Multiple sequence alignment - TraesCS5B01G304800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G304800 chr5B 100.000 2577 0 0 1 2577 488819180 488821756 0.000000e+00 4759
1 TraesCS5B01G304800 chr5B 90.423 449 27 10 1 435 417015443 417014997 6.180000e-161 577
2 TraesCS5B01G304800 chr5B 89.310 449 30 10 1 435 173932048 173931604 4.850000e-152 547
3 TraesCS5B01G304800 chr5B 88.667 450 36 10 1 435 79752109 79752558 3.770000e-148 534
4 TraesCS5B01G304800 chr5B 88.864 449 29 6 1 435 488746106 488746547 1.360000e-147 532
5 TraesCS5B01G304800 chr5B 89.549 421 29 2 1 407 198122499 198122080 1.060000e-143 520
6 TraesCS5B01G304800 chr5A 89.076 1785 115 33 852 2577 513225913 513227676 0.000000e+00 2143
7 TraesCS5B01G304800 chr5D 92.533 750 48 5 858 1605 407755340 407756083 0.000000e+00 1068
8 TraesCS5B01G304800 chr5D 95.360 625 26 1 1953 2577 407756441 407757062 0.000000e+00 990
9 TraesCS5B01G304800 chr5D 93.868 424 23 3 1279 1702 407772629 407773049 1.010000e-178 636
10 TraesCS5B01G304800 chr5D 85.633 529 67 8 2026 2550 407773493 407774016 4.850000e-152 547
11 TraesCS5B01G304800 chr5D 83.484 442 57 7 8 435 453399546 453399985 5.170000e-107 398
12 TraesCS5B01G304800 chr5D 82.723 191 17 6 259 435 453400506 453400694 3.430000e-34 156
13 TraesCS5B01G304800 chr2B 90.787 445 23 9 2 432 164599859 164600299 1.720000e-161 579
14 TraesCS5B01G304800 chr2B 88.864 449 29 10 1 435 648091703 648091262 1.360000e-147 532
15 TraesCS5B01G304800 chr3B 89.532 449 28 10 1 435 508129818 508130261 3.750000e-153 551
16 TraesCS5B01G304800 chr3B 90.168 417 27 1 1 403 333445623 333446039 4.880000e-147 531
17 TraesCS5B01G304800 chr3B 88.000 450 38 9 1 435 532238843 532238395 3.800000e-143 518
18 TraesCS5B01G304800 chr7B 89.087 449 28 12 1 435 750324423 750323982 2.920000e-149 538
19 TraesCS5B01G304800 chr7B 88.641 449 34 8 1 435 338832699 338833144 4.880000e-147 531
20 TraesCS5B01G304800 chr7B 89.928 417 28 4 1 403 45975500 45975916 2.270000e-145 525
21 TraesCS5B01G304800 chr6B 88.641 449 34 9 1 435 302591693 302592138 4.880000e-147 531
22 TraesCS5B01G304800 chr1B 88.641 449 28 10 1 435 238890341 238890780 2.270000e-145 525
23 TraesCS5B01G304800 chr4D 81.920 448 62 6 2 435 316917582 316918024 6.780000e-96 361


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G304800 chr5B 488819180 488821756 2576 False 4759.0 4759 100.0000 1 2577 1 chr5B.!!$F3 2576
1 TraesCS5B01G304800 chr5A 513225913 513227676 1763 False 2143.0 2143 89.0760 852 2577 1 chr5A.!!$F1 1725
2 TraesCS5B01G304800 chr5D 407755340 407757062 1722 False 1029.0 1068 93.9465 858 2577 2 chr5D.!!$F1 1719
3 TraesCS5B01G304800 chr5D 407772629 407774016 1387 False 591.5 636 89.7505 1279 2550 2 chr5D.!!$F2 1271
4 TraesCS5B01G304800 chr5D 453399546 453400694 1148 False 277.0 398 83.1035 8 435 2 chr5D.!!$F3 427

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
786 801 0.032267 GGACATTCCTCGGTCGATCC 59.968 60.0 0.0 0.0 34.87 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2018 2298 0.472898 TCTAGGAGCTAGCCTACGCA 59.527 55.0 12.13 0.0 39.5 5.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.020039 TCCTTGAGTTTAAATACTCGGCCA 60.020 41.667 2.24 0.00 46.00 5.36
51 52 2.503920 ACCAGACGTACAACTGTCAC 57.496 50.000 12.95 0.00 37.58 3.67
79 80 6.306987 AGTTGAAACTGGTCTACCAAATCAT 58.693 36.000 2.97 0.00 46.97 2.45
88 89 5.705441 TGGTCTACCAAATCATTGTCTTCAC 59.295 40.000 0.00 0.00 44.35 3.18
90 91 5.705441 GTCTACCAAATCATTGTCTTCACCA 59.295 40.000 0.00 0.00 34.60 4.17
93 94 4.895297 ACCAAATCATTGTCTTCACCAAGT 59.105 37.500 0.00 0.00 34.60 3.16
94 95 5.010012 ACCAAATCATTGTCTTCACCAAGTC 59.990 40.000 0.00 0.00 34.60 3.01
95 96 5.009911 CCAAATCATTGTCTTCACCAAGTCA 59.990 40.000 0.00 0.00 34.60 3.41
99 100 4.576053 TCATTGTCTTCACCAAGTCAACTG 59.424 41.667 0.00 0.10 39.49 3.16
116 117 5.998363 GTCAACTGGTTCTATTTCCTCAACT 59.002 40.000 0.00 0.00 0.00 3.16
120 121 6.842676 ACTGGTTCTATTTCCTCAACTCTTT 58.157 36.000 0.00 0.00 0.00 2.52
130 131 4.569943 TCCTCAACTCTTTCATTTCCTCG 58.430 43.478 0.00 0.00 0.00 4.63
136 137 5.869753 ACTCTTTCATTTCCTCGTTCATG 57.130 39.130 0.00 0.00 0.00 3.07
138 139 5.180117 ACTCTTTCATTTCCTCGTTCATGTG 59.820 40.000 0.00 0.00 0.00 3.21
139 140 5.063204 TCTTTCATTTCCTCGTTCATGTGT 58.937 37.500 0.00 0.00 0.00 3.72
140 141 5.179368 TCTTTCATTTCCTCGTTCATGTGTC 59.821 40.000 0.00 0.00 0.00 3.67
142 143 2.804697 TTTCCTCGTTCATGTGTCGA 57.195 45.000 0.00 1.29 0.00 4.20
145 146 1.816224 TCCTCGTTCATGTGTCGATGA 59.184 47.619 9.15 9.19 33.26 2.92
154 155 3.195396 TCATGTGTCGATGAACCTGATCA 59.805 43.478 0.00 0.00 29.11 2.92
171 172 7.227156 ACCTGATCATTACTGTTTGAAGACTT 58.773 34.615 0.00 0.00 0.00 3.01
177 178 9.778741 ATCATTACTGTTTGAAGACTTTGACTA 57.221 29.630 0.00 0.00 0.00 2.59
182 183 8.738645 ACTGTTTGAAGACTTTGACTAAAGAT 57.261 30.769 6.77 0.00 44.87 2.40
189 190 9.838339 TGAAGACTTTGACTAAAGATTTTCTCT 57.162 29.630 6.77 0.00 44.87 3.10
205 206 9.933240 AGATTTTCTCTATTTCCTCAATCCAAT 57.067 29.630 0.00 0.00 30.26 3.16
218 219 5.474532 CCTCAATCCAATTTCTTCAGTCACA 59.525 40.000 0.00 0.00 0.00 3.58
220 221 7.337689 CCTCAATCCAATTTCTTCAGTCACATA 59.662 37.037 0.00 0.00 0.00 2.29
233 234 3.056250 CAGTCACATAGTCTTCAGCCTGT 60.056 47.826 0.00 0.00 0.00 4.00
243 244 4.042187 AGTCTTCAGCCTGTTTATCCTGTT 59.958 41.667 0.00 0.00 0.00 3.16
246 247 5.473504 TCTTCAGCCTGTTTATCCTGTTTTC 59.526 40.000 0.00 0.00 0.00 2.29
248 249 5.324409 TCAGCCTGTTTATCCTGTTTTCAT 58.676 37.500 0.00 0.00 0.00 2.57
250 251 5.183713 CAGCCTGTTTATCCTGTTTTCATGA 59.816 40.000 0.00 0.00 0.00 3.07
253 254 7.781693 AGCCTGTTTATCCTGTTTTCATGATAT 59.218 33.333 0.00 0.00 37.31 1.63
254 255 8.078596 GCCTGTTTATCCTGTTTTCATGATATC 58.921 37.037 0.00 0.00 37.31 1.63
264 265 7.042187 CCTGTTTTCATGATATCTGTACTCTGC 60.042 40.741 3.98 0.00 0.00 4.26
266 267 5.774498 TTCATGATATCTGTACTCTGCGT 57.226 39.130 3.98 0.00 0.00 5.24
298 299 8.741603 TCATTTCATCATGATGACTATGTTGT 57.258 30.769 33.25 17.95 46.49 3.32
300 301 9.233232 CATTTCATCATGATGACTATGTTGTTG 57.767 33.333 33.02 16.05 46.49 3.33
314 315 6.878923 ACTATGTTGTTGCTCTGTTATGCTTA 59.121 34.615 0.00 0.00 0.00 3.09
315 316 6.764308 ATGTTGTTGCTCTGTTATGCTTAT 57.236 33.333 0.00 0.00 0.00 1.73
317 318 7.072177 TGTTGTTGCTCTGTTATGCTTATAC 57.928 36.000 0.00 0.00 0.00 1.47
320 321 7.119709 TGTTGCTCTGTTATGCTTATACCTA 57.880 36.000 0.00 0.00 0.00 3.08
322 323 8.210946 TGTTGCTCTGTTATGCTTATACCTAAT 58.789 33.333 0.00 0.00 0.00 1.73
356 371 5.642063 CGTTGCTTAGGAATTTCTTCACCTA 59.358 40.000 0.00 0.00 34.42 3.08
359 374 7.200434 TGCTTAGGAATTTCTTCACCTAGAT 57.800 36.000 0.00 0.00 36.55 1.98
389 404 6.950545 TCAGTGACGAATTTGTAAAAATCGT 58.049 32.000 13.84 13.84 42.89 3.73
435 450 6.967135 TCTAGTCGATATAACGCACTTTCAT 58.033 36.000 10.84 0.00 0.00 2.57
437 452 6.988109 AGTCGATATAACGCACTTTCATAC 57.012 37.500 0.00 0.00 0.00 2.39
438 453 5.624081 AGTCGATATAACGCACTTTCATACG 59.376 40.000 0.00 0.00 0.00 3.06
439 454 5.622448 GTCGATATAACGCACTTTCATACGA 59.378 40.000 0.00 0.00 0.00 3.43
440 455 5.622448 TCGATATAACGCACTTTCATACGAC 59.378 40.000 0.00 0.00 0.00 4.34
441 456 5.624081 CGATATAACGCACTTTCATACGACT 59.376 40.000 0.00 0.00 0.00 4.18
442 457 6.397584 CGATATAACGCACTTTCATACGACTG 60.398 42.308 0.00 0.00 0.00 3.51
443 458 2.717580 ACGCACTTTCATACGACTGA 57.282 45.000 0.00 0.00 0.00 3.41
444 459 3.232213 ACGCACTTTCATACGACTGAT 57.768 42.857 0.00 0.00 0.00 2.90
446 461 3.994392 ACGCACTTTCATACGACTGATTT 59.006 39.130 0.00 0.00 0.00 2.17
447 462 4.091509 ACGCACTTTCATACGACTGATTTC 59.908 41.667 0.00 0.00 0.00 2.17
449 464 5.554636 GCACTTTCATACGACTGATTTCTG 58.445 41.667 0.00 0.00 0.00 3.02
450 465 5.446473 GCACTTTCATACGACTGATTTCTGG 60.446 44.000 0.00 0.00 0.00 3.86
451 466 5.869344 CACTTTCATACGACTGATTTCTGGA 59.131 40.000 0.00 0.00 0.00 3.86
452 467 5.869888 ACTTTCATACGACTGATTTCTGGAC 59.130 40.000 0.00 0.00 0.00 4.02
453 468 4.028852 TCATACGACTGATTTCTGGACG 57.971 45.455 0.00 0.00 0.00 4.79
454 469 3.692593 TCATACGACTGATTTCTGGACGA 59.307 43.478 0.00 0.00 0.00 4.20
455 470 2.349297 ACGACTGATTTCTGGACGAC 57.651 50.000 0.00 0.00 0.00 4.34
456 471 1.611977 ACGACTGATTTCTGGACGACA 59.388 47.619 0.00 0.00 0.00 4.35
457 472 1.986378 CGACTGATTTCTGGACGACAC 59.014 52.381 0.00 0.00 0.00 3.67
458 473 1.986378 GACTGATTTCTGGACGACACG 59.014 52.381 0.00 0.00 0.00 4.49
459 474 1.611977 ACTGATTTCTGGACGACACGA 59.388 47.619 0.00 0.00 0.00 4.35
460 475 2.035449 ACTGATTTCTGGACGACACGAA 59.965 45.455 0.00 0.00 0.00 3.85
461 476 3.057019 CTGATTTCTGGACGACACGAAA 58.943 45.455 0.00 0.00 33.73 3.46
462 477 3.659786 TGATTTCTGGACGACACGAAAT 58.340 40.909 11.22 11.22 38.47 2.17
