Multiple sequence alignment - TraesCS5B01G245800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G245800 chr5B 100.000 3191 0 0 1 3191 426996020 426992830 0.000000e+00 5893.0
1 TraesCS5B01G245800 chr5B 94.444 144 8 0 3048 3191 696200036 696200179 4.140000e-54 222.0
2 TraesCS5B01G245800 chr5A 87.236 2507 156 86 557 2963 461939545 461937103 0.000000e+00 2706.0
3 TraesCS5B01G245800 chr5A 85.386 479 32 14 2508 2963 461931993 461931530 2.240000e-126 462.0
4 TraesCS5B01G245800 chr5A 88.264 409 19 11 2013 2405 461932642 461932247 2.240000e-126 462.0
5 TraesCS5B01G245800 chr5A 87.261 314 25 4 2656 2963 461930629 461930325 8.470000e-91 344.0
6 TraesCS5B01G245800 chr5A 85.430 151 15 2 1887 2036 428809490 428809346 1.980000e-32 150.0
7 TraesCS5B01G245800 chr5D 89.682 1919 96 51 555 2404 361405455 361403570 0.000000e+00 2353.0
8 TraesCS5B01G245800 chr5D 93.548 496 21 6 2476 2961 361401752 361401258 0.000000e+00 728.0
9 TraesCS5B01G245800 chr3D 80.482 1368 168 49 897 2224 587608115 587609423 0.000000e+00 955.0
10 TraesCS5B01G245800 chr3D 94.444 144 8 0 3048 3191 508553924 508553781 4.140000e-54 222.0
11 TraesCS5B01G245800 chr3D 100.000 28 0 0 1831 1858 19881319 19881346 6.000000e-03 52.8
12 TraesCS5B01G245800 chr3A 82.571 1159 125 35 1112 2224 716988123 716989250 0.000000e+00 950.0
13 TraesCS5B01G245800 chr3A 87.692 65 7 1 2967 3030 101900842 101900906 1.230000e-09 75.0
14 TraesCS5B01G245800 chr3B 81.569 803 92 26 1440 2224 784926604 784927368 2.100000e-171 612.0
15 TraesCS5B01G245800 chr3B 80.824 558 62 22 922 1450 784925598 784926139 2.310000e-106 396.0
16 TraesCS5B01G245800 chr6B 76.675 836 123 45 1130 1911 152108924 152108107 6.410000e-107 398.0
17 TraesCS5B01G245800 chr7D 95.139 144 7 0 3048 3191 94796179 94796036 8.900000e-56 228.0
18 TraesCS5B01G245800 chr7D 93.056 144 10 0 3048 3191 115137615 115137758 8.970000e-51 211.0
19 TraesCS5B01G245800 chr1B 95.139 144 7 0 3048 3191 680835990 680836133 8.900000e-56 228.0
20 TraesCS5B01G245800 chr1D 94.444 144 8 0 3048 3191 473956383 473956526 4.140000e-54 222.0
21 TraesCS5B01G245800 chr1D 92.361 144 11 0 3048 3191 475114262 475114405 4.170000e-49 206.0
22 TraesCS5B01G245800 chr6D 92.361 144 11 0 3048 3191 427708470 427708327 4.170000e-49 206.0
23 TraesCS5B01G245800 chr2D 92.361 144 6 3 3048 3191 575765116 575765254 1.940000e-47 200.0
24 TraesCS5B01G245800 chr4A 92.701 137 6 4 2081 2213 2701376 2701512 9.030000e-46 195.0
25 TraesCS5B01G245800 chr2A 91.971 137 7 3 2081 2213 614570545 614570681 4.200000e-44 189.0
26 TraesCS5B01G245800 chr4B 81.046 153 25 4 1369 1519 592673653 592673503 5.590000e-23 119.0
27 TraesCS5B01G245800 chr7A 85.185 81 11 1 2959 3038 637151643 637151723 7.340000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G245800 chr5B 426992830 426996020 3190 True 5893.000000 5893 100.000000 1 3191 1 chr5B.!!$R1 3190
1 TraesCS5B01G245800 chr5A 461937103 461939545 2442 True 2706.000000 2706 87.236000 557 2963 1 chr5A.!!$R2 2406
2 TraesCS5B01G245800 chr5A 461930325 461932642 2317 True 422.666667 462 86.970333 2013 2963 3 chr5A.!!$R3 950
3 TraesCS5B01G245800 chr5D 361401258 361405455 4197 True 1540.500000 2353 91.615000 555 2961 2 chr5D.!!$R1 2406
4 TraesCS5B01G245800 chr3D 587608115 587609423 1308 False 955.000000 955 80.482000 897 2224 1 chr3D.!!$F2 1327
5 TraesCS5B01G245800 chr3A 716988123 716989250 1127 False 950.000000 950 82.571000 1112 2224 1 chr3A.!!$F2 1112
6 TraesCS5B01G245800 chr3B 784925598 784927368 1770 False 504.000000 612 81.196500 922 2224 2 chr3B.!!$F1 1302
7 TraesCS5B01G245800 chr6B 152108107 152108924 817 True 398.000000 398 76.675000 1130 1911 1 chr6B.!!$R1 781

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
471 472 0.034477 AACCTTGGGTCCGGCTTATG 60.034 55.0 0.0 0.0 33.12 1.90 F
779 826 0.107703 TGGACCTAGCAATTCCGCAG 60.108 55.0 0.0 0.0 31.38 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1593 2269 1.077787 TGGTAATTCCTGCGGCTGG 60.078 57.895 18.81 18.81 37.07 4.85 R
2585 5303 1.171308 TAGTCCACCGGTTCTTCTCG 58.829 55.000 2.97 0.00 0.00 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.963878 ACACCAGGATCGGCATTC 57.036 55.556 0.00 0.00 0.00 2.67
18 19 1.990424 ACACCAGGATCGGCATTCA 59.010 52.632 0.00 0.00 0.00 2.57
19 20 0.327924 ACACCAGGATCGGCATTCAA 59.672 50.000 0.00 0.00 0.00 2.69
20 21 0.734889 CACCAGGATCGGCATTCAAC 59.265 55.000 0.00 0.00 0.00 3.18
21 22 0.327924 ACCAGGATCGGCATTCAACA 59.672 50.000 0.00 0.00 0.00 3.33
22 23 1.064463 ACCAGGATCGGCATTCAACAT 60.064 47.619 0.00 0.00 0.00 2.71
23 24 1.335810 CCAGGATCGGCATTCAACATG 59.664 52.381 0.00 0.00 0.00 3.21
24 25 2.291365 CAGGATCGGCATTCAACATGA 58.709 47.619 0.00 0.00 0.00 3.07
25 26 2.882761 CAGGATCGGCATTCAACATGAT 59.117 45.455 0.00 0.00 0.00 2.45
26 27 2.882761 AGGATCGGCATTCAACATGATG 59.117 45.455 0.00 0.00 0.00 3.07
27 28 2.880268 GGATCGGCATTCAACATGATGA 59.120 45.455 0.83 0.83 0.00 2.92
28 29 3.316029 GGATCGGCATTCAACATGATGAA 59.684 43.478 19.22 19.22 43.03 2.57
29 30 4.202040 GGATCGGCATTCAACATGATGAAA 60.202 41.667 20.55 6.06 42.22 2.69
30 31 4.780275 TCGGCATTCAACATGATGAAAA 57.220 36.364 20.55 1.27 42.22 2.29
31 32 5.327616 TCGGCATTCAACATGATGAAAAT 57.672 34.783 20.55 4.43 42.22 1.82
32 33 6.448207 TCGGCATTCAACATGATGAAAATA 57.552 33.333 20.55 0.18 42.22 1.40
33 34 7.041635 TCGGCATTCAACATGATGAAAATAT 57.958 32.000 20.55 3.40 42.22 1.28
34 35 6.919115 TCGGCATTCAACATGATGAAAATATG 59.081 34.615 20.55 15.19 42.22 1.78
35 36 6.698329 CGGCATTCAACATGATGAAAATATGT 59.302 34.615 20.55 2.36 42.22 2.29
36 37 7.861872 CGGCATTCAACATGATGAAAATATGTA 59.138 33.333 20.55 0.00 42.22 2.29
37 38 9.701098 GGCATTCAACATGATGAAAATATGTAT 57.299 29.630 20.55 0.99 42.22 2.29
73 74 7.964604 AAAAGATACTGTAGTTTGAGTGGTC 57.035 36.000 0.00 0.00 0.00 4.02
74 75 6.919775 AAGATACTGTAGTTTGAGTGGTCT 57.080 37.500 0.00 0.00 0.00 3.85
75 76 8.418597 AAAGATACTGTAGTTTGAGTGGTCTA 57.581 34.615 0.00 0.00 0.00 2.59
76 77 8.596781 AAGATACTGTAGTTTGAGTGGTCTAT 57.403 34.615 0.00 0.00 0.00 1.98
77 78 8.596781 AGATACTGTAGTTTGAGTGGTCTATT 57.403 34.615 0.00 0.00 0.00 1.73
78 79 8.688151 AGATACTGTAGTTTGAGTGGTCTATTC 58.312 37.037 0.00 0.00 0.00 1.75
79 80 6.665992 ACTGTAGTTTGAGTGGTCTATTCA 57.334 37.500 0.00 0.00 0.00 2.57
80 81 6.456501 ACTGTAGTTTGAGTGGTCTATTCAC 58.543 40.000 0.00 0.00 35.51 3.18
81 82 5.466819 TGTAGTTTGAGTGGTCTATTCACG 58.533 41.667 0.00 0.00 39.86 4.35
82 83 4.602340 AGTTTGAGTGGTCTATTCACGT 57.398 40.909 0.00 0.00 39.86 4.49
