAACTTG 60.742 50.000 0.00 0.00 0.00 3.16
164 166 2.499693 CCAAAAACAGGACCCAACTTGT 59.500 45.455 0.00 0.00 0.00 3.16
165 167 3.055458 CCAAAAACAGGACCCAACTTGTT 60.055 43.478 0.00 0.00 40.73 2.83
166 168 4.564613 CCAAAAACAGGACCCAACTTGTTT 60.565 41.667 3.57 3.57 46.49 2.83
167 169 4.901197 AAAACAGGACCCAACTTGTTTT 57.099 36.364 13.15 13.15 46.86 2.43
168 170 4.901197 AAACAGGACCCAACTTGTTTTT 57.099 36.364 3.57 0.00 43.75 1.94
231 233 9.701098 AATTATGCATGTCATTTGAATATGGAC 57.299 29.630 10.16 0.00 36.63 4.02
232 234 5.172460 TGCATGTCATTTGAATATGGACG 57.828 39.130 0.00 0.00 0.00 4.79
233 235 4.639755 TGCATGTCATTTGAATATGGACGT 59.360 37.500 0.00 0.00 0.00 4.34
234 236 5.125257 TGCATGTCATTTGAATATGGACGTT 59.875 36.000 0.00 0.00 0.00 3.99
235 237 6.035843 GCATGTCATTTGAATATGGACGTTT 58.964 36.000 0.00 0.00 0.00 3.60
236 238 7.148171 TGCATGTCATTTGAATATGGACGTTTA 60.148 33.333 0.00 0.00 0.00 2.01
237 239 7.165812 GCATGTCATTTGAATATGGACGTTTAC 59.834 37.037 0.00 0.00 0.00 2.01
238 240 6.767080 TGTCATTTGAATATGGACGTTTACG 58.233 36.000 0.00 0.00 46.33 3.18
296 479 0.378257 AGTATTTTGGCGCGCATGAG 59.622 50.000 34.42 0.00 0.00 2.90
302 485 1.844771 TTGGCGCGCATGAGATATGC 61.845 55.000 34.42 11.73 41.35 3.14
307 490 0.036577 GCGCATGAGATATGCTCCCT 60.037 55.000 0.30 0.00 43.26 4.20
308 491 1.205655 GCGCATGAGATATGCTCCCTA 59.794 52.381 0.30 0.00 43.26 3.53
309 492 2.738000 GCGCATGAGATATGCTCCCTAG 60.738 54.545 0.30 0.00 43.26 3.02
310 493 2.757314 CGCATGAGATATGCTCCCTAGA 59.243 50.000 9.82 0.00 43.26 2.43
311 494 3.181488 CGCATGAGATATGCTCCCTAGAG 60.181 52.174 9.82 0.00 43.26 2.43
327 510 8.558973 CTCCCTAGAGCCAAATTTAATATCTG 57.441 38.462 0.00 0.00 32.13 2.90
328 511 7.461749 TCCCTAGAGCCAAATTTAATATCTGG 58.538 38.462 0.00 0.00 0.00 3.86
329 512 7.294720 TCCCTAGAGCCAAATTTAATATCTGGA 59.705 37.037 0.00 0.00 0.00 3.86
330 513 7.944554 CCCTAGAGCCAAATTTAATATCTGGAA 59.055 37.037 0.00 0.00 0.00 3.53
331 514 9.354673 CCTAGAGCCAAATTTAATATCTGGAAA 57.645 33.333 0.00 0.00 0.00 3.13
347 530 6.925610 TCTGGAAAATATGTGGATTTCTCG 57.074 37.500 0.00 0.00 34.34 4.04
348 531 6.414732 TCTGGAAAATATGTGGATTTCTCGT 58.585 36.000 0.00 0.00 34.34 4.18
349 532 7.561251 TCTGGAAAATATGTGGATTTCTCGTA 58.439 34.615 0.00 0.00 34.34 3.43
350 533 8.044309 TCTGGAAAATATGTGGATTTCTCGTAA 58.956 33.333 0.00 0.00 34.34 3.18
351 534 8.746052 TGGAAAATATGTGGATTTCTCGTAAT 57.254 30.769 0.00 0.00 34.34 1.89
352 535 9.839817 TGGAAAATATGTGGATTTCTCGTAATA 57.160 29.630 0.00 0.00 34.34 0.98
359 542 8.888579 ATGTGGATTTCTCGTAATAACTAAGG 57.111 34.615 0.00 0.00 0.00 2.69
360 543 7.270047 TGTGGATTTCTCGTAATAACTAAGGG 58.730 38.462 0.00 0.00 0.00 3.95
361 544 6.704937 GTGGATTTCTCGTAATAACTAAGGGG 59.295 42.308 0.00 0.00 0.00 4.79
362 545 5.699915 GGATTTCTCGTAATAACTAAGGGGC 59.300 44.000 0.00 0.00 0.00 5.80
363 546 3.996150 TCTCGTAATAACTAAGGGGCG 57.004 47.619 0.00 0.00 0.00 6.13
364 547 3.554934 TCTCGTAATAACTAAGGGGCGA 58.445 45.455 0.00 0.00 0.00 5.54
365 548 4.147321 TCTCGTAATAACTAAGGGGCGAT 58.853 43.478 0.00 0.00 0.00 4.58
366 549 4.217118 TCTCGTAATAACTAAGGGGCGATC 59.783 45.833 0.00 0.00 0.00 3.69
367 550 3.890756 TCGTAATAACTAAGGGGCGATCA 59.109 43.478 0.00 0.00 0.00 2.92
368 551 4.341806 TCGTAATAACTAAGGGGCGATCAA 59.658 41.667 0.00 0.00 0.00 2.57
369 552 4.684703 CGTAATAACTAAGGGGCGATCAAG 59.315 45.833 0.00 0.00 0.00 3.02
370 553 5.508489 CGTAATAACTAAGGGGCGATCAAGA 60.508 44.000 0.00 0.00 0.00 3.02
371 554 5.367945 AATAACTAAGGGGCGATCAAGAA 57.632 39.130 0.00 0.00 0.00 2.52
372 555 3.713826 AACTAAGGGGCGATCAAGAAA 57.286 42.857 0.00 0.00 0.00 2.52
373 556 3.268023 ACTAAGGGGCGATCAAGAAAG 57.732 47.619 0.00 0.00 0.00 2.62
374 557 2.838202 ACTAAGGGGCGATCAAGAAAGA 59.162 45.455 0.00 0.00 0.00 2.52
375 558 3.456277 ACTAAGGGGCGATCAAGAAAGAT 59.544 43.478 0.00 0.00 0.00 2.40
376 559 4.654262 ACTAAGGGGCGATCAAGAAAGATA 59.346 41.667 0.00 0.00 0.00 1.98
377 560 3.477210 AGGGGCGATCAAGAAAGATAC 57.523 47.619 0.00 0.00 0.00 2.24
378 561 2.771943 AGGGGCGATCAAGAAAGATACA 59.228 45.455 0.00 0.00 0.00 2.29
379 562 3.392616 AGGGGCGATCAAGAAAGATACAT 59.607 43.478 0.00 0.00 0.00 2.29
380 563 3.748568 GGGGCGATCAAGAAAGATACATC 59.251 47.826 0.00 0.00 0.00 3.06
381 564 4.503991 GGGGCGATCAAGAAAGATACATCT 60.504 45.833 0.00 0.00 39.22 2.90
383 566 5.178438 GGGCGATCAAGAAAGATACATCTTC 59.822 44.000 4.98 0.48 45.83 2.87
384 567 5.988561 GGCGATCAAGAAAGATACATCTTCT 59.011 40.000 4.98 2.51 45.83 2.85
385 568 6.145371 GGCGATCAAGAAAGATACATCTTCTC 59.855 42.308 4.98 5.76 45.83 2.87
386 569 6.145371 GCGATCAAGAAAGATACATCTTCTCC 59.855 42.308 4.98 0.00 45.83 3.71
387 570 7.432869 CGATCAAGAAAGATACATCTTCTCCT 58.567 38.462 4.98 1.52 45.83 3.69
388 571 8.572185 CGATCAAGAAAGATACATCTTCTCCTA 58.428 37.037 4.98 0.00 45.83 2.94
394 577 9.206690 AGAAAGATACATCTTCTCCTATTCACA 57.793 33.333 4.98 0.00 45.83 3.58
395 578 9.255304 GAAAGATACATCTTCTCCTATTCACAC 57.745 37.037 4.98 0.00 45.83 3.82
396 579 7.904558 AGATACATCTTCTCCTATTCACACA 57.095 36.000 0.00 0.00 31.97 3.72
397 580 8.489676 AGATACATCTTCTCCTATTCACACAT 57.510 34.615 0.00 0.00 31.97 3.21
398 581 8.932610 AGATACATCTTCTCCTATTCACACATT 58.067 33.333 0.00 0.00 31.97 2.71
399 582 9.553064 GATACATCTTCTCCTATTCACACATTT 57.447 33.333 0.00 0.00 0.00 2.32
400 583 9.911788 ATACATCTTCTCCTATTCACACATTTT 57.088 29.630 0.00 0.00 0.00 1.82
401 584 8.048534 ACATCTTCTCCTATTCACACATTTTG 57.951 34.615 0.00 0.00 0.00 2.44
402 585 7.667219 ACATCTTCTCCTATTCACACATTTTGT 59.333 33.333 0.00 0.00 39.97 2.83
403 586 9.166173 CATCTTCTCCTATTCACACATTTTGTA 57.834 33.333 0.00 0.00 35.67 2.41
404 587 8.777865 TCTTCTCCTATTCACACATTTTGTAG 57.222 34.615 0.00 0.00 35.67 2.74
405 588 8.375506 TCTTCTCCTATTCACACATTTTGTAGT 58.624 33.333 0.00 0.00 35.67 2.73
406 589 8.918202 TTCTCCTATTCACACATTTTGTAGTT 57.082 30.769 0.00 0.00 35.67 2.24
407 590 8.918202 TCTCCTATTCACACATTTTGTAGTTT 57.082 30.769 0.00 0.00 35.67 2.66
414 597 9.912634 ATTCACACATTTTGTAGTTTAATGGAG 57.087 29.630 0.00 0.00 35.67 3.86
415 598 8.458573 TCACACATTTTGTAGTTTAATGGAGT 57.541 30.769 0.00 0.00 35.67 3.85
416 599 8.564574 TCACACATTTTGTAGTTTAATGGAGTC 58.435 33.333 0.00 0.00 35.67 3.36
417 600 8.349245 CACACATTTTGTAGTTTAATGGAGTCA 58.651 33.333 0.00 0.00 35.67 3.41
418 601 8.349983 ACACATTTTGTAGTTTAATGGAGTCAC 58.650 33.333 0.00 0.00 36.32 3.67
419 602 7.807907 CACATTTTGTAGTTTAATGGAGTCACC 59.192 37.037 0.00 0.00 34.40 4.02
420 603 6.548441 TTTTGTAGTTTAATGGAGTCACCG 57.452 37.500 0.00 0.00 42.61 4.94
421 604 4.877378 TGTAGTTTAATGGAGTCACCGT 57.123 40.909 0.00 0.00 42.61 4.83
422 605 5.981088 TGTAGTTTAATGGAGTCACCGTA 57.019 39.130 0.00 0.00 42.61 4.02
423 606 6.534475 TGTAGTTTAATGGAGTCACCGTAT 57.466 37.500 0.00 0.00 42.61 3.06
