Multiple sequence alignment - TraesCS5B01G329200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G329200 chr5B 100.000 2340 0 0 1 2340 513324594 513326933 0.000000e+00 4322.0
1 TraesCS5B01G329200 chr5B 100.000 41 0 0 2050 2090 513326594 513326634 2.490000e-10 76.8
2 TraesCS5B01G329200 chr5B 100.000 41 0 0 2001 2041 513326643 513326683 2.490000e-10 76.8
3 TraesCS5B01G329200 chr5A 88.956 1820 110 41 1 1752 538001406 538003202 0.000000e+00 2163.0
4 TraesCS5B01G329200 chr5A 92.754 138 9 1 2204 2340 520118733 520118870 5.100000e-47 198.0
5 TraesCS5B01G329200 chr5A 86.184 152 16 4 1 149 538001362 538001511 2.410000e-35 159.0
6 TraesCS5B01G329200 chr5A 94.545 55 3 0 2151 2205 520118643 520118697 4.140000e-13 86.1
7 TraesCS5B01G329200 chr5D 89.092 1806 104 39 2 1752 424224195 424225962 0.000000e+00 2158.0
8 TraesCS5B01G329200 chr5D 87.000 100 7 4 1 94 424224101 424224200 8.840000e-20 108.0
9 TraesCS5B01G329200 chr4B 92.029 138 10 1 2204 2340 607353564 607353701 2.370000e-45 193.0
10 TraesCS5B01G329200 chr3B 89.855 138 13 1 2204 2340 738689797 738689934 2.390000e-40 176.0
11 TraesCS5B01G329200 chr3B 94.545 55 3 0 2151 2205 738689707 738689761 4.140000e-13 86.1
12 TraesCS5B01G329200 chr7A 85.714 112 10 4 1903 2009 19821279 19821169 1.900000e-21 113.0
13 TraesCS5B01G329200 chr2B 84.848 99 9 2 1903 1996 4710474 4710377 6.880000e-16 95.3
14 TraesCS5B01G329200 chr2B 94.545 55 3 0 2151 2205 43070319 43070373 4.140000e-13 86.1
15 TraesCS5B01G329200 chr2B 92.727 55 4 0 2151 2205 43072209 43072155 1.930000e-11 80.5
16 TraesCS5B01G329200 chr3A 96.078 51 2 0 2151 2201 382362419 382362369 1.490000e-12 84.2
17 TraesCS5B01G329200 chr1B 96.078 51 2 0 2151 2201 61316926 61316876 1.490000e-12 84.2
18 TraesCS5B01G329200 chr4D 94.340 53 3 0 2153 2205 97964720 97964772 5.360000e-12 82.4
19 TraesCS5B01G329200 chr2D 91.525 59 5 0 2147 2205 292293618 292293560 5.360000e-12 82.4
20 TraesCS5B01G329200 chr6B 92.857 56 3 1 2147 2201 63738952 63738897 1.930000e-11 80.5
21 TraesCS5B01G329200 chrUn 90.909 44 4 0 1098 1141 105571573 105571530 2.510000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G329200 chr5B 513324594 513326933 2339 False 1491.866667 4322 100.000 1 2340 3 chr5B.!!$F1 2339
1 TraesCS5B01G329200 chr5A 538001362 538003202 1840 False 1161.000000 2163 87.570 1 1752 2 chr5A.!!$F2 1751
2 TraesCS5B01G329200 chr5D 424224101 424225962 1861 False 1133.000000 2158 88.046 1 1752 2 chr5D.!!$F1 1751

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
589 692 0.526524 CGAGACCTCCACGCTGAATC 60.527 60.0 0.0 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1871 2043 0.03213 GTTAGAGCGATCCGATGGCA 59.968 55.0 16.6 0.0 36.36 4.92 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 154 1.823041 GTAGTCGGCGGGTAGAGCT 60.823 63.158 7.21 0.00 34.52 4.09
61 155 1.525535 TAGTCGGCGGGTAGAGCTC 60.526 63.158 5.27 5.27 34.52 4.09
69 163 1.823295 GGGTAGAGCTCGATTGCCA 59.177 57.895 8.37 0.00 0.00 4.92
73 173 1.035923 TAGAGCTCGATTGCCAGAGG 58.964 55.000 8.37 0.00 35.19 3.69
111 211 0.533085 GCGGGTAGAGCCAGATTTCC 60.533 60.000 0.00 0.00 39.65 3.13
119 219 2.409870 GCCAGATTTCCAGGGCACG 61.410 63.158 0.00 0.00 45.70 5.34
149 249 1.000396 AGGTTAGTCGGCGGGTAGT 60.000 57.895 7.21 0.00 0.00 2.73
154 254 0.546122 TAGTCGGCGGGTAGTTAGGA 59.454 55.000 7.21 0.00 0.00 2.94
177 277 1.867615 CGAGGTAGTAGATCGGCGG 59.132 63.158 7.21 0.00 32.93 6.13
310 410 2.602676 ATCACGGTGGGGGTCAAGG 61.603 63.158 8.50 0.00 0.00 3.61
367 467 0.958091 CTCTCGGGCCAGTATCTCAG 59.042 60.000 4.39 0.00 0.00 3.35
381 481 1.159285 TCTCAGTCAAATGGCTTGCG 58.841 50.000 0.00 0.00 34.76 4.85
382 482 0.877071 CTCAGTCAAATGGCTTGCGT 59.123 50.000 0.00 0.00 34.76 5.24
419 519 4.515191 ACACATGTAATTTCGTTCACTGCT 59.485 37.500 0.00 0.00 0.00 4.24
474 576 4.993705 TTGCCGGAGATTATTAGGGAAT 57.006 40.909 5.05 0.00 0.00 3.01
475 577 4.993705 TGCCGGAGATTATTAGGGAATT 57.006 40.909 5.05 0.00 0.00 2.17
494 596 1.596603 TGGAGGAATACGCATGCATG 58.403 50.000 22.70 22.70 0.00 4.06
499 601 0.946528 GAATACGCATGCATGGCTCA 59.053 50.000 27.34 10.44 0.00 4.26
522 624 2.418609 GCCAAGTTTTTGTCTGGCTTGT 60.419 45.455 4.70 0.00 39.18 3.16
579 682 2.125350 CAGCCTTGCGAGACCTCC 60.125 66.667 1.22 0.00 0.00 4.30
580 683 2.604686 AGCCTTGCGAGACCTCCA 60.605 61.111 1.22 0.00 0.00 3.86
581 684 2.435059 GCCTTGCGAGACCTCCAC 60.435 66.667 1.22 0.00 0.00 4.02
582 685 2.125912 CCTTGCGAGACCTCCACG 60.126 66.667 1.22 0.00 0.00 4.94
587 690 2.962569 CGAGACCTCCACGCTGAA 59.037 61.111 0.00 0.00 0.00 3.02
588 691 1.513158 CGAGACCTCCACGCTGAAT 59.487 57.895 0.00 0.00 0.00 2.57
589 692 0.526524 CGAGACCTCCACGCTGAATC 60.527 60.000 0.00 0.00 0.00 2.52
609 712 0.597568 CTTTTTGCGACCAGGCATGA 59.402 50.000 0.00 0.00 43.52 3.07
613 716 0.955428 TTGCGACCAGGCATGAACTC 60.955 55.000 0.00 0.00 43.52 3.01
636 739 5.745769 TCGAGAGTTTTGAGATCATTGATCG 59.254 40.000 18.52 6.33 43.17 3.69
637 740 5.518128 CGAGAGTTTTGAGATCATTGATCGT 59.482 40.000 18.52 9.06 43.17 3.73
649 752 3.885901 TCATTGATCGTCTCCTAGTCCAG 59.114 47.826 0.00 0.00 0.00 3.86
693 796 5.221165 GGGAAGTTTGGTTCGAATTCTTTCA 60.221 40.000 0.00 0.00 0.00 2.69
756 862 1.495584 GACGCACGCTGAGTTGGAAA 61.496 55.000 0.00 0.00 28.29 3.13
765 871 2.227626 GCTGAGTTGGAAAAAGGAGCTC 59.772 50.000 4.71 4.71 0.00 4.09
887 998 5.011227 CCAAACTCCCTATAAGTAGAGAGCC 59.989 48.000 0.00 0.00 36.53 4.70
899 1010 3.298320 GAGAGCCTCTCTTCCTGGT 57.702 57.895 14.59 0.00 41.35 4.00
955 1067 4.706842 AGCTTGTTCCACCTAAAGAGAA 57.293 40.909 0.00 0.00 0.00 2.87
956 1068 4.390264 AGCTTGTTCCACCTAAAGAGAAC 58.610 43.478 0.00 0.00 39.22 3.01
957 1069 3.502595 GCTTGTTCCACCTAAAGAGAACC 59.497 47.826 0.00 0.00 38.24 3.62
960 1074 4.457466 TGTTCCACCTAAAGAGAACCAAC 58.543 43.478 0.00 0.00 38.24 3.77
975 1090 1.508088 CAACGGCTTTGCTCCATCC 59.492 57.895 0.00 0.00 0.00 3.51
979 1094 2.054453 GGCTTTGCTCCATCCACCC 61.054 63.158 0.00 0.00 0.00 4.61
1062 1178 1.002868 GCTGCTCCTGCTTTCCTCA 60.003 57.895 0.00 0.00 40.48 3.86
1307 1427 2.824041 CGGCCGGCTACTGCAAAT 60.824 61.111 28.56 0.00 41.91 2.32
1403 1524 4.530857 GCGCCGCCAGTCACCTAT 62.531 66.667 0.00 0.00 0.00 2.57
1404 1525 2.586079 CGCCGCCAGTCACCTATG 60.586 66.667 0.00 0.00 0.00 2.23
1405 1526 2.584608 GCCGCCAGTCACCTATGT 59.415 61.111 0.00 0.00 0.00 2.29
1406 1527 1.820581 GCCGCCAGTCACCTATGTA 59.179 57.895 0.00 0.00 0.00 2.29
1467 1606 0.179220 TGTAATAAAACGTGGCGCGC 60.179 50.000 25.94 25.94 46.11 6.86
1528 1669 1.301716 ACGCGTTGCTTCCAGTGAT 60.302 52.632 5.58 0.00 0.00 3.06
1569 1729 1.153745 GATCTCTTGCGTGCTCGGT 60.154 57.895 10.52 0.00 37.56 4.69
1592 1752 4.780815 AGCATGGAAAAATATCTCCACGA 58.219 39.130 0.00 0.00 44.42 4.35
1601 1761 7.640240 GGAAAAATATCTCCACGAAATTTCTCG 59.360 37.037 15.92 7.28 44.50 4.04
1615 1775 2.743636 TTCTCGAAATGGTTCTCGCT 57.256 45.000 0.00 0.00 35.04 4.93
1618 1778 2.029380 TCTCGAAATGGTTCTCGCTGAA 60.029 45.455 0.00 0.00 35.04 3.02
1619 1779 8.257822 ATTTCTCGAAATGGTTCTCGCTGAAC 62.258 42.308 11.10 11.10 42.00 3.18
1670 1836 4.351054 CGGCACCCTTGGAGGCTT 62.351 66.667 0.00 0.00 36.77 4.35
1692 1858 0.693767 CCTCCTCCCCTGCTCTCATT 60.694 60.000 0.00 0.00 0.00 2.57
1694 1860 1.140652 CTCCTCCCCTGCTCTCATTTC 59.859 57.143 0.00 0.00 0.00 2.17
1700 1872 2.092538 CCCCTGCTCTCATTTCAGTCAT 60.093 50.000 0.00 0.00 0.00 3.06
1735 1907 9.901724 CACTCACAGAATATTACGTCAATTAAC 57.098 33.333 0.00 0.00 0.00 2.01
1736 1908 9.647797 ACTCACAGAATATTACGTCAATTAACA 57.352 29.630 0.00 0.00 0.00 2.41
1776 1948 7.841282 TTAACCACTCAACCAAAATATTCCA 57.159 32.000 0.00 0.00 0.00 3.53
1777 1949 6.933514 AACCACTCAACCAAAATATTCCAT 57.066 33.333 0.00 0.00 0.00 3.41
1778 1950 6.530019 ACCACTCAACCAAAATATTCCATC 57.470 37.500 0.00 0.00 0.00 3.51
1779 1951 5.422012 ACCACTCAACCAAAATATTCCATCC 59.578 40.000 0.00 0.00 0.00 3.51
1780 1952 5.421693 CCACTCAACCAAAATATTCCATCCA 59.578 40.000 0.00 0.00 0.00 3.41