83 84 4.957296 AGTTTGAGTGGTCTATTCACGTT 58.043 39.130 0.00 0.00 39.86 3.99
84 85 6.092955 AGTTTGAGTGGTCTATTCACGTTA 57.907 37.500 0.00 0.00 39.86 3.18
85 86 6.698380 AGTTTGAGTGGTCTATTCACGTTAT 58.302 36.000 0.00 0.00 39.86 1.89
86 87 6.812160 AGTTTGAGTGGTCTATTCACGTTATC 59.188 38.462 0.00 0.00 39.86 1.75
87 88 6.525578 TTGAGTGGTCTATTCACGTTATCT 57.474 37.500 0.00 0.00 39.86 1.98
88 89 6.132791 TGAGTGGTCTATTCACGTTATCTC 57.867 41.667 0.00 0.00 39.86 2.75
89 90 5.650703 TGAGTGGTCTATTCACGTTATCTCA 59.349 40.000 0.00 0.00 39.86 3.27
90 91 5.892568 AGTGGTCTATTCACGTTATCTCAC 58.107 41.667 0.00 0.00 39.86 3.51
91 92 5.652891 AGTGGTCTATTCACGTTATCTCACT 59.347 40.000 0.00 0.00 39.86 3.41
92 93 5.744345 GTGGTCTATTCACGTTATCTCACTG 59.256 44.000 0.00 0.00 0.00 3.66
93 94 5.417894 TGGTCTATTCACGTTATCTCACTGT 59.582 40.000 0.00 0.00 0.00 3.55
94 95 6.600427 TGGTCTATTCACGTTATCTCACTGTA 59.400 38.462 0.00 0.00 0.00 2.74
95 96 7.284716 TGGTCTATTCACGTTATCTCACTGTAT 59.715 37.037 0.00 0.00 0.00 2.29
96 97 8.136165 GGTCTATTCACGTTATCTCACTGTATT 58.864 37.037 0.00 0.00 0.00 1.89
97 98 9.517609 GTCTATTCACGTTATCTCACTGTATTT 57.482 33.333 0.00 0.00 0.00 1.40
98 99 9.731819 TCTATTCACGTTATCTCACTGTATTTC 57.268 33.333 0.00 0.00 0.00 2.17
99 100 7.772332 ATTCACGTTATCTCACTGTATTTCC 57.228 36.000 0.00 0.00 0.00 3.13
100 101 6.525578 TCACGTTATCTCACTGTATTTCCT 57.474 37.500 0.00 0.00 0.00 3.36
101 102 6.931838 TCACGTTATCTCACTGTATTTCCTT 58.068 36.000 0.00 0.00 0.00 3.36
102 103 6.811665 TCACGTTATCTCACTGTATTTCCTTG 59.188 38.462 0.00 0.00 0.00 3.61
103 104 6.036083 CACGTTATCTCACTGTATTTCCTTGG 59.964 42.308 0.00 0.00 0.00 3.61
104 105 6.106673 CGTTATCTCACTGTATTTCCTTGGT 58.893 40.000 0.00 0.00 0.00 3.67
105 106 6.036083 CGTTATCTCACTGTATTTCCTTGGTG 59.964 42.308 0.00 0.00 0.00 4.17
106 107 4.974645 TCTCACTGTATTTCCTTGGTGT 57.025 40.909 0.00 0.00 0.00 4.16
107 108 6.620877 ATCTCACTGTATTTCCTTGGTGTA 57.379 37.500 0.00 0.00 0.00 2.90
108 109 6.620877 TCTCACTGTATTTCCTTGGTGTAT 57.379 37.500 0.00 0.00 0.00 2.29
109 110 7.016153 TCTCACTGTATTTCCTTGGTGTATT 57.984 36.000 0.00 0.00 0.00 1.89
110 111 6.878923 TCTCACTGTATTTCCTTGGTGTATTG 59.121 38.462 0.00 0.00 0.00 1.90
111 112 6.539173 TCACTGTATTTCCTTGGTGTATTGT 58.461 36.000 0.00 0.00 0.00 2.71
112 113 6.429692 TCACTGTATTTCCTTGGTGTATTGTG 59.570 38.462 0.00 0.00 0.00 3.33
113 114 5.183140 ACTGTATTTCCTTGGTGTATTGTGC 59.817 40.000 0.00 0.00 0.00 4.57
114 115 5.321102 TGTATTTCCTTGGTGTATTGTGCT 58.679 37.500 0.00 0.00 0.00 4.40
115 116 4.789012 ATTTCCTTGGTGTATTGTGCTG 57.211 40.909 0.00 0.00 0.00 4.41
116 117 2.949177 TCCTTGGTGTATTGTGCTGT 57.051 45.000 0.00 0.00 0.00 4.40
117 118 4.359434 TTCCTTGGTGTATTGTGCTGTA 57.641 40.909 0.00 0.00 0.00 2.74
118 119 4.568072 TCCTTGGTGTATTGTGCTGTAT 57.432 40.909 0.00 0.00 0.00 2.29
119 120 4.260985 TCCTTGGTGTATTGTGCTGTATG 58.739 43.478 0.00 0.00 0.00 2.39
120 121 3.181497 CCTTGGTGTATTGTGCTGTATGC 60.181 47.826 0.00 0.00 43.25 3.14
135 136 6.158175 GCTGTATGCATCTATTTTCGTAGG 57.842 41.667 0.19 0.00 42.31 3.18
136 137 5.120830 GCTGTATGCATCTATTTTCGTAGGG 59.879 44.000 0.19 0.00 42.31 3.53
137 138 6.413783 TGTATGCATCTATTTTCGTAGGGA 57.586 37.500 0.19 0.00 0.00 4.20
138 139 6.220930 TGTATGCATCTATTTTCGTAGGGAC 58.779 40.000 0.19 0.00 0.00 4.46
153 154 6.091123 CGTAGGGACGTCTTCTTTTTATTG 57.909 41.667 16.46 0.00 44.31 1.90
154 155 5.865552 CGTAGGGACGTCTTCTTTTTATTGA 59.134 40.000 16.46 0.00 44.31 2.57
155 156 6.034683 CGTAGGGACGTCTTCTTTTTATTGAG 59.965 42.308 16.46 0.00 44.31 3.02
156 157 6.110411 AGGGACGTCTTCTTTTTATTGAGA 57.890 37.500 16.46 0.00 0.00 3.27
157 158 6.531021 AGGGACGTCTTCTTTTTATTGAGAA 58.469 36.000 16.46 0.00 0.00 2.87
158 159 6.651225 AGGGACGTCTTCTTTTTATTGAGAAG 59.349 38.462 16.46 6.75 46.47 2.85
159 160 6.427242 GGGACGTCTTCTTTTTATTGAGAAGT 59.573 38.462 16.46 0.00 45.69 3.01
160 161 7.601508 GGGACGTCTTCTTTTTATTGAGAAGTA 59.398 37.037 16.46 0.00 45.69 2.24
161 162 8.648968 GGACGTCTTCTTTTTATTGAGAAGTAG 58.351 37.037 16.46 9.60 45.69 2.57
162 163 8.535690 ACGTCTTCTTTTTATTGAGAAGTAGG 57.464 34.615 11.54 7.75 45.69 3.18
163 164 7.117956 ACGTCTTCTTTTTATTGAGAAGTAGGC 59.882 37.037 11.54 0.00 45.69 3.93
164 165 7.117812 CGTCTTCTTTTTATTGAGAAGTAGGCA 59.882 37.037 11.54 0.00 45.69 4.75
165 166 8.231161 GTCTTCTTTTTATTGAGAAGTAGGCAC 58.769 37.037 11.54 1.24 45.69 5.01
166 167 7.936847 TCTTCTTTTTATTGAGAAGTAGGCACA 59.063 33.333 11.54 0.00 45.69 4.57
167 168 8.635765 TTCTTTTTATTGAGAAGTAGGCACAT 57.364 30.769 0.00 0.00 0.00 3.21
168 169 8.635765 TCTTTTTATTGAGAAGTAGGCACATT 57.364 30.769 0.00 0.00 0.00 2.71
169 170 9.077885 TCTTTTTATTGAGAAGTAGGCACATTT 57.922 29.630 0.00 0.00 0.00 2.32
170 171 9.346725 CTTTTTATTGAGAAGTAGGCACATTTC 57.653 33.333 0.00 0.00 0.00 2.17
171 172 8.635765 TTTTATTGAGAAGTAGGCACATTTCT 57.364 30.769 0.00 0.00 32.87 2.52
172 173 9.733556 TTTTATTGAGAAGTAGGCACATTTCTA 57.266 29.630 0.00 0.00 30.49 2.10
173 174 9.733556 TTTATTGAGAAGTAGGCACATTTCTAA 57.266 29.630 0.00 0.00 30.49 2.10
174 175 9.905713 TTATTGAGAAGTAGGCACATTTCTAAT 57.094 29.630 0.00 0.00 30.49 1.73
175 176 8.814038 ATTGAGAAGTAGGCACATTTCTAATT 57.186 30.769 0.00 0.00 30.49 1.40
176 177 8.635765 TTGAGAAGTAGGCACATTTCTAATTT 57.364 30.769 0.00 0.00 30.49 1.82
177 178 8.268850 TGAGAAGTAGGCACATTTCTAATTTC 57.731 34.615 0.00 0.00 30.49 2.17
178 179 7.882791 TGAGAAGTAGGCACATTTCTAATTTCA 59.117 33.333 0.00 0.00 30.49 2.69
179 180 8.273780 AGAAGTAGGCACATTTCTAATTTCAG 57.726 34.615 0.00 0.00 0.00 3.02
180 181 7.885399 AGAAGTAGGCACATTTCTAATTTCAGT 59.115 33.333 0.00 0.00 0.00 3.41
181 182 7.383102 AGTAGGCACATTTCTAATTTCAGTG 57.617 36.000 0.00 0.00 0.00 3.66
182 183 5.649782 AGGCACATTTCTAATTTCAGTGG 57.350 39.130 0.00 0.00 0.00 4.00
183 184 4.463891 AGGCACATTTCTAATTTCAGTGGG 59.536 41.667 0.00 0.00 0.00 4.61
184 185 4.462483 GGCACATTTCTAATTTCAGTGGGA 59.538 41.667 0.00 0.00 0.00 4.37
185 186 5.127682 GGCACATTTCTAATTTCAGTGGGAT 59.872 40.000 0.00 0.00 0.00 3.85
186 187 6.321181 GGCACATTTCTAATTTCAGTGGGATA 59.679 38.462 0.00 0.00 0.00 2.59
187 188 7.147915 GGCACATTTCTAATTTCAGTGGGATAA 60.148 37.037 0.00 0.00 0.00 1.75
188 189 8.416329 GCACATTTCTAATTTCAGTGGGATAAT 58.584 33.333 0.00 0.00 0.00 1.28
218 219 7.798710 TTATCTAGGTCAATATTCCTCAGGG 57.201 40.000 0.00 0.00 35.51 4.45
219 220 3.904339 TCTAGGTCAATATTCCTCAGGGC 59.096 47.826 0.00 0.00 35.51 5.19
220 221 2.492025 AGGTCAATATTCCTCAGGGCA 58.508 47.619 0.00 0.00 0.00 5.36
221 222 2.441001 AGGTCAATATTCCTCAGGGCAG 59.559 50.000 0.00 0.00 0.00 4.85