463 478 4.062293 TGATTTCTGGACGACACGAAATT 58.938 39.130 12.16 1.64 37.21 1.82
464 479 3.870723 TTTCTGGACGACACGAAATTG 57.129 42.857 0.00 0.00 0.00 2.32
465 480 1.144969 TCTGGACGACACGAAATTGC 58.855 50.000 0.00 0.00 0.00 3.56
466 481 0.865111 CTGGACGACACGAAATTGCA 59.135 50.000 0.00 0.00 0.00 4.08
467 482 0.865111 TGGACGACACGAAATTGCAG 59.135 50.000 0.00 0.00 0.00 4.41
468 483 0.452784 GGACGACACGAAATTGCAGC 60.453 55.000 0.00 0.00 0.00 5.25
469 484 0.452784 GACGACACGAAATTGCAGCC 60.453 55.000 0.00 0.00 0.00 4.85
470 485 1.163420 ACGACACGAAATTGCAGCCA 61.163 50.000 0.00 0.00 0.00 4.75
471 486 0.168788 CGACACGAAATTGCAGCCAT 59.831 50.000 0.00 0.00 0.00 4.40
472 487 1.396648 CGACACGAAATTGCAGCCATA 59.603 47.619 0.00 0.00 0.00 2.74
473 488 2.032054 CGACACGAAATTGCAGCCATAT 59.968 45.455 0.00 0.00 0.00 1.78
474 489 3.247411 CGACACGAAATTGCAGCCATATA 59.753 43.478 0.00 0.00 0.00 0.86
475 490 4.527564 GACACGAAATTGCAGCCATATAC 58.472 43.478 0.00 0.00 0.00 1.47
476 491 3.315191 ACACGAAATTGCAGCCATATACC 59.685 43.478 0.00 0.00 0.00 2.73
477 492 2.884639 ACGAAATTGCAGCCATATACCC 59.115 45.455 0.00 0.00 0.00 3.69
478 493 2.095768 CGAAATTGCAGCCATATACCCG 60.096 50.000 0.00 0.00 0.00 5.28
479 494 2.656947 AATTGCAGCCATATACCCGT 57.343 45.000 0.00 0.00 0.00 5.28
480 495 1.896220 ATTGCAGCCATATACCCGTG 58.104 50.000 0.00 0.00 0.00 4.94
481 496 0.544223 TTGCAGCCATATACCCGTGT 59.456 50.000 0.00 0.00 0.00 4.49
482 497 0.544223 TGCAGCCATATACCCGTGTT 59.456 50.000 0.00 0.00 0.00 3.32
483 498 0.944386 GCAGCCATATACCCGTGTTG 59.056 55.000 0.00 0.00 0.00 3.33
484 499 1.745827 GCAGCCATATACCCGTGTTGT 60.746 52.381 0.00 0.00 0.00 3.32
485 500 2.639065 CAGCCATATACCCGTGTTGTT 58.361 47.619 0.00 0.00 0.00 2.83
486 501 2.354510 CAGCCATATACCCGTGTTGTTG 59.645 50.000 0.00 0.00 0.00 3.33
487 502 2.237643 AGCCATATACCCGTGTTGTTGA 59.762 45.455 0.00 0.00 0.00 3.18
488 503 2.612212 GCCATATACCCGTGTTGTTGAG 59.388 50.000 0.00 0.00 0.00 3.02
489 504 3.869065 CCATATACCCGTGTTGTTGAGT 58.131 45.455 0.00 0.00 0.00 3.41
490 505 3.621268 CCATATACCCGTGTTGTTGAGTG 59.379 47.826 0.00 0.00 0.00 3.51
491 506 2.178912 ATACCCGTGTTGTTGAGTGG 57.821 50.000 0.00 0.00 0.00 4.00
492 507 0.107081 TACCCGTGTTGTTGAGTGGG 59.893 55.000 0.00 0.00 42.50 4.61
493 508 2.551912 CCCGTGTTGTTGAGTGGGC 61.552 63.158 0.00 0.00 0.00 5.36
494 509 1.525995 CCGTGTTGTTGAGTGGGCT 60.526 57.895 0.00 0.00 0.00 5.19
495 510 0.250124 CCGTGTTGTTGAGTGGGCTA 60.250 55.000 0.00 0.00 0.00 3.93
496 511 0.865769 CGTGTTGTTGAGTGGGCTAC 59.134 55.000 0.00 0.00 0.00 3.58
497 512 1.808512 CGTGTTGTTGAGTGGGCTACA 60.809 52.381 3.15 0.00 0.00 2.74
498 513 2.294074 GTGTTGTTGAGTGGGCTACAA 58.706 47.619 3.15 0.00 32.58 2.41
499 514 2.032924 GTGTTGTTGAGTGGGCTACAAC 59.967 50.000 3.15 12.53 46.95 3.32
500 515 1.607148 GTTGTTGAGTGGGCTACAACC 59.393 52.381 3.15 0.00 43.68 3.77
501 516 0.250124 TGTTGAGTGGGCTACAACCG 60.250 55.000 3.15 0.00 41.82 4.44
502 517 1.302192 TTGAGTGGGCTACAACCGC 60.302 57.895 3.15 0.00 38.78 5.68
504 519 2.347490 AGTGGGCTACAACCGCTG 59.653 61.111 3.15 0.00 46.49 5.18
505 520 2.214216 AGTGGGCTACAACCGCTGA 61.214 57.895 3.15 0.00 46.49 4.26
506 521 1.078426 GTGGGCTACAACCGCTGAT 60.078 57.895 0.00 0.00 35.64 2.90
507 522 1.090052 GTGGGCTACAACCGCTGATC 61.090 60.000 0.00 0.00 35.64 2.92
508 523 1.523938 GGGCTACAACCGCTGATCC 60.524 63.158 0.00 0.00 0.00 3.36
509 524 1.522569 GGCTACAACCGCTGATCCT 59.477 57.895 0.00 0.00 0.00 3.24
510 525 0.750850 GGCTACAACCGCTGATCCTA 59.249 55.000 0.00 0.00 0.00 2.94
511 526 1.138266 GGCTACAACCGCTGATCCTAA 59.862 52.381 0.00 0.00 0.00 2.69
512 527 2.474816 GCTACAACCGCTGATCCTAAG 58.525 52.381 0.00 0.00 0.00 2.18
513 528 2.159085 GCTACAACCGCTGATCCTAAGT 60.159 50.000 0.00 0.00 0.00 2.24
514 529 2.386661 ACAACCGCTGATCCTAAGTG 57.613 50.000 0.00 0.00 0.00 3.16
515 530 1.623811 ACAACCGCTGATCCTAAGTGT 59.376 47.619 0.00 0.00 0.00 3.55
516 531 2.271800 CAACCGCTGATCCTAAGTGTC 58.728 52.381 0.00 0.00 0.00 3.67
517 532 0.456221 ACCGCTGATCCTAAGTGTCG 59.544 55.000 0.00 0.00 0.00 4.35
518 533 0.456221 CCGCTGATCCTAAGTGTCGT 59.544 55.000 0.00 0.00 0.00 4.34
519 534 1.550065 CGCTGATCCTAAGTGTCGTG 58.450 55.000 0.00 0.00 0.00 4.35
520 535 1.135373 CGCTGATCCTAAGTGTCGTGT 60.135 52.381 0.00 0.00 0.00 4.49
521 536 2.263077 GCTGATCCTAAGTGTCGTGTG 58.737 52.381 0.00 0.00 0.00 3.82
522 537 2.094700 GCTGATCCTAAGTGTCGTGTGA 60.095 50.000 0.00 0.00 0.00 3.58
523 538 3.429547 GCTGATCCTAAGTGTCGTGTGAT 60.430 47.826 0.00 0.00 0.00 3.06
524 539 4.748892 CTGATCCTAAGTGTCGTGTGATT 58.251 43.478 0.00 0.00 0.00 2.57
525 540 5.147330 TGATCCTAAGTGTCGTGTGATTT 57.853 39.130 0.00 0.00 0.00 2.17
526 541 5.547465 TGATCCTAAGTGTCGTGTGATTTT 58.453 37.500 0.00 0.00 0.00 1.82
527 542 5.995282 TGATCCTAAGTGTCGTGTGATTTTT 59.005 36.000 0.00 0.00 0.00 1.94
528 543 5.666969 TCCTAAGTGTCGTGTGATTTTTG 57.333 39.130 0.00 0.00 0.00 2.44
529 544 5.120399 TCCTAAGTGTCGTGTGATTTTTGT 58.880 37.500 0.00 0.00 0.00 2.83
530 545 5.587043 TCCTAAGTGTCGTGTGATTTTTGTT 59.413 36.000 0.00 0.00 0.00 2.83
531 546 5.907391 CCTAAGTGTCGTGTGATTTTTGTTC 59.093 40.000 0.00 0.00 0.00 3.18
532 547 5.560966 AAGTGTCGTGTGATTTTTGTTCT 57.439 34.783 0.00 0.00 0.00 3.01
533 548 5.156804 AGTGTCGTGTGATTTTTGTTCTC 57.843 39.130 0.00 0.00 0.00 2.87
534 549 4.035208 AGTGTCGTGTGATTTTTGTTCTCC 59.965 41.667 0.00 0.00 0.00 3.71
535 550 3.942115 TGTCGTGTGATTTTTGTTCTCCA 59.058 39.130 0.00 0.00 0.00 3.86
536 551 4.201871 TGTCGTGTGATTTTTGTTCTCCAC 60.202 41.667 0.00 0.00 0.00 4.02
537 552 4.035208 GTCGTGTGATTTTTGTTCTCCACT 59.965 41.667 0.00 0.00 0.00 4.00
538 553 4.272504 TCGTGTGATTTTTGTTCTCCACTC 59.727 41.667 0.00 0.00 0.00 3.51
539 554 4.554723 CGTGTGATTTTTGTTCTCCACTCC 60.555 45.833 0.00 0.00 0.00 3.85
540 555 4.338118 GTGTGATTTTTGTTCTCCACTCCA 59.662 41.667 0.00 0.00 0.00 3.86
541 556 5.010012 GTGTGATTTTTGTTCTCCACTCCAT 59.990 40.000 0.00 0.00 0.00 3.41
542 557 5.241506 TGTGATTTTTGTTCTCCACTCCATC 59.758 40.000 0.00 0.00 0.00 3.51
543 558 4.455533 TGATTTTTGTTCTCCACTCCATCG 59.544 41.667 0.00 0.00 0.00 3.84
544 559 1.808411 TTTGTTCTCCACTCCATCGC 58.192 50.000 0.00 0.00 0.00 4.58
545 560 0.036388 TTGTTCTCCACTCCATCGCC 60.036 55.000 0.00 0.00 0.00 5.54
546 561 1.153349 GTTCTCCACTCCATCGCCC 60.153 63.158 0.00 0.00 0.00 6.13
547 562 2.721167 TTCTCCACTCCATCGCCCG 61.721 63.158 0.00 0.00 0.00 6.13
548 563 4.899239 CTCCACTCCATCGCCCGC 62.899 72.222 0.00 0.00 0.00 6.13
551 566 4.758251 CACTCCATCGCCCGCACA 62.758 66.667 0.00 0.00 0.00 4.57
552 567 3.785859 ACTCCATCGCCCGCACAT 61.786 61.111 0.00 0.00 0.00 3.21
553 568 2.514592 CTCCATCGCCCGCACATT 60.515 61.111 0.00 0.00 0.00 2.71
554 569 1.227527 CTCCATCGCCCGCACATTA 60.228 57.895 0.00 0.00 0.00 1.90
555 570 0.813610 CTCCATCGCCCGCACATTAA 60.814 55.000 0.00 0.00 0.00 1.40
556 571 0.179032 TCCATCGCCCGCACATTAAT 60.179 50.000 0.00 0.00 0.00 1.40
557 572 0.667993 CCATCGCCCGCACATTAATT 59.332 50.000 0.00 0.00 0.00 1.40
558 573 1.334960 CCATCGCCCGCACATTAATTC 60.335 52.381 0.00 0.00 0.00 2.17
559 574 0.951558 ATCGCCCGCACATTAATTCC 59.048 50.000 0.00 0.00 0.00 3.01
560 575 1.010125 CGCCCGCACATTAATTCCG 60.010 57.895 0.00 0.00 0.00 4.30
561 576 1.433053 CGCCCGCACATTAATTCCGA 61.433 55.000 0.00 0.00 0.00 4.55
562 577 0.736053 GCCCGCACATTAATTCCGAA 59.264 50.000 0.00 0.00 0.00 4.30
563 578 1.133407 GCCCGCACATTAATTCCGAAA 59.867 47.619 0.00 0.00 0.00 3.46
564 579 2.792749 CCCGCACATTAATTCCGAAAC 58.207 47.619 0.00 0.00 0.00 2.78
565 580 2.422127 CCCGCACATTAATTCCGAAACT 59.578 45.455 0.00 0.00 0.00 2.66
566 581 3.119637 CCCGCACATTAATTCCGAAACTT 60.120 43.478 0.00 0.00 0.00 2.66
567 582 4.095185 CCCGCACATTAATTCCGAAACTTA 59.905 41.667 0.00 0.00 0.00 2.24
568 583 5.263185 CCGCACATTAATTCCGAAACTTAG 58.737 41.667 0.00 0.00 0.00 2.18
569 584 5.064198 CCGCACATTAATTCCGAAACTTAGA 59.936 40.000 0.00 0.00 0.00 2.10
570 585 6.402766 CCGCACATTAATTCCGAAACTTAGAA 60.403 38.462 0.00 0.00 0.00 2.10
571 586 6.464834 CGCACATTAATTCCGAAACTTAGAAC 59.535 38.462 0.00 0.00 0.00 3.01
572 587 7.527457 GCACATTAATTCCGAAACTTAGAACT 58.473 34.615 0.00 0.00 0.00 3.01
573 588 8.021396 GCACATTAATTCCGAAACTTAGAACTT 58.979 33.333 0.00 0.00 0.00 2.66
574 589 9.329913 CACATTAATTCCGAAACTTAGAACTTG 57.670 33.333 0.00 0.00 0.00 3.16
575 590 8.512138 ACATTAATTCCGAAACTTAGAACTTGG 58.488 33.333 0.00 0.00 0.00 3.61
576 591 8.512138 CATTAATTCCGAAACTTAGAACTTGGT 58.488 33.333 0.00 0.00 0.00 3.67
577 592 5.941948 ATTCCGAAACTTAGAACTTGGTG 57.058 39.130 0.00 0.00 0.00 4.17
578 593 4.411256 TCCGAAACTTAGAACTTGGTGT 57.589 40.909 0.00 0.00 0.00 4.16
579 594 4.124238 TCCGAAACTTAGAACTTGGTGTG 58.876 43.478 0.00 0.00 0.00 3.82