1781 1953 6.332630 CACTCAACCAAAATATTCCATCCAC 58.667 40.000 0.00 0.00 0.00 4.02
1782 1954 5.422012 ACTCAACCAAAATATTCCATCCACC 59.578 40.000 0.00 0.00 0.00 4.61
1783 1955 5.588845 TCAACCAAAATATTCCATCCACCT 58.411 37.500 0.00 0.00 0.00 4.00
1784 1956 6.022315 TCAACCAAAATATTCCATCCACCTT 58.978 36.000 0.00 0.00 0.00 3.50
1785 1957 6.154363 TCAACCAAAATATTCCATCCACCTTC 59.846 38.462 0.00 0.00 0.00 3.46
1786 1958 5.588845 ACCAAAATATTCCATCCACCTTCA 58.411 37.500 0.00 0.00 0.00 3.02
1787 1959 5.658190 ACCAAAATATTCCATCCACCTTCAG 59.342 40.000 0.00 0.00 0.00 3.02
1788 1960 5.069516 CCAAAATATTCCATCCACCTTCAGG 59.930 44.000 0.00 0.00 42.17 3.86
1789 1961 4.459852 AATATTCCATCCACCTTCAGGG 57.540 45.455 0.00 0.00 40.27 4.45
1811 1983 6.609237 GGTTAGACCCCGAAATTACATTAC 57.391 41.667 0.00 0.00 30.04 1.89
1812 1984 6.114767 GGTTAGACCCCGAAATTACATTACA 58.885 40.000 0.00 0.00 30.04 2.41
1813 1985 6.598850 GGTTAGACCCCGAAATTACATTACAA 59.401 38.462 0.00 0.00 30.04 2.41
1814 1986 7.121020 GGTTAGACCCCGAAATTACATTACAAA 59.879 37.037 0.00 0.00 30.04 2.83
1815 1987 8.513774 GTTAGACCCCGAAATTACATTACAAAA 58.486 33.333 0.00 0.00 0.00 2.44
1816 1988 7.527568 AGACCCCGAAATTACATTACAAAAA 57.472 32.000 0.00 0.00 0.00 1.94
1817 1989 7.372714 AGACCCCGAAATTACATTACAAAAAC 58.627 34.615 0.00 0.00 0.00 2.43
1818 1990 7.014422 AGACCCCGAAATTACATTACAAAAACA 59.986 33.333 0.00 0.00 0.00 2.83
1819 1991 7.149307 ACCCCGAAATTACATTACAAAAACAG 58.851 34.615 0.00 0.00 0.00 3.16
1820 1992 7.149307 CCCCGAAATTACATTACAAAAACAGT 58.851 34.615 0.00 0.00 0.00 3.55
1821 1993 8.298140 CCCCGAAATTACATTACAAAAACAGTA 58.702 33.333 0.00 0.00 0.00 2.74
1822 1994 9.849166 CCCGAAATTACATTACAAAAACAGTAT 57.151 29.630 0.00 0.00 0.00 2.12
1835 2007 8.863872 ACAAAAACAGTATAAAGCAGATACCT 57.136 30.769 0.00 0.00 31.27 3.08
1836 2008 9.953565 ACAAAAACAGTATAAAGCAGATACCTA 57.046 29.630 0.00 0.00 31.27 3.08
1838 2010 8.644318 AAAACAGTATAAAGCAGATACCTACG 57.356 34.615 0.00 0.00 31.27 3.51
1839 2011 7.578310 AACAGTATAAAGCAGATACCTACGA 57.422 36.000 0.00 0.00 31.27 3.43
1840 2012 6.968250 ACAGTATAAAGCAGATACCTACGAC 58.032 40.000 0.00 0.00 31.27 4.34
1841 2013 6.771749 ACAGTATAAAGCAGATACCTACGACT 59.228 38.462 0.00 0.00 31.27 4.18
1842 2014 7.935755 ACAGTATAAAGCAGATACCTACGACTA 59.064 37.037 0.00 0.00 31.27 2.59
1843 2015 8.229137 CAGTATAAAGCAGATACCTACGACTAC 58.771 40.741 0.00 0.00 31.27 2.73
1844 2016 4.548991 AAAGCAGATACCTACGACTACG 57.451 45.455 0.00 0.00 45.75 3.51
1845 2017 3.465742 AGCAGATACCTACGACTACGA 57.534 47.619 0.00 0.00 42.66 3.43
1846 2018 3.391965 AGCAGATACCTACGACTACGAG 58.608 50.000 0.00 0.00 42.66 4.18
1847 2019 2.096318 GCAGATACCTACGACTACGAGC 60.096 54.545 0.00 0.00 42.66 5.03
1848 2020 2.479656 CAGATACCTACGACTACGAGCC 59.520 54.545 0.00 0.00 42.66 4.70
1849 2021 2.368221 AGATACCTACGACTACGAGCCT 59.632 50.000 0.00 0.00 42.66 4.58
1850 2022 2.698855 TACCTACGACTACGAGCCTT 57.301 50.000 0.00 0.00 42.66 4.35
1851 2023 1.377536 ACCTACGACTACGAGCCTTC 58.622 55.000 0.00 0.00 42.66 3.46
1852 2024 1.339438 ACCTACGACTACGAGCCTTCA 60.339 52.381 0.00 0.00 42.66 3.02
1853 2025 1.063764 CCTACGACTACGAGCCTTCAC 59.936 57.143 0.00 0.00 42.66 3.18
1854 2026 1.736126 CTACGACTACGAGCCTTCACA 59.264 52.381 0.00 0.00 42.66 3.58
1855 2027 0.522180 ACGACTACGAGCCTTCACAG 59.478 55.000 0.00 0.00 42.66 3.66
1856 2028 0.798771 CGACTACGAGCCTTCACAGC 60.799 60.000 0.00 0.00 42.66 4.40
1857 2029 0.798771 GACTACGAGCCTTCACAGCG 60.799 60.000 0.00 0.00 34.64 5.18
1858 2030 1.213013 CTACGAGCCTTCACAGCGT 59.787 57.895 0.00 0.00 38.81 5.07
1859 2031 0.388649 CTACGAGCCTTCACAGCGTT 60.389 55.000 0.00 0.00 36.51 4.84
1860 2032 0.032952 TACGAGCCTTCACAGCGTTT 59.967 50.000 0.00 0.00 36.51 3.60
1861 2033 0.814010 ACGAGCCTTCACAGCGTTTT 60.814 50.000 0.00 0.00 34.64 2.43
1862 2034 0.384725 CGAGCCTTCACAGCGTTTTG 60.385 55.000 0.00 0.00 34.64 2.44
1863 2035 0.944386 GAGCCTTCACAGCGTTTTGA 59.056 50.000 0.00 0.00 34.64 2.69
1864 2036 0.947244 AGCCTTCACAGCGTTTTGAG 59.053 50.000 0.00 0.00 34.64 3.02
1865 2037 0.663153 GCCTTCACAGCGTTTTGAGT 59.337 50.000 0.00 0.00 0.00 3.41
1866 2038 1.334149 GCCTTCACAGCGTTTTGAGTC 60.334 52.381 0.00 0.00 0.00 3.36
1867 2039 1.264288 CCTTCACAGCGTTTTGAGTCC 59.736 52.381 0.00 0.00 0.00 3.85
1868 2040 1.264288 CTTCACAGCGTTTTGAGTCCC 59.736 52.381 0.00 0.00 0.00 4.46
1869 2041 0.468226 TCACAGCGTTTTGAGTCCCT 59.532 50.000 0.00 0.00 0.00 4.20
1870 2042 0.868406 CACAGCGTTTTGAGTCCCTC 59.132 55.000 0.00 0.00 0.00 4.30
1871 2043 0.759346 ACAGCGTTTTGAGTCCCTCT 59.241 50.000 0.00 0.00 0.00 3.69
1872 2044 1.151668 CAGCGTTTTGAGTCCCTCTG 58.848 55.000 0.00 0.00 0.00 3.35
1873 2045 0.603975 AGCGTTTTGAGTCCCTCTGC 60.604 55.000 0.00 0.00 0.00 4.26
1874 2046 1.578206 GCGTTTTGAGTCCCTCTGCC 61.578 60.000 0.00 0.00 0.00 4.85
1875 2047 0.250295 CGTTTTGAGTCCCTCTGCCA 60.250 55.000 0.00 0.00 0.00 4.92
1876 2048 1.611673 CGTTTTGAGTCCCTCTGCCAT 60.612 52.381 0.00 0.00 0.00 4.40
1877 2049 2.087646 GTTTTGAGTCCCTCTGCCATC 58.912 52.381 0.00 0.00 0.00 3.51
1878 2050 0.250234 TTTGAGTCCCTCTGCCATCG 59.750 55.000 0.00 0.00 0.00 3.84
1879 2051 1.617018 TTGAGTCCCTCTGCCATCGG 61.617 60.000 0.00 0.00 0.00 4.18
1880 2052 1.758514 GAGTCCCTCTGCCATCGGA 60.759 63.158 0.00 0.00 0.00 4.55
1881 2053 1.074926 AGTCCCTCTGCCATCGGAT 60.075 57.895 0.00 0.00 0.00 4.18
1882 2054 1.118356 AGTCCCTCTGCCATCGGATC 61.118 60.000 0.00 0.00 0.00 3.36
1883 2055 2.203082 TCCCTCTGCCATCGGATCG 61.203 63.158 0.00 0.00 0.00 3.69
1884 2056 2.356793 CCTCTGCCATCGGATCGC 60.357 66.667 0.25 0.25 0.00 4.58
1885 2057 2.733301 CTCTGCCATCGGATCGCT 59.267 61.111 8.98 0.00 0.00 4.93
1886 2058 1.372748 CTCTGCCATCGGATCGCTC 60.373 63.158 8.98 0.00 0.00 5.03
1887 2059 1.804396 CTCTGCCATCGGATCGCTCT 61.804 60.000 8.98 0.00 0.00 4.09
1888 2060 0.537371 TCTGCCATCGGATCGCTCTA 60.537 55.000 8.98 0.00 0.00 2.43
1889 2061 0.315251 CTGCCATCGGATCGCTCTAA 59.685 55.000 8.98 0.00 0.00 2.10
1890 2062 0.032130 TGCCATCGGATCGCTCTAAC 59.968 55.000 8.98 0.00 0.00 2.34
1891 2063 0.667792 GCCATCGGATCGCTCTAACC 60.668 60.000 0.00 0.00 0.00 2.85
1892 2064 0.962489 CCATCGGATCGCTCTAACCT 59.038 55.000 0.00 0.00 0.00 3.50
1893 2065 1.341531 CCATCGGATCGCTCTAACCTT 59.658 52.381 0.00 0.00 0.00 3.50
1894 2066 2.608261 CCATCGGATCGCTCTAACCTTC 60.608 54.545 0.00 0.00 0.00 3.46
1895 2067 1.758936 TCGGATCGCTCTAACCTTCA 58.241 50.000 0.00 0.00 0.00 3.02
1896 2068 1.404391 TCGGATCGCTCTAACCTTCAC 59.596 52.381 0.00 0.00 0.00 3.18
1897 2069 1.134367 CGGATCGCTCTAACCTTCACA 59.866 52.381 0.00 0.00 0.00 3.58
1898 2070 2.416836 CGGATCGCTCTAACCTTCACAA 60.417 50.000 0.00 0.00 0.00 3.33
1899 2071 2.930682 GGATCGCTCTAACCTTCACAAC 59.069 50.000 0.00 0.00 0.00 3.32
1900 2072 3.585862 GATCGCTCTAACCTTCACAACA 58.414 45.455 0.00 0.00 0.00 3.33
1901 2073 3.678056 TCGCTCTAACCTTCACAACAT 57.322 42.857 0.00 0.00 0.00 2.71
1902 2074 4.002906 TCGCTCTAACCTTCACAACATT 57.997 40.909 0.00 0.00 0.00 2.71
1903 2075 4.385825 TCGCTCTAACCTTCACAACATTT 58.614 39.130 0.00 0.00 0.00 2.32
1904 2076 4.819630 TCGCTCTAACCTTCACAACATTTT 59.180 37.500 0.00 0.00 0.00 1.82
1905 2077 4.911610 CGCTCTAACCTTCACAACATTTTG 59.088 41.667 0.00 0.00 38.83 2.44
1906 2078 5.277779 CGCTCTAACCTTCACAACATTTTGA 60.278 40.000 0.00 0.00 36.48 2.69
1907 2079 6.145535 GCTCTAACCTTCACAACATTTTGAG 58.854 40.000 0.00 0.00 36.48 3.02
1908 2080 6.072112 TCTAACCTTCACAACATTTTGAGC 57.928 37.500 0.00 0.00 36.48 4.26
1909 2081 3.733443 ACCTTCACAACATTTTGAGCC 57.267 42.857 0.00 0.00 36.48 4.70
1910 2082 3.299503 ACCTTCACAACATTTTGAGCCT 58.700 40.909 0.00 0.00 36.48 4.58
1911 2083 3.319122 ACCTTCACAACATTTTGAGCCTC 59.681 43.478 0.00 0.00 36.48 4.70
1912 2084 3.571401 CCTTCACAACATTTTGAGCCTCT 59.429 43.478 0.00 0.00 36.48 3.69
1913 2085 4.320788 CCTTCACAACATTTTGAGCCTCTC 60.321 45.833 0.00 0.00 36.48 3.20
1914 2086 3.819368 TCACAACATTTTGAGCCTCTCA 58.181 40.909 0.00 0.00 38.87 3.27