222 223 2.225467 GTCAATATTCCTCAGGGCAGC 58.775 52.381 0.00 0.00 0.00 5.25
223 224 2.130193 TCAATATTCCTCAGGGCAGCT 58.870 47.619 0.00 0.00 0.00 4.24
224 225 2.158711 TCAATATTCCTCAGGGCAGCTG 60.159 50.000 10.11 10.11 0.00 4.24
225 226 0.769873 ATATTCCTCAGGGCAGCTGG 59.230 55.000 17.12 0.00 0.00 4.85
226 227 1.987807 TATTCCTCAGGGCAGCTGGC 61.988 60.000 30.97 30.97 43.74 4.85
228 229 4.486503 CCTCAGGGCAGCTGGCTC 62.487 72.222 35.64 25.95 46.29 4.70
238 239 3.695606 GCTGGCTCCGACAGGTGA 61.696 66.667 0.00 0.00 39.45 4.02
239 240 2.575993 CTGGCTCCGACAGGTGAG 59.424 66.667 0.00 0.00 34.53 3.51
242 243 4.803426 GCTCCGACAGGTGAGCGG 62.803 72.222 0.00 0.00 43.94 5.52
243 244 3.374402 CTCCGACAGGTGAGCGGT 61.374 66.667 13.06 0.00 45.02 5.68
244 245 3.343788 CTCCGACAGGTGAGCGGTC 62.344 68.421 7.89 7.89 45.02 4.79
247 248 4.357947 GACAGGTGAGCGGTCGCA 62.358 66.667 27.38 0.71 44.88 5.10
248 249 4.664677 ACAGGTGAGCGGTCGCAC 62.665 66.667 27.38 17.21 44.88 5.34
264 265 2.355481 ACGCCGGTGACTCGTTTC 60.355 61.111 24.59 0.00 34.36 2.78
265 266 3.467119 CGCCGGTGACTCGTTTCG 61.467 66.667 10.20 0.00 0.00 3.46
266 267 2.049802 GCCGGTGACTCGTTTCGA 60.050 61.111 1.90 0.00 0.00 3.71
267 268 1.445582 GCCGGTGACTCGTTTCGAT 60.446 57.895 1.90 0.00 34.61 3.59
268 269 1.683790 GCCGGTGACTCGTTTCGATG 61.684 60.000 1.90 0.00 34.61 3.84
269 270 1.076533 CCGGTGACTCGTTTCGATGG 61.077 60.000 0.00 0.00 34.61 3.51
270 271 1.683790 CGGTGACTCGTTTCGATGGC 61.684 60.000 0.00 0.00 34.61 4.40
271 272 1.683790 GGTGACTCGTTTCGATGGCG 61.684 60.000 0.00 0.00 34.61 5.69
272 273 1.445410 TGACTCGTTTCGATGGCGG 60.445 57.895 0.00 0.00 38.28 6.13
273 274 2.799540 GACTCGTTTCGATGGCGGC 61.800 63.158 0.00 0.00 38.28 6.53
274 275 2.813474 CTCGTTTCGATGGCGGCA 60.813 61.111 16.34 16.34 38.28 5.69
275 276 2.802667 CTCGTTTCGATGGCGGCAG 61.803 63.158 19.29 4.62 38.28 4.85
276 277 3.118454 CGTTTCGATGGCGGCAGT 61.118 61.111 19.29 5.66 38.28 4.40
277 278 2.480555 GTTTCGATGGCGGCAGTG 59.519 61.111 19.29 12.43 38.28 3.66
278 279 2.745884 TTTCGATGGCGGCAGTGG 60.746 61.111 19.29 9.09 38.28 4.00
279 280 3.545124 TTTCGATGGCGGCAGTGGT 62.545 57.895 19.29 0.00 38.28 4.16
280 281 3.950794 TTCGATGGCGGCAGTGGTC 62.951 63.158 19.29 9.12 38.28 4.02
282 283 4.760047 GATGGCGGCAGTGGTCGT 62.760 66.667 19.29 0.00 45.79 4.34
283 284 4.329545 ATGGCGGCAGTGGTCGTT 62.330 61.111 19.29 0.00 45.79 3.85
284 285 4.980805 TGGCGGCAGTGGTCGTTC 62.981 66.667 7.97 0.00 45.79 3.95
287 288 4.657824 CGGCAGTGGTCGTTCGGT 62.658 66.667 0.00 0.00 37.35 4.69
288 289 3.041940 GGCAGTGGTCGTTCGGTG 61.042 66.667 0.00 0.00 0.00 4.94
289 290 3.041940 GCAGTGGTCGTTCGGTGG 61.042 66.667 0.00 0.00 0.00 4.61
290 291 2.420043 CAGTGGTCGTTCGGTGGT 59.580 61.111 0.00 0.00 0.00 4.16
291 292 1.663702 CAGTGGTCGTTCGGTGGTC 60.664 63.158 0.00 0.00 0.00 4.02
292 293 1.831286 AGTGGTCGTTCGGTGGTCT 60.831 57.895 0.00 0.00 0.00 3.85
293 294 1.372623 GTGGTCGTTCGGTGGTCTC 60.373 63.158 0.00 0.00 0.00 3.36
294 295 1.829096 TGGTCGTTCGGTGGTCTCA 60.829 57.895 0.00 0.00 0.00 3.27
295 296 1.080705 GGTCGTTCGGTGGTCTCAG 60.081 63.158 0.00 0.00 0.00 3.35
296 297 1.521450 GGTCGTTCGGTGGTCTCAGA 61.521 60.000 0.00 0.00 0.00 3.27
297 298 0.313043 GTCGTTCGGTGGTCTCAGAA 59.687 55.000 0.00 0.00 0.00 3.02
298 299 1.067776 GTCGTTCGGTGGTCTCAGAAT 60.068 52.381 0.00 0.00 0.00 2.40
299 300 1.616865 TCGTTCGGTGGTCTCAGAATT 59.383 47.619 0.00 0.00 0.00 2.17
300 301 2.036733 TCGTTCGGTGGTCTCAGAATTT 59.963 45.455 0.00 0.00 0.00 1.82
301 302 2.806244 CGTTCGGTGGTCTCAGAATTTT 59.194 45.455 0.00 0.00 0.00 1.82
302 303 3.363970 CGTTCGGTGGTCTCAGAATTTTG 60.364 47.826 0.00 0.00 0.00 2.44
303 304 3.485463 TCGGTGGTCTCAGAATTTTGT 57.515 42.857 0.00 0.00 0.00 2.83
304 305 3.815809 TCGGTGGTCTCAGAATTTTGTT 58.184 40.909 0.00 0.00 0.00 2.83
305 306 3.563808 TCGGTGGTCTCAGAATTTTGTTG 59.436 43.478 0.00 0.00 0.00 3.33
306 307 3.315191 CGGTGGTCTCAGAATTTTGTTGT 59.685 43.478 0.00 0.00 0.00 3.32
307 308 4.513692 CGGTGGTCTCAGAATTTTGTTGTA 59.486 41.667 0.00 0.00 0.00 2.41
308 309 5.008217 CGGTGGTCTCAGAATTTTGTTGTAA 59.992 40.000 0.00 0.00 0.00 2.41
309 310 6.293955 CGGTGGTCTCAGAATTTTGTTGTAAT 60.294 38.462 0.00 0.00 0.00 1.89
310 311 7.433680 GGTGGTCTCAGAATTTTGTTGTAATT 58.566 34.615 0.00 0.00 0.00 1.40
311 312 7.926018 GGTGGTCTCAGAATTTTGTTGTAATTT 59.074 33.333 0.00 0.00 0.00 1.82
312 313 9.313118 GTGGTCTCAGAATTTTGTTGTAATTTT 57.687 29.630 0.00 0.00 0.00 1.82
313 314 9.883142 TGGTCTCAGAATTTTGTTGTAATTTTT 57.117 25.926 0.00 0.00 0.00 1.94
334 335 9.794719 ATTTTTATACTACTTTGATAGGGGAGC 57.205 33.333 0.00 0.00 0.00 4.70
335 336 6.585695 TTATACTACTTTGATAGGGGAGCG 57.414 41.667 0.00 0.00 0.00 5.03
336 337 3.028094 ACTACTTTGATAGGGGAGCGA 57.972 47.619 0.00 0.00 0.00 4.93
337 338 2.959707 ACTACTTTGATAGGGGAGCGAG 59.040 50.000 0.00 0.00 0.00 5.03
338 339 1.123928 ACTTTGATAGGGGAGCGAGG 58.876 55.000 0.00 0.00 0.00 4.63
339 340 0.394565 CTTTGATAGGGGAGCGAGGG 59.605 60.000 0.00 0.00 0.00 4.30
340 341 0.326238 TTTGATAGGGGAGCGAGGGT 60.326 55.000 0.00 0.00 0.00 4.34
341 342 1.048724 TTGATAGGGGAGCGAGGGTG 61.049 60.000 0.00 0.00 0.00 4.61
342 343 2.122813 ATAGGGGAGCGAGGGTGG 60.123 66.667 0.00 0.00 0.00 4.61
343 344 3.776016 ATAGGGGAGCGAGGGTGGG 62.776 68.421 0.00 0.00 0.00 4.61
351 352 4.760047 CGAGGGTGGGGTGCTTCG 62.760 72.222 0.00 0.00 0.00 3.79
352 353 3.637273 GAGGGTGGGGTGCTTCGT 61.637 66.667 0.00 0.00 0.00 3.85
353 354 2.203877 AGGGTGGGGTGCTTCGTA 60.204 61.111 0.00 0.00 0.00 3.43
354 355 2.046604 GGGTGGGGTGCTTCGTAC 60.047 66.667 0.00 0.00 0.00 3.67
355 356 2.590114 GGGTGGGGTGCTTCGTACT 61.590 63.158 0.00 0.00 0.00 2.73
356 357 1.373812 GGTGGGGTGCTTCGTACTT 59.626 57.895 0.00 0.00 0.00 2.24
357 358 0.672711 GGTGGGGTGCTTCGTACTTC 60.673 60.000 0.00 0.00 0.00 3.01
358 359 0.320697 GTGGGGTGCTTCGTACTTCT 59.679 55.000 0.00 0.00 0.00 2.85
359 360 0.320374 TGGGGTGCTTCGTACTTCTG 59.680 55.000 0.00 0.00 0.00 3.02
360 361 0.320697 GGGGTGCTTCGTACTTCTGT 59.679 55.000 0.00 0.00 0.00 3.41
361 362 1.270678 GGGGTGCTTCGTACTTCTGTT 60.271 52.381 0.00 0.00 0.00 3.16
362 363 1.798813 GGGTGCTTCGTACTTCTGTTG 59.201 52.381 0.00 0.00 0.00 3.33
363 364 2.547218 GGGTGCTTCGTACTTCTGTTGA 60.547 50.000 0.00 0.00 0.00 3.18
364 365 3.128349 GGTGCTTCGTACTTCTGTTGAA 58.872 45.455 0.00 0.00 0.00 2.69
365 366 3.746492 GGTGCTTCGTACTTCTGTTGAAT 59.254 43.478 0.00 0.00 0.00 2.57
366 367 4.213482 GGTGCTTCGTACTTCTGTTGAATT 59.787 41.667 0.00 0.00 0.00 2.17
367 368 5.277828 GGTGCTTCGTACTTCTGTTGAATTT 60.278 40.000 0.00 0.00 0.00 1.82