424 607 7.643569 TGTAGTTTAATGGAGTCACCGTATA 57.356 36.000 0.00 0.00 42.61 1.47
425 608 7.709947 TGTAGTTTAATGGAGTCACCGTATAG 58.290 38.462 0.00 0.00 42.61 1.31
426 609 6.786967 AGTTTAATGGAGTCACCGTATAGT 57.213 37.500 0.00 0.00 42.61 2.12
427 610 7.179076 AGTTTAATGGAGTCACCGTATAGTT 57.821 36.000 0.00 0.00 42.61 2.24
428 611 7.618137 AGTTTAATGGAGTCACCGTATAGTTT 58.382 34.615 0.00 0.00 42.61 2.66
429 612 8.752187 AGTTTAATGGAGTCACCGTATAGTTTA 58.248 33.333 0.00 0.00 42.61 2.01
430 613 9.028185 GTTTAATGGAGTCACCGTATAGTTTAG 57.972 37.037 0.00 0.00 42.61 1.85
431 614 5.786264 ATGGAGTCACCGTATAGTTTAGG 57.214 43.478 0.00 0.00 42.61 2.69
432 615 4.858850 TGGAGTCACCGTATAGTTTAGGA 58.141 43.478 0.00 0.00 42.61 2.94
433 616 4.885907 TGGAGTCACCGTATAGTTTAGGAG 59.114 45.833 0.00 0.00 42.61 3.69
434 617 4.261530 GGAGTCACCGTATAGTTTAGGAGC 60.262 50.000 0.00 0.00 0.00 4.70
435 618 4.275810 AGTCACCGTATAGTTTAGGAGCA 58.724 43.478 0.00 0.00 0.00 4.26
436 619 4.097589 AGTCACCGTATAGTTTAGGAGCAC 59.902 45.833 0.00 0.00 0.00 4.40
437 620 3.065786 TCACCGTATAGTTTAGGAGCACG 59.934 47.826 0.00 0.00 0.00 5.34
438 621 2.223665 ACCGTATAGTTTAGGAGCACGC 60.224 50.000 0.00 0.00 0.00 5.34
439 622 2.223641 CCGTATAGTTTAGGAGCACGCA 60.224 50.000 0.00 0.00 0.00 5.24
440 623 3.441163 CGTATAGTTTAGGAGCACGCAA 58.559 45.455 0.00 0.00 0.00 4.85
441 624 3.861113 CGTATAGTTTAGGAGCACGCAAA 59.139 43.478 0.00 0.00 0.00 3.68
442 625 4.327898 CGTATAGTTTAGGAGCACGCAAAA 59.672 41.667 0.00 0.00 0.00 2.44
443 626 4.680171 ATAGTTTAGGAGCACGCAAAAC 57.320 40.909 0.00 0.00 0.00 2.43
444 627 2.572290 AGTTTAGGAGCACGCAAAACT 58.428 42.857 0.00 0.00 35.98 2.66
445 628 3.735591 AGTTTAGGAGCACGCAAAACTA 58.264 40.909 8.91 0.00 38.31 2.24
446 629 4.131596 AGTTTAGGAGCACGCAAAACTAA 58.868 39.130 8.91 0.00 38.31 2.24
447 630 4.024302 AGTTTAGGAGCACGCAAAACTAAC 60.024 41.667 8.91 0.00 38.31 2.34
448 631 1.235724 AGGAGCACGCAAAACTAACC 58.764 50.000 0.00 0.00 0.00 2.85
449 632 0.110373 GGAGCACGCAAAACTAACCG 60.110 55.000 0.00 0.00 0.00 4.44
450 633 0.584876 GAGCACGCAAAACTAACCGT 59.415 50.000 0.00 0.00 0.00 4.83
451 634 1.003223 GAGCACGCAAAACTAACCGTT 60.003 47.619 0.00 0.00 37.47 4.44
452 635 2.211806 AGCACGCAAAACTAACCGTTA 58.788 42.857 0.00 0.00 33.90 3.18
453 636 2.222445 AGCACGCAAAACTAACCGTTAG 59.778 45.455 15.47 15.47 39.18 2.34
454 637 2.221517 GCACGCAAAACTAACCGTTAGA 59.778 45.455 22.48 0.00 36.73 2.10
455 638 3.663493 GCACGCAAAACTAACCGTTAGAG 60.663 47.826 22.48 11.22 36.73 2.43
456 639 3.737266 CACGCAAAACTAACCGTTAGAGA 59.263 43.478 22.48 0.00 36.73 3.10
457 640 4.387862 CACGCAAAACTAACCGTTAGAGAT 59.612 41.667 22.48 7.52 36.73 2.75
458 641 5.574055 CACGCAAAACTAACCGTTAGAGATA 59.426 40.000 22.48 0.00 36.73 1.98
459 642 6.089820 CACGCAAAACTAACCGTTAGAGATAA 59.910 38.462 22.48 0.00 36.73 1.75
460 643 6.089954 ACGCAAAACTAACCGTTAGAGATAAC 59.910 38.462 22.48 8.10 36.73 1.89
461 644 6.089820 CGCAAAACTAACCGTTAGAGATAACA 59.910 38.462 22.48 0.00 36.73 2.41
462 645 7.201496 CGCAAAACTAACCGTTAGAGATAACAT 60.201 37.037 22.48 0.00 36.73 2.71
463 646 8.448615 GCAAAACTAACCGTTAGAGATAACATT 58.551 33.333 22.48 3.56 36.73 2.71
464 647 9.968743 CAAAACTAACCGTTAGAGATAACATTC 57.031 33.333 22.48 0.00 36.73 2.67
465 648 9.715121 AAAACTAACCGTTAGAGATAACATTCA 57.285 29.630 22.48 0.00 36.73 2.57
466 649 9.715121 AAACTAACCGTTAGAGATAACATTCAA 57.285 29.630 22.48 0.00 36.73 2.69
467 650 9.715121 AACTAACCGTTAGAGATAACATTCAAA 57.285 29.630 22.48 0.00 36.73 2.69
468 651 9.148104 ACTAACCGTTAGAGATAACATTCAAAC 57.852 33.333 22.48 0.00 36.73 2.93
469 652 7.972832 AACCGTTAGAGATAACATTCAAACA 57.027 32.000 0.00 0.00 0.00 2.83
470 653 8.561738 AACCGTTAGAGATAACATTCAAACAT 57.438 30.769 0.00 0.00 0.00 2.71
471 654 9.661563 AACCGTTAGAGATAACATTCAAACATA 57.338 29.630 0.00 0.00 0.00 2.29
472 655 9.314321 ACCGTTAGAGATAACATTCAAACATAG 57.686 33.333 0.00 0.00 0.00 2.23
473 656 9.314321 CCGTTAGAGATAACATTCAAACATAGT 57.686 33.333 0.00 0.00 0.00 2.12
508 691 6.844696 TGTATTTTCATTATCGTCTCTGGC 57.155 37.500 0.00 0.00 0.00 4.85
509 692 6.582636 TGTATTTTCATTATCGTCTCTGGCT 58.417 36.000 0.00 0.00 0.00 4.75
510 693 5.998454 ATTTTCATTATCGTCTCTGGCTG 57.002 39.130 0.00 0.00 0.00 4.85
511 694 2.515926 TCATTATCGTCTCTGGCTGC 57.484 50.000 0.00 0.00 0.00 5.25
512 695 1.069204 TCATTATCGTCTCTGGCTGCC 59.931 52.381 12.87 12.87 0.00 4.85
513 696 1.069823 CATTATCGTCTCTGGCTGCCT 59.930 52.381 21.03 0.00 0.00 4.75
514 697 1.195115 TTATCGTCTCTGGCTGCCTT 58.805 50.000 21.03 0.00 0.00 4.35
515 698 1.195115 TATCGTCTCTGGCTGCCTTT 58.805 50.000 21.03 0.00 0.00 3.11
516 699 1.195115 ATCGTCTCTGGCTGCCTTTA 58.805 50.000 21.03 4.15 0.00 1.85
517 700 1.195115 TCGTCTCTGGCTGCCTTTAT 58.805 50.000 21.03 0.00 0.00 1.40
518 701 1.137086 TCGTCTCTGGCTGCCTTTATC 59.863 52.381 21.03 6.92 0.00 1.75
519 702 1.576356 GTCTCTGGCTGCCTTTATCG 58.424 55.000 21.03 2.70 0.00 2.92
520 703 1.137086 GTCTCTGGCTGCCTTTATCGA 59.863 52.381 21.03 5.05 0.00 3.59
521 704 1.137086 TCTCTGGCTGCCTTTATCGAC 59.863 52.381 21.03 0.00 0.00 4.20
522 705 0.178068 TCTGGCTGCCTTTATCGACC 59.822 55.000 21.03 0.00 0.00 4.79
523 706 0.107703 CTGGCTGCCTTTATCGACCA 60.108 55.000 21.03 0.00 0.00 4.02
524 707 0.107703 TGGCTGCCTTTATCGACCAG 60.108 55.000 21.03 0.00 0.00 4.00
525 708 0.107654 GGCTGCCTTTATCGACCAGT 60.108 55.000 12.43 0.00 0.00 4.00
526 709 1.009829 GCTGCCTTTATCGACCAGTG 58.990 55.000 0.00 0.00 0.00 3.66
527 710 1.676014 GCTGCCTTTATCGACCAGTGT 60.676 52.381 0.00 0.00 0.00 3.55
528 711 2.418197 GCTGCCTTTATCGACCAGTGTA 60.418 50.000 0.00 0.00 0.00 2.90
529 712 3.448686 CTGCCTTTATCGACCAGTGTAG 58.551 50.000 0.00 0.00 0.00 2.74
530 713 2.167693 TGCCTTTATCGACCAGTGTAGG 59.832 50.000 0.00 0.00 0.00 3.18
531 714 2.822764 CCTTTATCGACCAGTGTAGGC 58.177 52.381 0.00 0.00 0.00 3.93
532 715 2.460918 CTTTATCGACCAGTGTAGGCG 58.539 52.381 0.00 0.00 0.00 5.52
533 716 0.742505 TTATCGACCAGTGTAGGCGG 59.257 55.000 0.00 0.00 0.00 6.13
534 717 1.731433 TATCGACCAGTGTAGGCGGC 61.731 60.000 0.00 0.00 0.00 6.53
535 718 4.063967 CGACCAGTGTAGGCGGCA 62.064 66.667 13.08 0.00 0.00 5.69
536 719 2.434359 GACCAGTGTAGGCGGCAC 60.434 66.667 13.08 8.19 37.13 5.01
537 720 3.952628 GACCAGTGTAGGCGGCACC 62.953 68.421 13.08 0.56 37.56 5.01
538 721 4.778143 CCAGTGTAGGCGGCACCC 62.778 72.222 13.08 0.00 40.58 4.61
539 722 3.706373 CAGTGTAGGCGGCACCCT 61.706 66.667 13.08 1.01 40.58 4.34
540 723 2.928396 AGTGTAGGCGGCACCCTT 60.928 61.111 13.08 0.00 40.58 3.95
541 724 1.611261 AGTGTAGGCGGCACCCTTA 60.611 57.895 13.08 0.00 40.58 2.69
542 725 1.196104 AGTGTAGGCGGCACCCTTAA 61.196 55.000 13.08 0.00 40.58 1.85