580 595 4.124238 CCGAAACTTAGAACTTGGTGTGA 58.876 43.478 0.00 0.00 0.00 3.58
581 596 4.025145 CCGAAACTTAGAACTTGGTGTGAC 60.025 45.833 0.00 0.00 0.00 3.67
582 597 4.317839 CGAAACTTAGAACTTGGTGTGACG 60.318 45.833 0.00 0.00 0.00 4.35
583 598 3.814005 ACTTAGAACTTGGTGTGACGT 57.186 42.857 0.00 0.00 0.00 4.34
584 599 3.714391 ACTTAGAACTTGGTGTGACGTC 58.286 45.455 9.11 9.11 0.00 4.34
585 600 2.806608 TAGAACTTGGTGTGACGTCC 57.193 50.000 14.12 5.06 0.00 4.79
586 601 1.120530 AGAACTTGGTGTGACGTCCT 58.879 50.000 14.12 0.00 0.00 3.85
587 602 1.202533 AGAACTTGGTGTGACGTCCTG 60.203 52.381 14.12 0.00 0.00 3.86
588 603 0.814010 AACTTGGTGTGACGTCCTGC 60.814 55.000 14.12 4.00 0.00 4.85
589 604 1.227527 CTTGGTGTGACGTCCTGCA 60.228 57.895 14.12 6.78 0.00 4.41
590 605 0.813610 CTTGGTGTGACGTCCTGCAA 60.814 55.000 14.12 0.00 0.00 4.08
591 606 0.393132 TTGGTGTGACGTCCTGCAAA 60.393 50.000 14.12 0.00 0.00 3.68
592 607 0.393132 TGGTGTGACGTCCTGCAAAA 60.393 50.000 14.12 0.00 0.00 2.44
593 608 0.951558 GGTGTGACGTCCTGCAAAAT 59.048 50.000 14.12 0.00 0.00 1.82
594 609 1.069227 GGTGTGACGTCCTGCAAAATC 60.069 52.381 14.12 0.00 0.00 2.17
595 610 1.069227 GTGTGACGTCCTGCAAAATCC 60.069 52.381 14.12 0.00 0.00 3.01
596 611 1.234821 GTGACGTCCTGCAAAATCCA 58.765 50.000 14.12 0.00 0.00 3.41
597 612 1.606668 GTGACGTCCTGCAAAATCCAA 59.393 47.619 14.12 0.00 0.00 3.53
598 613 1.606668 TGACGTCCTGCAAAATCCAAC 59.393 47.619 14.12 0.00 0.00 3.77
599 614 0.591170 ACGTCCTGCAAAATCCAACG 59.409 50.000 0.00 0.00 35.00 4.10
600 615 0.871722 CGTCCTGCAAAATCCAACGA 59.128 50.000 0.00 0.00 0.00 3.85
601 616 1.399727 CGTCCTGCAAAATCCAACGAC 60.400 52.381 0.00 0.00 0.00 4.34
602 617 1.880027 GTCCTGCAAAATCCAACGACT 59.120 47.619 0.00 0.00 0.00 4.18
603 618 2.293399 GTCCTGCAAAATCCAACGACTT 59.707 45.455 0.00 0.00 0.00 3.01
604 619 2.955660 TCCTGCAAAATCCAACGACTTT 59.044 40.909 0.00 0.00 0.00 2.66
605 620 3.052036 CCTGCAAAATCCAACGACTTTG 58.948 45.455 0.00 0.00 34.63 2.77
611 626 6.559042 CAAAATCCAACGACTTTGCATATC 57.441 37.500 0.00 0.00 33.34 1.63
612 627 5.895636 AAATCCAACGACTTTGCATATCA 57.104 34.783 0.00 0.00 33.34 2.15
613 628 4.882671 ATCCAACGACTTTGCATATCAC 57.117 40.909 0.00 0.00 33.34 3.06
614 629 2.670905 TCCAACGACTTTGCATATCACG 59.329 45.455 0.00 0.00 33.34 4.35
615 630 2.670905 CCAACGACTTTGCATATCACGA 59.329 45.455 0.00 0.00 33.34 4.35
616 631 3.242091 CCAACGACTTTGCATATCACGAG 60.242 47.826 0.00 0.00 33.34 4.18
617 632 2.540515 ACGACTTTGCATATCACGAGG 58.459 47.619 0.00 0.00 0.00 4.63
618 633 1.258982 CGACTTTGCATATCACGAGGC 59.741 52.381 0.00 0.00 0.00 4.70
619 634 2.279741 GACTTTGCATATCACGAGGCA 58.720 47.619 0.00 0.00 0.00 4.75
620 635 2.677836 GACTTTGCATATCACGAGGCAA 59.322 45.455 0.00 0.00 43.79 4.52
621 636 3.282021 ACTTTGCATATCACGAGGCAAT 58.718 40.909 0.00 0.00 44.70 3.56
622 637 4.450976 ACTTTGCATATCACGAGGCAATA 58.549 39.130 0.00 0.00 44.70 1.90
623 638 4.512944 ACTTTGCATATCACGAGGCAATAG 59.487 41.667 0.00 0.00 44.70 1.73
624 639 4.335400 TTGCATATCACGAGGCAATAGA 57.665 40.909 0.00 0.00 40.94 1.98
625 640 3.917988 TGCATATCACGAGGCAATAGAG 58.082 45.455 0.00 0.00 32.54 2.43
626 641 2.670414 GCATATCACGAGGCAATAGAGC 59.330 50.000 0.00 0.00 0.00 4.09
627 642 2.706555 TATCACGAGGCAATAGAGCG 57.293 50.000 0.00 0.00 34.64 5.03
628 643 0.747255 ATCACGAGGCAATAGAGCGT 59.253 50.000 0.00 0.00 35.33 5.07
629 644 0.100682 TCACGAGGCAATAGAGCGTC 59.899 55.000 0.00 0.00 43.79 5.19
630 645 0.101399 CACGAGGCAATAGAGCGTCT 59.899 55.000 7.00 0.00 44.73 4.18
631 646 0.101399 ACGAGGCAATAGAGCGTCTG 59.899 55.000 7.00 3.88 44.73 3.51
632 647 0.382158 CGAGGCAATAGAGCGTCTGA 59.618 55.000 7.00 0.00 44.73 3.27
633 648 1.202302 CGAGGCAATAGAGCGTCTGAA 60.202 52.381 7.00 0.00 44.73 3.02
634 649 2.197577 GAGGCAATAGAGCGTCTGAAC 58.802 52.381 0.00 0.00 43.85 3.18
635 650 1.550524 AGGCAATAGAGCGTCTGAACA 59.449 47.619 0.00 0.00 34.64 3.18
636 651 1.661112 GGCAATAGAGCGTCTGAACAC 59.339 52.381 0.00 0.00 34.64 3.32
637 652 1.321743 GCAATAGAGCGTCTGAACACG 59.678 52.381 0.00 0.00 42.95 4.49
638 653 2.596452 CAATAGAGCGTCTGAACACGT 58.404 47.619 0.00 0.00 42.04 4.49
639 654 2.264109 ATAGAGCGTCTGAACACGTG 57.736 50.000 15.48 15.48 42.04 4.49
640 655 0.949397 TAGAGCGTCTGAACACGTGT 59.051 50.000 17.22 17.22 42.04 4.49
641 656 0.949397 AGAGCGTCTGAACACGTGTA 59.051 50.000 23.69 6.27 42.04 2.90
642 657 1.069159 AGAGCGTCTGAACACGTGTAG 60.069 52.381 23.69 16.84 42.04 2.74
643 658 0.039437 AGCGTCTGAACACGTGTAGG 60.039 55.000 23.69 12.84 42.04 3.18
644 659 0.318445 GCGTCTGAACACGTGTAGGT 60.318 55.000 23.69 6.30 42.04 3.08
645 660 1.069022 GCGTCTGAACACGTGTAGGTA 60.069 52.381 23.69 5.60 42.04 3.08
646 661 2.847901 CGTCTGAACACGTGTAGGTAG 58.152 52.381 23.69 16.71 34.95 3.18
647 662 2.413765 CGTCTGAACACGTGTAGGTAGG 60.414 54.545 23.69 10.09 34.95 3.18
648 663 2.555757 GTCTGAACACGTGTAGGTAGGT 59.444 50.000 23.69 3.63 0.00 3.08
649 664 2.555325 TCTGAACACGTGTAGGTAGGTG 59.445 50.000 23.69 6.79 41.02 4.00
651 666 2.034939 TGAACACGTGTAGGTAGGTGTG 59.965 50.000 23.69 0.00 45.67 3.82
652 667 1.696063 ACACGTGTAGGTAGGTGTGT 58.304 50.000 21.98 0.00 44.97 3.72
653 668 1.338973 ACACGTGTAGGTAGGTGTGTG 59.661 52.381 21.98 0.00 44.97 3.82
654 669 0.316204 ACGTGTAGGTAGGTGTGTGC 59.684 55.000 0.00 0.00 0.00 4.57
655 670 0.601558 CGTGTAGGTAGGTGTGTGCT 59.398 55.000 0.00 0.00 0.00 4.40
656 671 1.402456 CGTGTAGGTAGGTGTGTGCTC 60.402 57.143 0.00 0.00 0.00 4.26
657 672 0.885879 TGTAGGTAGGTGTGTGCTCG 59.114 55.000 0.00 0.00 0.00 5.03
658 673 0.886563 GTAGGTAGGTGTGTGCTCGT 59.113 55.000 0.00 0.00 0.00 4.18
659 674 0.885879 TAGGTAGGTGTGTGCTCGTG 59.114 55.000 0.00 0.00 0.00 4.35
660 675 2.027625 GGTAGGTGTGTGCTCGTGC 61.028 63.158 1.71 1.71 40.20 5.34
661 676 2.049526 TAGGTGTGTGCTCGTGCG 60.050 61.111 4.84 0.00 43.34 5.34
662 677 2.557372 TAGGTGTGTGCTCGTGCGA 61.557 57.895 4.84 0.00 43.34 5.10
663 678 2.472232 TAGGTGTGTGCTCGTGCGAG 62.472 60.000 16.29 16.29 44.56 5.03
664 679 2.658593 GTGTGTGCTCGTGCGAGT 60.659 61.111 20.55 0.00 43.70 4.18
665 680 2.106131 TGTGTGCTCGTGCGAGTT 59.894 55.556 20.55 0.00 43.70 3.01
666 681 1.520564 TGTGTGCTCGTGCGAGTTT 60.521 52.632 20.55 0.00 43.70 2.66
667 682 1.087202 TGTGTGCTCGTGCGAGTTTT 61.087 50.000 20.55 0.00 43.70 2.43
668 683 0.383124 GTGTGCTCGTGCGAGTTTTC 60.383 55.000 20.55 6.71 43.70 2.29
669 684 0.808060 TGTGCTCGTGCGAGTTTTCA 60.808 50.000 20.55 9.00 43.70 2.69
670 685 0.111089 GTGCTCGTGCGAGTTTTCAG 60.111 55.000 20.55 0.00 43.70 3.02
671 686 1.221466 TGCTCGTGCGAGTTTTCAGG 61.221 55.000 20.55 0.00 43.70 3.86
672 687 1.493311 CTCGTGCGAGTTTTCAGGC 59.507 57.895 12.87 0.00 37.47 4.85
673 688 1.901650 CTCGTGCGAGTTTTCAGGCC 61.902 60.000 12.87 0.00 37.47 5.19
674 689 1.961277 CGTGCGAGTTTTCAGGCCT 60.961 57.895 0.00 0.00 0.00 5.19
675 690 1.507141 CGTGCGAGTTTTCAGGCCTT 61.507 55.000 0.00 0.00 0.00 4.35
676 691 0.040067 GTGCGAGTTTTCAGGCCTTG 60.040 55.000 0.00 0.00 0.00 3.61
677 692 0.465460 TGCGAGTTTTCAGGCCTTGT 60.465 50.000 0.00 0.00 0.00 3.16
678 693 0.238553 GCGAGTTTTCAGGCCTTGTC 59.761 55.000 0.00 0.00 0.00 3.18
679 694 0.512952 CGAGTTTTCAGGCCTTGTCG 59.487 55.000 0.00 1.28 0.00 4.35
680 695 0.238553 GAGTTTTCAGGCCTTGTCGC 59.761 55.000 0.00 0.00 0.00 5.19
687 702 2.124736 GGCCTTGTCGCCTATGCA 60.125 61.111 0.00 0.00 46.10 3.96
688 703 1.526917 GGCCTTGTCGCCTATGCAT 60.527 57.895 3.79 3.79 46.10 3.96
689 704 0.250295 GGCCTTGTCGCCTATGCATA 60.250 55.000 6.20 6.20 46.10 3.14
690 705 1.593196 GCCTTGTCGCCTATGCATAA 58.407 50.000 8.00 0.00 37.32 1.90
691 706 1.532868 GCCTTGTCGCCTATGCATAAG 59.467 52.381 8.00 2.60 37.32 1.73
692 707 1.532868 CCTTGTCGCCTATGCATAAGC 59.467 52.381 16.01 16.01 42.57 3.09
693 708 2.487934 CTTGTCGCCTATGCATAAGCT 58.512 47.619 21.82 0.00 42.74 3.74
694 709 1.869774 TGTCGCCTATGCATAAGCTG 58.130 50.000 21.82 15.90 42.74 4.24
695 710 1.412343 TGTCGCCTATGCATAAGCTGA 59.588 47.619 21.82 17.54 42.74 4.26
696 711 2.037641 TGTCGCCTATGCATAAGCTGAT 59.962 45.455 21.82 0.00 42.74 2.90
697 712 3.070018 GTCGCCTATGCATAAGCTGATT 58.930 45.455 21.82 0.00 42.74 2.57
698 713 3.499918 GTCGCCTATGCATAAGCTGATTT 59.500 43.478 21.82 0.00 42.74 2.17
699 714 4.690748 GTCGCCTATGCATAAGCTGATTTA 59.309 41.667 21.82 1.80 42.74 1.40
700 715 4.931601 TCGCCTATGCATAAGCTGATTTAG 59.068 41.667 21.82 7.53 42.74 1.85
701 716 4.692625 CGCCTATGCATAAGCTGATTTAGT 59.307 41.667 21.82 0.00 42.74 2.24
702 717 5.390251 CGCCTATGCATAAGCTGATTTAGTG 60.390 44.000 21.82 2.95 42.74 2.74
703 718 5.702670 GCCTATGCATAAGCTGATTTAGTGA 59.297 40.000 18.23 0.00 42.74 3.41
704 719 6.373774 GCCTATGCATAAGCTGATTTAGTGAT 59.626 38.462 18.23 0.00 42.74 3.06