368 369 6.199393 GTGCTTCGTACTTCTGTTGAATTTT 58.801 36.000 0.00 0.00 0.00 1.82
369 370 6.140737 GTGCTTCGTACTTCTGTTGAATTTTG 59.859 38.462 0.00 0.00 0.00 2.44
370 371 6.037720 TGCTTCGTACTTCTGTTGAATTTTGA 59.962 34.615 0.00 0.00 0.00 2.69
371 372 6.910433 GCTTCGTACTTCTGTTGAATTTTGAA 59.090 34.615 0.00 0.00 0.00 2.69
372 373 7.591426 GCTTCGTACTTCTGTTGAATTTTGAAT 59.409 33.333 0.00 0.00 0.00 2.57
431 432 7.593875 TTGAAATATAAAACAAGCATGTGGC 57.406 32.000 0.00 0.00 40.46 5.01
440 441 2.048877 GCATGTGGCTTGTGGTGC 60.049 61.111 0.00 0.00 40.25 5.01
452 453 2.930295 TGGTGCCCACAACCATGA 59.070 55.556 0.00 0.00 29.81 3.07
453 454 1.231355 TGGTGCCCACAACCATGAA 59.769 52.632 0.00 0.00 29.81 2.57
454 455 1.112315 TGGTGCCCACAACCATGAAC 61.112 55.000 0.00 0.00 29.81 3.18
455 456 1.665442 GTGCCCACAACCATGAACC 59.335 57.895 0.00 0.00 0.00 3.62
456 457 0.827507 GTGCCCACAACCATGAACCT 60.828 55.000 0.00 0.00 0.00 3.50
457 458 0.105760 TGCCCACAACCATGAACCTT 60.106 50.000 0.00 0.00 0.00 3.50
458 459 0.318120 GCCCACAACCATGAACCTTG 59.682 55.000 0.00 0.00 0.00 3.61
459 460 0.968405 CCCACAACCATGAACCTTGG 59.032 55.000 0.00 0.00 40.26 3.61
460 461 0.968405 CCACAACCATGAACCTTGGG 59.032 55.000 0.00 0.00 38.64 4.12
461 462 1.703411 CACAACCATGAACCTTGGGT 58.297 50.000 0.00 0.00 38.64 4.51
462 463 1.613437 CACAACCATGAACCTTGGGTC 59.387 52.381 0.00 0.00 38.64 4.46
463 464 1.256812 CAACCATGAACCTTGGGTCC 58.743 55.000 1.86 0.00 38.64 4.46
464 465 0.251165 AACCATGAACCTTGGGTCCG 60.251 55.000 1.86 0.00 38.64 4.79
465 466 1.378514 CCATGAACCTTGGGTCCGG 60.379 63.158 0.00 0.00 33.12 5.14
466 467 2.046285 CATGAACCTTGGGTCCGGC 61.046 63.158 0.00 0.00 33.12 6.13
467 468 2.231380 ATGAACCTTGGGTCCGGCT 61.231 57.895 0.00 0.00 33.12 5.52
468 469 1.789576 ATGAACCTTGGGTCCGGCTT 61.790 55.000 0.00 0.00 33.12 4.35
469 470 1.128809 TGAACCTTGGGTCCGGCTTA 61.129 55.000 0.00 0.00 33.12 3.09
470 471 0.255033 GAACCTTGGGTCCGGCTTAT 59.745 55.000 0.00 0.00 33.12 1.73
471 472 0.034477 AACCTTGGGTCCGGCTTATG 60.034 55.000 0.00 0.00 33.12 1.90
472 473 0.912487 ACCTTGGGTCCGGCTTATGA 60.912 55.000 0.00 0.00 0.00 2.15
473 474 0.474184 CCTTGGGTCCGGCTTATGAT 59.526 55.000 0.00 0.00 0.00 2.45
474 475 1.133792 CCTTGGGTCCGGCTTATGATT 60.134 52.381 0.00 0.00 0.00 2.57
475 476 2.105821 CCTTGGGTCCGGCTTATGATTA 59.894 50.000 0.00 0.00 0.00 1.75
476 477 3.244911 CCTTGGGTCCGGCTTATGATTAT 60.245 47.826 0.00 0.00 0.00 1.28
477 478 3.417069 TGGGTCCGGCTTATGATTATG 57.583 47.619 0.00 0.00 0.00 1.90
478 479 2.084546 GGGTCCGGCTTATGATTATGC 58.915 52.381 0.00 0.00 0.00 3.14
479 480 2.552155 GGGTCCGGCTTATGATTATGCA 60.552 50.000 0.00 0.00 31.74 3.96
480 481 3.347216 GGTCCGGCTTATGATTATGCAT 58.653 45.455 3.79 3.79 31.74 3.96
481 482 3.758554 GGTCCGGCTTATGATTATGCATT 59.241 43.478 3.54 0.00 31.74 3.56
482 483 4.142600 GGTCCGGCTTATGATTATGCATTC 60.143 45.833 3.54 0.00 31.74 2.67
483 484 4.455533 GTCCGGCTTATGATTATGCATTCA 59.544 41.667 3.54 3.58 31.74 2.57
484 485 4.696877 TCCGGCTTATGATTATGCATTCAG 59.303 41.667 3.54 0.00 31.74 3.02
485 486 4.456911 CCGGCTTATGATTATGCATTCAGT 59.543 41.667 3.54 0.00 31.74 3.41
486 487 5.048504 CCGGCTTATGATTATGCATTCAGTT 60.049 40.000 3.54 0.00 31.74 3.16
487 488 6.441274 CGGCTTATGATTATGCATTCAGTTT 58.559 36.000 3.54 0.00 31.74 2.66
488 489 6.919662 CGGCTTATGATTATGCATTCAGTTTT 59.080 34.615 3.54 0.00 31.74 2.43
489 490 7.436080 CGGCTTATGATTATGCATTCAGTTTTT 59.564 33.333 3.54 0.00 31.74 1.94
522 523 9.953565 TTGTAAAATAGCATGTAAAGTAGGAGT 57.046 29.630 0.00 0.00 0.00 3.85
529 530 7.349412 AGCATGTAAAGTAGGAGTAGTTAGG 57.651 40.000 0.00 0.00 0.00 2.69
530 531 7.124052 AGCATGTAAAGTAGGAGTAGTTAGGA 58.876 38.462 0.00 0.00 0.00 2.94
531 532 7.618512 AGCATGTAAAGTAGGAGTAGTTAGGAA 59.381 37.037 0.00 0.00 0.00 3.36
532 533 7.921745 GCATGTAAAGTAGGAGTAGTTAGGAAG 59.078 40.741 0.00 0.00 0.00 3.46
533 534 7.951347 TGTAAAGTAGGAGTAGTTAGGAAGG 57.049 40.000 0.00 0.00 0.00 3.46
534 535 7.473593 TGTAAAGTAGGAGTAGTTAGGAAGGT 58.526 38.462 0.00 0.00 0.00 3.50
535 536 7.952368 TGTAAAGTAGGAGTAGTTAGGAAGGTT 59.048 37.037 0.00 0.00 0.00 3.50
536 537 7.479352 AAAGTAGGAGTAGTTAGGAAGGTTC 57.521 40.000 0.00 0.00 0.00 3.62
537 538 6.150034 AGTAGGAGTAGTTAGGAAGGTTCA 57.850 41.667 0.00 0.00 0.00 3.18
538 539 6.743788 AGTAGGAGTAGTTAGGAAGGTTCAT 58.256 40.000 0.00 0.00 0.00 2.57
539 540 7.880623 AGTAGGAGTAGTTAGGAAGGTTCATA 58.119 38.462 0.00 0.00 0.00 2.15
540 541 8.342270 AGTAGGAGTAGTTAGGAAGGTTCATAA 58.658 37.037 0.00 0.00 31.81 1.90
541 542 8.975295 GTAGGAGTAGTTAGGAAGGTTCATAAA 58.025 37.037 0.00 0.00 35.54 1.40
542 543 8.445361 AGGAGTAGTTAGGAAGGTTCATAAAA 57.555 34.615 0.00 0.00 35.54 1.52
543 544 8.319881 AGGAGTAGTTAGGAAGGTTCATAAAAC 58.680 37.037 0.00 1.92 35.54 2.43
544 545 8.319881 GGAGTAGTTAGGAAGGTTCATAAAACT 58.680 37.037 10.71 10.71 35.54 2.66
582 583 1.967779 GGGCTTTGCTTTAGGAAACCA 59.032 47.619 13.14 0.00 32.57 3.67
587 588 3.306472 TTGCTTTAGGAAACCAGGTGT 57.694 42.857 0.00 0.00 0.00 4.16
609 610 4.514585 ACTGTGCCCCCGTGCAAA 62.515 61.111 0.00 0.00 44.11 3.68
610 611 3.673484 CTGTGCCCCCGTGCAAAG 61.673 66.667 0.00 0.00 44.11 2.77
625 636 4.612614 CGTGCAAAGCTGTACACTTAATTG 59.387 41.667 5.71 7.25 37.99 2.32
646 658 8.532977 AATTGTGTTATTTGACCAAAGCATAC 57.467 30.769 1.57 0.62 33.32 2.39
650 662 5.703592 TGTTATTTGACCAAAGCATACGACT 59.296 36.000 0.00 0.00 33.32 4.18
664 676 0.670546 ACGACTCCCGCATGAAAGTG 60.671 55.000 0.00 0.00 43.32 3.16
677 689 4.624015 CATGAAAGTGTGAAATTGGCACT 58.376 39.130 11.57 8.14 44.31 4.40
681 693 7.517614 TGAAAGTGTGAAATTGGCACTATTA 57.482 32.000 11.57 0.83 41.94 0.98
729 769 2.545946 GAGACACTCAAAACCAGCACTC 59.454 50.000 0.00 0.00 0.00 3.51
731 771 1.064758 ACACTCAAAACCAGCACTCCA 60.065 47.619 0.00 0.00 0.00 3.86
732 772 2.233271 CACTCAAAACCAGCACTCCAT 58.767 47.619 0.00 0.00 0.00 3.41
733 773 2.624838 CACTCAAAACCAGCACTCCATT 59.375 45.455 0.00 0.00 0.00 3.16
734 774 3.068590 CACTCAAAACCAGCACTCCATTT 59.931 43.478 0.00 0.00 0.00 2.32
735 775 3.068590 ACTCAAAACCAGCACTCCATTTG 59.931 43.478 0.00 0.00 0.00 2.32
736 776 2.137523 CAAAACCAGCACTCCATTTGC 58.862 47.619 0.00 0.00 40.52 3.68
755 802 3.515330 GCTAGGTGCAGCAATGAATTT 57.485 42.857 19.63 0.00 41.40 1.82
779 826 0.107703 TGGACCTAGCAATTCCGCAG 60.108 55.000 0.00 0.00 31.38 5.18
781 828 0.462759 GACCTAGCAATTCCGCAGCT 60.463 55.000 0.00 0.00 42.14 4.24
789 838 0.329596 AATTCCGCAGCTTTCCCTCT 59.670 50.000 0.00 0.00 0.00 3.69
790 839 0.329596 ATTCCGCAGCTTTCCCTCTT 59.670 50.000 0.00 0.00 0.00 2.85