543 726 0.107361 GTGTAGGCGGCACCCTTAAT 60.107 55.000 13.08 0.00 40.58 1.40
604 787 1.842562 ACTAGTGGTAGAGCTACGGGA 59.157 52.381 0.00 0.00 36.94 5.14
605 788 2.442502 ACTAGTGGTAGAGCTACGGGAT 59.557 50.000 0.00 0.00 36.94 3.85
606 789 3.649981 ACTAGTGGTAGAGCTACGGGATA 59.350 47.826 0.00 0.00 36.94 2.59
607 790 3.143211 AGTGGTAGAGCTACGGGATAG 57.857 52.381 1.90 0.00 36.94 2.08
608 791 2.161030 GTGGTAGAGCTACGGGATAGG 58.839 57.143 1.90 0.00 36.94 2.57
609 792 1.175654 GGTAGAGCTACGGGATAGGC 58.824 60.000 1.90 0.00 36.94 3.93
610 793 0.803740 GTAGAGCTACGGGATAGGCG 59.196 60.000 0.00 0.00 0.00 5.52
611 794 0.322277 TAGAGCTACGGGATAGGCGG 60.322 60.000 0.00 0.00 0.00 6.13
612 795 1.602888 GAGCTACGGGATAGGCGGA 60.603 63.158 0.00 0.00 0.00 5.54
693 882 8.839310 CATGGACCATGGTTAATTAAACAAAA 57.161 30.769 24.65 0.00 40.08 2.44
725 916 3.497332 GGAAAAGGGGTAAAGCTTGTCT 58.503 45.455 0.00 0.00 0.00 3.41
744 935 3.255379 GTAGCACGTGCGCTAGCC 61.255 66.667 32.94 15.17 44.92 3.93
750 941 2.742372 CGTGCGCTAGCCAACCTT 60.742 61.111 9.73 0.00 44.33 3.50
823 1028 2.774234 GACCTCCTCTTTCCATCCATCA 59.226 50.000 0.00 0.00 0.00 3.07
824 1029 3.192944 ACCTCCTCTTTCCATCCATCAA 58.807 45.455 0.00 0.00 0.00 2.57
825 1030 3.790408 ACCTCCTCTTTCCATCCATCAAT 59.210 43.478 0.00 0.00 0.00 2.57
826 1031 4.141298 ACCTCCTCTTTCCATCCATCAATC 60.141 45.833 0.00 0.00 0.00 2.67
827 1032 4.104420 CCTCCTCTTTCCATCCATCAATCT 59.896 45.833 0.00 0.00 0.00 2.40
828 1033 5.301835 TCCTCTTTCCATCCATCAATCTC 57.698 43.478 0.00 0.00 0.00 2.75
829 1034 4.723285 TCCTCTTTCCATCCATCAATCTCA 59.277 41.667 0.00 0.00 0.00 3.27
830 1035 5.192321 TCCTCTTTCCATCCATCAATCTCAA 59.808 40.000 0.00 0.00 0.00 3.02
831 1036 5.889853 CCTCTTTCCATCCATCAATCTCAAA 59.110 40.000 0.00 0.00 0.00 2.69
832 1037 6.550108 CCTCTTTCCATCCATCAATCTCAAAT 59.450 38.462 0.00 0.00 0.00 2.32
846 1062 7.805163 TCAATCTCAAATCTCAGGCCTAATTA 58.195 34.615 3.98 0.00 0.00 1.40
855 1071 3.857052 TCAGGCCTAATTACACGACTTG 58.143 45.455 3.98 0.00 0.00 3.16
868 1089 4.706035 ACACGACTTGGTATTAAACACCA 58.294 39.130 7.95 7.95 44.35 4.17
882 1103 2.040544 CACCACCCGAGCCATCAAC 61.041 63.158 0.00 0.00 0.00 3.18
886 1107 2.190578 CCCGAGCCATCAACCTCC 59.809 66.667 0.00 0.00 0.00 4.30
915 1136 1.468506 ATCGCACCAAACCAAACCCC 61.469 55.000 0.00 0.00 0.00 4.95
916 1137 2.419620 GCACCAAACCAAACCCCG 59.580 61.111 0.00 0.00 0.00 5.73
918 1139 2.840572 ACCAAACCAAACCCCGCC 60.841 61.111 0.00 0.00 0.00 6.13
919 1140 3.984749 CCAAACCAAACCCCGCCG 61.985 66.667 0.00 0.00 0.00 6.46
920 1141 3.220658 CAAACCAAACCCCGCCGT 61.221 61.111 0.00 0.00 0.00 5.68
921 1142 2.908428 AAACCAAACCCCGCCGTC 60.908 61.111 0.00 0.00 0.00 4.79
947 1189 1.572941 GACCGAGGGAAAACGCAAC 59.427 57.895 0.00 0.00 0.00 4.17
948 1190 1.848932 GACCGAGGGAAAACGCAACC 61.849 60.000 0.00 0.00 0.00 3.77
949 1191 1.894756 CCGAGGGAAAACGCAACCA 60.895 57.895 0.00 0.00 0.00 3.67
950 1192 1.574428 CGAGGGAAAACGCAACCAG 59.426 57.895 0.00 0.00 0.00 4.00
951 1193 1.852067 CGAGGGAAAACGCAACCAGG 61.852 60.000 0.00 0.00 0.00 4.45
952 1194 0.536460 GAGGGAAAACGCAACCAGGA 60.536 55.000 0.00 0.00 0.00 3.86
954 1196 1.285950 GGAAAACGCAACCAGGAGC 59.714 57.895 0.00 0.00 0.00 4.70
955 1197 1.172812 GGAAAACGCAACCAGGAGCT 61.173 55.000 0.00 0.00 0.00 4.09
967 1209 3.785859 GGAGCTCGGCCATGGACA 61.786 66.667 20.22 3.77 0.00 4.02
969 1211 3.005539 AGCTCGGCCATGGACACT 61.006 61.111 20.22 8.85 0.00 3.55
973 1215 1.663379 CTCGGCCATGGACACTACGA 61.663 60.000 20.22 13.88 0.00 3.43
974 1216 1.518572 CGGCCATGGACACTACGAC 60.519 63.158 20.22 0.00 0.00 4.34
976 1218 2.165301 GCCATGGACACTACGACGC 61.165 63.158 18.40 0.00 0.00 5.19
977 1219 1.872234 CCATGGACACTACGACGCG 60.872 63.158 5.56 3.53 0.00 6.01
978 1220 1.872234 CATGGACACTACGACGCGG 60.872 63.158 12.47 0.00 0.00 6.46
980 1222 3.434319 GGACACTACGACGCGGGA 61.434 66.667 12.47 0.00 0.00 5.14
981 1223 2.202401 GACACTACGACGCGGGAC 60.202 66.667 12.47 0.00 0.00 4.46
1013 1255 4.740822 GGGCATGAACAGGGGCGT 62.741 66.667 0.00 0.00 0.00 5.68
1759 2004 3.219928 GAGGCGCCAGGATCGAGA 61.220 66.667 31.54 0.00 0.00 4.04
1782 2027 1.152943 CGAGATCGGAGGGTCCAGA 60.153 63.158 0.00 0.00 35.91 3.86
1871 2140 4.021916 CCTCTTTCAAGGCCTGATTGATT 58.978 43.478 5.69 0.00 36.60 2.57
1872 2141 4.465305 CCTCTTTCAAGGCCTGATTGATTT 59.535 41.667 5.69 0.00 36.60 2.17
1873 2142 5.653769 CCTCTTTCAAGGCCTGATTGATTTA 59.346 40.000 5.69 0.00 36.60 1.40
1874 2143 6.183360 CCTCTTTCAAGGCCTGATTGATTTAG 60.183 42.308 5.69 5.08 36.60 1.85
1875 2144 6.248433 TCTTTCAAGGCCTGATTGATTTAGT 58.752 36.000 5.69 0.00 36.60 2.24
1876 2145 6.375455 TCTTTCAAGGCCTGATTGATTTAGTC 59.625 38.462 5.69 0.00 36.60 2.59
1877 2146 5.441718 TCAAGGCCTGATTGATTTAGTCT 57.558 39.130 5.69 0.00 31.86 3.24
1878 2147 5.431765 TCAAGGCCTGATTGATTTAGTCTC 58.568 41.667 5.69 0.00 31.86 3.36
1879 2148 5.045651 TCAAGGCCTGATTGATTTAGTCTCA 60.046 40.000 5.69 0.00 31.86 3.27
1880 2149 5.643421 AGGCCTGATTGATTTAGTCTCAT 57.357 39.130 3.11 0.00 0.00 2.90
1881 2150 5.619220 AGGCCTGATTGATTTAGTCTCATC 58.381 41.667 3.11 0.00 0.00 2.92
1882 2151 5.369110 AGGCCTGATTGATTTAGTCTCATCT 59.631 40.000 3.11 0.00 0.00 2.90
1883 2152 6.060788 GGCCTGATTGATTTAGTCTCATCTT 58.939 40.000 0.00 0.00 0.00 2.40
1884 2153 6.204495 GGCCTGATTGATTTAGTCTCATCTTC 59.796 42.308 0.00 0.00 0.00 2.87
1885 2154 6.991531 GCCTGATTGATTTAGTCTCATCTTCT 59.008 38.462 0.00 0.00 0.00 2.85
1886 2155 7.498570 GCCTGATTGATTTAGTCTCATCTTCTT 59.501 37.037 0.00 0.00 0.00 2.52
1887 2156 9.393512 CCTGATTGATTTAGTCTCATCTTCTTT 57.606 33.333 0.00 0.00 0.00 2.52
1927 2196 4.992511 TTGGTGTACCCGCCGTGC 62.993 66.667 0.00 0.00 44.67 5.34
1953 2222 3.120820 CGTAGCACAAAACTTGATGCGTA 60.121 43.478 0.00 0.00 40.30 4.42
1956 2225 4.229096 AGCACAAAACTTGATGCGTATTG 58.771 39.130 0.00 0.00 40.30 1.90
1994 2286 9.554724 TGTTTTATTTGAAGAGAATAATGACGC 57.445 29.630 0.00 0.00 31.23 5.19
2015 2307 3.812577 TCGATTGCGATCACTGTGT 57.187 47.368 14.39 0.00 42.51 3.72
2016 2308 1.349234 TCGATTGCGATCACTGTGTG 58.651 50.000 14.39 0.72 42.51 3.82
2017 2309 1.070821 CGATTGCGATCACTGTGTGT 58.929 50.000 14.39 0.00 40.82 3.72
2018 2310 1.201845 CGATTGCGATCACTGTGTGTG 60.202 52.381 14.39 0.01 43.36 3.82
2031 2326 1.138069 TGTGTGTGGATTGTCGTGAGT 59.862 47.619 0.00 0.00 0.00 3.41
2041 2336 2.209690 TGTCGTGAGTGATGGGTCTA 57.790 50.000 0.00 0.00 0.00 2.59
2059 2354 6.213195 TGGGTCTACGTTTAGGAAGGAATTTA 59.787 38.462 0.00 0.00 0.00 1.40
2060 2355 6.536582 GGGTCTACGTTTAGGAAGGAATTTAC 59.463 42.308 0.00 0.00 0.00 2.01
2061 2356 6.254373 GGTCTACGTTTAGGAAGGAATTTACG 59.746 42.308 0.00 0.00 0.00 3.18
2062 2357 4.934075 ACGTTTAGGAAGGAATTTACGC 57.066 40.909 0.00 0.00 0.00 4.42
2081 2376 2.462203 CGCACGTGTGTACATTTGTTTG 59.538 45.455 20.82 0.00 0.00 2.93