1915 2087 3.817084 TCACAACATTTTGAGCCTCTCAG 59.183 43.478 0.00 0.00 41.75 3.35
1916 2088 2.555757 ACAACATTTTGAGCCTCTCAGC 59.444 45.455 0.00 0.00 41.75 4.26
1917 2089 1.831580 ACATTTTGAGCCTCTCAGCC 58.168 50.000 0.00 0.00 41.75 4.85
1918 2090 0.731417 CATTTTGAGCCTCTCAGCCG 59.269 55.000 0.00 0.00 41.75 5.52
1919 2091 0.326264 ATTTTGAGCCTCTCAGCCGT 59.674 50.000 0.00 0.00 41.75 5.68
1920 2092 0.320771 TTTTGAGCCTCTCAGCCGTC 60.321 55.000 0.00 0.00 41.75 4.79
1921 2093 2.492449 TTTGAGCCTCTCAGCCGTCG 62.492 60.000 0.00 0.00 41.75 5.12
1922 2094 4.200283 GAGCCTCTCAGCCGTCGG 62.200 72.222 6.99 6.99 0.00 4.79
1923 2095 4.742649 AGCCTCTCAGCCGTCGGA 62.743 66.667 17.49 0.00 0.00 4.55
1924 2096 3.532155 GCCTCTCAGCCGTCGGAT 61.532 66.667 17.49 5.54 0.00 4.18
1925 2097 2.725008 CCTCTCAGCCGTCGGATC 59.275 66.667 17.49 0.00 0.00 3.36
1926 2098 2.329690 CTCTCAGCCGTCGGATCG 59.670 66.667 17.49 3.92 0.00 3.69
1927 2099 3.815569 CTCTCAGCCGTCGGATCGC 62.816 68.421 17.49 0.00 0.00 4.58
1928 2100 3.893763 CTCAGCCGTCGGATCGCT 61.894 66.667 17.49 0.91 0.00 4.93
1929 2101 3.815569 CTCAGCCGTCGGATCGCTC 62.816 68.421 17.49 0.00 0.00 5.03
1930 2102 3.893763 CAGCCGTCGGATCGCTCT 61.894 66.667 17.49 0.00 0.00 4.09
1931 2103 2.203167 AGCCGTCGGATCGCTCTA 60.203 61.111 17.49 0.00 0.00 2.43
1932 2104 1.822613 AGCCGTCGGATCGCTCTAA 60.823 57.895 17.49 0.00 0.00 2.10
1933 2105 1.657794 GCCGTCGGATCGCTCTAAC 60.658 63.158 17.49 0.00 0.00 2.34
1934 2106 1.368969 CCGTCGGATCGCTCTAACG 60.369 63.158 4.91 6.89 32.63 3.18
1935 2107 1.368969 CGTCGGATCGCTCTAACGG 60.369 63.158 6.21 0.00 0.00 4.44
1936 2108 1.769098 CGTCGGATCGCTCTAACGGA 61.769 60.000 6.21 0.00 0.00 4.69
1937 2109 0.316854 GTCGGATCGCTCTAACGGAC 60.317 60.000 0.00 0.00 0.00 4.79
1938 2110 1.368969 CGGATCGCTCTAACGGACG 60.369 63.158 0.00 0.00 0.00 4.79
1939 2111 1.769098 CGGATCGCTCTAACGGACGA 61.769 60.000 0.00 0.00 39.11 4.20
1941 2113 1.663445 GGATCGCTCTAACGGACGATG 60.663 57.143 1.00 0.00 44.63 3.84
1942 2114 1.002684 GATCGCTCTAACGGACGATGT 60.003 52.381 1.00 0.00 44.63 3.06
1943 2115 1.655484 TCGCTCTAACGGACGATGTA 58.345 50.000 0.00 0.00 0.00 2.29
1944 2116 1.596260 TCGCTCTAACGGACGATGTAG 59.404 52.381 0.00 0.00 0.00 2.74
1945 2117 1.596260 CGCTCTAACGGACGATGTAGA 59.404 52.381 0.00 2.14 0.00 2.59
1946 2118 2.223611 CGCTCTAACGGACGATGTAGAT 59.776 50.000 0.00 0.00 0.00 1.98
1947 2119 3.664798 CGCTCTAACGGACGATGTAGATC 60.665 52.174 0.00 0.00 0.00 2.75
1956 2128 0.598562 CGATGTAGATCGTCCCCAGG 59.401 60.000 13.78 0.00 45.43 4.45
1957 2129 1.705873 GATGTAGATCGTCCCCAGGT 58.294 55.000 0.00 0.00 0.00 4.00
1958 2130 1.614413 GATGTAGATCGTCCCCAGGTC 59.386 57.143 0.00 0.00 0.00 3.85
1959 2131 0.333652 TGTAGATCGTCCCCAGGTCA 59.666 55.000 0.00 0.00 0.00 4.02
1960 2132 1.033574 GTAGATCGTCCCCAGGTCAG 58.966 60.000 0.00 0.00 0.00 3.51
1961 2133 0.106167 TAGATCGTCCCCAGGTCAGG 60.106 60.000 0.00 0.00 0.00 3.86
1962 2134 3.083997 ATCGTCCCCAGGTCAGGC 61.084 66.667 0.00 0.00 0.00 4.85
1965 2137 3.637273 GTCCCCAGGTCAGGCGTT 61.637 66.667 0.00 0.00 0.00 4.84
1966 2138 3.636231 TCCCCAGGTCAGGCGTTG 61.636 66.667 0.00 0.00 0.00 4.10
1968 2140 4.641645 CCCAGGTCAGGCGTTGCA 62.642 66.667 0.00 0.00 0.00 4.08
1969 2141 2.594303 CCAGGTCAGGCGTTGCAA 60.594 61.111 0.00 0.00 0.00 4.08
1970 2142 2.620112 CCAGGTCAGGCGTTGCAAG 61.620 63.158 0.00 0.00 0.00 4.01
1971 2143 2.980233 AGGTCAGGCGTTGCAAGC 60.980 61.111 0.00 5.82 0.00 4.01
1972 2144 3.286751 GGTCAGGCGTTGCAAGCA 61.287 61.111 18.36 0.00 36.08 3.91
1973 2145 2.050985 GTCAGGCGTTGCAAGCAC 60.051 61.111 18.36 10.41 36.08 4.40
1974 2146 3.286751 TCAGGCGTTGCAAGCACC 61.287 61.111 18.36 12.18 36.08 5.01
1975 2147 3.594775 CAGGCGTTGCAAGCACCA 61.595 61.111 18.36 0.00 36.08 4.17
1976 2148 2.598394 AGGCGTTGCAAGCACCAT 60.598 55.556 18.36 2.33 36.08 3.55
1977 2149 2.126346 GGCGTTGCAAGCACCATC 60.126 61.111 18.36 0.00 36.08 3.51
1978 2150 2.629656 GGCGTTGCAAGCACCATCT 61.630 57.895 18.36 0.00 36.08 2.90
1979 2151 1.154150 GCGTTGCAAGCACCATCTC 60.154 57.895 0.00 0.00 34.19 2.75
1980 2152 1.133253 CGTTGCAAGCACCATCTCG 59.867 57.895 0.00 0.00 0.00 4.04
1981 2153 1.154150 GTTGCAAGCACCATCTCGC 60.154 57.895 0.00 0.00 0.00 5.03
1982 2154 2.679934 TTGCAAGCACCATCTCGCG 61.680 57.895 0.00 0.00 0.00 5.87
1983 2155 3.869272 GCAAGCACCATCTCGCGG 61.869 66.667 6.13 0.00 0.00 6.46
1984 2156 3.197790 CAAGCACCATCTCGCGGG 61.198 66.667 6.13 1.01 0.00 6.13
2012 2184 2.047844 GCACAGCGAGCTCCTGAA 60.048 61.111 28.29 0.00 34.47 3.02
2013 2185 1.669115 GCACAGCGAGCTCCTGAAA 60.669 57.895 28.29 0.00 34.47 2.69
2014 2186 1.905922 GCACAGCGAGCTCCTGAAAC 61.906 60.000 28.29 17.26 34.47 2.78
2015 2187 1.373497 ACAGCGAGCTCCTGAAACG 60.373 57.895 28.29 10.97 34.47 3.60
2017 2189 3.491652 GCGAGCTCCTGAAACGCC 61.492 66.667 8.47 0.00 42.79 5.68
2018 2190 2.815647 CGAGCTCCTGAAACGCCC 60.816 66.667 8.47 0.00 0.00 6.13
2019 2191 2.347490 GAGCTCCTGAAACGCCCA 59.653 61.111 0.87 0.00 0.00 5.36
2020 2192 1.743252 GAGCTCCTGAAACGCCCAG 60.743 63.158 0.87 0.00 0.00 4.45
2021 2193 3.435186 GCTCCTGAAACGCCCAGC 61.435 66.667 0.00 0.00 0.00 4.85
2022 2194 2.747855 CTCCTGAAACGCCCAGCC 60.748 66.667 0.00 0.00 0.00 4.85
2023 2195 4.344865 TCCTGAAACGCCCAGCCC 62.345 66.667 0.00 0.00 0.00 5.19
2024 2196 4.659172 CCTGAAACGCCCAGCCCA 62.659 66.667 0.00 0.00 0.00 5.36
2025 2197 3.058160 CTGAAACGCCCAGCCCAG 61.058 66.667 0.00 0.00 0.00 4.45
2026 2198 4.659172 TGAAACGCCCAGCCCAGG 62.659 66.667 0.00 0.00 0.00 4.45
2053 2225 3.493440 GGTTTAACGGCCCGCGAG 61.493 66.667 8.23 0.00 0.00 5.03
2054 2226 4.156622 GTTTAACGGCCCGCGAGC 62.157 66.667 8.23 5.53 0.00 5.03
2055 2227 4.382320 TTTAACGGCCCGCGAGCT 62.382 61.111 13.68 0.00 0.00 4.09
2056 2228 4.807039 TTAACGGCCCGCGAGCTC 62.807 66.667 13.68 2.73 0.00 4.09
2062 2234 4.760047 GCCCGCGAGCTCCTGAAA 62.760 66.667 8.23 0.00 0.00 2.69
2063 2235 2.815647 CCCGCGAGCTCCTGAAAC 60.816 66.667 8.23 0.00 0.00 2.78
2064 2236 3.181967 CCGCGAGCTCCTGAAACG 61.182 66.667 8.23 2.74 0.00 3.60
2065 2237 3.843240 CGCGAGCTCCTGAAACGC 61.843 66.667 8.47 5.85 44.64 4.84
2066 2238 3.491652 GCGAGCTCCTGAAACGCC 61.492 66.667 8.47 0.00 42.79 5.68
2067 2239 2.815647 CGAGCTCCTGAAACGCCC 60.816 66.667 8.47 0.00 0.00 6.13
2068 2240 2.347490 GAGCTCCTGAAACGCCCA 59.653 61.111 0.87 0.00 0.00 5.36
2069 2241 1.743252 GAGCTCCTGAAACGCCCAG 60.743 63.158 0.87 0.00 0.00 4.45
2070 2242 3.435186 GCTCCTGAAACGCCCAGC 61.435 66.667 0.00 0.00 0.00 4.85
2071 2243 2.747855 CTCCTGAAACGCCCAGCC 60.748 66.667 0.00 0.00 0.00 4.85
2072 2244 4.344865 TCCTGAAACGCCCAGCCC 62.345 66.667 0.00 0.00 0.00 5.19
2073 2245 4.659172 CCTGAAACGCCCAGCCCA 62.659 66.667 0.00 0.00 0.00 5.36
2074 2246 3.058160 CTGAAACGCCCAGCCCAG 61.058 66.667 0.00 0.00 0.00 4.45
2075 2247 4.659172 TGAAACGCCCAGCCCAGG 62.659 66.667 0.00 0.00 0.00 4.45
2094 2266 3.423154 CGTGCTCCGGTTTCTGCC 61.423 66.667 0.00 0.00 0.00 4.85
2095 2267 2.032681 GTGCTCCGGTTTCTGCCT 59.967 61.111 0.00 0.00 0.00 4.75
2096 2268 2.035442 GTGCTCCGGTTTCTGCCTC 61.035 63.158 0.00 0.00 0.00 4.70
2097 2269 2.815647 GCTCCGGTTTCTGCCTCG 60.816 66.667 0.00 0.00 0.00 4.63
2098 2270 2.125512 CTCCGGTTTCTGCCTCGG 60.126 66.667 0.00 0.00 43.42 4.63
2100 2272 2.125512 CCGGTTTCTGCCTCGGAG 60.126 66.667 0.00 0.00 44.69 4.63
2101 2273 2.646175 CCGGTTTCTGCCTCGGAGA 61.646 63.158 6.58 0.00 44.69 3.71
2102 2274 1.292223 CGGTTTCTGCCTCGGAGAA 59.708 57.895 6.58 0.00 34.09 2.87
2103 2275 0.320421 CGGTTTCTGCCTCGGAGAAA 60.320 55.000 6.58 4.45 37.15 2.52
2104 2276 1.876416 CGGTTTCTGCCTCGGAGAAAA 60.876 52.381 6.58 0.00 40.30 2.29
2105 2277 2.227194 GGTTTCTGCCTCGGAGAAAAA 58.773 47.619 6.58 0.00 40.30 1.94
2127 2299 8.579850 AAAAAGAACAATCCTACATCTATGCA 57.420 30.769 0.00 0.00 0.00 3.96
2128 2300 8.579850 AAAAGAACAATCCTACATCTATGCAA 57.420 30.769 0.00 0.00 0.00 4.08
2129 2301 7.798596 AAGAACAATCCTACATCTATGCAAG 57.201 36.000 0.00 0.00 0.00 4.01