705 720 7.094463 GCCTATGCATAAGCTGATTTAGTGATT 60.094 37.037 18.23 0.00 42.74 2.57
706 721 8.235226 CCTATGCATAAGCTGATTTAGTGATTG 58.765 37.037 8.00 0.00 42.74 2.67
707 722 6.381481 TGCATAAGCTGATTTAGTGATTGG 57.619 37.500 0.00 0.00 42.74 3.16
708 723 6.121590 TGCATAAGCTGATTTAGTGATTGGA 58.878 36.000 0.00 0.00 42.74 3.53
709 724 6.038603 TGCATAAGCTGATTTAGTGATTGGAC 59.961 38.462 0.00 0.00 42.74 4.02
710 725 6.038603 GCATAAGCTGATTTAGTGATTGGACA 59.961 38.462 0.00 0.00 37.91 4.02
711 726 7.255381 GCATAAGCTGATTTAGTGATTGGACAT 60.255 37.037 0.00 0.00 37.91 3.06
712 727 8.627403 CATAAGCTGATTTAGTGATTGGACATT 58.373 33.333 0.00 0.00 0.00 2.71
713 728 6.690194 AGCTGATTTAGTGATTGGACATTC 57.310 37.500 0.00 0.00 0.00 2.67
714 729 6.421485 AGCTGATTTAGTGATTGGACATTCT 58.579 36.000 0.00 0.00 0.00 2.40
715 730 6.318144 AGCTGATTTAGTGATTGGACATTCTG 59.682 38.462 0.00 0.00 0.00 3.02
716 731 6.094603 GCTGATTTAGTGATTGGACATTCTGT 59.905 38.462 0.00 0.00 0.00 3.41
717 732 7.362401 GCTGATTTAGTGATTGGACATTCTGTT 60.362 37.037 0.00 0.00 0.00 3.16
718 733 8.044060 TGATTTAGTGATTGGACATTCTGTTC 57.956 34.615 0.00 0.00 0.00 3.18
719 734 7.665145 TGATTTAGTGATTGGACATTCTGTTCA 59.335 33.333 0.00 0.00 33.18 3.18
720 735 6.801539 TTAGTGATTGGACATTCTGTTCAC 57.198 37.500 0.00 0.00 35.17 3.18
721 736 4.717877 AGTGATTGGACATTCTGTTCACA 58.282 39.130 10.66 0.00 35.17 3.58
722 737 5.132502 AGTGATTGGACATTCTGTTCACAA 58.867 37.500 10.66 4.80 35.17 3.33
723 738 5.771666 AGTGATTGGACATTCTGTTCACAAT 59.228 36.000 10.66 8.24 35.17 2.71
724 739 6.266103 AGTGATTGGACATTCTGTTCACAATT 59.734 34.615 10.66 0.00 35.17 2.32
725 740 7.448161 AGTGATTGGACATTCTGTTCACAATTA 59.552 33.333 10.66 4.31 35.17 1.40
726 741 8.081633 GTGATTGGACATTCTGTTCACAATTAA 58.918 33.333 5.41 0.00 35.17 1.40
727 742 8.805175 TGATTGGACATTCTGTTCACAATTAAT 58.195 29.630 0.00 0.00 35.17 1.40
730 745 9.513906 TTGGACATTCTGTTCACAATTAATAGA 57.486 29.630 0.00 0.00 35.17 1.98
731 746 9.513906 TGGACATTCTGTTCACAATTAATAGAA 57.486 29.630 2.35 2.35 38.10 2.10
777 792 5.859205 AAAATAGGCATTGGACATTCCTC 57.141 39.130 0.00 0.00 37.46 3.71
778 793 2.620251 TAGGCATTGGACATTCCTCG 57.380 50.000 0.00 0.00 37.46 4.63
779 794 0.107017 AGGCATTGGACATTCCTCGG 60.107 55.000 0.00 0.00 37.46 4.63
780 795 0.394352 GGCATTGGACATTCCTCGGT 60.394 55.000 0.00 0.00 37.46 4.69
781 796 1.017387 GCATTGGACATTCCTCGGTC 58.983 55.000 0.00 0.00 37.46 4.79
782 797 1.290203 CATTGGACATTCCTCGGTCG 58.710 55.000 0.00 0.00 37.46 4.79
783 798 1.134818 CATTGGACATTCCTCGGTCGA 60.135 52.381 0.00 0.00 37.46 4.20
784 799 1.191535 TTGGACATTCCTCGGTCGAT 58.808 50.000 0.00 0.00 37.46 3.59
785 800 0.744874 TGGACATTCCTCGGTCGATC 59.255 55.000 0.00 0.00 37.46 3.69
786 801 0.032267 GGACATTCCTCGGTCGATCC 59.968 60.000 0.00 0.00 34.87 3.36
787 802 0.744874 GACATTCCTCGGTCGATCCA 59.255 55.000 0.00 0.00 35.57 3.41
788 803 0.460311 ACATTCCTCGGTCGATCCAC 59.540 55.000 0.00 0.00 35.57 4.02
789 804 0.459899 CATTCCTCGGTCGATCCACA 59.540 55.000 0.00 0.00 35.57 4.17
790 805 1.134818 CATTCCTCGGTCGATCCACAA 60.135 52.381 0.00 0.00 35.57 3.33
791 806 0.970640 TTCCTCGGTCGATCCACAAA 59.029 50.000 0.00 0.00 35.57 2.83
792 807 1.191535 TCCTCGGTCGATCCACAAAT 58.808 50.000 0.00 0.00 35.57 2.32
793 808 1.553248 TCCTCGGTCGATCCACAAATT 59.447 47.619 0.00 0.00 35.57 1.82
794 809 1.933853 CCTCGGTCGATCCACAAATTC 59.066 52.381 0.00 0.00 35.57 2.17
795 810 1.588404 CTCGGTCGATCCACAAATTCG 59.412 52.381 0.00 0.00 35.57 3.34
796 811 1.202817 TCGGTCGATCCACAAATTCGA 59.797 47.619 0.00 0.00 39.38 3.71
797 812 1.588404 CGGTCGATCCACAAATTCGAG 59.412 52.381 0.00 0.00 42.01 4.04
798 813 2.618053 GGTCGATCCACAAATTCGAGT 58.382 47.619 0.00 0.00 42.01 4.18
799 814 2.348666 GGTCGATCCACAAATTCGAGTG 59.651 50.000 0.00 0.00 42.01 3.51
800 815 1.999735 TCGATCCACAAATTCGAGTGC 59.000 47.619 0.00 0.00 37.01 4.40
801 816 1.062587 CGATCCACAAATTCGAGTGCC 59.937 52.381 0.00 0.00 34.92 5.01
802 817 2.083774 GATCCACAAATTCGAGTGCCA 58.916 47.619 0.00 0.00 34.48 4.92
803 818 1.974265 TCCACAAATTCGAGTGCCAA 58.026 45.000 0.00 0.00 34.48 4.52
804 819 2.513753 TCCACAAATTCGAGTGCCAAT 58.486 42.857 0.00 0.00 34.48 3.16
805 820 2.890311 TCCACAAATTCGAGTGCCAATT 59.110 40.909 0.00 0.00 34.48 2.32
806 821 3.057596 TCCACAAATTCGAGTGCCAATTC 60.058 43.478 0.00 0.00 34.48 2.17
807 822 3.244976 CACAAATTCGAGTGCCAATTCC 58.755 45.455 0.00 0.00 0.00 3.01
808 823 2.095263 ACAAATTCGAGTGCCAATTCCG 60.095 45.455 0.00 0.00 0.00 4.30
809 824 1.821216 AATTCGAGTGCCAATTCCGT 58.179 45.000 0.00 0.00 0.00 4.69
810 825 1.369625 ATTCGAGTGCCAATTCCGTC 58.630 50.000 0.00 0.00 0.00 4.79
811 826 0.320374 TTCGAGTGCCAATTCCGTCT 59.680 50.000 0.00 0.00 0.00 4.18
812 827 0.389817 TCGAGTGCCAATTCCGTCTG 60.390 55.000 0.00 0.00 0.00 3.51
813 828 1.796796 GAGTGCCAATTCCGTCTGC 59.203 57.895 0.00 0.00 0.00 4.26
814 829 1.970917 GAGTGCCAATTCCGTCTGCG 61.971 60.000 0.00 0.00 37.95 5.18
815 830 2.031919 TGCCAATTCCGTCTGCGT 59.968 55.556 0.00 0.00 36.15 5.24
816 831 2.032634 TGCCAATTCCGTCTGCGTC 61.033 57.895 0.00 0.00 36.15 5.19
817 832 2.750888 GCCAATTCCGTCTGCGTCC 61.751 63.158 0.00 0.00 36.15 4.79
818 833 1.079127 CCAATTCCGTCTGCGTCCT 60.079 57.895 0.00 0.00 36.15 3.85
819 834 0.673644 CCAATTCCGTCTGCGTCCTT 60.674 55.000 0.00 0.00 36.15 3.36
820 835 1.156736 CAATTCCGTCTGCGTCCTTT 58.843 50.000 0.00 0.00 36.15 3.11
821 836 2.343101 CAATTCCGTCTGCGTCCTTTA 58.657 47.619 0.00 0.00 36.15 1.85
822 837 2.936498 CAATTCCGTCTGCGTCCTTTAT 59.064 45.455 0.00 0.00 36.15 1.40
823 838 2.288961 TTCCGTCTGCGTCCTTTATC 57.711 50.000 0.00 0.00 36.15 1.75
824 839 0.458669 TCCGTCTGCGTCCTTTATCC 59.541 55.000 0.00 0.00 36.15 2.59
825 840 0.174845 CCGTCTGCGTCCTTTATCCA 59.825 55.000 0.00 0.00 36.15 3.41
826 841 1.278238 CGTCTGCGTCCTTTATCCAC 58.722 55.000 0.00 0.00 0.00 4.02
827 842 1.278238 GTCTGCGTCCTTTATCCACG 58.722 55.000 0.00 0.00 36.60 4.94
828 843 0.892755 TCTGCGTCCTTTATCCACGT 59.107 50.000 0.00 0.00 35.91 4.49
829 844 0.999406 CTGCGTCCTTTATCCACGTG 59.001 55.000 9.08 9.08 35.91 4.49
830 845 0.319083 TGCGTCCTTTATCCACGTGT 59.681 50.000 15.65 0.00 35.91 4.49
831 846 1.270412 TGCGTCCTTTATCCACGTGTT 60.270 47.619 15.65 4.05 35.91 3.32
832 847 1.127951 GCGTCCTTTATCCACGTGTTG 59.872 52.381 15.65 0.00 35.91 3.33
833 848 2.409975 CGTCCTTTATCCACGTGTTGT 58.590 47.619 15.65 2.25 0.00 3.32
834 849 2.803956 CGTCCTTTATCCACGTGTTGTT 59.196 45.455 15.65 0.00 0.00 2.83
835 850 3.249080 CGTCCTTTATCCACGTGTTGTTT 59.751 43.478 15.65 0.00 0.00 2.83
836 851 4.448395 CGTCCTTTATCCACGTGTTGTTTA 59.552 41.667 15.65 0.00 0.00 2.01
837 852 5.613142 CGTCCTTTATCCACGTGTTGTTTAC 60.613 44.000 15.65 2.33 0.00 2.01
838 853 5.467735 GTCCTTTATCCACGTGTTGTTTACT 59.532 40.000 15.65 0.00 0.00 2.24
839 854 5.697633 TCCTTTATCCACGTGTTGTTTACTC 59.302 40.000 15.65 0.00 0.00 2.59
840 855 5.699458 CCTTTATCCACGTGTTGTTTACTCT 59.301 40.000 15.65 0.00 0.00 3.24
841 856 6.204108 CCTTTATCCACGTGTTGTTTACTCTT 59.796 38.462 15.65 0.00 0.00 2.85
842 857 7.255001 CCTTTATCCACGTGTTGTTTACTCTTT 60.255 37.037 15.65 0.00 0.00 2.52
843 858 4.868450 TCCACGTGTTGTTTACTCTTTG 57.132 40.909 15.65 0.00 0.00 2.77
844 859 3.064271 TCCACGTGTTGTTTACTCTTTGC 59.936 43.478 15.65 0.00 0.00 3.68
845 860 3.181505 CCACGTGTTGTTTACTCTTTGCA 60.182 43.478 15.65 0.00 0.00 4.08
846 861 3.783943 CACGTGTTGTTTACTCTTTGCAC 59.216 43.478 7.58 0.00 0.00 4.57
847 862 3.687698 ACGTGTTGTTTACTCTTTGCACT 59.312 39.130 0.00 0.00 0.00 4.40
848 863 4.028383 CGTGTTGTTTACTCTTTGCACTG 58.972 43.478 0.00 0.00 0.00 3.66
849 864 3.791353 GTGTTGTTTACTCTTTGCACTGC 59.209 43.478 0.00 0.00 0.00 4.40
850 865 3.035942 GTTGTTTACTCTTTGCACTGCG 58.964 45.455 0.00 0.00 0.00 5.18
869 884 2.972144 GCACGCCGGCACAACAATA 61.972 57.895 28.98 0.00 0.00 1.90
910 925 1.884464 CCATGTCACGGGATCGCAG 60.884 63.158 10.70 5.44 40.63 5.18
990 1007 2.574006 TCTGCACTTTCAGAGGCATT 57.426 45.000 0.00 0.00 38.11 3.56
991 1008 2.156917 TCTGCACTTTCAGAGGCATTG 58.843 47.619 0.00 0.00 38.11 2.82
1008 1025 0.098552 TTGACGCGCTTATGCCAATG 59.901 50.000 5.73 0.00 35.36 2.82
1009 1026 1.655350 GACGCGCTTATGCCAATGC 60.655 57.895 5.73 0.00 35.36 3.56
1016 1033 0.103572 CTTATGCCAATGCCTGCACC 59.896 55.000 0.00 0.00 40.88 5.01
1018 1035 0.397394 TATGCCAATGCCTGCACCAT 60.397 50.000 0.00 0.00 40.88 3.55
1148 1168 0.813210 GATGCTGCCCCGAAGAAGAG 60.813 60.000 0.00 0.00 0.00 2.85
1150 1170 2.665000 CTGCCCCGAAGAAGAGCA 59.335 61.111 0.00 0.00 0.00 4.26
1221 1241 5.104527 TCCAACTGTCCTTTTTCTCTGAGAA 60.105 40.000 15.82 15.82 31.28 2.87
1228 1248 5.049129 GTCCTTTTTCTCTGAGAACATGTGG 60.049 44.000 19.17 15.59 33.26 4.17
1234 1254 3.119352 TCTCTGAGAACATGTGGTCGATG 60.119 47.826 4.57 0.00 36.72 3.84