2082 2377 3.430931 GCACGTGTGTACATTTGTTTGT 58.569 40.909 18.38 0.00 0.00 2.83
2083 2378 3.480668 GCACGTGTGTACATTTGTTTGTC 59.519 43.478 18.38 0.00 0.00 3.18
2084 2379 4.729458 GCACGTGTGTACATTTGTTTGTCT 60.729 41.667 18.38 0.00 0.00 3.41
2085 2380 4.961551 CACGTGTGTACATTTGTTTGTCTC 59.038 41.667 7.58 0.00 0.00 3.36
2086 2381 4.200827 CGTGTGTACATTTGTTTGTCTCG 58.799 43.478 0.00 0.00 0.00 4.04
2087 2382 3.966218 GTGTGTACATTTGTTTGTCTCGC 59.034 43.478 0.00 0.00 0.00 5.03
2088 2383 3.874543 TGTGTACATTTGTTTGTCTCGCT 59.125 39.130 0.00 0.00 0.00 4.93
2089 2384 5.050634 GTGTGTACATTTGTTTGTCTCGCTA 60.051 40.000 0.00 0.00 0.00 4.26
2090 2385 5.050634 TGTGTACATTTGTTTGTCTCGCTAC 60.051 40.000 0.00 0.00 0.00 3.58
2091 2386 3.788434 ACATTTGTTTGTCTCGCTACG 57.212 42.857 0.00 0.00 0.00 3.51
2092 2387 3.128349 ACATTTGTTTGTCTCGCTACGT 58.872 40.909 0.00 0.00 0.00 3.57
2093 2388 4.300803 ACATTTGTTTGTCTCGCTACGTA 58.699 39.130 0.00 0.00 0.00 3.57
2094 2389 4.384846 ACATTTGTTTGTCTCGCTACGTAG 59.615 41.667 18.47 18.47 0.00 3.51
2096 2391 2.924903 TGTTTGTCTCGCTACGTAGTG 58.075 47.619 26.57 26.57 45.73 2.74
2097 2392 2.248487 GTTTGTCTCGCTACGTAGTGG 58.752 52.381 30.23 21.92 45.73 4.00
2098 2393 1.812235 TTGTCTCGCTACGTAGTGGA 58.188 50.000 30.23 23.48 43.65 4.02
2099 2394 2.034104 TGTCTCGCTACGTAGTGGAT 57.966 50.000 30.23 0.00 43.65 3.41
2100 2395 3.183793 TGTCTCGCTACGTAGTGGATA 57.816 47.619 30.23 21.79 43.65 2.59
2101 2396 2.868583 TGTCTCGCTACGTAGTGGATAC 59.131 50.000 30.23 24.43 43.65 2.24
2102 2397 3.129871 GTCTCGCTACGTAGTGGATACT 58.870 50.000 30.23 0.00 43.65 2.12
2103 2398 3.559242 GTCTCGCTACGTAGTGGATACTT 59.441 47.826 30.23 0.00 43.65 2.24
2104 2399 3.806521 TCTCGCTACGTAGTGGATACTTC 59.193 47.826 30.23 8.35 43.65 3.01
2105 2400 2.874701 TCGCTACGTAGTGGATACTTCC 59.125 50.000 30.23 7.69 43.65 3.46
2106 2401 2.877168 CGCTACGTAGTGGATACTTCCT 59.123 50.000 25.19 0.00 43.65 3.36
2107 2402 3.059051 CGCTACGTAGTGGATACTTCCTC 60.059 52.174 25.19 3.49 43.65 3.71
2108 2403 4.136051 GCTACGTAGTGGATACTTCCTCT 58.864 47.826 22.98 2.54 43.65 3.69
2109 2404 4.023878 GCTACGTAGTGGATACTTCCTCTG 60.024 50.000 22.98 0.00 43.65 3.35
2110 2405 3.965694 ACGTAGTGGATACTTCCTCTGT 58.034 45.455 6.81 0.00 43.89 3.41
2111 2406 4.342359 ACGTAGTGGATACTTCCTCTGTT 58.658 43.478 6.81 0.00 43.89 3.16
2112 2407 4.398673 ACGTAGTGGATACTTCCTCTGTTC 59.601 45.833 6.81 0.00 43.89 3.18
2113 2408 4.398358 CGTAGTGGATACTTCCTCTGTTCA 59.602 45.833 6.81 0.00 43.89 3.18
2114 2409 4.810191 AGTGGATACTTCCTCTGTTCAC 57.190 45.455 0.00 0.00 42.81 3.18
2115 2410 4.160329 AGTGGATACTTCCTCTGTTCACA 58.840 43.478 0.00 0.00 42.81 3.58
2116 2411 4.593206 AGTGGATACTTCCTCTGTTCACAA 59.407 41.667 0.00 0.00 42.81 3.33
2117 2412 5.071788 AGTGGATACTTCCTCTGTTCACAAA 59.928 40.000 0.00 0.00 42.81 2.83
2118 2413 5.940470 GTGGATACTTCCTCTGTTCACAAAT 59.060 40.000 0.00 0.00 43.07 2.32
2119 2414 7.038302 AGTGGATACTTCCTCTGTTCACAAATA 60.038 37.037 0.00 0.00 42.81 1.40
2139 2434 6.874288 AATATAAGAGCAACTCCAATGAGC 57.126 37.500 0.00 0.00 42.74 4.26
2157 2452 4.371975 CGACCCAAACGGACACAT 57.628 55.556 0.00 0.00 34.64 3.21
2176 2471 6.045955 ACACATATTTTGTCCGCTTTTTGTT 58.954 32.000 0.00 0.00 36.00 2.83
2188 2483 2.456010 CTTTTTGTTCGTTTGGGTCGG 58.544 47.619 0.00 0.00 0.00 4.79
2289 2584 3.379445 AGCAGCACCATGGCAAGC 61.379 61.111 13.04 14.02 37.35 4.01
2297 2592 0.178953 ACCATGGCAAGCAACTCCTT 60.179 50.000 13.04 0.00 0.00 3.36
2316 2611 3.731728 GCAGCCACCCCATCTCCA 61.732 66.667 0.00 0.00 0.00 3.86
2368 2663 2.282958 AGGAACCTCCTCGCGTCA 60.283 61.111 5.77 0.00 45.66 4.35
2436 2734 4.056584 TCCCCTCCTTCTCGCCGA 62.057 66.667 0.00 0.00 0.00 5.54
2500 2806 4.067512 TCCGCTCCTCCTCCAGCT 62.068 66.667 0.00 0.00 33.09 4.24
2503 2809 3.397439 GCTCCTCCTCCAGCTGCA 61.397 66.667 8.66 0.00 32.48 4.41
2633 3000 0.890996 CCGCCAAGTGCTTCTTCCTT 60.891 55.000 0.00 0.00 38.05 3.36
2642 3009 1.351017 TGCTTCTTCCTTTGGATCGGT 59.649 47.619 0.00 0.00 0.00 4.69
2758 3125 3.127533 GCCGCCGCAAGATCTTGT 61.128 61.111 30.88 0.00 42.31 3.16
2784 3151 2.603776 AAGTCGGGGGTTCGCTCT 60.604 61.111 0.00 0.00 0.00 4.09
2786 3153 3.692406 GTCGGGGGTTCGCTCTGT 61.692 66.667 0.00 0.00 0.00 3.41
2797 3164 2.260434 GCTCTGTCGCGGGTGTAA 59.740 61.111 6.13 0.00 0.00 2.41
2798 3165 2.092882 GCTCTGTCGCGGGTGTAAC 61.093 63.158 6.13 0.00 0.00 2.50
2799 3166 1.800315 CTCTGTCGCGGGTGTAACG 60.800 63.158 6.13 0.00 38.12 3.18
2807 3174 2.897972 GGGTGTAACGCCTCGGAT 59.102 61.111 0.00 0.00 45.11 4.18
2808 3175 1.219935 GGGTGTAACGCCTCGGATT 59.780 57.895 0.00 0.00 45.11 3.01
2809 3176 0.808847 GGGTGTAACGCCTCGGATTC 60.809 60.000 0.00 0.00 45.11 2.52
2810 3177 1.143969 GGTGTAACGCCTCGGATTCG 61.144 60.000 0.00 0.00 38.12 3.34
2811 3178 0.179156 GTGTAACGCCTCGGATTCGA 60.179 55.000 0.00 0.00 43.86 3.71
2812 3179 0.742505 TGTAACGCCTCGGATTCGAT 59.257 50.000 0.00 0.00 45.04 3.59
2813 3180 1.129326 GTAACGCCTCGGATTCGATG 58.871 55.000 0.00 0.00 45.04 3.84
2816 3183 2.279517 GCCTCGGATTCGATGCGT 60.280 61.111 7.96 0.00 44.32 5.24
2817 3184 2.303676 GCCTCGGATTCGATGCGTC 61.304 63.158 7.96 0.00 44.32 5.19
2818 3185 1.065764 CCTCGGATTCGATGCGTCA 59.934 57.895 6.75 0.00 45.04 4.35
2819 3186 0.936764 CCTCGGATTCGATGCGTCAG 60.937 60.000 6.75 0.00 45.04 3.51
2820 3187 0.936764 CTCGGATTCGATGCGTCAGG 60.937 60.000 6.75 0.00 45.04 3.86
2821 3188 1.226974 CGGATTCGATGCGTCAGGT 60.227 57.895 6.75 0.00 39.38 4.00
2822 3189 1.482621 CGGATTCGATGCGTCAGGTG 61.483 60.000 6.75 0.00 39.38 4.00
2823 3190 0.460284 GGATTCGATGCGTCAGGTGT 60.460 55.000 6.75 0.00 0.00 4.16
2824 3191 0.924090 GATTCGATGCGTCAGGTGTC 59.076 55.000 6.75 0.00 0.00 3.67
2825 3192 0.532573 ATTCGATGCGTCAGGTGTCT 59.467 50.000 6.75 0.00 0.00 3.41
2826 3193 0.388520 TTCGATGCGTCAGGTGTCTG 60.389 55.000 6.75 0.00 42.21 3.51
2827 3194 2.447887 CGATGCGTCAGGTGTCTGC 61.448 63.158 6.75 0.00 40.69 4.26
2828 3195 2.046892 ATGCGTCAGGTGTCTGCC 60.047 61.111 0.00 0.00 40.69 4.85
2829 3196 2.786539 GATGCGTCAGGTGTCTGCCA 62.787 60.000 0.00 0.00 40.69 4.92
2830 3197 2.740055 GCGTCAGGTGTCTGCCAG 60.740 66.667 0.00 0.00 40.69 4.85
2831 3198 2.737180 CGTCAGGTGTCTGCCAGT 59.263 61.111 0.00 0.00 40.69 4.00
2832 3199 1.069765 CGTCAGGTGTCTGCCAGTT 59.930 57.895 0.00 0.00 40.69 3.16
2833 3200 0.317160 CGTCAGGTGTCTGCCAGTTA 59.683 55.000 0.00 0.00 40.69 2.24
2834 3201 1.066858 CGTCAGGTGTCTGCCAGTTAT 60.067 52.381 0.00 0.00 40.69 1.89
2835 3202 2.612972 CGTCAGGTGTCTGCCAGTTATT 60.613 50.000 0.00 0.00 40.69 1.40
2836 3203 3.003480 GTCAGGTGTCTGCCAGTTATTC 58.997 50.000 0.00 0.00 40.69 1.75
2837 3204 2.002586 CAGGTGTCTGCCAGTTATTCG 58.997 52.381 0.00 0.00 33.86 3.34