2130 2302 6.893583 AGAACAATCCTACATCTATGCAAGT 58.106 36.000 0.00 0.00 0.00 3.16
2131 2303 6.765036 AGAACAATCCTACATCTATGCAAGTG 59.235 38.462 0.00 0.00 0.00 3.16
2132 2304 5.994250 ACAATCCTACATCTATGCAAGTGT 58.006 37.500 0.00 0.00 0.00 3.55
2133 2305 6.418101 ACAATCCTACATCTATGCAAGTGTT 58.582 36.000 0.00 0.00 0.00 3.32
2134 2306 6.886459 ACAATCCTACATCTATGCAAGTGTTT 59.114 34.615 0.00 0.00 0.00 2.83
2135 2307 7.394359 ACAATCCTACATCTATGCAAGTGTTTT 59.606 33.333 0.00 0.00 0.00 2.43
2136 2308 6.741992 TCCTACATCTATGCAAGTGTTTTG 57.258 37.500 0.00 0.00 0.00 2.44
2137 2309 6.237901 TCCTACATCTATGCAAGTGTTTTGT 58.762 36.000 0.00 0.00 0.00 2.83
2138 2310 6.714810 TCCTACATCTATGCAAGTGTTTTGTT 59.285 34.615 0.00 0.00 0.00 2.83
2139 2311 7.230510 TCCTACATCTATGCAAGTGTTTTGTTT 59.769 33.333 0.00 0.00 0.00 2.83
2140 2312 7.867403 CCTACATCTATGCAAGTGTTTTGTTTT 59.133 33.333 0.00 0.00 0.00 2.43
2141 2313 9.248291 CTACATCTATGCAAGTGTTTTGTTTTT 57.752 29.630 0.00 0.00 0.00 1.94
2176 2348 9.733556 AAAAAGTCCAAAATAAACCTTGAACTT 57.266 25.926 0.00 0.00 0.00 2.66
2177 2349 8.716646 AAAGTCCAAAATAAACCTTGAACTTG 57.283 30.769 0.00 0.00 0.00 3.16
2178 2350 7.418337 AGTCCAAAATAAACCTTGAACTTGT 57.582 32.000 0.00 0.00 0.00 3.16
2179 2351 8.528044 AGTCCAAAATAAACCTTGAACTTGTA 57.472 30.769 0.00 0.00 0.00 2.41
2180 2352 8.973182 AGTCCAAAATAAACCTTGAACTTGTAA 58.027 29.630 0.00 0.00 0.00 2.41
2181 2353 9.589111 GTCCAAAATAAACCTTGAACTTGTAAA 57.411 29.630 0.00 0.00 0.00 2.01
2188 2360 7.770801 AAACCTTGAACTTGTAAATCAAAGC 57.229 32.000 0.00 0.00 35.48 3.51
2189 2361 6.715347 ACCTTGAACTTGTAAATCAAAGCT 57.285 33.333 0.00 0.00 35.48 3.74
2190 2362 7.817418 ACCTTGAACTTGTAAATCAAAGCTA 57.183 32.000 0.00 0.00 35.48 3.32
2191 2363 8.232913 ACCTTGAACTTGTAAATCAAAGCTAA 57.767 30.769 0.00 0.00 35.48 3.09
2192 2364 8.691797 ACCTTGAACTTGTAAATCAAAGCTAAA 58.308 29.630 0.00 0.00 35.48 1.85
2193 2365 9.696917 CCTTGAACTTGTAAATCAAAGCTAAAT 57.303 29.630 0.00 0.00 35.48 1.40
2195 2367 8.948853 TGAACTTGTAAATCAAAGCTAAATCG 57.051 30.769 0.00 0.00 35.48 3.34
2196 2368 8.779303 TGAACTTGTAAATCAAAGCTAAATCGA 58.221 29.630 0.00 0.00 35.48 3.59
2197 2369 9.607285 GAACTTGTAAATCAAAGCTAAATCGAA 57.393 29.630 0.00 0.00 35.48 3.71
2198 2370 8.950403 ACTTGTAAATCAAAGCTAAATCGAAC 57.050 30.769 0.00 0.00 35.48 3.95
2199 2371 8.021396 ACTTGTAAATCAAAGCTAAATCGAACC 58.979 33.333 0.00 0.00 35.48 3.62
2200 2372 6.848451 TGTAAATCAAAGCTAAATCGAACCC 58.152 36.000 0.00 0.00 0.00 4.11
2201 2373 6.657541 TGTAAATCAAAGCTAAATCGAACCCT 59.342 34.615 0.00 0.00 0.00 4.34
2202 2374 5.567138 AATCAAAGCTAAATCGAACCCTG 57.433 39.130 0.00 0.00 0.00 4.45
2203 2375 4.280436 TCAAAGCTAAATCGAACCCTGA 57.720 40.909 0.00 0.00 0.00 3.86
2204 2376 4.647611 TCAAAGCTAAATCGAACCCTGAA 58.352 39.130 0.00 0.00 0.00 3.02
2205 2377 5.253330 TCAAAGCTAAATCGAACCCTGAAT 58.747 37.500 0.00 0.00 0.00 2.57
2206 2378 5.354234 TCAAAGCTAAATCGAACCCTGAATC 59.646 40.000 0.00 0.00 0.00 2.52
2207 2379 3.809905 AGCTAAATCGAACCCTGAATCC 58.190 45.455 0.00 0.00 0.00 3.01
2208 2380 2.879026 GCTAAATCGAACCCTGAATCCC 59.121 50.000 0.00 0.00 0.00 3.85
2209 2381 2.038387 AAATCGAACCCTGAATCCCG 57.962 50.000 0.00 0.00 0.00 5.14
2210 2382 0.180406 AATCGAACCCTGAATCCCGG 59.820 55.000 0.00 0.00 0.00 5.73
2211 2383 0.981277 ATCGAACCCTGAATCCCGGT 60.981 55.000 0.00 0.00 0.00 5.28
2212 2384 1.196104 TCGAACCCTGAATCCCGGTT 61.196 55.000 0.00 1.29 42.58 4.44
2213 2385 0.322187 CGAACCCTGAATCCCGGTTT 60.322 55.000 0.00 0.00 39.98 3.27
2214 2386 1.065998 CGAACCCTGAATCCCGGTTTA 60.066 52.381 0.00 0.00 39.98 2.01
2215 2387 2.420967 CGAACCCTGAATCCCGGTTTAT 60.421 50.000 0.00 0.00 39.98 1.40
2216 2388 3.181463 CGAACCCTGAATCCCGGTTTATA 60.181 47.826 0.00 0.00 39.98 0.98
2217 2389 4.504340 CGAACCCTGAATCCCGGTTTATAT 60.504 45.833 0.00 0.00 39.98 0.86
2218 2390 5.382616 GAACCCTGAATCCCGGTTTATATT 58.617 41.667 0.00 0.00 39.98 1.28
2219 2391 6.518516 AACCCTGAATCCCGGTTTATATTA 57.481 37.500 0.00 0.00 36.46 0.98
2220 2392 6.518516 ACCCTGAATCCCGGTTTATATTAA 57.481 37.500 0.00 0.00 0.00 1.40
2221 2393 6.913545 ACCCTGAATCCCGGTTTATATTAAA 58.086 36.000 0.00 0.00 0.00 1.52
2222 2394 6.774170 ACCCTGAATCCCGGTTTATATTAAAC 59.226 38.462 0.00 2.27 0.00 2.01
2223 2395 6.208007 CCCTGAATCCCGGTTTATATTAAACC 59.792 42.308 15.94 15.94 44.69 3.27
2224 2396 7.002276 CCTGAATCCCGGTTTATATTAAACCT 58.998 38.462 20.93 7.34 45.66 3.50
2225 2397 7.504574 CCTGAATCCCGGTTTATATTAAACCTT 59.495 37.037 20.93 11.97 45.66 3.50
2226 2398 8.228035 TGAATCCCGGTTTATATTAAACCTTG 57.772 34.615 20.93 14.08 45.66 3.61
2227 2399 7.835181 TGAATCCCGGTTTATATTAAACCTTGT 59.165 33.333 20.93 7.23 45.66 3.16
2228 2400 7.576861 ATCCCGGTTTATATTAAACCTTGTG 57.423 36.000 20.93 9.78 45.66 3.33
2229 2401 5.357596 TCCCGGTTTATATTAAACCTTGTGC 59.642 40.000 20.93 1.54 45.66 4.57
2230 2402 5.125739 CCCGGTTTATATTAAACCTTGTGCA 59.874 40.000 20.93 0.00 45.66 4.57
2231 2403 6.183360 CCCGGTTTATATTAAACCTTGTGCAT 60.183 38.462 20.93 0.00 45.66 3.96
2232 2404 7.262048 CCGGTTTATATTAAACCTTGTGCATT 58.738 34.615 20.93 0.00 45.66 3.56
2233 2405 7.762159 CCGGTTTATATTAAACCTTGTGCATTT 59.238 33.333 20.93 0.00 45.66 2.32
2234 2406 9.145865 CGGTTTATATTAAACCTTGTGCATTTT 57.854 29.630 20.93 0.00 45.66 1.82
2255 2427 5.515548 TTTTCGAAGAGATTGTCGACATG 57.484 39.130 20.80 2.53 45.35 3.21
2256 2428 3.150848 TCGAAGAGATTGTCGACATGG 57.849 47.619 20.80 4.61 41.13 3.66
2257 2429 1.590238 CGAAGAGATTGTCGACATGGC 59.410 52.381 20.80 11.60 39.64 4.40
2258 2430 2.621338 GAAGAGATTGTCGACATGGCA 58.379 47.619 20.80 4.31 0.00 4.92
2259 2431 2.306341 AGAGATTGTCGACATGGCAG 57.694 50.000 20.80 0.00 0.00 4.85
2260 2432 0.654683 GAGATTGTCGACATGGCAGC 59.345 55.000 20.80 7.13 0.00 5.25
2261 2433 0.251354 AGATTGTCGACATGGCAGCT 59.749 50.000 20.80 9.66 0.00 4.24
2262 2434 0.376152 GATTGTCGACATGGCAGCTG 59.624 55.000 20.80 10.11 0.00 4.24
2263 2435 1.028330 ATTGTCGACATGGCAGCTGG 61.028 55.000 20.80 0.31 0.00 4.85
2264 2436 2.046892 GTCGACATGGCAGCTGGT 60.047 61.111 17.12 4.19 0.00 4.00
2265 2437 2.103042 GTCGACATGGCAGCTGGTC 61.103 63.158 17.12 12.91 0.00 4.02
2266 2438 3.190849 CGACATGGCAGCTGGTCG 61.191 66.667 22.68 22.68 45.62 4.79
2267 2439 2.265739 GACATGGCAGCTGGTCGA 59.734 61.111 17.12 0.00 0.00 4.20
2268 2440 1.375908 GACATGGCAGCTGGTCGAA 60.376 57.895 17.12 0.00 0.00 3.71
2269 2441 1.639298 GACATGGCAGCTGGTCGAAC 61.639 60.000 17.12 0.00 0.00 3.95
2270 2442 2.045926 ATGGCAGCTGGTCGAACC 60.046 61.111 17.12 7.37 39.22 3.62
2271 2443 3.958147 ATGGCAGCTGGTCGAACCG 62.958 63.158 17.12 0.00 42.58 4.44
2274 2446 3.691342 CAGCTGGTCGAACCGGGA 61.691 66.667 6.32 0.00 44.90 5.14
2275 2447 2.683933 AGCTGGTCGAACCGGGAT 60.684 61.111 6.32 0.00 44.90 3.85
2276 2448 1.380785 AGCTGGTCGAACCGGGATA 60.381 57.895 6.32 0.00 44.90 2.59
2277 2449 1.067582 GCTGGTCGAACCGGGATAG 59.932 63.158 6.32 0.00 44.90 2.08
2278 2450 1.067582 CTGGTCGAACCGGGATAGC 59.932 63.158 6.32 0.00 42.58 2.97
2279 2451 1.380785 TGGTCGAACCGGGATAGCT 60.381 57.895 6.32 0.00 42.58 3.32
2280 2452 1.067582 GGTCGAACCGGGATAGCTG 59.932 63.158 6.32 0.00 0.00 4.24
2281 2453 1.067582 GTCGAACCGGGATAGCTGG 59.932 63.158 6.32 0.00 0.00 4.85
2282 2454 2.280186 CGAACCGGGATAGCTGGC 60.280 66.667 6.32 0.00 0.00 4.85
2283 2455 2.280186 GAACCGGGATAGCTGGCG 60.280 66.667 6.32 0.00 0.00 5.69
2284 2456 2.762459 AACCGGGATAGCTGGCGA 60.762 61.111 6.32 0.00 0.00 5.54
2285 2457 2.973180 GAACCGGGATAGCTGGCGAC 62.973 65.000 6.32 0.00 0.00 5.19
2286 2458 3.227276 CCGGGATAGCTGGCGACT 61.227 66.667 0.00 0.00 0.00 4.18
2287 2459 2.028190 CGGGATAGCTGGCGACTG 59.972 66.667 0.00 0.00 0.00 3.51
2288 2460 2.423446 GGGATAGCTGGCGACTGG 59.577 66.667 0.00 0.00 0.00 4.00
2289 2461 2.423446 GGATAGCTGGCGACTGGG 59.577 66.667 0.00 0.00 0.00 4.45
2290 2462 2.280457 GATAGCTGGCGACTGGGC 60.280 66.667 0.00 0.00 42.69 5.36
2307 2479 2.281622 CCGGCCCACCAAACGTTA 60.282 61.111 0.00 0.00 34.57 3.18