799 855 1.897560 CTTTCCCTCTTCACACACCC 58.102 55.000 0.00 0.00 0.00 4.61
806 862 2.575532 CTCTTCACACACCCACAACAT 58.424 47.619 0.00 0.00 0.00 2.71
807 863 2.951642 CTCTTCACACACCCACAACATT 59.048 45.455 0.00 0.00 0.00 2.71
809 865 4.133820 TCTTCACACACCCACAACATTAG 58.866 43.478 0.00 0.00 0.00 1.73
810 866 3.569194 TCACACACCCACAACATTAGT 57.431 42.857 0.00 0.00 0.00 2.24
811 867 4.691326 TCACACACCCACAACATTAGTA 57.309 40.909 0.00 0.00 0.00 1.82
812 868 4.637276 TCACACACCCACAACATTAGTAG 58.363 43.478 0.00 0.00 0.00 2.57
813 869 4.101898 TCACACACCCACAACATTAGTAGT 59.898 41.667 0.00 0.00 0.00 2.73
814 870 5.304871 TCACACACCCACAACATTAGTAGTA 59.695 40.000 0.00 0.00 0.00 1.82
815 871 5.407387 CACACACCCACAACATTAGTAGTAC 59.593 44.000 0.00 0.00 0.00 2.73
816 872 5.070714 ACACACCCACAACATTAGTAGTACA 59.929 40.000 2.52 0.00 0.00 2.90
817 873 5.637810 CACACCCACAACATTAGTAGTACAG 59.362 44.000 2.52 0.00 0.00 2.74
818 874 5.306160 ACACCCACAACATTAGTAGTACAGT 59.694 40.000 2.52 0.00 0.00 3.55
819 875 5.637810 CACCCACAACATTAGTAGTACAGTG 59.362 44.000 2.52 0.96 0.00 3.66
827 883 9.343103 CAACATTAGTAGTACAGTGTACTCAAG 57.657 37.037 33.69 21.45 31.79 3.02
853 931 3.945304 AAACGGCCGTCATCGACCC 62.945 63.158 34.29 0.00 36.25 4.46
856 934 3.782443 GGCCGTCATCGACCCCTT 61.782 66.667 0.00 0.00 39.71 3.95
860 938 1.437986 CGTCATCGACCCCTTCCTC 59.562 63.158 0.00 0.00 39.71 3.71
863 941 0.397254 TCATCGACCCCTTCCTCCTC 60.397 60.000 0.00 0.00 0.00 3.71
865 943 2.930777 ATCGACCCCTTCCTCCTCCG 62.931 65.000 0.00 0.00 0.00 4.63
868 946 0.325016 GACCCCTTCCTCCTCCGTAA 60.325 60.000 0.00 0.00 0.00 3.18
869 947 0.325390 ACCCCTTCCTCCTCCGTAAG 60.325 60.000 0.00 0.00 0.00 2.34
888 967 2.926165 AGTCCGTATATAAACGCGCTC 58.074 47.619 5.73 0.00 41.51 5.03
903 982 2.030562 CTCCACTCCGCACCGTTT 59.969 61.111 0.00 0.00 0.00 3.60
917 996 2.355115 GTTTGCCGGACCTCCCAT 59.645 61.111 5.05 0.00 34.14 4.00
947 1026 3.426615 TCCAATTGTCCCATAAAGCGTT 58.573 40.909 4.43 0.00 0.00 4.84
951 1033 2.851263 TGTCCCATAAAGCGTTCAGT 57.149 45.000 0.00 0.00 0.00 3.41
962 1044 2.943978 CGTTCAGTTCCCCTCCGCT 61.944 63.158 0.00 0.00 0.00 5.52
988 1070 1.086067 ATCATCAGCGCCACTCAACG 61.086 55.000 2.29 0.00 0.00 4.10
990 1072 3.240134 ATCAGCGCCACTCAACGGT 62.240 57.895 2.29 0.00 41.28 4.83
1051 1139 1.007600 TCCTGCTCCTCTTCCTGATCA 59.992 52.381 0.00 0.00 0.00 2.92
1101 1189 2.750350 CAGAACCAGAACCCGCCT 59.250 61.111 0.00 0.00 0.00 5.52
1428 1599 4.838486 GACGAGACGCTCCGCCTG 62.838 72.222 0.00 0.00 0.00 4.85
1527 2173 3.782443 GCCAACCTCGTCCCCGAT 61.782 66.667 0.00 0.00 43.27 4.18
2201 2930 1.571215 CGTGTTTAGTTGACCGGGGC 61.571 60.000 6.32 0.00 0.00 5.80
2202 2931 1.073548 TGTTTAGTTGACCGGGGCC 59.926 57.895 6.32 0.00 0.00 5.80
2203 2932 2.036571 GTTTAGTTGACCGGGGCCG 61.037 63.158 6.32 0.00 39.44 6.13
2204 2933 2.518709 TTTAGTTGACCGGGGCCGT 61.519 57.895 6.32 0.00 37.81 5.68
2205 2934 2.453379 TTTAGTTGACCGGGGCCGTC 62.453 60.000 6.32 0.23 37.81 4.79
2307 3054 0.615331 TCTCTGCTTGGTGGTGGATC 59.385 55.000 0.00 0.00 0.00 3.36
2315 3062 3.057526 GCTTGGTGGTGGATCTTTTGTAC 60.058 47.826 0.00 0.00 0.00 2.90
2316 3063 2.773487 TGGTGGTGGATCTTTTGTACG 58.227 47.619 0.00 0.00 0.00 3.67
2317 3064 2.105134 TGGTGGTGGATCTTTTGTACGT 59.895 45.455 0.00 0.00 0.00 3.57
2318 3065 3.324268 TGGTGGTGGATCTTTTGTACGTA 59.676 43.478 0.00 0.00 0.00 3.57
2344 3100 9.889128 AGGTCATTCATTTTTCTTTTCTTCAAA 57.111 25.926 0.00 0.00 0.00 2.69
2372 3128 8.600449 AACATGTACATAAAAATGGTGTTTGG 57.400 30.769 8.32 0.00 0.00 3.28
2375 3131 9.698309 CATGTACATAAAAATGGTGTTTGGTTA 57.302 29.630 8.32 0.00 0.00 2.85
2383 3144 5.482163 AATGGTGTTTGGTTAATCAAGGG 57.518 39.130 0.66 0.00 0.00 3.95
2498 5039 1.280133 TGGTGCCATCTTCTTCCAGAG 59.720 52.381 0.00 0.00 0.00 3.35
2585 5303 5.742453 GTGCATTTCAGAATCATGTGACATC 59.258 40.000 0.00 0.00 0.00 3.06
2588 5306 6.419771 CATTTCAGAATCATGTGACATCGAG 58.580 40.000 0.00 0.00 0.00 4.04
2755 6695 4.122776 GCGACTGATCAGTGGTTTATCAT 58.877 43.478 32.50 3.81 42.66 2.45
2759 6703 5.678583 ACTGATCAGTGGTTTATCATCAGG 58.321 41.667 27.37 0.00 40.99 3.86
2776 6720 3.264574 GGCCTATGAAGTGCCAACA 57.735 52.632 0.00 0.00 44.70 3.33
2909 6860 4.616802 CGACATATGGTGTTTGCTTGAAAC 59.383 41.667 7.80 0.00 42.36 2.78
2966 6917 9.778741 TTGAGTGTCTAGATAAACAAACAATCT 57.221 29.630 0.00 0.00 34.05 2.40
2967 6918 9.778741 TGAGTGTCTAGATAAACAAACAATCTT 57.221 29.630 0.00 0.00 34.05 2.40
2980 6931 9.463443 AAACAAACAATCTTACTAAAGCACATC 57.537 29.630 0.00 0.00 32.36 3.06
2981 6932 8.396272 ACAAACAATCTTACTAAAGCACATCT 57.604 30.769 0.00 0.00 32.36 2.90
2982 6933 9.502091 ACAAACAATCTTACTAAAGCACATCTA 57.498 29.630 0.00 0.00 32.36 1.98
2983 6934 9.979270 CAAACAATCTTACTAAAGCACATCTAG 57.021 33.333 0.00 0.00 32.36 2.43
2984 6935 9.944376 AAACAATCTTACTAAAGCACATCTAGA 57.056 29.630 0.00 0.00 32.36 2.43
2986 6937 9.539825 ACAATCTTACTAAAGCACATCTAGATG 57.460 33.333 27.63 27.63 37.45 2.90
3001 6952 6.895898 CATCTAGATGTGTCATAACCATTGC 58.104 40.000 22.42 0.00 34.23 3.56
3002 6953 5.988287 TCTAGATGTGTCATAACCATTGCA 58.012 37.500 0.00 0.00 0.00 4.08
3003 6954 4.970662 AGATGTGTCATAACCATTGCAC 57.029 40.909 0.00 0.00 0.00 4.57
3004 6955 4.334552 AGATGTGTCATAACCATTGCACA 58.665 39.130 0.00 0.00 40.42 4.57
3005 6956 4.951715 AGATGTGTCATAACCATTGCACAT 59.048 37.500 7.56 7.56 46.19 3.21
3006 6957 4.700268 TGTGTCATAACCATTGCACATC 57.300 40.909 0.00 0.00 32.79 3.06
3007 6958 4.334552 TGTGTCATAACCATTGCACATCT 58.665 39.130 0.00 0.00 32.79 2.90
3008 6959 5.495640 TGTGTCATAACCATTGCACATCTA 58.504 37.500 0.00 0.00 32.79 1.98
3009 6960 5.942826 TGTGTCATAACCATTGCACATCTAA 59.057 36.000 0.00 0.00 32.79 2.10
3010 6961 6.602803 TGTGTCATAACCATTGCACATCTAAT 59.397 34.615 0.00 0.00 32.79 1.73
3011 6962 7.122501 TGTGTCATAACCATTGCACATCTAATT 59.877 33.333 0.00 0.00 32.79 1.40
3012 6963 7.975616 GTGTCATAACCATTGCACATCTAATTT 59.024 33.333 0.00 0.00 0.00 1.82
3013 6964 8.530311 TGTCATAACCATTGCACATCTAATTTT 58.470 29.630 0.00 0.00 0.00 1.82
3018 6969 8.931385 AACCATTGCACATCTAATTTTATGTC 57.069 30.769 0.00 1.27 34.12 3.06
3019 6970 8.065473 ACCATTGCACATCTAATTTTATGTCA 57.935 30.769 0.00 3.21 34.12 3.58
3020 6971 8.698210 ACCATTGCACATCTAATTTTATGTCAT 58.302 29.630 0.00 0.00 34.12 3.06
3021 6972 9.537192 CCATTGCACATCTAATTTTATGTCATT 57.463 29.630 0.00 1.16 34.12 2.57
3041 6992 8.609176 TGTCATTAATTTTACGTGGAGATAAGC 58.391 33.333 0.00 0.00 0.00 3.09
3042 6993 7.792508 GTCATTAATTTTACGTGGAGATAAGCG 59.207 37.037 0.00 0.00 0.00 4.68