2838 3205 1.623811 AGGTGTCTGCCAGTTATTCGT 59.376 47.619 0.00 0.00 0.00 3.85
2839 3206 2.000447 GGTGTCTGCCAGTTATTCGTC 59.000 52.381 0.00 0.00 0.00 4.20
2840 3207 1.654105 GTGTCTGCCAGTTATTCGTCG 59.346 52.381 0.00 0.00 0.00 5.12
2841 3208 1.278238 GTCTGCCAGTTATTCGTCGG 58.722 55.000 0.00 0.00 0.00 4.79
2842 3209 0.892755 TCTGCCAGTTATTCGTCGGT 59.107 50.000 0.00 0.00 0.00 4.69
2843 3210 0.999406 CTGCCAGTTATTCGTCGGTG 59.001 55.000 0.00 0.00 0.00 4.94
2844 3211 0.319083 TGCCAGTTATTCGTCGGTGT 59.681 50.000 0.00 0.00 0.00 4.16
2845 3212 1.270412 TGCCAGTTATTCGTCGGTGTT 60.270 47.619 0.00 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 8.802267 CAAAGGATTTTATAGGGTGTTTGAAGA 58.198 33.333 0.00 0.00 35.03 2.87
14 15 8.893563 TGATTCAAAGGATTTTATAGGGTGTT 57.106 30.769 0.00 0.00 35.03 3.32
16 17 9.807649 CTTTGATTCAAAGGATTTTATAGGGTG 57.192 33.333 25.14 1.53 44.75 4.61
61 63 7.789273 TTTGCATGAAAATTGTCAAGAACAT 57.211 28.000 1.55 0.00 37.82 2.71
77 79 3.401182 GCAACCATTCCTTTTTGCATGA 58.599 40.909 0.00 0.00 43.16 3.07
120 122 4.337763 CATTTGTAGAGCATCGACTTTGC 58.662 43.478 1.15 1.15 41.62 3.68
122 124 3.375299 GGCATTTGTAGAGCATCGACTTT 59.625 43.478 0.00 0.00 41.62 2.66
129 131 5.212532 TGTTTTTGGCATTTGTAGAGCAT 57.787 34.783 0.00 0.00 0.00 3.79
143 145 2.499693 ACAAGTTGGGTCCTGTTTTTGG 59.500 45.455 7.96 0.00 0.00 3.28
207 209 7.013178 ACGTCCATATTCAAATGACATGCATAA 59.987 33.333 0.00 0.00 35.78 1.90
208 210 6.486320 ACGTCCATATTCAAATGACATGCATA 59.514 34.615 0.00 0.00 35.78 3.14
209 211 5.300034 ACGTCCATATTCAAATGACATGCAT 59.700 36.000 0.00 0.00 39.43 3.96
210 212 4.639755 ACGTCCATATTCAAATGACATGCA 59.360 37.500 0.00 0.00 0.00 3.96
211 213 5.173774 ACGTCCATATTCAAATGACATGC 57.826 39.130 0.00 0.00 0.00 4.06
212 214 7.373180 CGTAAACGTCCATATTCAAATGACATG 59.627 37.037 0.00 0.00 34.11 3.21
213 215 7.406553 CGTAAACGTCCATATTCAAATGACAT 58.593 34.615 0.00 0.00 34.11 3.06
214 216 6.767080 CGTAAACGTCCATATTCAAATGACA 58.233 36.000 0.00 0.00 34.11 3.58
264 447 6.148948 CGCCAAAATACTTTTCTGAATGTCA 58.851 36.000 0.00 0.00 0.00 3.58
265 448 5.060940 GCGCCAAAATACTTTTCTGAATGTC 59.939 40.000 0.00 0.00 0.00 3.06
266 449 4.923281 GCGCCAAAATACTTTTCTGAATGT 59.077 37.500 0.00 0.00 0.00 2.71
272 455 1.268352 TGCGCGCCAAAATACTTTTCT 59.732 42.857 30.77 0.00 0.00 2.52
273 456 1.692296 TGCGCGCCAAAATACTTTTC 58.308 45.000 30.77 0.00 0.00 2.29
302 485 7.609532 CCAGATATTAAATTTGGCTCTAGGGAG 59.390 40.741 0.00 0.00 42.18 4.30
321 504 9.224267 CGAGAAATCCACATATTTTCCAGATAT 57.776 33.333 0.00 0.00 31.25 1.63
322 505 8.210946 ACGAGAAATCCACATATTTTCCAGATA 58.789 33.333 0.00 0.00 31.25 1.98
323 506 7.056635 ACGAGAAATCCACATATTTTCCAGAT 58.943 34.615 0.00 0.00 31.25 2.90
324 507 6.414732 ACGAGAAATCCACATATTTTCCAGA 58.585 36.000 0.00 0.00 31.25 3.86
325 508 6.683974 ACGAGAAATCCACATATTTTCCAG 57.316 37.500 0.00 0.00 31.25 3.86
326 509 8.746052 ATTACGAGAAATCCACATATTTTCCA 57.254 30.769 0.00 0.00 31.25 3.53
333 516 9.976511 CCTTAGTTATTACGAGAAATCCACATA 57.023 33.333 0.00 0.00 0.00 2.29
334 517 7.931948 CCCTTAGTTATTACGAGAAATCCACAT 59.068 37.037 0.00 0.00 0.00 3.21
335 518 7.270047 CCCTTAGTTATTACGAGAAATCCACA 58.730 38.462 0.00 0.00 0.00 4.17
336 519 6.704937 CCCCTTAGTTATTACGAGAAATCCAC 59.295 42.308 0.00 0.00 0.00 4.02
337 520 6.687139 GCCCCTTAGTTATTACGAGAAATCCA 60.687 42.308 0.00 0.00 0.00 3.41
338 521 5.699915 GCCCCTTAGTTATTACGAGAAATCC 59.300 44.000 0.00 0.00 0.00 3.01
339 522 5.404667 CGCCCCTTAGTTATTACGAGAAATC 59.595 44.000 0.00 0.00 0.00 2.17
340 523 5.069516 TCGCCCCTTAGTTATTACGAGAAAT 59.930 40.000 0.00 0.00 0.00 2.17
341 524 4.402155 TCGCCCCTTAGTTATTACGAGAAA 59.598 41.667 0.00 0.00 0.00 2.52
342 525 3.953612 TCGCCCCTTAGTTATTACGAGAA 59.046 43.478 0.00 0.00 0.00 2.87
343 526 3.554934 TCGCCCCTTAGTTATTACGAGA 58.445 45.455 0.00 0.00 0.00 4.04
344 527 3.996150 TCGCCCCTTAGTTATTACGAG 57.004 47.619 0.00 0.00 0.00 4.18
345 528 3.890756 TGATCGCCCCTTAGTTATTACGA 59.109 43.478 0.00 0.00 0.00 3.43
346 529 4.247267 TGATCGCCCCTTAGTTATTACG 57.753 45.455 0.00 0.00 0.00 3.18
347 530 5.850614 TCTTGATCGCCCCTTAGTTATTAC 58.149 41.667 0.00 0.00 0.00 1.89
348 531 6.488769 TTCTTGATCGCCCCTTAGTTATTA 57.511 37.500 0.00 0.00 0.00 0.98
349 532 5.367945 TTCTTGATCGCCCCTTAGTTATT 57.632 39.130 0.00 0.00 0.00 1.40
350 533 5.130477 TCTTTCTTGATCGCCCCTTAGTTAT 59.870 40.000 0.00 0.00 0.00 1.89
351 534 4.468510 TCTTTCTTGATCGCCCCTTAGTTA 59.531 41.667 0.00 0.00 0.00 2.24
352 535 3.263425 TCTTTCTTGATCGCCCCTTAGTT 59.737 43.478 0.00 0.00 0.00 2.24
353 536 2.838202 TCTTTCTTGATCGCCCCTTAGT 59.162 45.455 0.00 0.00 0.00 2.24
354 537 3.543680 TCTTTCTTGATCGCCCCTTAG 57.456 47.619 0.00 0.00 0.00 2.18
355 538 4.407621 TGTATCTTTCTTGATCGCCCCTTA 59.592 41.667 0.00 0.00 0.00 2.69
356 539 3.199946 TGTATCTTTCTTGATCGCCCCTT 59.800 43.478 0.00 0.00 0.00 3.95
357 540 2.771943 TGTATCTTTCTTGATCGCCCCT 59.228 45.455 0.00 0.00 0.00 4.79
358 541 3.194005 TGTATCTTTCTTGATCGCCCC 57.806 47.619 0.00 0.00 0.00 5.80
359 542 4.636249 AGATGTATCTTTCTTGATCGCCC 58.364 43.478 0.00 0.00 31.97 6.13
360 543 5.988561 AGAAGATGTATCTTTCTTGATCGCC 59.011 40.000 8.41 0.00 46.47 5.54
361 544 6.145371 GGAGAAGATGTATCTTTCTTGATCGC 59.855 42.308 8.41 0.00 46.47 4.58
362 545 7.432869 AGGAGAAGATGTATCTTTCTTGATCG 58.567 38.462 8.41 0.00 46.47 3.69
368 551 9.206690 TGTGAATAGGAGAAGATGTATCTTTCT 57.793 33.333 8.41 7.24 46.47 2.52
369 552 9.255304 GTGTGAATAGGAGAAGATGTATCTTTC 57.745 37.037 8.41 7.92 46.47 2.62
370 553 8.762645 TGTGTGAATAGGAGAAGATGTATCTTT 58.237 33.333 8.41 0.14 46.47 2.52
372 555 7.904558 TGTGTGAATAGGAGAAGATGTATCT 57.095 36.000 0.00 0.00 39.22 1.98
373 556 9.553064 AAATGTGTGAATAGGAGAAGATGTATC 57.447 33.333 0.00 0.00 0.00 2.24
374 557 9.911788 AAAATGTGTGAATAGGAGAAGATGTAT 57.088 29.630 0.00 0.00 0.00 2.29
375 558 9.166173 CAAAATGTGTGAATAGGAGAAGATGTA 57.834 33.333 0.00 0.00 0.00 2.29
376 559 7.667219 ACAAAATGTGTGAATAGGAGAAGATGT 59.333 33.333 0.00 0.00 39.72 3.06
377 560 8.048534 ACAAAATGTGTGAATAGGAGAAGATG 57.951 34.615 0.00 0.00 39.72 2.90
378 561 9.388506 CTACAAAATGTGTGAATAGGAGAAGAT 57.611 33.333 0.00 0.00 41.89 2.40
379 562 8.375506 ACTACAAAATGTGTGAATAGGAGAAGA 58.624 33.333 0.00 0.00 41.89 2.87
380 563 8.553459 ACTACAAAATGTGTGAATAGGAGAAG 57.447 34.615 0.00 0.00 41.89 2.85
381 564 8.918202 AACTACAAAATGTGTGAATAGGAGAA 57.082 30.769 0.00 0.00 41.89 2.87
382 565 8.918202 AAACTACAAAATGTGTGAATAGGAGA 57.082 30.769 0.00 0.00 41.89 3.71
388 571 9.912634 CTCCATTAAACTACAAAATGTGTGAAT 57.087 29.630 0.00 0.00 41.89 2.57
389 572 8.908903 ACTCCATTAAACTACAAAATGTGTGAA 58.091 29.630 0.00 0.00 41.89 3.18
390 573 8.458573 ACTCCATTAAACTACAAAATGTGTGA 57.541 30.769 0.00 0.00 41.89 3.58