2308 2480 1.897615 CCGGCCCACCAAACGTTAA 60.898 57.895 0.00 0.00 34.57 2.01
2309 2481 1.283487 CGGCCCACCAAACGTTAAC 59.717 57.895 0.00 0.00 34.57 2.01
2310 2482 1.445716 CGGCCCACCAAACGTTAACA 61.446 55.000 0.00 0.00 34.57 2.41
2311 2483 0.963225 GGCCCACCAAACGTTAACAT 59.037 50.000 0.00 0.00 35.26 2.71
2312 2484 1.336424 GGCCCACCAAACGTTAACATG 60.336 52.381 0.00 0.00 35.26 3.21
2313 2485 1.338655 GCCCACCAAACGTTAACATGT 59.661 47.619 0.00 0.00 0.00 3.21
2314 2486 2.223852 GCCCACCAAACGTTAACATGTT 60.224 45.455 16.68 16.68 33.16 2.71
2315 2487 3.738590 GCCCACCAAACGTTAACATGTTT 60.739 43.478 17.78 6.14 41.97 2.83
2316 2488 4.434520 CCCACCAAACGTTAACATGTTTT 58.565 39.130 17.78 1.51 39.68 2.43
2317 2489 4.870991 CCCACCAAACGTTAACATGTTTTT 59.129 37.500 17.78 8.25 39.68 1.94
2318 2490 5.005875 CCCACCAAACGTTAACATGTTTTTC 59.994 40.000 17.78 6.82 39.68 2.29
2319 2491 5.808030 CCACCAAACGTTAACATGTTTTTCT 59.192 36.000 17.78 0.00 39.68 2.52
2320 2492 6.311690 CCACCAAACGTTAACATGTTTTTCTT 59.688 34.615 17.78 1.89 39.68 2.52
2321 2493 7.148557 CCACCAAACGTTAACATGTTTTTCTTT 60.149 33.333 17.78 7.20 39.68 2.52
2322 2494 8.224437 CACCAAACGTTAACATGTTTTTCTTTT 58.776 29.630 17.78 10.29 39.68 2.27
2323 2495 8.224437 ACCAAACGTTAACATGTTTTTCTTTTG 58.776 29.630 17.78 19.04 39.68 2.44
2324 2496 8.436200 CCAAACGTTAACATGTTTTTCTTTTGA 58.564 29.630 17.78 0.00 39.68 2.69
2325 2497 9.245284 CAAACGTTAACATGTTTTTCTTTTGAC 57.755 29.630 17.78 0.00 39.68 3.18
2326 2498 8.751302 AACGTTAACATGTTTTTCTTTTGACT 57.249 26.923 17.78 0.00 0.00 3.41
2327 2499 8.168681 ACGTTAACATGTTTTTCTTTTGACTG 57.831 30.769 17.78 0.00 0.00 3.51
2328 2500 8.024285 ACGTTAACATGTTTTTCTTTTGACTGA 58.976 29.630 17.78 0.00 0.00 3.41
2329 2501 8.855279 CGTTAACATGTTTTTCTTTTGACTGAA 58.145 29.630 17.78 0.00 0.00 3.02
2337 2509 9.712305 TGTTTTTCTTTTGACTGAAAAATACCA 57.288 25.926 14.02 7.39 46.66 3.25
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 3.222121 CTACCCGCCGACTACCCC 61.222 72.222 0.00 0.00 0.00 4.95
52 146 0.747255 TCTGGCAATCGAGCTCTACC 59.253 55.000 12.85 6.30 34.17 3.18
60 154 2.903357 GCTCCCTCTGGCAATCGA 59.097 61.111 0.00 0.00 0.00 3.59
61 155 2.587194 CGCTCCCTCTGGCAATCG 60.587 66.667 0.00 0.00 0.00 3.34
73 173 4.874977 GACTACCCTGCGCGCTCC 62.875 72.222 33.29 3.49 0.00 4.70
109 209 3.071206 GCTCTCTCGTGCCCTGGA 61.071 66.667 0.00 0.00 0.00 3.86
119 219 1.587613 CTAACCTGCGCGCTCTCTC 60.588 63.158 33.29 1.73 0.00 3.20
134 234 1.064758 TCCTAACTACCCGCCGACTAA 60.065 52.381 0.00 0.00 0.00 2.24
149 249 0.546122 TACTACCTCGGCGGTCCTAA 59.454 55.000 7.21 0.00 44.93 2.69
177 277 1.966451 CCACGAACCCAAGACAGCC 60.966 63.158 0.00 0.00 0.00 4.85
310 410 1.446272 GTCTACACGACTGCCTGCC 60.446 63.158 0.00 0.00 39.61 4.85
367 467 2.863137 TGAAAAACGCAAGCCATTTGAC 59.137 40.909 0.00 0.00 45.62 3.18
398 498 5.689383 AAGCAGTGAACGAAATTACATGT 57.311 34.783 2.69 2.69 0.00 3.21
474 576 1.948834 CATGCATGCGTATTCCTCCAA 59.051 47.619 14.93 0.00 0.00 3.53
475 577 1.596603 CATGCATGCGTATTCCTCCA 58.403 50.000 14.93 0.00 0.00 3.86
499 601 2.041701 AGCCAGACAAAAACTTGGCAT 58.958 42.857 15.80 0.00 44.18 4.40
522 624 1.142060 CCCAACACCTATCCCGCATTA 59.858 52.381 0.00 0.00 0.00 1.90
579 682 1.069296 TCGCAAAAAGGATTCAGCGTG 60.069 47.619 0.00 0.00 40.46 5.34
580 683 1.069227 GTCGCAAAAAGGATTCAGCGT 60.069 47.619 0.00 0.00 40.46 5.07
581 684 1.606606 GTCGCAAAAAGGATTCAGCG 58.393 50.000 0.00 0.00 40.75 5.18
582 685 1.269448 TGGTCGCAAAAAGGATTCAGC 59.731 47.619 0.00 0.00 0.00 4.26
583 686 2.095059 CCTGGTCGCAAAAAGGATTCAG 60.095 50.000 0.00 0.00 30.92 3.02
584 687 1.885887 CCTGGTCGCAAAAAGGATTCA 59.114 47.619 0.00 0.00 30.92 2.57
585 688 1.402852 GCCTGGTCGCAAAAAGGATTC 60.403 52.381 0.00 0.00 30.92 2.52
586 689 0.603065 GCCTGGTCGCAAAAAGGATT 59.397 50.000 0.00 0.00 30.92 3.01
587 690 0.539438 TGCCTGGTCGCAAAAAGGAT 60.539 50.000 0.00 0.00 35.32 3.24
588 691 0.539438 ATGCCTGGTCGCAAAAAGGA 60.539 50.000 0.00 0.00 43.24 3.36
589 692 0.388907 CATGCCTGGTCGCAAAAAGG 60.389 55.000 0.00 0.00 43.24 3.11
609 712 7.277539 GATCAATGATCTCAAAACTCTCGAGTT 59.722 37.037 15.48 6.49 42.75 3.01
613 716 5.518128 ACGATCAATGATCTCAAAACTCTCG 59.482 40.000 19.62 7.21 36.96 4.04
627 730 3.885901 CTGGACTAGGAGACGATCAATGA 59.114 47.826 0.00 0.00 0.00 2.57
636 739 2.787567 GGGCGCTGGACTAGGAGAC 61.788 68.421 7.64 0.00 0.00 3.36
637 740 2.442272 GGGCGCTGGACTAGGAGA 60.442 66.667 7.64 0.00 0.00 3.71
665 768 0.472471 TCGAACCAAACTTCCCTGCT 59.528 50.000 0.00 0.00 0.00 4.24
666 769 1.314730 TTCGAACCAAACTTCCCTGC 58.685 50.000 0.00 0.00 0.00 4.85
667 770 3.821033 AGAATTCGAACCAAACTTCCCTG 59.179 43.478 0.00 0.00 0.00 4.45
693 796 0.398318 GCACCTCTGGACTCTGGTTT 59.602 55.000 0.00 0.00 0.00 3.27
756 862 0.535102 CCGTGTGGTTGAGCTCCTTT 60.535 55.000 12.15 0.00 0.00 3.11
765 871 2.203280 TGGAAGGCCGTGTGGTTG 60.203 61.111 0.00 0.00 37.67 3.77
887 998 5.007724 GTGTTTGTTGTTACCAGGAAGAGAG 59.992 44.000 0.00 0.00 0.00 3.20
899 1010 0.656785 GGCGACCGTGTTTGTTGTTA 59.343 50.000 0.00 0.00 0.00 2.41
942 1054 2.423577 CCGTTGGTTCTCTTTAGGTGG 58.576 52.381 0.00 0.00 0.00 4.61
956 1068 1.508088 GATGGAGCAAAGCCGTTGG 59.492 57.895 0.35 0.00 37.73 3.77
957 1069 1.243342 TGGATGGAGCAAAGCCGTTG 61.243 55.000 0.00 0.00 40.50 4.10
960 1074 2.409870 GGTGGATGGAGCAAAGCCG 61.410 63.158 0.00 0.00 0.00 5.52
975 1090 2.530661 TGTGGGGGTAGGTGGGTG 60.531 66.667 0.00 0.00 0.00 4.61
979 1094 1.299976 GCTTCTGTGGGGGTAGGTG 59.700 63.158 0.00 0.00 0.00 4.00
1062 1178 1.811266 CGCTCAGGCTTACGCACAT 60.811 57.895 0.00 0.00 38.10 3.21
1090 1206 6.521151 AAGCAGCAGCAAATTAATAAGTCT 57.479 33.333 3.17 0.00 45.49 3.24
1392 1513 7.287005 TGGTAGTTAAGATACATAGGTGACTGG 59.713 40.741 0.00 0.00 43.88 4.00
1399 1520 8.529476 GGGTACATGGTAGTTAAGATACATAGG 58.471 40.741 0.00 0.00 0.00 2.57
1400 1521 9.085645 TGGGTACATGGTAGTTAAGATACATAG 57.914 37.037 0.00 0.00 0.00 2.23
1401 1522 8.863086 GTGGGTACATGGTAGTTAAGATACATA 58.137 37.037 0.00 0.00 0.00 2.29
1402 1523 7.567622 AGTGGGTACATGGTAGTTAAGATACAT 59.432 37.037 0.00 0.00 0.00 2.29
1403 1524 6.899075 AGTGGGTACATGGTAGTTAAGATACA 59.101 38.462 0.00 0.00 0.00 2.29
1404 1525 7.357429 AGTGGGTACATGGTAGTTAAGATAC 57.643 40.000 0.00 0.00 0.00 2.24
1405 1526 6.263842 CGAGTGGGTACATGGTAGTTAAGATA 59.736 42.308 0.00 0.00 0.00 1.98
1406 1527 5.068723 CGAGTGGGTACATGGTAGTTAAGAT 59.931 44.000 0.00 0.00 0.00 2.40
1442 1581 3.486209 CGCCACGTTTTATTACATCACCC 60.486 47.826 0.00 0.00 0.00 4.61
1445 1584 2.222841 CGCGCCACGTTTTATTACATCA 60.223 45.455 0.00 0.00 36.87 3.07
1487 1628 3.510251 CATGCATCATGCTACGTACAC 57.490 47.619 11.84 0.00 45.31 2.90
1528 1669 9.188588 GATCGTACGAGTAATCCATTGATTTTA 57.811 33.333 23.89 0.00 41.44 1.52
1543 1684 1.085091 ACGCAAGAGATCGTACGAGT 58.915 50.000 23.89 13.26 43.62 4.18
1544 1685 1.457738 CACGCAAGAGATCGTACGAG 58.542 55.000 23.89 9.74 43.62 4.18
1569 1729 5.924356 TCGTGGAGATATTTTTCCATGCTA 58.076 37.500 9.32 0.00 45.82 3.49
1592 1752 4.455877 AGCGAGAACCATTTCGAGAAATTT 59.544 37.500 8.21 2.41 38.84 1.82
1619 1779 2.254459 CCTTCATCTCAGACGTCAACG 58.746 52.381 19.50 5.80 46.33 4.10
1620 1780 1.996191 GCCTTCATCTCAGACGTCAAC 59.004 52.381 19.50 0.00 0.00 3.18
1621 1781 1.402852 CGCCTTCATCTCAGACGTCAA 60.403 52.381 19.50 4.29 0.00 3.18
1622 1782 0.171231 CGCCTTCATCTCAGACGTCA 59.829 55.000 19.50 0.00 0.00 4.35
1623 1783 0.526524 CCGCCTTCATCTCAGACGTC 60.527 60.000 7.70 7.70 0.00 4.34
1628 1788 1.523258 CTGGCCGCCTTCATCTCAG 60.523 63.158 11.61 0.00 0.00 3.35
1629 1789 1.964608 CTCTGGCCGCCTTCATCTCA 61.965 60.000 11.61 0.00 0.00 3.27
1630 1790 1.227497 CTCTGGCCGCCTTCATCTC 60.227 63.158 11.61 0.00 0.00 2.75
1631 1791 2.906458 CTCTGGCCGCCTTCATCT 59.094 61.111 11.61 0.00 0.00 2.90
1687 1853 5.628193 GTGCAGAACAAATGACTGAAATGAG 59.372 40.000 13.20 0.00 34.07 2.90
1692 1858 4.035558 GTGAGTGCAGAACAAATGACTGAA 59.964 41.667 13.20 3.81 34.07 3.02