3043 6994 7.493320 TCATTAATTTTACGTGGAGATAAGCGT 59.507 33.333 0.00 0.00 40.76 5.07
3044 6995 5.464965 AATTTTACGTGGAGATAAGCGTG 57.535 39.130 0.00 0.00 38.10 5.34
3045 6996 3.853831 TTTACGTGGAGATAAGCGTGA 57.146 42.857 0.00 0.00 38.10 4.35
3046 6997 4.380841 TTTACGTGGAGATAAGCGTGAT 57.619 40.909 0.00 0.00 38.10 3.06
3047 6998 2.961526 ACGTGGAGATAAGCGTGATT 57.038 45.000 0.00 0.00 36.16 2.57
3048 6999 2.540515 ACGTGGAGATAAGCGTGATTG 58.459 47.619 0.00 0.00 36.16 2.67
3049 7000 2.165641 ACGTGGAGATAAGCGTGATTGA 59.834 45.455 0.00 0.00 36.16 2.57
3050 7001 3.186909 CGTGGAGATAAGCGTGATTGAA 58.813 45.455 0.00 0.00 0.00 2.69
3051 7002 3.804325 CGTGGAGATAAGCGTGATTGAAT 59.196 43.478 0.00 0.00 0.00 2.57
3052 7003 4.982295 CGTGGAGATAAGCGTGATTGAATA 59.018 41.667 0.00 0.00 0.00 1.75
3053 7004 5.107837 CGTGGAGATAAGCGTGATTGAATAC 60.108 44.000 0.00 0.00 0.00 1.89
3054 7005 5.753438 GTGGAGATAAGCGTGATTGAATACA 59.247 40.000 0.00 0.00 0.00 2.29
3055 7006 6.257849 GTGGAGATAAGCGTGATTGAATACAA 59.742 38.462 0.00 0.00 40.42 2.41
3056 7007 6.479990 TGGAGATAAGCGTGATTGAATACAAG 59.520 38.462 0.00 0.00 39.46 3.16
3057 7008 6.073548 GGAGATAAGCGTGATTGAATACAAGG 60.074 42.308 0.00 0.00 39.46 3.61
3058 7009 6.582636 AGATAAGCGTGATTGAATACAAGGA 58.417 36.000 0.00 0.00 39.46 3.36
3059 7010 7.220030 AGATAAGCGTGATTGAATACAAGGAT 58.780 34.615 0.00 0.00 39.46 3.24
3060 7011 5.741388 AAGCGTGATTGAATACAAGGATC 57.259 39.130 0.00 0.00 39.46 3.36
3061 7012 5.028549 AGCGTGATTGAATACAAGGATCT 57.971 39.130 0.00 0.00 39.46 2.75
3062 7013 4.813161 AGCGTGATTGAATACAAGGATCTG 59.187 41.667 0.00 0.00 39.46 2.90
3063 7014 4.811024 GCGTGATTGAATACAAGGATCTGA 59.189 41.667 0.00 0.00 39.46 3.27
3064 7015 5.277058 GCGTGATTGAATACAAGGATCTGAC 60.277 44.000 0.00 0.00 39.46 3.51
3065 7016 5.051441 CGTGATTGAATACAAGGATCTGACG 60.051 44.000 0.00 0.00 39.46 4.35
3066 7017 4.811024 TGATTGAATACAAGGATCTGACGC 59.189 41.667 0.00 0.00 39.46 5.19
3067 7018 3.179443 TGAATACAAGGATCTGACGCC 57.821 47.619 0.00 0.00 0.00 5.68
3068 7019 2.128035 GAATACAAGGATCTGACGCCG 58.872 52.381 0.00 0.00 0.00 6.46
3069 7020 0.389391 ATACAAGGATCTGACGCCGG 59.611 55.000 0.00 0.00 0.00 6.13
3070 7021 1.672854 TACAAGGATCTGACGCCGGG 61.673 60.000 2.18 0.00 0.00 5.73
3071 7022 2.363795 AAGGATCTGACGCCGGGA 60.364 61.111 2.18 0.00 0.00 5.14
3072 7023 1.762460 AAGGATCTGACGCCGGGAT 60.762 57.895 2.18 0.00 0.00 3.85
3073 7024 2.029666 GGATCTGACGCCGGGATG 59.970 66.667 2.18 0.00 0.00 3.51
3074 7025 2.498941 GGATCTGACGCCGGGATGA 61.499 63.158 2.18 0.00 0.00 2.92
3075 7026 1.300233 GATCTGACGCCGGGATGAC 60.300 63.158 2.18 0.00 0.00 3.06
3076 7027 3.138930 ATCTGACGCCGGGATGACG 62.139 63.158 2.18 0.00 0.00 4.35
3085 7036 2.202756 GGGATGACGCGAGGTGTC 60.203 66.667 15.93 0.00 42.60 3.67
3095 7046 3.681835 GAGGTGTCGACGGTGGCT 61.682 66.667 11.62 0.00 0.00 4.75
3096 7047 3.916392 GAGGTGTCGACGGTGGCTG 62.916 68.421 11.62 0.00 0.00 4.85
3097 7048 4.295119 GGTGTCGACGGTGGCTGT 62.295 66.667 11.62 0.00 0.00 4.40
3098 7049 2.646719 GTGTCGACGGTGGCTGTA 59.353 61.111 11.62 0.00 0.00 2.74
3099 7050 1.443872 GTGTCGACGGTGGCTGTAG 60.444 63.158 11.62 0.00 0.00 2.74
3100 7051 2.181021 GTCGACGGTGGCTGTAGG 59.819 66.667 0.00 0.00 0.00 3.18
3101 7052 3.066190 TCGACGGTGGCTGTAGGG 61.066 66.667 0.00 0.00 0.00 3.53
3102 7053 3.379445 CGACGGTGGCTGTAGGGT 61.379 66.667 0.00 0.00 0.00 4.34
3103 7054 2.577593 GACGGTGGCTGTAGGGTC 59.422 66.667 0.00 0.00 0.00 4.46
3104 7055 3.352338 GACGGTGGCTGTAGGGTCG 62.352 68.421 0.00 0.00 0.00 4.79
3105 7056 3.379445 CGGTGGCTGTAGGGTCGT 61.379 66.667 0.00 0.00 0.00 4.34
3106 7057 2.939261 CGGTGGCTGTAGGGTCGTT 61.939 63.158 0.00 0.00 0.00 3.85
3107 7058 1.079336 GGTGGCTGTAGGGTCGTTC 60.079 63.158 0.00 0.00 0.00 3.95
3108 7059 1.079336 GTGGCTGTAGGGTCGTTCC 60.079 63.158 0.00 0.00 0.00 3.62
3109 7060 2.183555 GGCTGTAGGGTCGTTCCG 59.816 66.667 0.00 0.00 37.00 4.30
3110 7061 2.508663 GCTGTAGGGTCGTTCCGC 60.509 66.667 0.00 0.00 37.00 5.54
3111 7062 3.003113 GCTGTAGGGTCGTTCCGCT 62.003 63.158 0.00 0.00 37.00 5.52
3112 7063 1.153823 CTGTAGGGTCGTTCCGCTG 60.154 63.158 0.00 0.00 37.00 5.18
3113 7064 2.508663 GTAGGGTCGTTCCGCTGC 60.509 66.667 0.00 0.00 37.00 5.25
3114 7065 4.124351 TAGGGTCGTTCCGCTGCG 62.124 66.667 16.34 16.34 37.00 5.18
3118 7069 4.505217 GTCGTTCCGCTGCGCATG 62.505 66.667 18.00 6.69 0.00 4.06
3120 7071 4.799473 CGTTCCGCTGCGCATGTG 62.799 66.667 18.00 11.95 0.00 3.21
3121 7072 4.465512 GTTCCGCTGCGCATGTGG 62.466 66.667 24.58 24.58 36.49 4.17
3145 7096 3.512516 GGCGATGTGCTGGCCTTC 61.513 66.667 3.32 0.00 44.85 3.46
3146 7097 3.869272 GCGATGTGCTGGCCTTCG 61.869 66.667 3.32 4.44 41.73 3.79
3147 7098 3.197790 CGATGTGCTGGCCTTCGG 61.198 66.667 3.32 0.00 0.00 4.30
3175 7126 3.320078 CCGAACGGCGATGCTACG 61.320 66.667 16.62 9.30 44.57 3.51
3176 7127 2.578713 CGAACGGCGATGCTACGT 60.579 61.111 16.62 0.00 44.57 3.57
3179 7130 4.272100 ACGGCGATGCTACGTTTT 57.728 50.000 16.62 0.00 37.61 2.43
3180 7131 2.535588 ACGGCGATGCTACGTTTTT 58.464 47.368 16.62 0.00 37.61 1.94
3181 7132 0.441145 ACGGCGATGCTACGTTTTTC 59.559 50.000 16.62 0.00 37.61 2.29
3182 7133 0.583083 CGGCGATGCTACGTTTTTCG 60.583 55.000 0.00 0.00 46.00 3.46
3183 7134 0.247537 GGCGATGCTACGTTTTTCGG 60.248 55.000 0.00 0.00 44.69 4.30
3184 7135 0.441145 GCGATGCTACGTTTTTCGGT 59.559 50.000 0.00 0.00 44.69 4.69
3185 7136 1.136169 GCGATGCTACGTTTTTCGGTT 60.136 47.619 0.00 0.00 44.69 4.44
3186 7137 2.492001 CGATGCTACGTTTTTCGGTTG 58.508 47.619 0.00 0.00 44.69 3.77
3187 7138 2.723618 CGATGCTACGTTTTTCGGTTGG 60.724 50.000 0.00 0.00 44.69 3.77
3188 7139 1.666054 TGCTACGTTTTTCGGTTGGT 58.334 45.000 0.00 0.00 44.69 3.67
3189 7140 1.331138 TGCTACGTTTTTCGGTTGGTG 59.669 47.619 0.00 0.00 44.69 4.17
3190 7141 1.334329 GCTACGTTTTTCGGTTGGTGG 60.334 52.381 0.00 0.00 44.69 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.327924 TTGAATGCCGATCCTGGTGT 59.672 50.000 0.00 0.00 0.00 4.16
1 2 0.734889 GTTGAATGCCGATCCTGGTG 59.265 55.000 0.00 0.00 0.00 4.17
2 3 0.327924 TGTTGAATGCCGATCCTGGT 59.672 50.000 0.00 0.00 0.00 4.00
3 4 1.335810 CATGTTGAATGCCGATCCTGG 59.664 52.381 0.00 0.00 0.00 4.45
4 5 2.291365 TCATGTTGAATGCCGATCCTG 58.709 47.619 0.00 0.00 0.00 3.86
5 6 2.715749 TCATGTTGAATGCCGATCCT 57.284 45.000 0.00 0.00 0.00 3.24
6 7 2.880268 TCATCATGTTGAATGCCGATCC 59.120 45.455 3.94 0.00 0.00 3.36
7 8 4.556942 TTCATCATGTTGAATGCCGATC 57.443 40.909 13.94 0.00 30.82 3.69
8 9 4.987408 TTTCATCATGTTGAATGCCGAT 57.013 36.364 17.66 0.00 35.64 4.18