1265 1285 6.360370 TCAGTAATATCTACCCTTGATGCC 57.640 41.667 0.00 0.00 0.00 4.40
1275 1295 1.876156 CCCTTGATGCCTTCTTATCGC 59.124 52.381 0.00 0.00 0.00 4.58
1592 1622 3.073062 AGAGTGAGTTTGTTATGGGTGCT 59.927 43.478 0.00 0.00 0.00 4.40
1705 1790 0.385974 ATCGTTTTGCTGCGTGCTTC 60.386 50.000 0.00 0.00 43.37 3.86
1800 2030 3.791245 TCACCAAGCAAAAATTTCGCTT 58.209 36.364 17.62 17.62 46.57 4.68
1820 2050 4.557496 GCTTTGGAACTTGATCTTCACCAC 60.557 45.833 0.00 0.00 0.00 4.16
1845 2075 0.806241 TTTGCCGGCTAATTTCCGTC 59.194 50.000 29.70 5.72 45.09 4.79
1849 2079 1.287425 CCGGCTAATTTCCGTCAGAC 58.713 55.000 14.93 0.00 45.09 3.51
1905 2138 7.902920 AAAATGGTATACATGCCAGATCTTT 57.097 32.000 5.01 0.00 45.73 2.52
1906 2139 7.516198 AAATGGTATACATGCCAGATCTTTC 57.484 36.000 5.01 0.00 45.73 2.62
1912 2145 3.618351 ACATGCCAGATCTTTCTTGGAG 58.382 45.455 2.22 0.00 0.00 3.86
1946 2200 8.759481 TTCAAAATACATGGCATTCCTATACA 57.241 30.769 0.00 0.00 0.00 2.29
1956 2210 9.683069 CATGGCATTCCTATACAAAAATTACTC 57.317 33.333 0.00 0.00 0.00 2.59
1997 2277 8.334263 TCAAATAAACTTGTGTGCATCATCTA 57.666 30.769 0.00 0.00 0.00 1.98
1998 2278 8.453320 TCAAATAAACTTGTGTGCATCATCTAG 58.547 33.333 0.00 0.00 0.00 2.43
1999 2279 7.928307 AATAAACTTGTGTGCATCATCTAGT 57.072 32.000 0.00 0.00 0.00 2.57
2018 2298 6.959904 TCTAGTACATCAGAACAGAGGTAGT 58.040 40.000 0.00 0.00 40.39 2.73
2024 2304 2.747989 TCAGAACAGAGGTAGTGCGTAG 59.252 50.000 0.00 0.00 0.00 3.51
2029 2309 1.604755 CAGAGGTAGTGCGTAGGCTAG 59.395 57.143 9.11 0.00 40.82 3.42
2048 2328 4.081917 GCTAGCTCCTAGATACAATGGACC 60.082 50.000 7.70 0.00 36.26 4.46
2065 2345 4.993028 TGGACCTGCCAGTAATAAACTTT 58.007 39.130 0.00 0.00 43.33 2.66
2077 2357 3.575965 ATAAACTTTGGGCGCTTCTTG 57.424 42.857 7.64 0.00 0.00 3.02
2139 2419 1.013596 TTGTCACCGCAACTTGTCAG 58.986 50.000 0.00 0.00 0.00 3.51
2270 2553 4.949238 CACCATCCTTGATTTGTATGGTCA 59.051 41.667 2.39 0.00 45.57 4.02
2326 2609 3.260884 TGAGCTTCGGAAATGTACCTTCT 59.739 43.478 0.00 0.00 0.00 2.85
2437 2720 4.217118 ACCTGCTTCAATTGTGTCTGAATC 59.783 41.667 5.13 0.00 31.40 2.52
2550 2833 2.163211 GTGGCATTTCCTCTGCTTTCTC 59.837 50.000 0.00 0.00 39.60 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.163884 GCCGAGTATTTAAACTCAAGGACAC 60.164 44.000 7.82 0.00 45.13 3.67
1 2 4.933400 GCCGAGTATTTAAACTCAAGGACA 59.067 41.667 7.82 0.00 45.13 4.02
2 3 4.331992 GGCCGAGTATTTAAACTCAAGGAC 59.668 45.833 7.82 1.09 45.13 3.85
3 4 4.020039 TGGCCGAGTATTTAAACTCAAGGA 60.020 41.667 0.00 0.00 45.13 3.36
4 5 4.094442 GTGGCCGAGTATTTAAACTCAAGG 59.906 45.833 0.00 3.48 45.13 3.61
5 6 4.935808 AGTGGCCGAGTATTTAAACTCAAG 59.064 41.667 0.00 0.72 45.13 3.02
6 7 4.901868 AGTGGCCGAGTATTTAAACTCAA 58.098 39.130 0.00 0.00 45.13 3.02
7 8 4.501071 GAGTGGCCGAGTATTTAAACTCA 58.499 43.478 0.00 0.00 45.13 3.41
8 9 3.869832 GGAGTGGCCGAGTATTTAAACTC 59.130 47.826 0.00 0.68 42.09 3.01
9 10 3.262405 TGGAGTGGCCGAGTATTTAAACT 59.738 43.478 0.00 0.00 40.66 2.66
20 21 2.525629 TCTGGTTGGAGTGGCCGA 60.526 61.111 0.00 0.00 40.66 5.54
21 22 2.358737 GTCTGGTTGGAGTGGCCG 60.359 66.667 0.00 0.00 40.66 6.13
22 23 1.823169 TACGTCTGGTTGGAGTGGCC 61.823 60.000 0.00 0.00 37.10 5.36
26 27 2.037144 AGTTGTACGTCTGGTTGGAGT 58.963 47.619 0.00 0.00 0.00 3.85
67 68 5.875224 TGGTGAAGACAATGATTTGGTAGA 58.125 37.500 0.00 0.00 37.15 2.59
79 80 3.278574 CCAGTTGACTTGGTGAAGACAA 58.721 45.455 0.00 0.00 40.19 3.18
88 89 5.316987 AGGAAATAGAACCAGTTGACTTGG 58.683 41.667 0.00 0.00 0.00 3.61
90 91 6.187727 TGAGGAAATAGAACCAGTTGACTT 57.812 37.500 0.00 0.00 0.00 3.01
93 94 6.043243 AGAGTTGAGGAAATAGAACCAGTTGA 59.957 38.462 0.00 0.00 0.00 3.18
94 95 6.234177 AGAGTTGAGGAAATAGAACCAGTTG 58.766 40.000 0.00 0.00 0.00 3.16
95 96 6.441088 AGAGTTGAGGAAATAGAACCAGTT 57.559 37.500 0.00 0.00 0.00 3.16
99 100 7.929941 ATGAAAGAGTTGAGGAAATAGAACC 57.070 36.000 0.00 0.00 0.00 3.62
116 117 5.063204 ACACATGAACGAGGAAATGAAAGA 58.937 37.500 0.00 0.00 0.00 2.52
120 121 2.993220 CGACACATGAACGAGGAAATGA 59.007 45.455 0.00 0.00 0.00 2.57
136 137 5.233050 CAGTAATGATCAGGTTCATCGACAC 59.767 44.000 0.09 0.00 35.29 3.67
138 139 5.352284 ACAGTAATGATCAGGTTCATCGAC 58.648 41.667 0.09 0.00 35.29 4.20
139 140 5.598416 ACAGTAATGATCAGGTTCATCGA 57.402 39.130 0.09 0.00 35.29 3.59
140 141 6.313658 TCAAACAGTAATGATCAGGTTCATCG 59.686 38.462 0.09 0.00 35.29 3.84
142 143 7.884877 TCTTCAAACAGTAATGATCAGGTTCAT 59.115 33.333 0.09 0.00 37.96 2.57
145 146 7.227156 AGTCTTCAAACAGTAATGATCAGGTT 58.773 34.615 0.09 0.00 0.00 3.50
148 149 8.777413 TCAAAGTCTTCAAACAGTAATGATCAG 58.223 33.333 0.09 0.00 0.00 2.90
177 178 9.759473 TGGATTGAGGAAATAGAGAAAATCTTT 57.241 29.630 0.00 0.00 39.64 2.52
189 190 8.884124 ACTGAAGAAATTGGATTGAGGAAATA 57.116 30.769 0.00 0.00 0.00 1.40
199 200 7.628234 AGACTATGTGACTGAAGAAATTGGAT 58.372 34.615 0.00 0.00 0.00 3.41
205 206 5.928839 GCTGAAGACTATGTGACTGAAGAAA 59.071 40.000 0.00 0.00 0.00 2.52
218 219 5.426833 ACAGGATAAACAGGCTGAAGACTAT 59.573 40.000 23.66 9.50 0.00 2.12
220 221 3.584848 ACAGGATAAACAGGCTGAAGACT 59.415 43.478 23.66 8.32 0.00 3.24
243 244 6.149129 ACGCAGAGTACAGATATCATGAAA 57.851 37.500 5.32 0.00 0.00 2.69
246 247 5.750547 ACAAACGCAGAGTACAGATATCATG 59.249 40.000 5.32 3.30 0.00 3.07
248 249 5.324784 ACAAACGCAGAGTACAGATATCA 57.675 39.130 5.32 0.00 0.00 2.15
250 251 6.649141 TGAAAACAAACGCAGAGTACAGATAT 59.351 34.615 0.00 0.00 0.00 1.63
253 254 4.185394 TGAAAACAAACGCAGAGTACAGA 58.815 39.130 0.00 0.00 0.00 3.41
254 255 4.530094 TGAAAACAAACGCAGAGTACAG 57.470 40.909 0.00 0.00 0.00 2.74
261 262 5.886715 TGATGAAATGAAAACAAACGCAG 57.113 34.783 0.00 0.00 0.00 5.18
264 265 8.230112 TCATCATGATGAAATGAAAACAAACG 57.770 30.769 31.46 3.91 44.14 3.60
292 293 6.764308 ATAAGCATAACAGAGCAACAACAT 57.236 33.333 0.00 0.00 0.00 2.71
295 296 6.414732 AGGTATAAGCATAACAGAGCAACAA 58.585 36.000 0.00 0.00 0.00 2.83
297 298 8.608844 ATTAGGTATAAGCATAACAGAGCAAC 57.391 34.615 0.00 0.00 0.00 4.17
300 301 9.930693 AGTAATTAGGTATAAGCATAACAGAGC 57.069 33.333 0.00 0.00 0.00 4.09
315 316 9.754382 CTAAGCAACGGAATAAGTAATTAGGTA 57.246 33.333 0.00 0.00 0.00 3.08
317 318 7.929785 TCCTAAGCAACGGAATAAGTAATTAGG 59.070 37.037 0.00 0.00 37.80 2.69
320 321 8.747538 ATTCCTAAGCAACGGAATAAGTAATT 57.252 30.769 10.53 0.00 45.61 1.40
322 323 8.570068 AAATTCCTAAGCAACGGAATAAGTAA 57.430 30.769 12.07 0.00 46.47 2.24
334 335 7.016153 TCTAGGTGAAGAAATTCCTAAGCAA 57.984 36.000 0.00 0.00 33.03 3.91
336 337 9.785982 AATATCTAGGTGAAGAAATTCCTAAGC 57.214 33.333 0.00 0.00 33.03 3.09
349 364 5.299531 CGTCACTGAGGAATATCTAGGTGAA 59.700 44.000 0.00 0.00 33.55 3.18
356 371 6.644347 ACAAATTCGTCACTGAGGAATATCT 58.356 36.000 21.61 8.65 43.38 1.98
359 374 8.610248 TTTTACAAATTCGTCACTGAGGAATA 57.390 30.769 21.61 8.37 43.38 1.75
435 450 2.815503 TGTCGTCCAGAAATCAGTCGTA 59.184 45.455 0.00 0.00 0.00 3.43
437 452 1.986378 GTGTCGTCCAGAAATCAGTCG 59.014 52.381 0.00 0.00 0.00 4.18
438 453 1.986378 CGTGTCGTCCAGAAATCAGTC 59.014 52.381 0.00 0.00 0.00 3.51
439 454 1.611977 TCGTGTCGTCCAGAAATCAGT 59.388 47.619 0.00 0.00 0.00 3.41
440 455 2.347697 TCGTGTCGTCCAGAAATCAG 57.652 50.000 0.00 0.00 0.00 2.90
441 456 2.804697 TTCGTGTCGTCCAGAAATCA 57.195 45.000 0.00 0.00 0.00 2.57
442 457 4.394795 CAATTTCGTGTCGTCCAGAAATC 58.605 43.478 10.78 0.00 40.95 2.17
443 458 3.364964 GCAATTTCGTGTCGTCCAGAAAT 60.365 43.478 6.61 6.61 42.85 2.17
444 459 2.032377 GCAATTTCGTGTCGTCCAGAAA 60.032 45.455 3.23 3.23 37.07 2.52
446 461 1.144969 GCAATTTCGTGTCGTCCAGA 58.855 50.000 0.00 0.00 0.00 3.86
447 462 0.865111 TGCAATTTCGTGTCGTCCAG 59.135 50.000 0.00 0.00 0.00 3.86
449 464 0.452784 GCTGCAATTTCGTGTCGTCC 60.453 55.000 0.00 0.00 0.00 4.79
450 465 0.452784 GGCTGCAATTTCGTGTCGTC 60.453 55.000 0.50 0.00 0.00 4.20
451 466 1.163420 TGGCTGCAATTTCGTGTCGT 61.163 50.000 0.50 0.00 0.00 4.34
452 467 0.168788 ATGGCTGCAATTTCGTGTCG 59.831 50.000 0.50 0.00 0.00 4.35
453 468 3.698029 ATATGGCTGCAATTTCGTGTC 57.302 42.857 0.50 0.00 0.00 3.67
454 469 3.315191 GGTATATGGCTGCAATTTCGTGT 59.685 43.478 0.50 0.00 0.00 4.49
455 470 3.304659 GGGTATATGGCTGCAATTTCGTG 60.305 47.826 0.50 0.00 0.00 4.35
456 471 2.884639 GGGTATATGGCTGCAATTTCGT 59.115 45.455 0.50 0.00 0.00 3.85
457 472 2.095768 CGGGTATATGGCTGCAATTTCG 60.096 50.000 0.50 0.00 0.00 3.46
458 473 2.884639 ACGGGTATATGGCTGCAATTTC 59.115 45.455 0.50 0.00 0.00 2.17
459 474 2.622942 CACGGGTATATGGCTGCAATTT 59.377 45.455 0.50 0.00 0.00 1.82
460 475 2.229792 CACGGGTATATGGCTGCAATT 58.770 47.619 0.50 0.00 0.00 2.32
461 476 1.142870 ACACGGGTATATGGCTGCAAT 59.857 47.619 0.50 0.00 0.00 3.56
462 477 0.544223 ACACGGGTATATGGCTGCAA 59.456 50.000 0.50 0.00 0.00 4.08