1694 1860 3.313249 TGTGAGTGCAGAACAAATGACTG 59.687 43.478 0.00 0.00 35.14 3.51
1750 1922 9.535170 TGGAATATTTTGGTTGAGTGGTTAATA 57.465 29.630 0.00 0.00 0.00 0.98
1751 1923 8.429237 TGGAATATTTTGGTTGAGTGGTTAAT 57.571 30.769 0.00 0.00 0.00 1.40
1752 1924 7.841282 TGGAATATTTTGGTTGAGTGGTTAA 57.159 32.000 0.00 0.00 0.00 2.01
1753 1925 7.123547 GGATGGAATATTTTGGTTGAGTGGTTA 59.876 37.037 0.00 0.00 0.00 2.85
1754 1926 6.070824 GGATGGAATATTTTGGTTGAGTGGTT 60.071 38.462 0.00 0.00 0.00 3.67
1755 1927 5.422012 GGATGGAATATTTTGGTTGAGTGGT 59.578 40.000 0.00 0.00 0.00 4.16
1756 1928 5.421693 TGGATGGAATATTTTGGTTGAGTGG 59.578 40.000 0.00 0.00 0.00 4.00
1788 1960 6.114767 TGTAATGTAATTTCGGGGTCTAACC 58.885 40.000 0.00 0.00 37.87 2.85
1789 1961 7.614124 TTGTAATGTAATTTCGGGGTCTAAC 57.386 36.000 0.00 0.00 37.87 2.34
1790 1962 8.632906 TTTTGTAATGTAATTTCGGGGTCTAA 57.367 30.769 0.00 0.00 37.87 2.10
1791 1963 8.513774 GTTTTTGTAATGTAATTTCGGGGTCTA 58.486 33.333 0.00 0.00 37.87 2.59
1792 1964 7.014422 TGTTTTTGTAATGTAATTTCGGGGTCT 59.986 33.333 0.00 0.00 37.87 3.85
1793 1965 7.146648 TGTTTTTGTAATGTAATTTCGGGGTC 58.853 34.615 0.00 0.00 37.87 4.46
1794 1966 7.052142 TGTTTTTGTAATGTAATTTCGGGGT 57.948 32.000 0.00 0.00 37.87 4.95
1795 1967 7.149307 ACTGTTTTTGTAATGTAATTTCGGGG 58.851 34.615 0.00 0.00 37.87 5.73
1796 1968 9.849166 ATACTGTTTTTGTAATGTAATTTCGGG 57.151 29.630 0.00 0.00 37.87 5.14
1809 1981 9.953565 AGGTATCTGCTTTATACTGTTTTTGTA 57.046 29.630 0.00 0.00 31.71 2.41
1810 1982 8.863872 AGGTATCTGCTTTATACTGTTTTTGT 57.136 30.769 0.00 0.00 31.71 2.83
1812 1984 9.095065 CGTAGGTATCTGCTTTATACTGTTTTT 57.905 33.333 0.00 0.00 31.71 1.94
1813 1985 8.472413 TCGTAGGTATCTGCTTTATACTGTTTT 58.528 33.333 0.00 0.00 31.71 2.43
1814 1986 7.919621 GTCGTAGGTATCTGCTTTATACTGTTT 59.080 37.037 0.00 0.00 31.71 2.83
1815 1987 7.284944 AGTCGTAGGTATCTGCTTTATACTGTT 59.715 37.037 0.00 0.00 31.71 3.16
1816 1988 6.771749 AGTCGTAGGTATCTGCTTTATACTGT 59.228 38.462 0.00 0.00 31.71 3.55
1817 1989 7.204496 AGTCGTAGGTATCTGCTTTATACTG 57.796 40.000 0.00 0.00 31.71 2.74
1818 1990 7.117523 CGTAGTCGTAGGTATCTGCTTTATACT 59.882 40.741 0.00 0.00 31.71 2.12
1819 1991 7.116948 TCGTAGTCGTAGGTATCTGCTTTATAC 59.883 40.741 0.00 0.00 38.33 1.47
1820 1992 7.154656 TCGTAGTCGTAGGTATCTGCTTTATA 58.845 38.462 0.00 0.00 38.33 0.98
1821 1993 5.994054 TCGTAGTCGTAGGTATCTGCTTTAT 59.006 40.000 0.00 0.00 38.33 1.40
1822 1994 5.359756 TCGTAGTCGTAGGTATCTGCTTTA 58.640 41.667 0.00 0.00 38.33 1.85
1823 1995 4.194640 TCGTAGTCGTAGGTATCTGCTTT 58.805 43.478 0.00 0.00 38.33 3.51
1824 1996 3.801698 TCGTAGTCGTAGGTATCTGCTT 58.198 45.455 0.00 0.00 38.33 3.91
1825 1997 3.391965 CTCGTAGTCGTAGGTATCTGCT 58.608 50.000 0.00 0.00 38.33 4.24
1826 1998 2.096318 GCTCGTAGTCGTAGGTATCTGC 60.096 54.545 0.00 0.00 38.33 4.26
1827 1999 2.479656 GGCTCGTAGTCGTAGGTATCTG 59.520 54.545 0.00 0.00 38.33 2.90
1828 2000 2.368221 AGGCTCGTAGTCGTAGGTATCT 59.632 50.000 0.00 0.00 38.33 1.98
1829 2001 2.765122 AGGCTCGTAGTCGTAGGTATC 58.235 52.381 0.00 0.00 38.33 2.24
1830 2002 2.926778 AGGCTCGTAGTCGTAGGTAT 57.073 50.000 0.00 0.00 38.33 2.73
1831 2003 2.093500 TGAAGGCTCGTAGTCGTAGGTA 60.093 50.000 0.00 0.00 38.33 3.08
1832 2004 1.339438 TGAAGGCTCGTAGTCGTAGGT 60.339 52.381 0.00 0.00 38.33 3.08
1833 2005 1.063764 GTGAAGGCTCGTAGTCGTAGG 59.936 57.143 0.00 0.00 38.33 3.18
1834 2006 1.736126 TGTGAAGGCTCGTAGTCGTAG 59.264 52.381 0.00 0.00 38.33 3.51
1835 2007 1.736126 CTGTGAAGGCTCGTAGTCGTA 59.264 52.381 0.00 0.00 38.33 3.43
1836 2008 0.522180 CTGTGAAGGCTCGTAGTCGT 59.478 55.000 0.00 0.00 38.33 4.34
1837 2009 0.798771 GCTGTGAAGGCTCGTAGTCG 60.799 60.000 0.00 0.00 38.55 4.18
1838 2010 0.798771 CGCTGTGAAGGCTCGTAGTC 60.799 60.000 0.00 0.00 0.00 2.59
1839 2011 1.213013 CGCTGTGAAGGCTCGTAGT 59.787 57.895 0.00 0.00 0.00 2.73
1840 2012 0.388649 AACGCTGTGAAGGCTCGTAG 60.389 55.000 0.00 0.00 32.71 3.51
1841 2013 0.032952 AAACGCTGTGAAGGCTCGTA 59.967 50.000 0.00 0.00 32.71 3.43
1842 2014 0.814010 AAAACGCTGTGAAGGCTCGT 60.814 50.000 0.00 0.00 34.63 4.18
1843 2015 0.384725 CAAAACGCTGTGAAGGCTCG 60.385 55.000 0.00 0.00 0.00 5.03
1844 2016 0.944386 TCAAAACGCTGTGAAGGCTC 59.056 50.000 0.00 0.00 0.00 4.70
1845 2017 0.947244 CTCAAAACGCTGTGAAGGCT 59.053 50.000 0.00 0.00 0.00 4.58
1846 2018 0.663153 ACTCAAAACGCTGTGAAGGC 59.337 50.000 0.00 0.00 0.00 4.35
1847 2019 1.264288 GGACTCAAAACGCTGTGAAGG 59.736 52.381 0.00 0.00 0.00 3.46
1848 2020 1.264288 GGGACTCAAAACGCTGTGAAG 59.736 52.381 0.00 0.00 0.00 3.02
1849 2021 1.134220 AGGGACTCAAAACGCTGTGAA 60.134 47.619 0.00 0.00 0.00 3.18
1850 2022 0.468226 AGGGACTCAAAACGCTGTGA 59.532 50.000 0.00 0.00 0.00 3.58
1851 2023 3.006672 AGGGACTCAAAACGCTGTG 57.993 52.632 0.00 0.00 0.00 3.66
1864 2036 1.369321 GATCCGATGGCAGAGGGAC 59.631 63.158 10.56 2.93 0.00 4.46
1865 2037 2.203082 CGATCCGATGGCAGAGGGA 61.203 63.158 10.56 8.51 0.00 4.20
1866 2038 2.341543 CGATCCGATGGCAGAGGG 59.658 66.667 10.56 3.36 0.00 4.30
1867 2039 2.356793 GCGATCCGATGGCAGAGG 60.357 66.667 10.24 4.80 33.87 3.69
1868 2040 1.372748 GAGCGATCCGATGGCAGAG 60.373 63.158 16.60 0.00 36.36 3.35
1869 2041 0.537371 TAGAGCGATCCGATGGCAGA 60.537 55.000 16.60 0.00 36.36 4.26
1870 2042 0.315251 TTAGAGCGATCCGATGGCAG 59.685 55.000 16.60 0.00 36.36 4.85
1871 2043 0.032130 GTTAGAGCGATCCGATGGCA 59.968 55.000 16.60 0.00 36.36 4.92
1872 2044 0.667792 GGTTAGAGCGATCCGATGGC 60.668 60.000 7.26 7.26 0.00 4.40
1873 2045 0.962489 AGGTTAGAGCGATCCGATGG 59.038 55.000 0.00 0.00 0.00 3.51
1874 2046 2.034685 TGAAGGTTAGAGCGATCCGATG 59.965 50.000 0.00 0.00 0.00 3.84
1875 2047 2.034812 GTGAAGGTTAGAGCGATCCGAT 59.965 50.000 0.00 0.00 0.00 4.18
1876 2048 1.404391 GTGAAGGTTAGAGCGATCCGA 59.596 52.381 0.00 0.00 0.00 4.55
1877 2049 1.134367 TGTGAAGGTTAGAGCGATCCG 59.866 52.381 0.00 0.00 0.00 4.18
1878 2050 2.930682 GTTGTGAAGGTTAGAGCGATCC 59.069 50.000 0.00 0.00 0.00 3.36
1879 2051 3.585862 TGTTGTGAAGGTTAGAGCGATC 58.414 45.455 0.00 0.00 0.00 3.69
1880 2052 3.678056 TGTTGTGAAGGTTAGAGCGAT 57.322 42.857 0.00 0.00 0.00 4.58
1881 2053 3.678056 ATGTTGTGAAGGTTAGAGCGA 57.322 42.857 0.00 0.00 0.00 4.93
1882 2054 4.749245 AAATGTTGTGAAGGTTAGAGCG 57.251 40.909 0.00 0.00 0.00 5.03
1883 2055 6.072112 TCAAAATGTTGTGAAGGTTAGAGC 57.928 37.500 0.00 0.00 36.07 4.09
1884 2056 6.145535 GCTCAAAATGTTGTGAAGGTTAGAG 58.854 40.000 1.79 0.00 36.07 2.43
1885 2057 5.009610 GGCTCAAAATGTTGTGAAGGTTAGA 59.990 40.000 1.79 0.00 36.07 2.10
1886 2058 5.010012 AGGCTCAAAATGTTGTGAAGGTTAG 59.990 40.000 1.79 0.00 36.07 2.34
1887 2059 4.892934 AGGCTCAAAATGTTGTGAAGGTTA 59.107 37.500 1.79 0.00 36.07 2.85
1888 2060 3.706086 AGGCTCAAAATGTTGTGAAGGTT 59.294 39.130 1.79 0.00 36.07 3.50
1889 2061 3.299503 AGGCTCAAAATGTTGTGAAGGT 58.700 40.909 1.79 0.00 36.07 3.50
1890 2062 3.571401 AGAGGCTCAAAATGTTGTGAAGG 59.429 43.478 18.26 0.00 36.07 3.46
1891 2063 4.276678 TGAGAGGCTCAAAATGTTGTGAAG 59.723 41.667 18.26 0.00 37.57 3.02
1892 2064 4.206375 TGAGAGGCTCAAAATGTTGTGAA 58.794 39.130 18.26 0.00 37.57 3.18
1893 2065 3.817084 CTGAGAGGCTCAAAATGTTGTGA 59.183 43.478 18.26 0.00 40.18 3.58
1894 2066 3.611057 GCTGAGAGGCTCAAAATGTTGTG 60.611 47.826 18.26 0.00 40.18 3.33
1895 2067 2.555757 GCTGAGAGGCTCAAAATGTTGT 59.444 45.455 18.26 0.00 40.18 3.32
1896 2068 2.094854 GGCTGAGAGGCTCAAAATGTTG 60.095 50.000 18.26 0.00 40.18 3.33
1897 2069 2.165998 GGCTGAGAGGCTCAAAATGTT 58.834 47.619 18.26 0.00 40.18 2.71
1898 2070 1.831580 GGCTGAGAGGCTCAAAATGT 58.168 50.000 18.26 0.00 40.18 2.71
1899 2071 0.731417 CGGCTGAGAGGCTCAAAATG 59.269 55.000 18.26 3.16 40.18 2.32
1900 2072 0.326264 ACGGCTGAGAGGCTCAAAAT 59.674 50.000 18.26 0.00 40.18 1.82
1901 2073 0.320771 GACGGCTGAGAGGCTCAAAA 60.321 55.000 18.26 0.20 40.18 2.44
1902 2074 1.293498 GACGGCTGAGAGGCTCAAA 59.707 57.895 18.26 2.95 40.18 2.69
1903 2075 2.973899 GACGGCTGAGAGGCTCAA 59.026 61.111 18.26 3.35 40.18 3.02