9 10 4.780275 TTTTCATCATGTTGAATGCCGA 57.220 36.364 17.66 2.60 35.64 5.54
10 11 6.698329 ACATATTTTCATCATGTTGAATGCCG 59.302 34.615 17.66 9.69 35.64 5.69
11 12 9.701098 ATACATATTTTCATCATGTTGAATGCC 57.299 29.630 17.66 0.00 35.64 4.40
48 49 8.211629 AGACCACTCAAACTACAGTATCTTTTT 58.788 33.333 0.00 0.00 0.00 1.94
49 50 7.736893 AGACCACTCAAACTACAGTATCTTTT 58.263 34.615 0.00 0.00 0.00 2.27
50 51 7.304497 AGACCACTCAAACTACAGTATCTTT 57.696 36.000 0.00 0.00 0.00 2.52
51 52 6.919775 AGACCACTCAAACTACAGTATCTT 57.080 37.500 0.00 0.00 0.00 2.40
52 53 8.596781 AATAGACCACTCAAACTACAGTATCT 57.403 34.615 0.00 0.00 0.00 1.98
53 54 8.467598 TGAATAGACCACTCAAACTACAGTATC 58.532 37.037 0.00 0.00 0.00 2.24
54 55 8.251721 GTGAATAGACCACTCAAACTACAGTAT 58.748 37.037 0.00 0.00 0.00 2.12
55 56 7.574404 CGTGAATAGACCACTCAAACTACAGTA 60.574 40.741 0.00 0.00 32.64 2.74
56 57 6.456501 GTGAATAGACCACTCAAACTACAGT 58.543 40.000 0.00 0.00 0.00 3.55
57 58 5.573282 CGTGAATAGACCACTCAAACTACAG 59.427 44.000 0.00 0.00 32.64 2.74
58 59 5.010314 ACGTGAATAGACCACTCAAACTACA 59.990 40.000 0.00 0.00 32.64 2.74
59 60 5.467705 ACGTGAATAGACCACTCAAACTAC 58.532 41.667 0.00 0.00 32.64 2.73
60 61 5.717078 ACGTGAATAGACCACTCAAACTA 57.283 39.130 0.00 0.00 32.64 2.24
61 62 4.602340 ACGTGAATAGACCACTCAAACT 57.398 40.909 0.00 0.00 32.64 2.66
62 63 6.812160 AGATAACGTGAATAGACCACTCAAAC 59.188 38.462 0.00 0.00 32.64 2.93
63 64 6.931838 AGATAACGTGAATAGACCACTCAAA 58.068 36.000 0.00 0.00 32.64 2.69
64 65 6.152154 TGAGATAACGTGAATAGACCACTCAA 59.848 38.462 0.00 0.00 32.64 3.02
65 66 5.650703 TGAGATAACGTGAATAGACCACTCA 59.349 40.000 0.00 0.00 32.64 3.41
66 67 5.972382 GTGAGATAACGTGAATAGACCACTC 59.028 44.000 0.00 0.00 32.64 3.51
67 68 5.652891 AGTGAGATAACGTGAATAGACCACT 59.347 40.000 0.00 0.00 32.64 4.00
68 69 5.744345 CAGTGAGATAACGTGAATAGACCAC 59.256 44.000 0.00 0.00 0.00 4.16
69 70 5.417894 ACAGTGAGATAACGTGAATAGACCA 59.582 40.000 0.00 0.00 0.00 4.02
70 71 5.892568 ACAGTGAGATAACGTGAATAGACC 58.107 41.667 0.00 0.00 0.00 3.85
71 72 9.517609 AAATACAGTGAGATAACGTGAATAGAC 57.482 33.333 0.00 0.00 0.00 2.59
72 73 9.731819 GAAATACAGTGAGATAACGTGAATAGA 57.268 33.333 0.00 0.00 0.00 1.98
73 74 8.969267 GGAAATACAGTGAGATAACGTGAATAG 58.031 37.037 0.00 0.00 0.00 1.73
74 75 8.692710 AGGAAATACAGTGAGATAACGTGAATA 58.307 33.333 0.00 0.00 0.00 1.75
75 76 7.556844 AGGAAATACAGTGAGATAACGTGAAT 58.443 34.615 0.00 0.00 0.00 2.57
76 77 6.931838 AGGAAATACAGTGAGATAACGTGAA 58.068 36.000 0.00 0.00 0.00 3.18
77 78 6.525578 AGGAAATACAGTGAGATAACGTGA 57.474 37.500 0.00 0.00 0.00 4.35
78 79 6.036083 CCAAGGAAATACAGTGAGATAACGTG 59.964 42.308 0.00 0.00 0.00 4.49
79 80 6.106673 CCAAGGAAATACAGTGAGATAACGT 58.893 40.000 0.00 0.00 0.00 3.99
80 81 6.036083 CACCAAGGAAATACAGTGAGATAACG 59.964 42.308 0.00 0.00 0.00 3.18
81 82 6.879458 ACACCAAGGAAATACAGTGAGATAAC 59.121 38.462 0.00 0.00 0.00 1.89
82 83 7.016153 ACACCAAGGAAATACAGTGAGATAA 57.984 36.000 0.00 0.00 0.00 1.75
83 84 6.620877 ACACCAAGGAAATACAGTGAGATA 57.379 37.500 0.00 0.00 0.00 1.98
84 85 5.505181 ACACCAAGGAAATACAGTGAGAT 57.495 39.130 0.00 0.00 0.00 2.75
85 86 4.974645 ACACCAAGGAAATACAGTGAGA 57.025 40.909 0.00 0.00 0.00 3.27
86 87 6.655003 ACAATACACCAAGGAAATACAGTGAG 59.345 38.462 0.00 0.00 0.00 3.51
87 88 6.429692 CACAATACACCAAGGAAATACAGTGA 59.570 38.462 0.00 0.00 0.00 3.41
88 89 6.611381 CACAATACACCAAGGAAATACAGTG 58.389 40.000 0.00 0.00 0.00 3.66
89 90 5.183140 GCACAATACACCAAGGAAATACAGT 59.817 40.000 0.00 0.00 0.00 3.55
90 91 5.415701 AGCACAATACACCAAGGAAATACAG 59.584 40.000 0.00 0.00 0.00 2.74
91 92 5.182950 CAGCACAATACACCAAGGAAATACA 59.817 40.000 0.00 0.00 0.00 2.29
92 93 5.183140 ACAGCACAATACACCAAGGAAATAC 59.817 40.000 0.00 0.00 0.00 1.89
93 94 5.321102 ACAGCACAATACACCAAGGAAATA 58.679 37.500 0.00 0.00 0.00 1.40
94 95 4.151883 ACAGCACAATACACCAAGGAAAT 58.848 39.130 0.00 0.00 0.00 2.17
95 96 3.561143 ACAGCACAATACACCAAGGAAA 58.439 40.909 0.00 0.00 0.00 3.13
96 97 3.222173 ACAGCACAATACACCAAGGAA 57.778 42.857 0.00 0.00 0.00 3.36
97 98 2.949177 ACAGCACAATACACCAAGGA 57.051 45.000 0.00 0.00 0.00 3.36
98 99 3.181497 GCATACAGCACAATACACCAAGG 60.181 47.826 0.00 0.00 44.79 3.61
99 100 4.019919 GCATACAGCACAATACACCAAG 57.980 45.455 0.00 0.00 44.79 3.61
112 113 5.120830 CCCTACGAAAATAGATGCATACAGC 59.879 44.000 0.00 0.00 45.96 4.40
113 114 6.366332 GTCCCTACGAAAATAGATGCATACAG 59.634 42.308 0.00 0.00 0.00 2.74
114 115 6.220930 GTCCCTACGAAAATAGATGCATACA 58.779 40.000 0.00 0.00 0.00 2.29
115 116 6.707599 GTCCCTACGAAAATAGATGCATAC 57.292 41.667 0.00 0.00 0.00 2.39
131 132 7.095270 TCTCAATAAAAAGAAGACGTCCCTAC 58.905 38.462 13.01 1.32 0.00 3.18
132 133 7.235935 TCTCAATAAAAAGAAGACGTCCCTA 57.764 36.000 13.01 0.00 0.00 3.53
133 134 6.110411 TCTCAATAAAAAGAAGACGTCCCT 57.890 37.500 13.01 7.12 0.00 4.20
134 135 6.796705 TTCTCAATAAAAAGAAGACGTCCC 57.203 37.500 13.01 4.56 0.00 4.46
142 143 8.635765 ATGTGCCTACTTCTCAATAAAAAGAA 57.364 30.769 0.00 0.00 0.00 2.52
143 144 8.635765 AATGTGCCTACTTCTCAATAAAAAGA 57.364 30.769 0.00 0.00 0.00 2.52
144 145 9.346725 GAAATGTGCCTACTTCTCAATAAAAAG 57.653 33.333 0.00 0.00 0.00 2.27
145 146 9.077885 AGAAATGTGCCTACTTCTCAATAAAAA 57.922 29.630 0.00 0.00 0.00 1.94
146 147 8.635765 AGAAATGTGCCTACTTCTCAATAAAA 57.364 30.769 0.00 0.00 0.00 1.52
147 148 9.733556 TTAGAAATGTGCCTACTTCTCAATAAA 57.266 29.630 0.00 0.00 0.00 1.40
148 149 9.905713 ATTAGAAATGTGCCTACTTCTCAATAA 57.094 29.630 0.00 0.00 0.00 1.40
149 150 9.905713 AATTAGAAATGTGCCTACTTCTCAATA 57.094 29.630 0.00 0.00 0.00 1.90
150 151 8.814038 AATTAGAAATGTGCCTACTTCTCAAT 57.186 30.769 0.00 0.00 0.00 2.57
151 152 8.635765 AAATTAGAAATGTGCCTACTTCTCAA 57.364 30.769 0.00 0.00 0.00 3.02
152 153 7.882791 TGAAATTAGAAATGTGCCTACTTCTCA 59.117 33.333 0.00 0.00 0.00 3.27
153 154 8.268850 TGAAATTAGAAATGTGCCTACTTCTC 57.731 34.615 0.00 0.00 0.00 2.87
154 155 7.885399 ACTGAAATTAGAAATGTGCCTACTTCT 59.115 33.333 0.00 0.00 0.00 2.85
155 156 7.965107 CACTGAAATTAGAAATGTGCCTACTTC 59.035 37.037 0.00 0.00 0.00 3.01
156 157 7.094205 CCACTGAAATTAGAAATGTGCCTACTT 60.094 37.037 0.00 0.00 0.00 2.24
157 158 6.375455 CCACTGAAATTAGAAATGTGCCTACT 59.625 38.462 0.00 0.00 0.00 2.57
158 159 6.404734 CCCACTGAAATTAGAAATGTGCCTAC 60.405 42.308 0.00 0.00 0.00 3.18
159 160 5.652014 CCCACTGAAATTAGAAATGTGCCTA 59.348 40.000 0.00 0.00 0.00 3.93
160 161 4.463891 CCCACTGAAATTAGAAATGTGCCT 59.536 41.667 0.00 0.00 0.00 4.75
161 162 4.462483 TCCCACTGAAATTAGAAATGTGCC 59.538 41.667 0.00 0.00 0.00 5.01
162 163 5.643379 TCCCACTGAAATTAGAAATGTGC 57.357 39.130 0.00 0.00 0.00 4.57