391 574 8.349245 TGACTCCATTAAACTACAAAATGTGTG 58.651 33.333 0.00 0.00 41.89 3.82
392 575 8.349983 GTGACTCCATTAAACTACAAAATGTGT 58.650 33.333 0.00 0.00 44.82 3.72
393 576 7.807907 GGTGACTCCATTAAACTACAAAATGTG 59.192 37.037 0.00 0.00 35.97 3.21
394 577 7.308348 CGGTGACTCCATTAAACTACAAAATGT 60.308 37.037 0.00 0.00 35.57 2.71
395 578 7.021196 CGGTGACTCCATTAAACTACAAAATG 58.979 38.462 0.00 0.00 35.57 2.32
396 579 6.713450 ACGGTGACTCCATTAAACTACAAAAT 59.287 34.615 0.00 0.00 35.57 1.82
397 580 6.056884 ACGGTGACTCCATTAAACTACAAAA 58.943 36.000 0.00 0.00 35.57 2.44
398 581 5.613329 ACGGTGACTCCATTAAACTACAAA 58.387 37.500 0.00 0.00 35.57 2.83
399 582 5.217978 ACGGTGACTCCATTAAACTACAA 57.782 39.130 0.00 0.00 35.57 2.41
400 583 4.877378 ACGGTGACTCCATTAAACTACA 57.123 40.909 0.00 0.00 35.57 2.74
401 584 7.710896 ACTATACGGTGACTCCATTAAACTAC 58.289 38.462 0.00 0.00 35.57 2.73
402 585 7.886629 ACTATACGGTGACTCCATTAAACTA 57.113 36.000 0.00 0.00 35.57 2.24
403 586 6.786967 ACTATACGGTGACTCCATTAAACT 57.213 37.500 0.00 0.00 35.57 2.66
404 587 7.838771 AAACTATACGGTGACTCCATTAAAC 57.161 36.000 0.00 0.00 35.57 2.01
405 588 8.199449 CCTAAACTATACGGTGACTCCATTAAA 58.801 37.037 0.00 0.00 35.57 1.52
406 589 7.560991 TCCTAAACTATACGGTGACTCCATTAA 59.439 37.037 0.00 0.00 35.57 1.40
407 590 7.062322 TCCTAAACTATACGGTGACTCCATTA 58.938 38.462 0.00 0.00 35.57 1.90
408 591 5.895534 TCCTAAACTATACGGTGACTCCATT 59.104 40.000 0.00 0.00 35.57 3.16
409 592 5.452255 TCCTAAACTATACGGTGACTCCAT 58.548 41.667 0.00 0.00 35.57 3.41
410 593 4.858850 TCCTAAACTATACGGTGACTCCA 58.141 43.478 0.00 0.00 35.57 3.86
411 594 4.261530 GCTCCTAAACTATACGGTGACTCC 60.262 50.000 0.00 0.00 0.00 3.85
412 595 4.337555 TGCTCCTAAACTATACGGTGACTC 59.662 45.833 0.00 0.00 0.00 3.36
413 596 4.097589 GTGCTCCTAAACTATACGGTGACT 59.902 45.833 0.00 0.00 0.00 3.41
414 597 4.357996 GTGCTCCTAAACTATACGGTGAC 58.642 47.826 0.00 0.00 0.00 3.67
415 598 3.065786 CGTGCTCCTAAACTATACGGTGA 59.934 47.826 0.00 0.00 0.00 4.02
416 599 3.369385 CGTGCTCCTAAACTATACGGTG 58.631 50.000 0.00 0.00 0.00 4.94
417 600 2.223665 GCGTGCTCCTAAACTATACGGT 60.224 50.000 0.00 0.00 0.00 4.83
418 601 2.223641 TGCGTGCTCCTAAACTATACGG 60.224 50.000 0.00 0.00 0.00 4.02
419 602 3.074504 TGCGTGCTCCTAAACTATACG 57.925 47.619 0.00 0.00 0.00 3.06
420 603 5.350640 AGTTTTGCGTGCTCCTAAACTATAC 59.649 40.000 11.73 0.00 37.30 1.47
421 604 5.484715 AGTTTTGCGTGCTCCTAAACTATA 58.515 37.500 11.73 0.00 37.30 1.31
422 605 4.324267 AGTTTTGCGTGCTCCTAAACTAT 58.676 39.130 11.73 0.00 37.30 2.12
423 606 3.735591 AGTTTTGCGTGCTCCTAAACTA 58.264 40.909 11.73 0.00 37.30 2.24
424 607 2.572290 AGTTTTGCGTGCTCCTAAACT 58.428 42.857 0.00 0.00 35.01 2.66
425 608 4.216731 GTTAGTTTTGCGTGCTCCTAAAC 58.783 43.478 0.00 0.00 0.00 2.01
426 609 3.251487 GGTTAGTTTTGCGTGCTCCTAAA 59.749 43.478 0.00 0.00 0.00 1.85
427 610 2.809696 GGTTAGTTTTGCGTGCTCCTAA 59.190 45.455 0.00 0.00 0.00 2.69
428 611 2.419667 GGTTAGTTTTGCGTGCTCCTA 58.580 47.619 0.00 0.00 0.00 2.94
429 612 1.235724 GGTTAGTTTTGCGTGCTCCT 58.764 50.000 0.00 0.00 0.00 3.69
430 613 0.110373 CGGTTAGTTTTGCGTGCTCC 60.110 55.000 0.00 0.00 0.00 4.70
431 614 0.584876 ACGGTTAGTTTTGCGTGCTC 59.415 50.000 0.00 0.00 0.00 4.26
432 615 1.018910 AACGGTTAGTTTTGCGTGCT 58.981 45.000 0.00 0.00 40.88 4.40
433 616 2.221517 TCTAACGGTTAGTTTTGCGTGC 59.778 45.455 23.27 0.00 43.86 5.34
434 617 3.737266 TCTCTAACGGTTAGTTTTGCGTG 59.263 43.478 23.27 8.36 43.86 5.34
435 618 3.981211 TCTCTAACGGTTAGTTTTGCGT 58.019 40.909 23.27 0.00 43.86 5.24
436 619 6.089820 TGTTATCTCTAACGGTTAGTTTTGCG 59.910 38.462 23.27 9.50 43.86 4.85
437 620 7.355332 TGTTATCTCTAACGGTTAGTTTTGC 57.645 36.000 23.27 13.02 43.86 3.68
438 621 9.968743 GAATGTTATCTCTAACGGTTAGTTTTG 57.031 33.333 23.27 13.94 43.86 2.44
439 622 9.715121 TGAATGTTATCTCTAACGGTTAGTTTT 57.285 29.630 23.27 13.38 43.86 2.43
440 623 9.715121 TTGAATGTTATCTCTAACGGTTAGTTT 57.285 29.630 23.27 13.66 43.86 2.66
441 624 9.715121 TTTGAATGTTATCTCTAACGGTTAGTT 57.285 29.630 23.27 13.94 46.36 2.24
442 625 9.148104 GTTTGAATGTTATCTCTAACGGTTAGT 57.852 33.333 23.27 10.36 40.15 2.24
443 626 9.146984 TGTTTGAATGTTATCTCTAACGGTTAG 57.853 33.333 19.49 19.49 40.15 2.34
444 627 9.661563 ATGTTTGAATGTTATCTCTAACGGTTA 57.338 29.630 0.00 0.00 40.15 2.85
445 628 7.972832 TGTTTGAATGTTATCTCTAACGGTT 57.027 32.000 0.00 0.00 40.15 4.44
446 629 9.314321 CTATGTTTGAATGTTATCTCTAACGGT 57.686 33.333 0.00 0.00 40.15 4.83
447 630 9.314321 ACTATGTTTGAATGTTATCTCTAACGG 57.686 33.333 0.00 0.00 40.15 4.44
482 665 8.988934 GCCAGAGACGATAATGAAAATACATTA 58.011 33.333 0.00 0.00 43.64 1.90
483 666 7.716998 AGCCAGAGACGATAATGAAAATACATT 59.283 33.333 0.00 0.00 42.17 2.71
484 667 7.172190 CAGCCAGAGACGATAATGAAAATACAT 59.828 37.037 0.00 0.00 0.00 2.29
485 668 6.479990 CAGCCAGAGACGATAATGAAAATACA 59.520 38.462 0.00 0.00 0.00 2.29
486 669 6.564873 GCAGCCAGAGACGATAATGAAAATAC 60.565 42.308 0.00 0.00 0.00 1.89
487 670 5.466728 GCAGCCAGAGACGATAATGAAAATA 59.533 40.000 0.00 0.00 0.00 1.40
488 671 4.274459 GCAGCCAGAGACGATAATGAAAAT 59.726 41.667 0.00 0.00 0.00 1.82
489 672 3.623060 GCAGCCAGAGACGATAATGAAAA 59.377 43.478 0.00 0.00 0.00 2.29
490 673 3.198068 GCAGCCAGAGACGATAATGAAA 58.802 45.455 0.00 0.00 0.00 2.69
491 674 2.483714 GGCAGCCAGAGACGATAATGAA 60.484 50.000 6.55 0.00 0.00 2.57
492 675 1.069204 GGCAGCCAGAGACGATAATGA 59.931 52.381 6.55 0.00 0.00 2.57
493 676 1.069823 AGGCAGCCAGAGACGATAATG 59.930 52.381 15.80 0.00 0.00 1.90
494 677 1.418334 AGGCAGCCAGAGACGATAAT 58.582 50.000 15.80 0.00 0.00 1.28
495 678 1.195115 AAGGCAGCCAGAGACGATAA 58.805 50.000 15.80 0.00 0.00 1.75
496 679 1.195115 AAAGGCAGCCAGAGACGATA 58.805 50.000 15.80 0.00 0.00 2.92
497 680 1.195115 TAAAGGCAGCCAGAGACGAT 58.805 50.000 15.80 0.00 0.00 3.73
498 681 1.137086 GATAAAGGCAGCCAGAGACGA 59.863 52.381 15.80 0.00 0.00 4.20
499 682 1.576356 GATAAAGGCAGCCAGAGACG 58.424 55.000 15.80 0.00 0.00 4.18
500 683 1.137086 TCGATAAAGGCAGCCAGAGAC 59.863 52.381 15.80 0.90 0.00 3.36
501 684 1.137086 GTCGATAAAGGCAGCCAGAGA 59.863 52.381 15.80 0.94 0.00 3.10
502 685 1.576356 GTCGATAAAGGCAGCCAGAG 58.424 55.000 15.80 0.00 0.00 3.35
503 686 0.178068 GGTCGATAAAGGCAGCCAGA 59.822 55.000 15.80 0.00 0.00 3.86
504 687 0.107703 TGGTCGATAAAGGCAGCCAG 60.108 55.000 15.80 0.00 0.00 4.85
505 688 0.107703 CTGGTCGATAAAGGCAGCCA 60.108 55.000 15.80 0.00 0.00 4.75
506 689 0.107654 ACTGGTCGATAAAGGCAGCC 60.108 55.000 1.84 1.84 0.00 4.85
507 690 1.009829 CACTGGTCGATAAAGGCAGC 58.990 55.000 0.00 0.00 0.00 5.25
508 691 2.386661 ACACTGGTCGATAAAGGCAG 57.613 50.000 0.00 0.00 0.00 4.85
509 692 2.167693 CCTACACTGGTCGATAAAGGCA 59.832 50.000 0.00 0.00 0.00 4.75