1904 2076 3.443925 CGACGGCTGAGAGGCTCA 61.444 66.667 18.26 0.00 38.85 4.26
1905 2077 4.200283 CCGACGGCTGAGAGGCTC 62.200 72.222 6.34 6.34 38.85 4.70
1906 2078 4.742649 TCCGACGGCTGAGAGGCT 62.743 66.667 9.66 0.00 38.85 4.58
1907 2079 3.492311 GATCCGACGGCTGAGAGGC 62.492 68.421 9.66 0.00 37.44 4.70
1908 2080 2.725008 GATCCGACGGCTGAGAGG 59.275 66.667 9.66 0.00 0.00 3.69
1909 2081 2.329690 CGATCCGACGGCTGAGAG 59.670 66.667 9.66 0.00 0.00 3.20
1910 2082 3.889044 GCGATCCGACGGCTGAGA 61.889 66.667 9.66 0.00 0.00 3.27
1911 2083 3.815569 GAGCGATCCGACGGCTGAG 62.816 68.421 9.66 1.47 0.00 3.35
1912 2084 2.935627 TAGAGCGATCCGACGGCTGA 62.936 60.000 9.66 0.00 0.00 4.26
1913 2085 2.060004 TTAGAGCGATCCGACGGCTG 62.060 60.000 9.66 2.00 0.00 4.85
1914 2086 1.822613 TTAGAGCGATCCGACGGCT 60.823 57.895 9.66 0.00 0.00 5.52
1915 2087 1.657794 GTTAGAGCGATCCGACGGC 60.658 63.158 9.66 0.00 0.00 5.68
1916 2088 1.368969 CGTTAGAGCGATCCGACGG 60.369 63.158 15.87 7.84 0.00 4.79
1917 2089 1.368969 CCGTTAGAGCGATCCGACG 60.369 63.158 16.49 16.49 0.00 5.12
1918 2090 0.316854 GTCCGTTAGAGCGATCCGAC 60.317 60.000 0.00 0.00 0.00 4.79
1919 2091 1.769098 CGTCCGTTAGAGCGATCCGA 61.769 60.000 0.00 0.00 0.00 4.55
1920 2092 1.368969 CGTCCGTTAGAGCGATCCG 60.369 63.158 0.00 0.00 0.00 4.18
1921 2093 0.592148 ATCGTCCGTTAGAGCGATCC 59.408 55.000 0.00 0.00 35.32 3.36
1922 2094 1.002684 ACATCGTCCGTTAGAGCGATC 60.003 52.381 0.00 0.00 36.94 3.69
1923 2095 1.022735 ACATCGTCCGTTAGAGCGAT 58.977 50.000 0.00 0.00 38.45 4.58
1924 2096 1.596260 CTACATCGTCCGTTAGAGCGA 59.404 52.381 0.00 0.00 34.23 4.93
1925 2097 1.596260 TCTACATCGTCCGTTAGAGCG 59.404 52.381 0.00 0.00 0.00 5.03
1926 2098 3.664798 CGATCTACATCGTCCGTTAGAGC 60.665 52.174 0.00 0.00 45.90 4.09
1927 2099 4.055177 CGATCTACATCGTCCGTTAGAG 57.945 50.000 0.00 0.00 45.90 2.43
1938 2110 1.614413 GACCTGGGGACGATCTACATC 59.386 57.143 0.00 0.00 0.00 3.06
1939 2111 1.063190 TGACCTGGGGACGATCTACAT 60.063 52.381 0.00 0.00 0.00 2.29
1940 2112 0.333652 TGACCTGGGGACGATCTACA 59.666 55.000 0.00 0.00 0.00 2.74
1941 2113 1.033574 CTGACCTGGGGACGATCTAC 58.966 60.000 0.00 0.00 0.00 2.59
1942 2114 0.106167 CCTGACCTGGGGACGATCTA 60.106 60.000 0.00 0.00 0.00 1.98
1943 2115 1.381872 CCTGACCTGGGGACGATCT 60.382 63.158 0.00 0.00 0.00 2.75
1944 2116 3.095347 GCCTGACCTGGGGACGATC 62.095 68.421 0.00 0.00 0.00 3.69
1945 2117 3.083997 GCCTGACCTGGGGACGAT 61.084 66.667 0.00 0.00 0.00 3.73
1948 2120 3.637273 AACGCCTGACCTGGGGAC 61.637 66.667 14.98 0.00 41.89 4.46
1949 2121 3.636231 CAACGCCTGACCTGGGGA 61.636 66.667 14.98 0.00 41.89 4.81
1951 2123 4.641645 TGCAACGCCTGACCTGGG 62.642 66.667 0.00 0.00 0.00 4.45
1952 2124 2.594303 TTGCAACGCCTGACCTGG 60.594 61.111 0.00 0.00 0.00 4.45
1953 2125 2.949106 CTTGCAACGCCTGACCTG 59.051 61.111 0.00 0.00 0.00 4.00
1954 2126 2.980233 GCTTGCAACGCCTGACCT 60.980 61.111 0.00 0.00 0.00 3.85
1955 2127 3.286751 TGCTTGCAACGCCTGACC 61.287 61.111 15.29 0.00 0.00 4.02
1956 2128 2.050985 GTGCTTGCAACGCCTGAC 60.051 61.111 15.29 6.35 0.00 3.51
1957 2129 3.286751 GGTGCTTGCAACGCCTGA 61.287 61.111 18.52 1.48 34.75 3.86
1958 2130 2.807631 GATGGTGCTTGCAACGCCTG 62.808 60.000 23.14 5.88 38.55 4.85
1959 2131 2.598394 ATGGTGCTTGCAACGCCT 60.598 55.556 23.14 12.13 38.55 5.52
1960 2132 2.126346 GATGGTGCTTGCAACGCC 60.126 61.111 18.81 18.81 38.22 5.68
1961 2133 1.154150 GAGATGGTGCTTGCAACGC 60.154 57.895 12.25 12.25 0.00 4.84
1962 2134 1.133253 CGAGATGGTGCTTGCAACG 59.867 57.895 6.15 0.00 0.00 4.10
1963 2135 1.154150 GCGAGATGGTGCTTGCAAC 60.154 57.895 3.37 3.37 43.38 4.17
1964 2136 2.679934 CGCGAGATGGTGCTTGCAA 61.680 57.895 0.00 0.00 43.97 4.08
1965 2137 3.120385 CGCGAGATGGTGCTTGCA 61.120 61.111 0.00 0.00 43.97 4.08
1966 2138 3.869272 CCGCGAGATGGTGCTTGC 61.869 66.667 8.23 0.00 41.04 4.01
1967 2139 3.197790 CCCGCGAGATGGTGCTTG 61.198 66.667 8.23 0.00 0.00 4.01
1995 2167 1.669115 TTTCAGGAGCTCGCTGTGC 60.669 57.895 23.28 5.00 0.00 4.57
1996 2168 1.621301 CGTTTCAGGAGCTCGCTGTG 61.621 60.000 23.28 12.70 0.00 3.66
1997 2169 1.373497 CGTTTCAGGAGCTCGCTGT 60.373 57.895 23.28 2.21 0.00 4.40
1998 2170 2.734673 GCGTTTCAGGAGCTCGCTG 61.735 63.158 20.19 20.19 42.88 5.18
1999 2171 2.433318 GCGTTTCAGGAGCTCGCT 60.433 61.111 7.83 3.11 42.88 4.93
2000 2172 3.491652 GGCGTTTCAGGAGCTCGC 61.492 66.667 7.83 6.39 44.95 5.03
2001 2173 2.815647 GGGCGTTTCAGGAGCTCG 60.816 66.667 7.83 0.00 0.00 5.03
2002 2174 1.743252 CTGGGCGTTTCAGGAGCTC 60.743 63.158 4.71 4.71 0.00 4.09
2003 2175 2.348998 CTGGGCGTTTCAGGAGCT 59.651 61.111 0.00 0.00 0.00 4.09
2004 2176 3.435186 GCTGGGCGTTTCAGGAGC 61.435 66.667 0.00 0.00 33.16 4.70
2005 2177 2.747855 GGCTGGGCGTTTCAGGAG 60.748 66.667 0.00 0.00 33.16 3.69
2006 2178 4.344865 GGGCTGGGCGTTTCAGGA 62.345 66.667 0.00 0.00 33.16 3.86
2007 2179 4.659172 TGGGCTGGGCGTTTCAGG 62.659 66.667 0.00 0.00 33.16 3.86
2008 2180 3.058160 CTGGGCTGGGCGTTTCAG 61.058 66.667 0.00 0.00 35.49 3.02
2009 2181 4.659172 CCTGGGCTGGGCGTTTCA 62.659 66.667 0.00 0.00 0.00 2.69
2036 2208 3.493440 CTCGCGGGCCGTTAAACC 61.493 66.667 28.82 8.46 38.35 3.27
2037 2209 4.156622 GCTCGCGGGCCGTTAAAC 62.157 66.667 28.82 9.28 38.35 2.01
2038 2210 4.382320 AGCTCGCGGGCCGTTAAA 62.382 61.111 30.59 9.56 38.35 1.52
2039 2211 4.807039 GAGCTCGCGGGCCGTTAA 62.807 66.667 30.59 12.19 38.35 2.01
2045 2217 4.760047 TTTCAGGAGCTCGCGGGC 62.760 66.667 26.87 26.87 0.00 6.13
2046 2218 2.815647 GTTTCAGGAGCTCGCGGG 60.816 66.667 6.13 2.60 0.00 6.13
2047 2219 3.181967 CGTTTCAGGAGCTCGCGG 61.182 66.667 6.13 1.86 0.00 6.46
2048 2220 3.843240 GCGTTTCAGGAGCTCGCG 61.843 66.667 7.83 0.00 37.74 5.87
2049 2221 3.491652 GGCGTTTCAGGAGCTCGC 61.492 66.667 7.83 6.39 44.95 5.03
2050 2222 2.815647 GGGCGTTTCAGGAGCTCG 60.816 66.667 7.83 0.00 0.00 5.03
2051 2223 1.743252 CTGGGCGTTTCAGGAGCTC 60.743 63.158 4.71 4.71 0.00 4.09
2052 2224 2.348998 CTGGGCGTTTCAGGAGCT 59.651 61.111 0.00 0.00 0.00 4.09
2053 2225 3.435186 GCTGGGCGTTTCAGGAGC 61.435 66.667 0.00 0.00 33.16 4.70
2054 2226 2.747855 GGCTGGGCGTTTCAGGAG 60.748 66.667 0.00 0.00 33.16 3.69
2055 2227 4.344865 GGGCTGGGCGTTTCAGGA 62.345 66.667 0.00 0.00 33.16 3.86
2056 2228 4.659172 TGGGCTGGGCGTTTCAGG 62.659 66.667 0.00 0.00 33.16 3.86
2057 2229 3.058160 CTGGGCTGGGCGTTTCAG 61.058 66.667 0.00 0.00 35.49 3.02
2058 2230 4.659172 CCTGGGCTGGGCGTTTCA 62.659 66.667 0.00 0.00 0.00 2.69
2077 2249 3.423154 GGCAGAAACCGGAGCACG 61.423 66.667 9.46 0.00 43.80 5.34
2078 2250 2.032681 AGGCAGAAACCGGAGCAC 59.967 61.111 9.46 0.00 33.69 4.40
2079 2251 2.347490 GAGGCAGAAACCGGAGCA 59.653 61.111 9.46 0.00 33.69 4.26
2080 2252 2.815647 CGAGGCAGAAACCGGAGC 60.816 66.667 9.46 3.54 33.69 4.70
2081 2253 2.125512 CCGAGGCAGAAACCGGAG 60.126 66.667 9.46 0.00 44.29 4.63
2083 2255 2.125512 CTCCGAGGCAGAAACCGG 60.126 66.667 0.00 0.00 43.02 5.28
2084 2256 0.320421 TTTCTCCGAGGCAGAAACCG 60.320 55.000 10.53 0.00 35.40 4.44
2085 2257 1.892209 TTTTCTCCGAGGCAGAAACC 58.108 50.000 12.80 0.00 39.15 3.27
2102 2274 8.579850 TGCATAGATGTAGGATTGTTCTTTTT 57.420 30.769 0.00 0.00 0.00 1.94
2103 2275 8.579850 TTGCATAGATGTAGGATTGTTCTTTT 57.420 30.769 0.00 0.00 0.00 2.27
2104 2276 7.831193 ACTTGCATAGATGTAGGATTGTTCTTT 59.169 33.333 0.00 0.00 0.00 2.52
2105 2277 7.281774 CACTTGCATAGATGTAGGATTGTTCTT 59.718 37.037 0.00 0.00 0.00 2.52
2106 2278 6.765036 CACTTGCATAGATGTAGGATTGTTCT 59.235 38.462 0.00 0.00 0.00 3.01
2107 2279 6.540189 ACACTTGCATAGATGTAGGATTGTTC 59.460 38.462 0.00 0.00 0.00 3.18
2108 2280 6.418101 ACACTTGCATAGATGTAGGATTGTT 58.582 36.000 0.00 0.00 0.00 2.83
2109 2281 5.994250 ACACTTGCATAGATGTAGGATTGT 58.006 37.500 0.00 0.00 0.00 2.71
2110 2282 6.932356 AACACTTGCATAGATGTAGGATTG 57.068 37.500 0.00 0.00 0.00 2.67
2111 2283 7.394359 ACAAAACACTTGCATAGATGTAGGATT 59.606 33.333 0.00 0.00 0.00 3.01
2112 2284 6.886459 ACAAAACACTTGCATAGATGTAGGAT 59.114 34.615 0.00 0.00 0.00 3.24