463 478 0.544223 AACACGGGTATATGGCTGCA 59.456 50.000 0.50 0.00 0.00 4.41
464 479 0.944386 CAACACGGGTATATGGCTGC 59.056 55.000 0.00 0.00 0.00 5.25
465 480 2.325583 ACAACACGGGTATATGGCTG 57.674 50.000 0.00 0.00 0.00 4.85
466 481 2.237643 TCAACAACACGGGTATATGGCT 59.762 45.455 0.00 0.00 0.00 4.75
467 482 2.612212 CTCAACAACACGGGTATATGGC 59.388 50.000 0.00 0.00 0.00 4.40
468 483 3.621268 CACTCAACAACACGGGTATATGG 59.379 47.826 0.00 0.00 0.00 2.74
469 484 3.621268 CCACTCAACAACACGGGTATATG 59.379 47.826 0.00 0.00 0.00 1.78
470 485 3.370103 CCCACTCAACAACACGGGTATAT 60.370 47.826 0.00 0.00 0.00 0.86
471 486 2.027929 CCCACTCAACAACACGGGTATA 60.028 50.000 0.00 0.00 0.00 1.47
472 487 1.271163 CCCACTCAACAACACGGGTAT 60.271 52.381 0.00 0.00 0.00 2.73
473 488 0.107081 CCCACTCAACAACACGGGTA 59.893 55.000 0.00 0.00 0.00 3.69
474 489 1.153046 CCCACTCAACAACACGGGT 60.153 57.895 0.00 0.00 0.00 5.28
475 490 2.551912 GCCCACTCAACAACACGGG 61.552 63.158 0.00 0.00 36.71 5.28
476 491 0.250124 TAGCCCACTCAACAACACGG 60.250 55.000 0.00 0.00 0.00 4.94
477 492 0.865769 GTAGCCCACTCAACAACACG 59.134 55.000 0.00 0.00 0.00 4.49
478 493 1.961793 TGTAGCCCACTCAACAACAC 58.038 50.000 0.00 0.00 0.00 3.32
479 494 2.294074 GTTGTAGCCCACTCAACAACA 58.706 47.619 11.22 0.00 46.87 3.33
480 495 1.607148 GGTTGTAGCCCACTCAACAAC 59.393 52.381 8.32 8.32 46.91 3.32
481 496 1.812324 CGGTTGTAGCCCACTCAACAA 60.812 52.381 8.98 0.00 41.87 2.83
482 497 0.250124 CGGTTGTAGCCCACTCAACA 60.250 55.000 8.98 0.00 41.87 3.33
483 498 1.574702 GCGGTTGTAGCCCACTCAAC 61.575 60.000 0.00 0.00 40.13 3.18
484 499 1.302192 GCGGTTGTAGCCCACTCAA 60.302 57.895 0.00 0.00 0.00 3.02
485 500 2.214216 AGCGGTTGTAGCCCACTCA 61.214 57.895 0.00 0.00 34.64 3.41
486 501 1.741770 CAGCGGTTGTAGCCCACTC 60.742 63.158 0.00 0.00 34.64 3.51
487 502 1.553690 ATCAGCGGTTGTAGCCCACT 61.554 55.000 0.00 0.00 34.64 4.00
488 503 1.078426 ATCAGCGGTTGTAGCCCAC 60.078 57.895 0.00 0.00 34.64 4.61
489 504 1.220749 GATCAGCGGTTGTAGCCCA 59.779 57.895 0.00 0.00 34.64 5.36
490 505 1.523938 GGATCAGCGGTTGTAGCCC 60.524 63.158 0.00 0.00 34.64 5.19
491 506 0.750850 TAGGATCAGCGGTTGTAGCC 59.249 55.000 0.00 0.00 34.64 3.93
492 507 2.159085 ACTTAGGATCAGCGGTTGTAGC 60.159 50.000 0.00 0.00 0.00 3.58
493 508 3.119101 ACACTTAGGATCAGCGGTTGTAG 60.119 47.826 0.00 0.00 0.00 2.74
494 509 2.829720 ACACTTAGGATCAGCGGTTGTA 59.170 45.455 0.00 0.00 0.00 2.41
495 510 1.623811 ACACTTAGGATCAGCGGTTGT 59.376 47.619 0.00 0.00 0.00 3.32
496 511 2.271800 GACACTTAGGATCAGCGGTTG 58.728 52.381 0.00 0.00 0.00 3.77
497 512 1.135083 CGACACTTAGGATCAGCGGTT 60.135 52.381 0.00 0.00 0.00 4.44
498 513 0.456221 CGACACTTAGGATCAGCGGT 59.544 55.000 0.00 0.00 0.00 5.68
499 514 0.456221 ACGACACTTAGGATCAGCGG 59.544 55.000 0.00 0.00 0.00 5.52
500 515 1.135373 ACACGACACTTAGGATCAGCG 60.135 52.381 0.00 0.00 0.00 5.18
501 516 2.094700 TCACACGACACTTAGGATCAGC 60.095 50.000 0.00 0.00 0.00 4.26
502 517 3.850122 TCACACGACACTTAGGATCAG 57.150 47.619 0.00 0.00 0.00 2.90
503 518 4.801330 AATCACACGACACTTAGGATCA 57.199 40.909 0.00 0.00 0.00 2.92
504 519 6.073222 ACAAAAATCACACGACACTTAGGATC 60.073 38.462 0.00 0.00 0.00 3.36
505 520 5.763204 ACAAAAATCACACGACACTTAGGAT 59.237 36.000 0.00 0.00 0.00 3.24
506 521 5.120399 ACAAAAATCACACGACACTTAGGA 58.880 37.500 0.00 0.00 0.00 2.94
507 522 5.418310 ACAAAAATCACACGACACTTAGG 57.582 39.130 0.00 0.00 0.00 2.69
508 523 6.715464 AGAACAAAAATCACACGACACTTAG 58.285 36.000 0.00 0.00 0.00 2.18
509 524 6.238266 GGAGAACAAAAATCACACGACACTTA 60.238 38.462 0.00 0.00 0.00 2.24
510 525 5.448632 GGAGAACAAAAATCACACGACACTT 60.449 40.000 0.00 0.00 0.00 3.16
511 526 4.035208 GGAGAACAAAAATCACACGACACT 59.965 41.667 0.00 0.00 0.00 3.55
512 527 4.201871 TGGAGAACAAAAATCACACGACAC 60.202 41.667 0.00 0.00 0.00 3.67
513 528 3.942115 TGGAGAACAAAAATCACACGACA 59.058 39.130 0.00 0.00 0.00 4.35
514 529 4.035208 AGTGGAGAACAAAAATCACACGAC 59.965 41.667 0.00 0.00 34.31 4.34
515 530 4.196193 AGTGGAGAACAAAAATCACACGA 58.804 39.130 0.00 0.00 34.31 4.35
516 531 4.527564 GAGTGGAGAACAAAAATCACACG 58.472 43.478 0.00 0.00 34.31 4.49
517 532 4.338118 TGGAGTGGAGAACAAAAATCACAC 59.662 41.667 0.00 0.00 0.00 3.82
518 533 4.531854 TGGAGTGGAGAACAAAAATCACA 58.468 39.130 0.00 0.00 0.00 3.58
519 534 5.617751 CGATGGAGTGGAGAACAAAAATCAC 60.618 44.000 0.00 0.00 0.00 3.06
520 535 4.455533 CGATGGAGTGGAGAACAAAAATCA 59.544 41.667 0.00 0.00 0.00 2.57
521 536 4.672801 GCGATGGAGTGGAGAACAAAAATC 60.673 45.833 0.00 0.00 0.00 2.17
522 537 3.191371 GCGATGGAGTGGAGAACAAAAAT 59.809 43.478 0.00 0.00 0.00 1.82
523 538 2.552315 GCGATGGAGTGGAGAACAAAAA 59.448 45.455 0.00 0.00 0.00 1.94
524 539 2.151202 GCGATGGAGTGGAGAACAAAA 58.849 47.619 0.00 0.00 0.00 2.44
525 540 1.610624 GGCGATGGAGTGGAGAACAAA 60.611 52.381 0.00 0.00 0.00 2.83
526 541 0.036388 GGCGATGGAGTGGAGAACAA 60.036 55.000 0.00 0.00 0.00 2.83
527 542 1.596934 GGCGATGGAGTGGAGAACA 59.403 57.895 0.00 0.00 0.00 3.18
528 543 1.153349 GGGCGATGGAGTGGAGAAC 60.153 63.158 0.00 0.00 0.00 3.01
529 544 2.721167 CGGGCGATGGAGTGGAGAA 61.721 63.158 0.00 0.00 0.00 2.87
530 545 3.147595 CGGGCGATGGAGTGGAGA 61.148 66.667 0.00 0.00 0.00 3.71
531 546 4.899239 GCGGGCGATGGAGTGGAG 62.899 72.222 0.00 0.00 0.00 3.86
534 549 4.758251 TGTGCGGGCGATGGAGTG 62.758 66.667 0.00 0.00 0.00 3.51
535 550 1.966901 TAATGTGCGGGCGATGGAGT 61.967 55.000 0.00 0.00 0.00 3.85
536 551 0.813610 TTAATGTGCGGGCGATGGAG 60.814 55.000 0.00 0.00 0.00 3.86
537 552 0.179032 ATTAATGTGCGGGCGATGGA 60.179 50.000 0.00 0.00 0.00 3.41
538 553 0.667993 AATTAATGTGCGGGCGATGG 59.332 50.000 0.00 0.00 0.00 3.51
539 554 1.334960 GGAATTAATGTGCGGGCGATG 60.335 52.381 0.00 0.00 0.00 3.84
540 555 0.951558 GGAATTAATGTGCGGGCGAT 59.048 50.000 0.00 0.00 0.00 4.58
541 556 1.433053 CGGAATTAATGTGCGGGCGA 61.433 55.000 0.00 0.00 0.00 5.54
542 557 1.010125 CGGAATTAATGTGCGGGCG 60.010 57.895 0.00 0.00 0.00 6.13
543 558 0.736053 TTCGGAATTAATGTGCGGGC 59.264 50.000 10.05 0.00 0.00 6.13
544 559 2.422127 AGTTTCGGAATTAATGTGCGGG 59.578 45.455 10.05 0.00 0.00 6.13
545 560 3.757745 AGTTTCGGAATTAATGTGCGG 57.242 42.857 10.05 0.38 0.00 5.69
546 561 6.102006 TCTAAGTTTCGGAATTAATGTGCG 57.898 37.500 0.00 0.00 0.00 5.34
547 562 7.527457 AGTTCTAAGTTTCGGAATTAATGTGC 58.473 34.615 0.00 0.00 0.00 4.57
548 563 9.329913 CAAGTTCTAAGTTTCGGAATTAATGTG 57.670 33.333 0.00 0.00 0.00 3.21
549 564 8.512138 CCAAGTTCTAAGTTTCGGAATTAATGT 58.488 33.333 0.00 0.00 0.00 2.71
550 565 8.512138 ACCAAGTTCTAAGTTTCGGAATTAATG 58.488 33.333 0.00 0.00 0.00 1.90
551 566 8.512138 CACCAAGTTCTAAGTTTCGGAATTAAT 58.488 33.333 0.00 0.00 0.00 1.40
552 567 7.499895 ACACCAAGTTCTAAGTTTCGGAATTAA 59.500 33.333 0.00 0.00 0.00 1.40
553 568 6.993902 ACACCAAGTTCTAAGTTTCGGAATTA 59.006 34.615 0.00 0.00 0.00 1.40
554 569 5.826208 ACACCAAGTTCTAAGTTTCGGAATT 59.174 36.000 0.00 0.00 0.00 2.17
555 570 5.238650 CACACCAAGTTCTAAGTTTCGGAAT 59.761 40.000 0.00 0.00 0.00 3.01
556 571 4.573201 CACACCAAGTTCTAAGTTTCGGAA 59.427 41.667 0.00 0.00 0.00 4.30
557 572 4.124238 CACACCAAGTTCTAAGTTTCGGA 58.876 43.478 0.00 0.00 0.00 4.55
558 573 4.025145 GTCACACCAAGTTCTAAGTTTCGG 60.025 45.833 0.00 0.00 0.00 4.30
559 574 4.317839 CGTCACACCAAGTTCTAAGTTTCG 60.318 45.833 0.00 0.00 0.00 3.46
560 575 4.569564 ACGTCACACCAAGTTCTAAGTTTC 59.430 41.667 0.00 0.00 0.00 2.78
561 576 4.510571 ACGTCACACCAAGTTCTAAGTTT 58.489 39.130 0.00 0.00 0.00 2.66
562 577 4.117685 GACGTCACACCAAGTTCTAAGTT 58.882 43.478 11.55 0.00 0.00 2.66
563 578 3.492137 GGACGTCACACCAAGTTCTAAGT 60.492 47.826 18.91 0.00 0.00 2.24
564 579 3.057734 GGACGTCACACCAAGTTCTAAG 58.942 50.000 18.91 0.00 0.00 2.18
565 580 2.696707 AGGACGTCACACCAAGTTCTAA 59.303 45.455 18.91 0.00 0.00 2.10
566 581 2.035449 CAGGACGTCACACCAAGTTCTA 59.965 50.000 18.91 0.00 0.00 2.10
567 582 1.120530 AGGACGTCACACCAAGTTCT 58.879 50.000 18.91 0.00 0.00 3.01
568 583 1.217882 CAGGACGTCACACCAAGTTC 58.782 55.000 18.91 0.00 0.00 3.01
569 584 0.814010 GCAGGACGTCACACCAAGTT 60.814 55.000 18.91 0.00 0.00 2.66
570 585 1.227556 GCAGGACGTCACACCAAGT 60.228 57.895 18.91 0.00 0.00 3.16
571 586 0.813610 TTGCAGGACGTCACACCAAG 60.814 55.000 18.91 0.00 0.00 3.61
572 587 0.393132 TTTGCAGGACGTCACACCAA 60.393 50.000 18.91 11.39 0.00 3.67
573 588 0.393132 TTTTGCAGGACGTCACACCA 60.393 50.000 18.91 5.64 0.00 4.17
574 589 0.951558 ATTTTGCAGGACGTCACACC 59.048 50.000 18.91 0.00 0.00 4.16
575 590 1.069227 GGATTTTGCAGGACGTCACAC 60.069 52.381 18.91 5.94 0.00 3.82
576 591 1.234821 GGATTTTGCAGGACGTCACA 58.765 50.000 18.91 9.47 0.00 3.58
577 592 1.234821 TGGATTTTGCAGGACGTCAC 58.765 50.000 18.91 6.91 0.00 3.67