510 693 2.822764 CCTACACTGGTCGATAAAGGC 58.177 52.381 0.00 0.00 0.00 4.35
511 694 2.798499 CGCCTACACTGGTCGATAAAGG 60.798 54.545 0.00 0.00 0.00 3.11
512 695 2.460918 CGCCTACACTGGTCGATAAAG 58.539 52.381 0.00 0.00 0.00 1.85
513 696 1.135527 CCGCCTACACTGGTCGATAAA 59.864 52.381 0.00 0.00 0.00 1.40
514 697 0.742505 CCGCCTACACTGGTCGATAA 59.257 55.000 0.00 0.00 0.00 1.75
515 698 1.731433 GCCGCCTACACTGGTCGATA 61.731 60.000 0.00 0.00 0.00 2.92
516 699 3.077519 GCCGCCTACACTGGTCGAT 62.078 63.158 0.00 0.00 0.00 3.59
517 700 3.755628 GCCGCCTACACTGGTCGA 61.756 66.667 0.00 0.00 0.00 4.20
518 701 4.063967 TGCCGCCTACACTGGTCG 62.064 66.667 0.00 0.00 0.00 4.79
519 702 2.434359 GTGCCGCCTACACTGGTC 60.434 66.667 0.00 0.00 35.12 4.02
520 703 4.016706 GGTGCCGCCTACACTGGT 62.017 66.667 0.00 0.00 38.14 4.00
521 704 4.778143 GGGTGCCGCCTACACTGG 62.778 72.222 0.00 0.00 38.14 4.00
522 705 1.895020 TAAGGGTGCCGCCTACACTG 61.895 60.000 0.00 0.00 38.14 3.66
523 706 1.196104 TTAAGGGTGCCGCCTACACT 61.196 55.000 0.00 0.00 38.14 3.55
524 707 0.107361 ATTAAGGGTGCCGCCTACAC 60.107 55.000 0.00 0.00 37.43 2.90
525 708 0.621609 AATTAAGGGTGCCGCCTACA 59.378 50.000 0.00 0.00 37.43 2.74
526 709 1.758936 AAATTAAGGGTGCCGCCTAC 58.241 50.000 0.00 0.00 37.43 3.18
527 710 2.517998 AAAATTAAGGGTGCCGCCTA 57.482 45.000 0.00 0.00 37.43 3.93
528 711 1.639722 AAAAATTAAGGGTGCCGCCT 58.360 45.000 0.00 0.00 37.43 5.52
581 764 3.015327 CCGTAGCTCTACCACTAGTGTT 58.985 50.000 21.18 10.30 32.61 3.32
591 774 0.803740 CGCCTATCCCGTAGCTCTAC 59.196 60.000 0.00 0.00 0.00 2.59
604 787 1.533469 GGCACGACCTATCCGCCTAT 61.533 60.000 0.00 0.00 37.09 2.57
605 788 2.198287 GGCACGACCTATCCGCCTA 61.198 63.158 0.00 0.00 37.09 3.93
606 789 3.537874 GGCACGACCTATCCGCCT 61.538 66.667 0.00 0.00 37.09 5.52
692 881 7.693533 TTACCCCTTTTCCCTAATTGTTTTT 57.306 32.000 0.00 0.00 0.00 1.94
693 882 7.690797 GCTTTACCCCTTTTCCCTAATTGTTTT 60.691 37.037 0.00 0.00 0.00 2.43
697 886 5.023452 AGCTTTACCCCTTTTCCCTAATTG 58.977 41.667 0.00 0.00 0.00 2.32
701 890 3.399983 ACAAGCTTTACCCCTTTTCCCTA 59.600 43.478 0.00 0.00 0.00 3.53
705 894 3.188667 CGAGACAAGCTTTACCCCTTTTC 59.811 47.826 0.00 0.00 0.00 2.29
709 898 1.349067 ACGAGACAAGCTTTACCCCT 58.651 50.000 0.00 0.00 0.00 4.79
725 916 2.099638 CTAGCGCACGTGCTACGA 59.900 61.111 35.27 22.49 46.05 3.43
744 935 2.535331 CGTGTTTGGTTCCAAAGGTTG 58.465 47.619 16.05 4.80 36.72 3.77
750 941 2.010582 GCCAGCGTGTTTGGTTCCAA 62.011 55.000 0.00 0.00 38.02 3.53
823 1028 7.500559 GTGTAATTAGGCCTGAGATTTGAGATT 59.499 37.037 17.99 0.00 0.00 2.40
824 1029 6.995091 GTGTAATTAGGCCTGAGATTTGAGAT 59.005 38.462 17.99 0.00 0.00 2.75
825 1030 6.349300 GTGTAATTAGGCCTGAGATTTGAGA 58.651 40.000 17.99 0.00 0.00 3.27
826 1031 5.235186 CGTGTAATTAGGCCTGAGATTTGAG 59.765 44.000 17.99 0.00 0.00 3.02
827 1032 5.105106 TCGTGTAATTAGGCCTGAGATTTGA 60.105 40.000 17.99 1.38 0.00 2.69
828 1033 5.006746 GTCGTGTAATTAGGCCTGAGATTTG 59.993 44.000 17.99 0.00 0.00 2.32
829 1034 5.104900 AGTCGTGTAATTAGGCCTGAGATTT 60.105 40.000 17.99 0.61 0.00 2.17
830 1035 4.406003 AGTCGTGTAATTAGGCCTGAGATT 59.594 41.667 17.99 14.96 0.00 2.40
831 1036 3.961408 AGTCGTGTAATTAGGCCTGAGAT 59.039 43.478 17.99 3.66 0.00 2.75
832 1037 3.362706 AGTCGTGTAATTAGGCCTGAGA 58.637 45.455 17.99 0.84 0.00 3.27
846 1062 4.706035 TGGTGTTTAATACCAAGTCGTGT 58.294 39.130 11.12 0.00 44.79 4.49
855 1071 2.011947 GCTCGGGTGGTGTTTAATACC 58.988 52.381 3.83 3.83 38.71 2.73
868 1089 2.670148 GGAGGTTGATGGCTCGGGT 61.670 63.158 0.00 0.00 0.00 5.28
882 1103 1.880340 GCGATGTGAGCGAAGGAGG 60.880 63.158 0.00 0.00 0.00 4.30
886 1107 1.291184 TTGGTGCGATGTGAGCGAAG 61.291 55.000 0.00 0.00 37.44 3.79
924 1145 1.823169 CGTTTTCCCTCGGTCCTGGA 61.823 60.000 0.00 0.00 0.00 3.86
925 1146 1.375523 CGTTTTCCCTCGGTCCTGG 60.376 63.158 0.00 0.00 0.00 4.45
927 1148 2.047213 TTGCGTTTTCCCTCGGTCCT 62.047 55.000 0.00 0.00 0.00 3.85
928 1149 1.598685 TTGCGTTTTCCCTCGGTCC 60.599 57.895 0.00 0.00 0.00 4.46
930 1151 1.895231 GGTTGCGTTTTCCCTCGGT 60.895 57.895 0.00 0.00 0.00 4.69
932 1153 1.574428 CTGGTTGCGTTTTCCCTCG 59.426 57.895 0.00 0.00 0.00 4.63
933 1154 0.536460 TCCTGGTTGCGTTTTCCCTC 60.536 55.000 0.00 0.00 0.00 4.30
934 1155 0.537371 CTCCTGGTTGCGTTTTCCCT 60.537 55.000 0.00 0.00 0.00 4.20
947 1189 4.559063 CCATGGCCGAGCTCCTGG 62.559 72.222 8.47 5.65 0.00 4.45
948 1190 3.473647 TCCATGGCCGAGCTCCTG 61.474 66.667 6.96 0.26 0.00 3.86
949 1191 3.474570 GTCCATGGCCGAGCTCCT 61.475 66.667 6.96 0.00 0.00 3.69
950 1192 3.785859 TGTCCATGGCCGAGCTCC 61.786 66.667 6.96 0.00 0.00 4.70
951 1193 1.676678 TAGTGTCCATGGCCGAGCTC 61.677 60.000 6.96 2.73 0.00 4.09
952 1194 1.685765 TAGTGTCCATGGCCGAGCT 60.686 57.895 6.96 3.27 0.00 4.09
954 1196 1.226974 CGTAGTGTCCATGGCCGAG 60.227 63.158 6.96 0.00 0.00 4.63
955 1197 1.679641 TCGTAGTGTCCATGGCCGA 60.680 57.895 6.96 4.72 0.00 5.54
988 1230 4.465512 GTTCATGCCCGTGCGCTG 62.466 66.667 9.73 0.08 41.78 5.18
990 1232 4.465512 CTGTTCATGCCCGTGCGC 62.466 66.667 0.00 0.00 41.78 6.09
991 1233 3.803082 CCTGTTCATGCCCGTGCG 61.803 66.667 0.00 0.00 41.78 5.34
992 1234 3.443045 CCCTGTTCATGCCCGTGC 61.443 66.667 0.00 0.00 38.26 5.34
993 1235 2.751436 CCCCTGTTCATGCCCGTG 60.751 66.667 0.00 0.00 0.00 4.94
994 1236 4.740822 GCCCCTGTTCATGCCCGT 62.741 66.667 0.00 0.00 0.00 5.28
996 1238 4.740822 ACGCCCCTGTTCATGCCC 62.741 66.667 0.00 0.00 0.00 5.36
997 1239 3.443045 CACGCCCCTGTTCATGCC 61.443 66.667 0.00 0.00 0.00 4.40
998 1240 4.120331 GCACGCCCCTGTTCATGC 62.120 66.667 0.00 0.00 0.00 4.06
999 1241 3.443045 GGCACGCCCCTGTTCATG 61.443 66.667 0.00 0.00 0.00 3.07
1759 2004 0.752376 GACCCTCCGATCTCGAACCT 60.752 60.000 0.22 0.00 43.02 3.50
1801 2070 2.254651 GCAGAACTCGTCGTCGGT 59.745 61.111 1.55 0.00 37.69 4.69
1886 2155 3.757270 TGAGACTAAATCCCCGCAAAAA 58.243 40.909 0.00 0.00 0.00 1.94
1887 2156 3.426787 TGAGACTAAATCCCCGCAAAA 57.573 42.857 0.00 0.00 0.00 2.44
1888 2157 3.199946 AGATGAGACTAAATCCCCGCAAA 59.800 43.478 0.00 0.00 0.00 3.68
1889 2158 2.771943 AGATGAGACTAAATCCCCGCAA 59.228 45.455 0.00 0.00 0.00 4.85
1890 2159 2.398588 AGATGAGACTAAATCCCCGCA 58.601 47.619 0.00 0.00 0.00 5.69
1891 2160 3.134458 CAAGATGAGACTAAATCCCCGC 58.866 50.000 0.00 0.00 0.00 6.13
1892 2161 3.134804 ACCAAGATGAGACTAAATCCCCG 59.865 47.826 0.00 0.00 0.00 5.73
1893 2162 4.080299 ACACCAAGATGAGACTAAATCCCC 60.080 45.833 0.00 0.00 0.00 4.81
1894 2163 5.104259 ACACCAAGATGAGACTAAATCCC 57.896 43.478 0.00 0.00 0.00 3.85
1895 2164 6.049790 GGTACACCAAGATGAGACTAAATCC 58.950 44.000 0.00 0.00 35.64 3.01
1896 2165 6.049790 GGGTACACCAAGATGAGACTAAATC 58.950 44.000 0.00 0.00 39.85 2.17
1897 2166 5.395324 CGGGTACACCAAGATGAGACTAAAT 60.395 44.000 0.00 0.00 40.22 1.40