2113 2285 6.237901 ACAAAACACTTGCATAGATGTAGGA 58.762 36.000 0.00 0.00 0.00 2.94
2114 2286 6.500684 ACAAAACACTTGCATAGATGTAGG 57.499 37.500 0.00 0.00 0.00 3.18
2115 2287 8.801715 AAAACAAAACACTTGCATAGATGTAG 57.198 30.769 0.00 0.00 0.00 2.74
2150 2322 9.733556 AAGTTCAAGGTTTATTTTGGACTTTTT 57.266 25.926 5.33 0.00 46.07 1.94
2151 2323 9.161629 CAAGTTCAAGGTTTATTTTGGACTTTT 57.838 29.630 7.89 0.00 46.07 2.27
2152 2324 8.318412 ACAAGTTCAAGGTTTATTTTGGACTTT 58.682 29.630 7.89 0.04 46.07 2.66
2154 2326 7.418337 ACAAGTTCAAGGTTTATTTTGGACT 57.582 32.000 0.00 0.00 43.31 3.85
2155 2327 9.589111 TTTACAAGTTCAAGGTTTATTTTGGAC 57.411 29.630 0.00 0.00 33.80 4.02
2162 2334 9.476202 GCTTTGATTTACAAGTTCAAGGTTTAT 57.524 29.630 0.00 0.00 39.77 1.40
2163 2335 8.691797 AGCTTTGATTTACAAGTTCAAGGTTTA 58.308 29.630 0.00 0.00 39.77 2.01
2164 2336 7.555965 AGCTTTGATTTACAAGTTCAAGGTTT 58.444 30.769 0.00 0.00 39.77 3.27
2165 2337 7.112452 AGCTTTGATTTACAAGTTCAAGGTT 57.888 32.000 0.00 0.00 39.77 3.50
2166 2338 6.715347 AGCTTTGATTTACAAGTTCAAGGT 57.285 33.333 0.00 0.00 39.77 3.50
2167 2339 9.696917 ATTTAGCTTTGATTTACAAGTTCAAGG 57.303 29.630 0.00 0.00 39.77 3.61
2169 2341 9.393249 CGATTTAGCTTTGATTTACAAGTTCAA 57.607 29.630 0.00 0.00 39.77 2.69
2170 2342 8.779303 TCGATTTAGCTTTGATTTACAAGTTCA 58.221 29.630 0.00 0.00 39.77 3.18
2171 2343 9.607285 TTCGATTTAGCTTTGATTTACAAGTTC 57.393 29.630 0.00 0.00 39.77 3.01
2172 2344 9.394477 GTTCGATTTAGCTTTGATTTACAAGTT 57.606 29.630 0.00 0.00 39.77 2.66
2173 2345 8.021396 GGTTCGATTTAGCTTTGATTTACAAGT 58.979 33.333 0.00 0.00 39.77 3.16
2174 2346 7.484959 GGGTTCGATTTAGCTTTGATTTACAAG 59.515 37.037 0.00 0.00 39.77 3.16
2175 2347 7.175990 AGGGTTCGATTTAGCTTTGATTTACAA 59.824 33.333 0.00 0.00 36.65 2.41
2176 2348 6.657541 AGGGTTCGATTTAGCTTTGATTTACA 59.342 34.615 0.00 0.00 0.00 2.41
2177 2349 6.967199 CAGGGTTCGATTTAGCTTTGATTTAC 59.033 38.462 0.00 0.00 0.00 2.01
2178 2350 6.882140 TCAGGGTTCGATTTAGCTTTGATTTA 59.118 34.615 0.00 0.00 0.00 1.40
2179 2351 5.710099 TCAGGGTTCGATTTAGCTTTGATTT 59.290 36.000 0.00 0.00 0.00 2.17
2180 2352 5.253330 TCAGGGTTCGATTTAGCTTTGATT 58.747 37.500 0.00 0.00 0.00 2.57
2181 2353 4.843728 TCAGGGTTCGATTTAGCTTTGAT 58.156 39.130 0.00 0.00 0.00 2.57
2182 2354 4.280436 TCAGGGTTCGATTTAGCTTTGA 57.720 40.909 0.00 0.00 0.00 2.69
2183 2355 5.449177 GGATTCAGGGTTCGATTTAGCTTTG 60.449 44.000 0.00 0.00 0.00 2.77
2184 2356 4.640647 GGATTCAGGGTTCGATTTAGCTTT 59.359 41.667 0.00 0.00 0.00 3.51
2185 2357 4.200092 GGATTCAGGGTTCGATTTAGCTT 58.800 43.478 0.00 0.00 0.00 3.74
2186 2358 3.433740 GGGATTCAGGGTTCGATTTAGCT 60.434 47.826 0.00 0.00 0.00 3.32
2187 2359 2.879026 GGGATTCAGGGTTCGATTTAGC 59.121 50.000 0.00 0.00 0.00 3.09
2188 2360 3.131396 CGGGATTCAGGGTTCGATTTAG 58.869 50.000 0.00 0.00 0.00 1.85
2189 2361 2.158871 CCGGGATTCAGGGTTCGATTTA 60.159 50.000 0.00 0.00 0.00 1.40
2190 2362 1.408266 CCGGGATTCAGGGTTCGATTT 60.408 52.381 0.00 0.00 0.00 2.17
2191 2363 0.180406 CCGGGATTCAGGGTTCGATT 59.820 55.000 0.00 0.00 0.00 3.34
2192 2364 0.981277 ACCGGGATTCAGGGTTCGAT 60.981 55.000 6.32 0.00 0.00 3.59
2193 2365 1.196104 AACCGGGATTCAGGGTTCGA 61.196 55.000 6.32 0.00 39.82 3.71
2194 2366 0.322187 AAACCGGGATTCAGGGTTCG 60.322 55.000 6.32 0.00 42.97 3.95
2195 2367 2.793288 TAAACCGGGATTCAGGGTTC 57.207 50.000 6.32 0.00 42.97 3.62
2196 2368 5.397553 AATATAAACCGGGATTCAGGGTT 57.602 39.130 6.32 0.00 45.58 4.11
2197 2369 6.518516 TTAATATAAACCGGGATTCAGGGT 57.481 37.500 6.32 0.00 34.99 4.34
2198 2370 6.208007 GGTTTAATATAAACCGGGATTCAGGG 59.792 42.308 14.34 0.00 40.10 4.45
2199 2371 7.210718 GGTTTAATATAAACCGGGATTCAGG 57.789 40.000 14.34 0.00 40.10 3.86
2232 2404 5.107104 CCATGTCGACAATCTCTTCGAAAAA 60.107 40.000 24.13 0.00 45.35 1.94
2233 2405 4.388773 CCATGTCGACAATCTCTTCGAAAA 59.611 41.667 24.13 0.00 45.35 2.29
2234 2406 3.926527 CCATGTCGACAATCTCTTCGAAA 59.073 43.478 24.13 0.00 45.35 3.46
2235 2407 3.511699 CCATGTCGACAATCTCTTCGAA 58.488 45.455 24.13 0.00 45.35 3.71
2236 2408 2.735444 GCCATGTCGACAATCTCTTCGA 60.735 50.000 24.13 0.00 41.83 3.71
2237 2409 1.590238 GCCATGTCGACAATCTCTTCG 59.410 52.381 24.13 0.00 36.55 3.79
2238 2410 2.606725 CTGCCATGTCGACAATCTCTTC 59.393 50.000 24.13 8.16 0.00 2.87
2239 2411 2.625737 CTGCCATGTCGACAATCTCTT 58.374 47.619 24.13 0.98 0.00 2.85
2240 2412 1.741732 GCTGCCATGTCGACAATCTCT 60.742 52.381 24.13 1.85 0.00 3.10
2241 2413 0.654683 GCTGCCATGTCGACAATCTC 59.345 55.000 24.13 12.31 0.00 2.75
2242 2414 0.251354 AGCTGCCATGTCGACAATCT 59.749 50.000 24.13 2.74 0.00 2.40
2243 2415 0.376152 CAGCTGCCATGTCGACAATC 59.624 55.000 24.13 14.44 0.00 2.67
2244 2416 1.028330 CCAGCTGCCATGTCGACAAT 61.028 55.000 24.13 8.50 0.00 2.71
2245 2417 1.672030 CCAGCTGCCATGTCGACAA 60.672 57.895 24.13 4.74 0.00 3.18
2246 2418 2.046988 CCAGCTGCCATGTCGACA 60.047 61.111 22.48 22.48 0.00 4.35
2247 2419 2.046892 ACCAGCTGCCATGTCGAC 60.047 61.111 8.66 9.11 0.00 4.20
2248 2420 2.265739 GACCAGCTGCCATGTCGA 59.734 61.111 8.66 0.00 0.00 4.20
2249 2421 3.190849 CGACCAGCTGCCATGTCG 61.191 66.667 22.68 22.68 43.64 4.35
2250 2422 1.375908 TTCGACCAGCTGCCATGTC 60.376 57.895 8.66 9.45 0.00 3.06
2251 2423 1.672356 GTTCGACCAGCTGCCATGT 60.672 57.895 8.66 0.00 0.00 3.21
2252 2424 2.401766 GGTTCGACCAGCTGCCATG 61.402 63.158 8.66 0.00 38.42 3.66
2253 2425 2.045926 GGTTCGACCAGCTGCCAT 60.046 61.111 8.66 0.00 38.42 4.40
2254 2426 4.680237 CGGTTCGACCAGCTGCCA 62.680 66.667 8.66 0.00 38.47 4.92
2257 2429 1.672854 TATCCCGGTTCGACCAGCTG 61.673 60.000 6.78 6.78 38.47 4.24
2258 2430 1.380785 TATCCCGGTTCGACCAGCT 60.381 57.895 0.00 0.00 38.47 4.24
2259 2431 1.067582 CTATCCCGGTTCGACCAGC 59.932 63.158 0.00 0.00 38.47 4.85
2260 2432 1.067582 GCTATCCCGGTTCGACCAG 59.932 63.158 0.00 0.00 38.47 4.00
2261 2433 1.380785 AGCTATCCCGGTTCGACCA 60.381 57.895 0.00 0.00 38.47 4.02
2262 2434 1.067582 CAGCTATCCCGGTTCGACC 59.932 63.158 0.00 0.00 34.05 4.79
2263 2435 1.067582 CCAGCTATCCCGGTTCGAC 59.932 63.158 0.00 0.00 0.00 4.20
2264 2436 2.792947 GCCAGCTATCCCGGTTCGA 61.793 63.158 0.00 0.00 0.00 3.71
2265 2437 2.280186 GCCAGCTATCCCGGTTCG 60.280 66.667 0.00 0.00 0.00 3.95
2266 2438 2.280186 CGCCAGCTATCCCGGTTC 60.280 66.667 0.00 0.00 0.00 3.62
2267 2439 2.762459 TCGCCAGCTATCCCGGTT 60.762 61.111 0.00 0.00 0.00 4.44
2268 2440 3.537874 GTCGCCAGCTATCCCGGT 61.538 66.667 0.00 0.00 0.00 5.28
2269 2441 3.227276 AGTCGCCAGCTATCCCGG 61.227 66.667 0.00 0.00 0.00 5.73
2270 2442 2.028190 CAGTCGCCAGCTATCCCG 59.972 66.667 0.00 0.00 0.00 5.14
2271 2443 2.423446 CCAGTCGCCAGCTATCCC 59.577 66.667 0.00 0.00 0.00 3.85
2272 2444 2.423446 CCCAGTCGCCAGCTATCC 59.577 66.667 0.00 0.00 0.00 2.59
2273 2445 2.280457 GCCCAGTCGCCAGCTATC 60.280 66.667 0.00 0.00 0.00 2.08
2290 2462 1.897615 TTAACGTTTGGTGGGCCGG 60.898 57.895 5.91 0.00 37.67 6.13
2291 2463 1.283487 GTTAACGTTTGGTGGGCCG 59.717 57.895 5.91 0.00 37.67 6.13
2292 2464 0.963225 ATGTTAACGTTTGGTGGGCC 59.037 50.000 5.91 0.00 0.00 5.80
2293 2465 1.338655 ACATGTTAACGTTTGGTGGGC 59.661 47.619 5.91 0.00 0.00 5.36
2294 2466 3.719173 AACATGTTAACGTTTGGTGGG 57.281 42.857 9.97 0.00 0.00 4.61
2295 2467 5.808030 AGAAAAACATGTTAACGTTTGGTGG 59.192 36.000 12.39 0.00 35.57 4.61
2296 2468 6.879188 AGAAAAACATGTTAACGTTTGGTG 57.121 33.333 12.39 3.65 35.57 4.17
2297 2469 7.892778 AAAGAAAAACATGTTAACGTTTGGT 57.107 28.000 12.39 0.00 35.57 3.67
2298 2470 8.436200 TCAAAAGAAAAACATGTTAACGTTTGG 58.564 29.630 27.51 18.27 35.57 3.28
2299 2471 9.245284 GTCAAAAGAAAAACATGTTAACGTTTG 57.755 29.630 25.29 25.29 35.57 2.93
2300 2472 9.198837 AGTCAAAAGAAAAACATGTTAACGTTT 57.801 25.926 12.39 8.58 36.92 3.60
2301 2473 8.643752 CAGTCAAAAGAAAAACATGTTAACGTT 58.356 29.630 12.39 5.88 0.00 3.99
2302 2474 8.024285 TCAGTCAAAAGAAAAACATGTTAACGT 58.976 29.630 12.39 0.00 0.00 3.99
2303 2475 8.388319 TCAGTCAAAAGAAAAACATGTTAACG 57.612 30.769 12.39 0.00 0.00 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.