578 593 1.606668 GTTGGATTTTGCAGGACGTCA 59.393 47.619 18.91 0.00 0.00 4.35
579 594 1.399727 CGTTGGATTTTGCAGGACGTC 60.400 52.381 7.13 7.13 0.00 4.34
580 595 0.591170 CGTTGGATTTTGCAGGACGT 59.409 50.000 0.00 0.00 0.00 4.34
581 596 0.871722 TCGTTGGATTTTGCAGGACG 59.128 50.000 0.00 0.00 0.00 4.79
582 597 1.880027 AGTCGTTGGATTTTGCAGGAC 59.120 47.619 0.00 0.00 0.00 3.85
583 598 2.270352 AGTCGTTGGATTTTGCAGGA 57.730 45.000 0.00 0.00 0.00 3.86
584 599 3.052036 CAAAGTCGTTGGATTTTGCAGG 58.948 45.455 0.25 0.00 41.14 4.85
588 603 6.033831 GTGATATGCAAAGTCGTTGGATTTTG 59.966 38.462 10.47 7.46 45.20 2.44
589 604 6.092748 GTGATATGCAAAGTCGTTGGATTTT 58.907 36.000 10.47 0.40 45.20 1.82
590 605 5.640732 GTGATATGCAAAGTCGTTGGATTT 58.359 37.500 10.47 3.58 45.20 2.17
591 606 4.201812 CGTGATATGCAAAGTCGTTGGATT 60.202 41.667 10.47 0.40 45.20 3.01
593 608 2.670905 CGTGATATGCAAAGTCGTTGGA 59.329 45.455 0.00 0.00 42.34 3.53
594 609 2.670905 TCGTGATATGCAAAGTCGTTGG 59.329 45.455 0.00 0.00 37.73 3.77
595 610 3.242091 CCTCGTGATATGCAAAGTCGTTG 60.242 47.826 0.00 0.00 40.50 4.10
596 611 2.930040 CCTCGTGATATGCAAAGTCGTT 59.070 45.455 0.00 0.00 0.00 3.85
597 612 2.540515 CCTCGTGATATGCAAAGTCGT 58.459 47.619 0.00 0.00 0.00 4.34
598 613 1.258982 GCCTCGTGATATGCAAAGTCG 59.741 52.381 0.00 0.00 0.00 4.18
599 614 2.279741 TGCCTCGTGATATGCAAAGTC 58.720 47.619 0.00 0.00 0.00 3.01
600 615 2.401583 TGCCTCGTGATATGCAAAGT 57.598 45.000 0.00 0.00 0.00 2.66
601 616 3.976793 ATTGCCTCGTGATATGCAAAG 57.023 42.857 0.00 0.00 45.71 2.77
602 617 4.702831 TCTATTGCCTCGTGATATGCAAA 58.297 39.130 0.00 0.00 45.71 3.68
603 618 4.309933 CTCTATTGCCTCGTGATATGCAA 58.690 43.478 0.00 0.00 46.51 4.08
604 619 3.862264 GCTCTATTGCCTCGTGATATGCA 60.862 47.826 0.00 0.00 0.00 3.96
605 620 2.670414 GCTCTATTGCCTCGTGATATGC 59.330 50.000 0.00 0.00 0.00 3.14
606 621 2.919859 CGCTCTATTGCCTCGTGATATG 59.080 50.000 0.00 0.00 0.00 1.78
607 622 2.558795 ACGCTCTATTGCCTCGTGATAT 59.441 45.455 0.00 0.00 31.74 1.63
608 623 1.954382 ACGCTCTATTGCCTCGTGATA 59.046 47.619 0.00 0.00 31.74 2.15
609 624 0.747255 ACGCTCTATTGCCTCGTGAT 59.253 50.000 0.00 0.00 31.74 3.06
610 625 0.100682 GACGCTCTATTGCCTCGTGA 59.899 55.000 0.00 0.00 33.21 4.35
611 626 0.101399 AGACGCTCTATTGCCTCGTG 59.899 55.000 0.00 0.00 33.21 4.35
612 627 0.101399 CAGACGCTCTATTGCCTCGT 59.899 55.000 0.00 0.00 35.98 4.18
613 628 0.382158 TCAGACGCTCTATTGCCTCG 59.618 55.000 0.00 0.00 0.00 4.63
614 629 2.197577 GTTCAGACGCTCTATTGCCTC 58.802 52.381 0.00 0.00 0.00 4.70
615 630 1.550524 TGTTCAGACGCTCTATTGCCT 59.449 47.619 0.00 0.00 0.00 4.75
616 631 1.661112 GTGTTCAGACGCTCTATTGCC 59.339 52.381 0.00 0.00 33.49 4.52
617 632 1.321743 CGTGTTCAGACGCTCTATTGC 59.678 52.381 0.00 0.00 34.11 3.56
618 633 2.342651 CACGTGTTCAGACGCTCTATTG 59.657 50.000 7.58 0.00 43.33 1.90
619 634 2.030185 ACACGTGTTCAGACGCTCTATT 60.030 45.455 17.22 0.00 43.33 1.73
620 635 1.540267 ACACGTGTTCAGACGCTCTAT 59.460 47.619 17.22 0.00 43.33 1.98
621 636 0.949397 ACACGTGTTCAGACGCTCTA 59.051 50.000 17.22 0.00 43.33 2.43
622 637 0.949397 TACACGTGTTCAGACGCTCT 59.051 50.000 28.55 0.00 43.33 4.09
623 638 1.328439 CTACACGTGTTCAGACGCTC 58.672 55.000 28.55 0.00 43.33 5.03
624 639 0.039437 CCTACACGTGTTCAGACGCT 60.039 55.000 28.55 0.00 43.33 5.07
625 640 0.318445 ACCTACACGTGTTCAGACGC 60.318 55.000 28.55 0.00 43.33 5.19
626 641 2.413765 CCTACCTACACGTGTTCAGACG 60.414 54.545 28.55 9.59 45.09 4.18
627 642 2.555757 ACCTACCTACACGTGTTCAGAC 59.444 50.000 28.55 0.00 0.00 3.51
628 643 2.555325 CACCTACCTACACGTGTTCAGA 59.445 50.000 28.55 7.71 0.00 3.27
629 644 2.295349 ACACCTACCTACACGTGTTCAG 59.705 50.000 28.55 18.70 36.03 3.02
630 645 2.034939 CACACCTACCTACACGTGTTCA 59.965 50.000 28.55 8.97 37.35 3.18
631 646 2.035066 ACACACCTACCTACACGTGTTC 59.965 50.000 28.55 0.00 37.35 3.18
632 647 2.034124 ACACACCTACCTACACGTGTT 58.966 47.619 28.55 11.88 37.35 3.32
633 648 1.338973 CACACACCTACCTACACGTGT 59.661 52.381 26.52 26.52 39.98 4.49
634 649 1.933500 GCACACACCTACCTACACGTG 60.934 57.143 15.48 15.48 0.00 4.49
635 650 0.316204 GCACACACCTACCTACACGT 59.684 55.000 0.00 0.00 0.00 4.49
636 651 0.601558 AGCACACACCTACCTACACG 59.398 55.000 0.00 0.00 0.00 4.49
637 652 1.402456 CGAGCACACACCTACCTACAC 60.402 57.143 0.00 0.00 0.00 2.90
638 653 0.885879 CGAGCACACACCTACCTACA 59.114 55.000 0.00 0.00 0.00 2.74
639 654 0.886563 ACGAGCACACACCTACCTAC 59.113 55.000 0.00 0.00 0.00 3.18
640 655 0.885879 CACGAGCACACACCTACCTA 59.114 55.000 0.00 0.00 0.00 3.08
641 656 1.666011 CACGAGCACACACCTACCT 59.334 57.895 0.00 0.00 0.00 3.08
642 657 2.027625 GCACGAGCACACACCTACC 61.028 63.158 0.00 0.00 41.58 3.18
643 658 2.372690 CGCACGAGCACACACCTAC 61.373 63.158 5.50 0.00 42.27 3.18
644 659 2.049526 CGCACGAGCACACACCTA 60.050 61.111 5.50 0.00 42.27 3.08
645 660 3.848347 CTCGCACGAGCACACACCT 62.848 63.158 7.18 0.00 42.27 4.00
646 661 3.406361 CTCGCACGAGCACACACC 61.406 66.667 7.18 0.00 42.27 4.16
647 662 1.762222 AAACTCGCACGAGCACACAC 61.762 55.000 19.35 0.00 45.54 3.82
648 663 1.087202 AAAACTCGCACGAGCACACA 61.087 50.000 19.35 0.00 45.54 3.72
649 664 0.383124 GAAAACTCGCACGAGCACAC 60.383 55.000 19.35 6.14 45.54 3.82
650 665 0.808060 TGAAAACTCGCACGAGCACA 60.808 50.000 19.35 11.33 45.54 4.57
651 666 0.111089 CTGAAAACTCGCACGAGCAC 60.111 55.000 19.35 9.12 45.54 4.40
652 667 1.221466 CCTGAAAACTCGCACGAGCA 61.221 55.000 19.35 8.65 45.54 4.26
653 668 1.493311 CCTGAAAACTCGCACGAGC 59.507 57.895 19.35 4.39 45.54 5.03
654 669 1.493311 GCCTGAAAACTCGCACGAG 59.507 57.895 17.97 17.97 46.91 4.18
655 670 1.959226 GGCCTGAAAACTCGCACGA 60.959 57.895 0.00 0.00 0.00 4.35
656 671 1.507141 AAGGCCTGAAAACTCGCACG 61.507 55.000 5.69 0.00 0.00 5.34
657 672 0.040067 CAAGGCCTGAAAACTCGCAC 60.040 55.000 5.69 0.00 0.00 5.34
658 673 0.465460 ACAAGGCCTGAAAACTCGCA 60.465 50.000 5.69 0.00 0.00 5.10
659 674 0.238553 GACAAGGCCTGAAAACTCGC 59.761 55.000 5.69 0.00 0.00 5.03
660 675 0.512952 CGACAAGGCCTGAAAACTCG 59.487 55.000 5.69 2.66 0.00 4.18
661 676 0.238553 GCGACAAGGCCTGAAAACTC 59.761 55.000 5.69 0.00 0.00 3.01
662 677 2.331265 GCGACAAGGCCTGAAAACT 58.669 52.632 5.69 0.00 0.00 2.66
663 678 4.944249 GCGACAAGGCCTGAAAAC 57.056 55.556 5.69 0.00 0.00 2.43
671 686 1.532868 CTTATGCATAGGCGACAAGGC 59.467 52.381 6.50 0.00 45.35 4.35
672 687 1.532868 GCTTATGCATAGGCGACAAGG 59.467 52.381 23.02 0.00 45.35 3.61
673 688 2.222678 CAGCTTATGCATAGGCGACAAG 59.777 50.000 28.63 15.09 45.35 3.16
674 689 2.158971 TCAGCTTATGCATAGGCGACAA 60.159 45.455 28.63 16.01 45.35 3.18
675 690 1.412343 TCAGCTTATGCATAGGCGACA 59.588 47.619 28.63 16.98 45.35 4.35
676 691 2.154854 TCAGCTTATGCATAGGCGAC 57.845 50.000 28.63 9.04 45.35 5.19
677 692 3.407424 AATCAGCTTATGCATAGGCGA 57.593 42.857 28.63 26.76 45.35 5.54
678 693 4.692625 ACTAAATCAGCTTATGCATAGGCG 59.307 41.667 28.63 23.50 45.35 5.52
679 694 5.702670 TCACTAAATCAGCTTATGCATAGGC 59.297 40.000 28.20 28.20 42.74 3.93
680 695 7.918536 ATCACTAAATCAGCTTATGCATAGG 57.081 36.000 11.33 11.33 42.74 2.57
681 696 8.235226 CCAATCACTAAATCAGCTTATGCATAG 58.765 37.037 6.50 2.95 42.74 2.23
682 697 7.938490 TCCAATCACTAAATCAGCTTATGCATA 59.062 33.333 1.16 1.16 42.74 3.14
683 698 6.774170 TCCAATCACTAAATCAGCTTATGCAT 59.226 34.615 3.79 3.79 42.74 3.96
684 699 6.038603 GTCCAATCACTAAATCAGCTTATGCA 59.961 38.462 3.16 0.00 42.74 3.96
685 700 6.038603 TGTCCAATCACTAAATCAGCTTATGC 59.961 38.462 0.00 0.00 40.05 3.14
686 701 7.558161 TGTCCAATCACTAAATCAGCTTATG 57.442 36.000 0.00 0.00 0.00 1.90
687 702 8.757982 AATGTCCAATCACTAAATCAGCTTAT 57.242 30.769 0.00 0.00 0.00 1.73
688 703 8.049117 AGAATGTCCAATCACTAAATCAGCTTA 58.951 33.333 0.00 0.00 0.00 3.09
689 704 6.888632 AGAATGTCCAATCACTAAATCAGCTT 59.111 34.615 0.00 0.00 0.00 3.74
690 705 6.318144 CAGAATGTCCAATCACTAAATCAGCT 59.682 38.462 0.00 0.00 0.00 4.24
691 706 6.493116 CAGAATGTCCAATCACTAAATCAGC 58.507 40.000 0.00 0.00 0.00 4.26
754 769 5.163519 CGAGGAATGTCCAATGCCTATTTTT 60.164 40.000 0.00 0.00 39.61 1.94
755 770 4.339247 CGAGGAATGTCCAATGCCTATTTT 59.661 41.667 0.00 0.00 39.61 1.82
756 771 3.885297 CGAGGAATGTCCAATGCCTATTT 59.115 43.478 0.00 0.00 39.61 1.40
757 772 3.480470 CGAGGAATGTCCAATGCCTATT 58.520 45.455 0.00 0.00 39.61 1.73
758 773 2.224621 CCGAGGAATGTCCAATGCCTAT 60.225 50.000 0.00 0.00 39.61 2.57
759 774 1.140852 CCGAGGAATGTCCAATGCCTA 59.859 52.381 0.00 0.00 39.61 3.93
760 775 0.107017 CCGAGGAATGTCCAATGCCT 60.107 55.000 0.00 0.00 39.61 4.75
761 776 0.394352 ACCGAGGAATGTCCAATGCC 60.394 55.000 0.00 0.00 39.61 4.40
762 777 1.017387 GACCGAGGAATGTCCAATGC 58.983 55.000 0.00 0.00 39.61 3.56
763 778 1.134818 TCGACCGAGGAATGTCCAATG 60.135 52.381 0.00 0.00 39.61 2.82