1898 2167 4.081862 CGGGTACACCAAGATGAGACTAAA 60.082 45.833 0.00 0.00 40.22 1.85
1899 2168 3.446161 CGGGTACACCAAGATGAGACTAA 59.554 47.826 0.00 0.00 40.22 2.24
1927 2196 1.004398 TCAAGTTTTGTGCTACGCGTG 60.004 47.619 24.59 13.17 0.00 5.34
1994 2286 6.189385 ACACACAGTGATCGCAATCGAATG 62.189 45.833 7.81 0.00 41.55 2.67
2010 2302 1.794701 CTCACGACAATCCACACACAG 59.205 52.381 0.00 0.00 0.00 3.66
2012 2304 1.526887 CACTCACGACAATCCACACAC 59.473 52.381 0.00 0.00 0.00 3.82
2013 2305 1.410882 TCACTCACGACAATCCACACA 59.589 47.619 0.00 0.00 0.00 3.72
2014 2306 2.148916 TCACTCACGACAATCCACAC 57.851 50.000 0.00 0.00 0.00 3.82
2015 2307 2.612721 CCATCACTCACGACAATCCACA 60.613 50.000 0.00 0.00 0.00 4.17
2016 2308 2.002586 CCATCACTCACGACAATCCAC 58.997 52.381 0.00 0.00 0.00 4.02
2017 2309 1.066215 CCCATCACTCACGACAATCCA 60.066 52.381 0.00 0.00 0.00 3.41
2018 2310 1.066143 ACCCATCACTCACGACAATCC 60.066 52.381 0.00 0.00 0.00 3.01
2031 2326 3.449737 CCTTCCTAAACGTAGACCCATCA 59.550 47.826 0.00 0.00 0.00 3.07
2041 2336 4.152938 GTGCGTAAATTCCTTCCTAAACGT 59.847 41.667 0.00 0.00 0.00 3.99
2059 2354 1.292061 ACAAATGTACACACGTGCGT 58.708 45.000 17.22 15.70 0.00 5.24
2060 2355 2.376915 AACAAATGTACACACGTGCG 57.623 45.000 17.22 9.16 0.00 5.34
2061 2356 3.430931 ACAAACAAATGTACACACGTGC 58.569 40.909 17.22 0.00 0.00 5.34
2062 2357 4.904116 AGACAAACAAATGTACACACGTG 58.096 39.130 15.48 15.48 32.57 4.49
2081 2376 3.129871 AGTATCCACTACGTAGCGAGAC 58.870 50.000 22.40 21.90 35.35 3.36
2082 2377 3.465742 AGTATCCACTACGTAGCGAGA 57.534 47.619 22.40 15.97 35.35 4.04
2083 2378 3.059051 GGAAGTATCCACTACGTAGCGAG 60.059 52.174 22.40 12.22 45.79 5.03
2084 2379 2.874701 GGAAGTATCCACTACGTAGCGA 59.125 50.000 22.40 17.49 45.79 4.93
2085 2380 3.265070 GGAAGTATCCACTACGTAGCG 57.735 52.381 22.40 13.13 45.79 4.26
2096 2391 9.832445 TTATATTTGTGAACAGAGGAAGTATCC 57.168 33.333 0.00 0.00 46.98 2.59
2100 2395 7.550906 GCTCTTATATTTGTGAACAGAGGAAGT 59.449 37.037 0.00 0.00 0.00 3.01
2101 2396 7.550551 TGCTCTTATATTTGTGAACAGAGGAAG 59.449 37.037 0.00 0.00 0.00 3.46
2102 2397 7.394016 TGCTCTTATATTTGTGAACAGAGGAA 58.606 34.615 0.00 0.00 0.00 3.36
2103 2398 6.946340 TGCTCTTATATTTGTGAACAGAGGA 58.054 36.000 0.00 0.00 0.00 3.71
2104 2399 7.335422 AGTTGCTCTTATATTTGTGAACAGAGG 59.665 37.037 0.00 0.00 0.00 3.69
2105 2400 8.261492 AGTTGCTCTTATATTTGTGAACAGAG 57.739 34.615 0.00 0.00 0.00 3.35
2106 2401 7.334421 GGAGTTGCTCTTATATTTGTGAACAGA 59.666 37.037 0.00 0.00 0.00 3.41
2107 2402 7.119699 TGGAGTTGCTCTTATATTTGTGAACAG 59.880 37.037 0.00 0.00 0.00 3.16
2108 2403 6.939730 TGGAGTTGCTCTTATATTTGTGAACA 59.060 34.615 0.00 0.00 0.00 3.18
2109 2404 7.377766 TGGAGTTGCTCTTATATTTGTGAAC 57.622 36.000 0.00 0.00 0.00 3.18
2110 2405 7.994425 TTGGAGTTGCTCTTATATTTGTGAA 57.006 32.000 0.00 0.00 0.00 3.18
2111 2406 7.828717 TCATTGGAGTTGCTCTTATATTTGTGA 59.171 33.333 0.00 0.00 0.00 3.58
2112 2407 7.988737 TCATTGGAGTTGCTCTTATATTTGTG 58.011 34.615 0.00 0.00 0.00 3.33
2113 2408 7.201767 GCTCATTGGAGTTGCTCTTATATTTGT 60.202 37.037 0.00 0.00 43.37 2.83
2114 2409 7.137426 GCTCATTGGAGTTGCTCTTATATTTG 58.863 38.462 0.00 0.00 43.37 2.32
2115 2410 6.264067 GGCTCATTGGAGTTGCTCTTATATTT 59.736 38.462 0.00 0.00 43.37 1.40
2116 2411 5.767168 GGCTCATTGGAGTTGCTCTTATATT 59.233 40.000 0.00 0.00 43.37 1.28
2117 2412 5.312079 GGCTCATTGGAGTTGCTCTTATAT 58.688 41.667 0.00 0.00 43.37 0.86
2118 2413 4.708177 GGCTCATTGGAGTTGCTCTTATA 58.292 43.478 0.00 0.00 43.37 0.98
2119 2414 3.549794 GGCTCATTGGAGTTGCTCTTAT 58.450 45.455 0.00 0.00 43.37 1.73
2157 2452 4.922719 ACGAACAAAAAGCGGACAAAATA 58.077 34.783 0.00 0.00 0.00 1.40
2176 2471 4.668118 GACGGCCGACCCAAACGA 62.668 66.667 35.90 0.00 0.00 3.85
2196 2491 1.540267 GTTCGCCTCATATCCGCTAGA 59.460 52.381 0.00 0.00 0.00 2.43
2227 2522 2.031163 GCGTTGGGAGCAGTCACT 59.969 61.111 0.00 0.00 34.19 3.41
2289 2584 1.662044 GGTGGCTGCAAAGGAGTTG 59.338 57.895 0.50 0.00 40.50 3.16
2297 2592 2.356278 GAGATGGGGTGGCTGCAA 59.644 61.111 0.50 0.00 0.00 4.08
2305 2600 0.978146 CGAGGAAGTGGAGATGGGGT 60.978 60.000 0.00 0.00 0.00 4.95
2316 2611 4.379243 CAGCACCGCCGAGGAAGT 62.379 66.667 3.89 0.00 45.00 3.01
2368 2663 1.153127 CGGCGAGGAGTAGAGGAGT 60.153 63.158 0.00 0.00 0.00 3.85
2483 2789 4.067512 AGCTGGAGGAGGAGCGGA 62.068 66.667 0.00 0.00 40.34 5.54
2485 2791 4.527583 GCAGCTGGAGGAGGAGCG 62.528 72.222 17.12 0.00 40.34 5.03
2489 2795 2.108566 CGATGCAGCTGGAGGAGG 59.891 66.667 17.12 0.00 0.00 4.30
2490 2796 2.588314 GCGATGCAGCTGGAGGAG 60.588 66.667 17.12 9.32 0.00 3.69
2491 2797 4.166888 GGCGATGCAGCTGGAGGA 62.167 66.667 17.12 0.00 37.29 3.71
2500 2806 3.785859 GAGTGGAGGGGCGATGCA 61.786 66.667 0.00 0.00 0.00 3.96
2503 2809 2.444895 GAGGAGTGGAGGGGCGAT 60.445 66.667 0.00 0.00 0.00 4.58
2619 2986 3.077359 CGATCCAAAGGAAGAAGCACTT 58.923 45.455 0.00 0.00 42.03 3.16
2622 2989 1.351017 ACCGATCCAAAGGAAGAAGCA 59.649 47.619 0.00 0.00 34.34 3.91
2750 3117 0.459237 CTTCAGCGCCGACAAGATCT 60.459 55.000 2.29 0.00 0.00 2.75
2793 3160 2.182496 TCGAATCCGAGGCGTTACA 58.818 52.632 0.00 0.00 40.30 2.41
2803 3170 1.226974 ACCTGACGCATCGAATCCG 60.227 57.895 0.00 0.00 37.07 4.18
2804 3171 0.460284 ACACCTGACGCATCGAATCC 60.460 55.000 0.00 0.00 0.00 3.01
2805 3172 0.924090 GACACCTGACGCATCGAATC 59.076 55.000 0.00 0.00 0.00 2.52
2806 3173 0.532573 AGACACCTGACGCATCGAAT 59.467 50.000 0.00 0.00 0.00 3.34
2807 3174 0.388520 CAGACACCTGACGCATCGAA 60.389 55.000 0.00 0.00 43.02 3.71
2808 3175 1.212751 CAGACACCTGACGCATCGA 59.787 57.895 0.00 0.00 43.02 3.59
2809 3176 2.447887 GCAGACACCTGACGCATCG 61.448 63.158 0.00 0.00 43.02 3.84
2810 3177 2.103042 GGCAGACACCTGACGCATC 61.103 63.158 0.00 0.00 43.02 3.91
2811 3178 2.046892 GGCAGACACCTGACGCAT 60.047 61.111 0.00 0.00 43.02 4.73
2816 3183 2.353704 CGAATAACTGGCAGACACCTGA 60.354 50.000 23.66 0.00 43.02 3.86
2817 3184 2.002586 CGAATAACTGGCAGACACCTG 58.997 52.381 23.66 2.78 43.22 4.00
2818 3185 1.623811 ACGAATAACTGGCAGACACCT 59.376 47.619 23.66 0.74 0.00 4.00
2819 3186 2.000447 GACGAATAACTGGCAGACACC 59.000 52.381 23.66 5.14 0.00 4.16
2820 3187 1.654105 CGACGAATAACTGGCAGACAC 59.346 52.381 23.66 6.68 0.00 3.67
2821 3188 1.403647 CCGACGAATAACTGGCAGACA 60.404 52.381 23.66 8.46 0.00 3.41
2822 3189 1.278238 CCGACGAATAACTGGCAGAC 58.722 55.000 23.66 5.99 0.00 3.51
2823 3190 0.892755 ACCGACGAATAACTGGCAGA 59.107 50.000 23.66 0.00 0.00 4.26
2824 3191 0.999406 CACCGACGAATAACTGGCAG 59.001 55.000 14.16 14.16 0.00 4.85
2825 3192 0.319083 ACACCGACGAATAACTGGCA 59.681 50.000 0.00 0.00 0.00 4.92
2826 3193 1.435577 AACACCGACGAATAACTGGC 58.564 50.000 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.