764 779 1.191535 TCGACCGAGGAATGTCCAAT 58.808 50.000 0.00 0.00 39.61 3.16
765 780 1.136305 GATCGACCGAGGAATGTCCAA 59.864 52.381 0.00 0.00 39.61 3.53
766 781 0.744874 GATCGACCGAGGAATGTCCA 59.255 55.000 0.00 0.00 39.61 4.02
767 782 0.032267 GGATCGACCGAGGAATGTCC 59.968 60.000 0.00 0.00 36.58 4.02
768 783 0.744874 TGGATCGACCGAGGAATGTC 59.255 55.000 0.00 0.00 42.61 3.06
769 784 0.460311 GTGGATCGACCGAGGAATGT 59.540 55.000 0.00 0.00 42.61 2.71
770 785 0.459899 TGTGGATCGACCGAGGAATG 59.540 55.000 5.33 0.00 42.61 2.67
771 786 1.191535 TTGTGGATCGACCGAGGAAT 58.808 50.000 5.33 0.00 42.61 3.01
772 787 0.970640 TTTGTGGATCGACCGAGGAA 59.029 50.000 5.33 0.00 42.61 3.36
773 788 1.191535 ATTTGTGGATCGACCGAGGA 58.808 50.000 5.33 0.00 42.61 3.71
774 789 1.933853 GAATTTGTGGATCGACCGAGG 59.066 52.381 5.33 0.00 42.61 4.63
775 790 1.588404 CGAATTTGTGGATCGACCGAG 59.412 52.381 5.33 0.00 42.61 4.63
776 791 1.202817 TCGAATTTGTGGATCGACCGA 59.797 47.619 5.33 3.96 40.34 4.69
777 792 1.588404 CTCGAATTTGTGGATCGACCG 59.412 52.381 5.33 1.58 40.34 4.79
778 793 2.348666 CACTCGAATTTGTGGATCGACC 59.651 50.000 5.33 0.00 40.34 4.79
779 794 2.222819 GCACTCGAATTTGTGGATCGAC 60.223 50.000 0.12 0.12 40.34 4.20
780 795 1.999735 GCACTCGAATTTGTGGATCGA 59.000 47.619 4.88 0.00 42.71 3.59
781 796 1.062587 GGCACTCGAATTTGTGGATCG 59.937 52.381 4.88 0.00 37.90 3.69
782 797 2.083774 TGGCACTCGAATTTGTGGATC 58.916 47.619 4.88 0.00 34.99 3.36
783 798 2.198827 TGGCACTCGAATTTGTGGAT 57.801 45.000 4.88 0.00 34.99 3.41
784 799 1.974265 TTGGCACTCGAATTTGTGGA 58.026 45.000 4.88 0.00 34.99 4.02
785 800 3.244976 GAATTGGCACTCGAATTTGTGG 58.755 45.455 4.88 0.08 34.99 4.17
786 801 3.244976 GGAATTGGCACTCGAATTTGTG 58.755 45.455 0.00 0.00 37.26 3.33
787 802 2.095263 CGGAATTGGCACTCGAATTTGT 60.095 45.455 0.00 0.00 0.00 2.83
788 803 2.095263 ACGGAATTGGCACTCGAATTTG 60.095 45.455 0.00 0.00 0.00 2.32
789 804 2.159382 ACGGAATTGGCACTCGAATTT 58.841 42.857 0.00 0.00 0.00 1.82
790 805 1.737793 GACGGAATTGGCACTCGAATT 59.262 47.619 0.00 0.00 0.00 2.17
791 806 1.066143 AGACGGAATTGGCACTCGAAT 60.066 47.619 0.00 0.00 0.00 3.34
792 807 0.320374 AGACGGAATTGGCACTCGAA 59.680 50.000 0.00 0.00 0.00 3.71
793 808 0.389817 CAGACGGAATTGGCACTCGA 60.390 55.000 0.00 0.00 0.00 4.04
794 809 1.970917 GCAGACGGAATTGGCACTCG 61.971 60.000 0.00 0.00 0.00 4.18
795 810 1.796796 GCAGACGGAATTGGCACTC 59.203 57.895 0.00 0.00 0.00 3.51
796 811 2.034879 CGCAGACGGAATTGGCACT 61.035 57.895 0.00 0.00 34.97 4.40
797 812 2.240612 GACGCAGACGGAATTGGCAC 62.241 60.000 0.00 0.00 46.04 5.01
798 813 2.031919 ACGCAGACGGAATTGGCA 59.968 55.556 0.00 0.00 46.04 4.92
799 814 2.750888 GGACGCAGACGGAATTGGC 61.751 63.158 0.00 0.00 46.04 4.52
800 815 0.673644 AAGGACGCAGACGGAATTGG 60.674 55.000 0.00 0.00 46.04 3.16
801 816 1.156736 AAAGGACGCAGACGGAATTG 58.843 50.000 0.00 0.00 46.04 2.32
802 817 2.754946 TAAAGGACGCAGACGGAATT 57.245 45.000 0.00 0.00 46.04 2.17
803 818 2.483188 GGATAAAGGACGCAGACGGAAT 60.483 50.000 0.00 0.00 46.04 3.01
804 819 1.134907 GGATAAAGGACGCAGACGGAA 60.135 52.381 0.00 0.00 46.04 4.30
805 820 0.458669 GGATAAAGGACGCAGACGGA 59.541 55.000 0.00 0.00 46.04 4.69
806 821 0.174845 TGGATAAAGGACGCAGACGG 59.825 55.000 0.00 0.00 46.04 4.79
808 823 1.278238 CGTGGATAAAGGACGCAGAC 58.722 55.000 0.00 0.00 0.00 3.51
809 824 0.892755 ACGTGGATAAAGGACGCAGA 59.107 50.000 0.00 0.00 36.56 4.26
810 825 0.999406 CACGTGGATAAAGGACGCAG 59.001 55.000 7.95 0.00 36.56 5.18
811 826 0.319083 ACACGTGGATAAAGGACGCA 59.681 50.000 21.57 0.00 36.56 5.24
812 827 1.127951 CAACACGTGGATAAAGGACGC 59.872 52.381 21.57 0.00 36.56 5.19
813 828 2.409975 ACAACACGTGGATAAAGGACG 58.590 47.619 21.57 0.00 39.03 4.79
814 829 4.823790 AAACAACACGTGGATAAAGGAC 57.176 40.909 21.57 0.00 0.00 3.85
815 830 5.613329 AGTAAACAACACGTGGATAAAGGA 58.387 37.500 21.57 0.00 0.00 3.36
816 831 5.699458 AGAGTAAACAACACGTGGATAAAGG 59.301 40.000 21.57 3.34 0.00 3.11
817 832 6.780706 AGAGTAAACAACACGTGGATAAAG 57.219 37.500 21.57 5.14 0.00 1.85
818 833 7.411274 CAAAGAGTAAACAACACGTGGATAAA 58.589 34.615 21.57 0.00 0.00 1.40
819 834 6.512091 GCAAAGAGTAAACAACACGTGGATAA 60.512 38.462 21.57 0.00 0.00 1.75
820 835 5.049954 GCAAAGAGTAAACAACACGTGGATA 60.050 40.000 21.57 2.35 0.00 2.59
821 836 4.261031 GCAAAGAGTAAACAACACGTGGAT 60.261 41.667 21.57 5.28 0.00 3.41
822 837 3.064271 GCAAAGAGTAAACAACACGTGGA 59.936 43.478 21.57 0.00 0.00 4.02
823 838 3.181505 TGCAAAGAGTAAACAACACGTGG 60.182 43.478 21.57 5.28 0.00 4.94
824 839 3.783943 GTGCAAAGAGTAAACAACACGTG 59.216 43.478 15.48 15.48 0.00 4.49
825 840 3.687698 AGTGCAAAGAGTAAACAACACGT 59.312 39.130 0.00 0.00 32.22 4.49
826 841 4.028383 CAGTGCAAAGAGTAAACAACACG 58.972 43.478 0.00 0.00 32.22 4.49
827 842 3.791353 GCAGTGCAAAGAGTAAACAACAC 59.209 43.478 11.09 0.00 0.00 3.32
828 843 3.486708 CGCAGTGCAAAGAGTAAACAACA 60.487 43.478 16.83 0.00 0.00 3.33
829 844 3.035942 CGCAGTGCAAAGAGTAAACAAC 58.964 45.455 16.83 0.00 0.00 3.32
830 845 2.032799 CCGCAGTGCAAAGAGTAAACAA 59.967 45.455 16.83 0.00 0.00 2.83
831 846 1.601903 CCGCAGTGCAAAGAGTAAACA 59.398 47.619 16.83 0.00 0.00 2.83
832 847 1.663161 GCCGCAGTGCAAAGAGTAAAC 60.663 52.381 16.83 0.00 0.00 2.01
833 848 0.591170 GCCGCAGTGCAAAGAGTAAA 59.409 50.000 16.83 0.00 0.00 2.01
834 849 0.533978 TGCCGCAGTGCAAAGAGTAA 60.534 50.000 16.83 0.00 38.56 2.24
835 850 1.070615 TGCCGCAGTGCAAAGAGTA 59.929 52.632 16.83 0.00 38.56 2.59
836 851 2.203195 TGCCGCAGTGCAAAGAGT 60.203 55.556 16.83 0.00 38.56 3.24
837 852 2.253452 GTGCCGCAGTGCAAAGAG 59.747 61.111 16.83 0.00 44.11 2.85
838 853 3.648982 CGTGCCGCAGTGCAAAGA 61.649 61.111 16.83 0.00 44.11 2.52
855 870 1.021202 TATGCTATTGTTGTGCCGGC 58.979 50.000 22.73 22.73 0.00 6.13
856 871 2.605338 GCATATGCTATTGTTGTGCCGG 60.605 50.000 20.64 0.00 38.21 6.13
910 925 0.171007 CATGTCACGTTCCCATTGGC 59.829 55.000 0.00 0.00 0.00 4.52
977 994 0.095935 CGCGTCAATGCCTCTGAAAG 59.904 55.000 0.00 0.00 0.00 2.62
990 1007 1.720894 CATTGGCATAAGCGCGTCA 59.279 52.632 8.43 0.00 43.41 4.35
991 1008 1.655350 GCATTGGCATAAGCGCGTC 60.655 57.895 8.43 0.00 43.41 5.19
1008 1025 1.597742 CTGTATGGTATGGTGCAGGC 58.402 55.000 0.00 0.00 0.00 4.85
1009 1026 1.134128 TGCTGTATGGTATGGTGCAGG 60.134 52.381 0.00 0.00 0.00 4.85
1016 1033 3.534554 TGAGTTGCTGCTGTATGGTATG 58.465 45.455 0.00 0.00 0.00 2.39
1018 1035 2.093500 CCTGAGTTGCTGCTGTATGGTA 60.093 50.000 0.00 0.00 0.00 3.25
1221 1241 1.136110 TGATACGCATCGACCACATGT 59.864 47.619 0.00 0.00 33.51 3.21
1234 1254 7.336161 AGGGTAGATATTACTGATGATACGC 57.664 40.000 0.00 0.00 0.00 4.42
1245 1265 7.010339 AGAAGGCATCAAGGGTAGATATTAC 57.990 40.000 0.00 0.00 0.00 1.89
1265 1285 1.766143 GCCCTGCGTGCGATAAGAAG 61.766 60.000 0.00 0.00 0.00 2.85
1388 1418 2.452505 CTTCTTCTCCTTCTCCTCCGT 58.547 52.381 0.00 0.00 0.00 4.69
1705 1790 4.746611 TCACAGATAGTAGCGCATCAATTG 59.253 41.667 11.47 0.00 0.00 2.32
1753 1842 6.092670 ACTTCATCTACGTTGTTCATCATTGG 59.907 38.462 0.00 0.00 0.00 3.16
1800 2030 3.138304 CGTGGTGAAGATCAAGTTCCAA 58.862 45.455 0.00 0.00 0.00 3.53
1825 2055 3.322526 CGGAAATTAGCCGGCAAAC 57.677 52.632 31.54 12.97 44.87 2.93
1841 2071 6.811665 TCATAAGTTTGAACATAGTCTGACGG 59.188 38.462 1.52 0.00 0.00 4.79
1875 2105 6.545666 TCTGGCATGTATACCATTTTTGGTAG 59.454 38.462 10.37 0.00 46.34 3.18
1887 2120 6.291377 TCCAAGAAAGATCTGGCATGTATAC 58.709 40.000 0.00 0.00 35.59 1.47
1921 2154 8.759481 TGTATAGGAATGCCATGTATTTTGAA 57.241 30.769 0.00 0.00 36.29 2.69
1933 2166 8.465273 AGGAGTAATTTTTGTATAGGAATGCC 57.535 34.615 0.00 0.00 0.00 4.40
1997 2277 4.158764 GCACTACCTCTGTTCTGATGTACT 59.841 45.833 0.00 0.00 0.00 2.73
1998 2278 4.425520 GCACTACCTCTGTTCTGATGTAC 58.574 47.826 0.00 0.00 0.00 2.90
1999 2279 3.128764 CGCACTACCTCTGTTCTGATGTA 59.871 47.826 0.00 0.00 0.00 2.29
2018 2298 0.472898 TCTAGGAGCTAGCCTACGCA 59.527 55.000 12.13 0.00 39.50 5.24
2024 2304 4.081917 GTCCATTGTATCTAGGAGCTAGCC 60.082 50.000 12.13 2.59 34.36 3.93
2029 2309 3.556004 GCAGGTCCATTGTATCTAGGAGC 60.556 52.174 0.00 0.00 46.24 4.70
2048 2328 3.427503 CGCCCAAAGTTTATTACTGGCAG 60.428 47.826 14.16 14.16 41.34 4.85
2065 2345 0.960364 GTGGATTCAAGAAGCGCCCA 60.960 55.000 2.29 0.00 0.00 5.36
2077 2357 7.150783 ACTTCAAAAGCAGATTAGTGGATTC 57.849 36.000 0.00 0.00 0.00 2.52
2139 2419 4.340950 TCCAAAACCTGAATGAACTTGTCC 59.659 41.667 0.00 0.00 0.00 4.02
2326 2609 3.991773 CCGAGAAGACGTTATGTTTTGGA 59.008 43.478 0.00 0.00 0.00 3.53
2437 2720 2.019984 GATCTGGCCAAGGTAAAGCTG 58.980 52.381 7.01 0.00 0.00 4.24
2550 2833 4.483311 GCTTGAATTTCTGAAGGAAGCAG 58.517 43.478 14.56 0.00 35.50 4.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.