192 193 9.494055 CCCTGAGGAATATTGACCTAGATAATA 57.506 37.037 0.00 0.00 36.57 0.98
193 194 7.092668 GCCCTGAGGAATATTGACCTAGATAAT 60.093 40.741 0.00 0.00 36.57 1.28
194 195 6.213600 GCCCTGAGGAATATTGACCTAGATAA 59.786 42.308 0.00 0.00 36.57 1.75
195 196 5.721960 GCCCTGAGGAATATTGACCTAGATA 59.278 44.000 0.00 0.00 36.57 1.98
196 197 4.534103 GCCCTGAGGAATATTGACCTAGAT 59.466 45.833 0.00 0.00 36.57 1.98
197 198 3.904339 GCCCTGAGGAATATTGACCTAGA 59.096 47.826 0.00 0.00 36.57 2.43
198 199 3.648067 TGCCCTGAGGAATATTGACCTAG 59.352 47.826 0.00 0.00 36.57 3.02
199 200 3.648067 CTGCCCTGAGGAATATTGACCTA 59.352 47.826 0.00 0.00 36.57 3.08
200 201 2.441001 CTGCCCTGAGGAATATTGACCT 59.559 50.000 0.00 0.00 39.41 3.85
201 202 2.856222 CTGCCCTGAGGAATATTGACC 58.144 52.381 0.00 0.00 33.47 4.02
202 203 2.158696 AGCTGCCCTGAGGAATATTGAC 60.159 50.000 0.00 0.00 33.47 3.18
203 204 2.130193 AGCTGCCCTGAGGAATATTGA 58.870 47.619 0.00 0.00 33.47 2.57
204 205 2.228059 CAGCTGCCCTGAGGAATATTG 58.772 52.381 0.00 0.00 44.64 1.90
205 206 1.144503 CCAGCTGCCCTGAGGAATATT 59.855 52.381 8.66 0.00 44.64 1.28
206 207 0.769873 CCAGCTGCCCTGAGGAATAT 59.230 55.000 8.66 0.00 44.64 1.28
207 208 1.987807 GCCAGCTGCCCTGAGGAATA 61.988 60.000 8.66 0.00 44.64 1.75
208 209 3.004951 CCAGCTGCCCTGAGGAAT 58.995 61.111 8.66 0.00 44.64 3.01
209 210 4.039092 GCCAGCTGCCCTGAGGAA 62.039 66.667 8.66 0.00 44.64 3.36
211 212 4.486503 GAGCCAGCTGCCCTGAGG 62.487 72.222 8.66 0.00 44.64 3.86
212 213 4.486503 GGAGCCAGCTGCCCTGAG 62.487 72.222 8.66 0.00 44.64 3.35
219 220 3.699894 ACCTGTCGGAGCCAGCTG 61.700 66.667 6.78 6.78 0.00 4.24
220 221 3.699894 CACCTGTCGGAGCCAGCT 61.700 66.667 0.00 0.00 0.00 4.24
221 222 3.655810 CTCACCTGTCGGAGCCAGC 62.656 68.421 0.00 0.00 0.00 4.85
222 223 2.575993 CTCACCTGTCGGAGCCAG 59.424 66.667 0.00 0.00 0.00 4.85
226 227 3.343788 GACCGCTCACCTGTCGGAG 62.344 68.421 6.91 0.00 45.53 4.63
227 228 3.371063 GACCGCTCACCTGTCGGA 61.371 66.667 6.91 0.00 45.53 4.55
228 229 4.778415 CGACCGCTCACCTGTCGG 62.778 72.222 3.52 0.00 45.93 4.79
230 231 4.357947 TGCGACCGCTCACCTGTC 62.358 66.667 15.61 0.00 42.51 3.51
231 232 4.664677 GTGCGACCGCTCACCTGT 62.665 66.667 15.61 0.00 42.51 4.00
246 247 2.654912 GAAACGAGTCACCGGCGTG 61.655 63.158 6.01 4.55 41.72 5.34
247 248 2.355481 GAAACGAGTCACCGGCGT 60.355 61.111 6.01 0.00 40.35 5.68
248 249 3.467119 CGAAACGAGTCACCGGCG 61.467 66.667 0.00 0.00 0.00 6.46
249 250 1.445582 ATCGAAACGAGTCACCGGC 60.446 57.895 0.00 0.00 39.91 6.13
250 251 1.076533 CCATCGAAACGAGTCACCGG 61.077 60.000 0.00 0.00 39.91 5.28
251 252 1.683790 GCCATCGAAACGAGTCACCG 61.684 60.000 0.00 0.00 39.91 4.94
252 253 1.683790 CGCCATCGAAACGAGTCACC 61.684 60.000 0.00 0.00 39.91 4.02
253 254 1.683790 CCGCCATCGAAACGAGTCAC 61.684 60.000 6.66 0.00 39.91 3.67
254 255 1.445410 CCGCCATCGAAACGAGTCA 60.445 57.895 6.66 0.00 39.91 3.41
255 256 2.799540 GCCGCCATCGAAACGAGTC 61.800 63.158 6.66 0.00 39.91 3.36
256 257 2.813908 GCCGCCATCGAAACGAGT 60.814 61.111 6.66 0.00 39.91 4.18
257 258 2.802667 CTGCCGCCATCGAAACGAG 61.803 63.158 6.66 0.00 39.91 4.18
258 259 2.813474 CTGCCGCCATCGAAACGA 60.813 61.111 6.66 0.00 41.13 3.85
259 260 3.118454 ACTGCCGCCATCGAAACG 61.118 61.111 0.00 0.00 38.10 3.60
260 261 2.480555 CACTGCCGCCATCGAAAC 59.519 61.111 0.00 0.00 38.10 2.78
261 262 2.745884 CCACTGCCGCCATCGAAA 60.746 61.111 0.00 0.00 38.10 3.46
262 263 3.950794 GACCACTGCCGCCATCGAA 62.951 63.158 0.00 0.00 38.10 3.71
263 264 4.451150 GACCACTGCCGCCATCGA 62.451 66.667 0.00 0.00 38.10 3.59
265 266 4.760047 ACGACCACTGCCGCCATC 62.760 66.667 0.00 0.00 0.00 3.51
266 267 4.329545 AACGACCACTGCCGCCAT 62.330 61.111 0.00 0.00 0.00 4.40
267 268 4.980805 GAACGACCACTGCCGCCA 62.981 66.667 0.00 0.00 0.00 5.69
270 271 4.657824 ACCGAACGACCACTGCCG 62.658 66.667 0.00 0.00 0.00 5.69
271 272 3.041940 CACCGAACGACCACTGCC 61.042 66.667 0.00 0.00 0.00 4.85
272 273 3.041940 CCACCGAACGACCACTGC 61.042 66.667 0.00 0.00 0.00 4.40
273 274 1.663702 GACCACCGAACGACCACTG 60.664 63.158 0.00 0.00 0.00 3.66
274 275 1.803366 GAGACCACCGAACGACCACT 61.803 60.000 0.00 0.00 0.00 4.00
275 276 1.372623 GAGACCACCGAACGACCAC 60.373 63.158 0.00 0.00 0.00 4.16
276 277 1.802337 CTGAGACCACCGAACGACCA 61.802 60.000 0.00 0.00 0.00 4.02
277 278 1.080705 CTGAGACCACCGAACGACC 60.081 63.158 0.00 0.00 0.00 4.79
278 279 0.313043 TTCTGAGACCACCGAACGAC 59.687 55.000 0.00 0.00 0.00 4.34
279 280 1.254026 ATTCTGAGACCACCGAACGA 58.746 50.000 0.00 0.00 0.00 3.85
280 281 2.080286 AATTCTGAGACCACCGAACG 57.920 50.000 0.00 0.00 0.00 3.95
281 282 3.564225 ACAAAATTCTGAGACCACCGAAC 59.436 43.478 0.00 0.00 0.00 3.95
282 283 3.815809 ACAAAATTCTGAGACCACCGAA 58.184 40.909 0.00 0.00 0.00 4.30
283 284 3.485463 ACAAAATTCTGAGACCACCGA 57.515 42.857 0.00 0.00 0.00 4.69
284 285 3.315191 ACAACAAAATTCTGAGACCACCG 59.685 43.478 0.00 0.00 0.00 4.94
285 286 4.918810 ACAACAAAATTCTGAGACCACC 57.081 40.909 0.00 0.00 0.00 4.61
286 287 8.871686 AAATTACAACAAAATTCTGAGACCAC 57.128 30.769 0.00 0.00 0.00 4.16
287 288 9.883142 AAAAATTACAACAAAATTCTGAGACCA 57.117 25.926 0.00 0.00 0.00 4.02
308 309 9.794719 GCTCCCCTATCAAAGTAGTATAAAAAT 57.205 33.333 0.00 0.00 0.00 1.82
309 310 7.929785 CGCTCCCCTATCAAAGTAGTATAAAAA 59.070 37.037 0.00 0.00 0.00 1.94
310 311 7.288389 TCGCTCCCCTATCAAAGTAGTATAAAA 59.712 37.037 0.00 0.00 0.00 1.52
311 312 6.779049 TCGCTCCCCTATCAAAGTAGTATAAA 59.221 38.462 0.00 0.00 0.00 1.40
312 313 6.309357 TCGCTCCCCTATCAAAGTAGTATAA 58.691 40.000 0.00 0.00 0.00 0.98
313 314 5.884322 TCGCTCCCCTATCAAAGTAGTATA 58.116 41.667 0.00 0.00 0.00 1.47
314 315 4.737578 TCGCTCCCCTATCAAAGTAGTAT 58.262 43.478 0.00 0.00 0.00 2.12
315 316 4.142790 CTCGCTCCCCTATCAAAGTAGTA 58.857 47.826 0.00 0.00 0.00 1.82
316 317 2.959707 CTCGCTCCCCTATCAAAGTAGT 59.040 50.000 0.00 0.00 0.00 2.73
317 318 2.297597 CCTCGCTCCCCTATCAAAGTAG 59.702 54.545 0.00 0.00 0.00 2.57
318 319 2.317040 CCTCGCTCCCCTATCAAAGTA 58.683 52.381 0.00 0.00 0.00 2.24
319 320 1.123928 CCTCGCTCCCCTATCAAAGT 58.876 55.000 0.00 0.00 0.00 2.66
320 321 0.394565 CCCTCGCTCCCCTATCAAAG 59.605 60.000 0.00 0.00 0.00 2.77
321 322 0.326238 ACCCTCGCTCCCCTATCAAA 60.326 55.000 0.00 0.00 0.00 2.69
322 323 1.048724 CACCCTCGCTCCCCTATCAA 61.049 60.000 0.00 0.00 0.00 2.57
323 324 1.457643 CACCCTCGCTCCCCTATCA 60.458 63.158 0.00 0.00 0.00 2.15
324 325 2.210711 CCACCCTCGCTCCCCTATC 61.211 68.421 0.00 0.00 0.00 2.08
325 326 2.122813 CCACCCTCGCTCCCCTAT 60.123 66.667 0.00 0.00 0.00 2.57
326 327 4.475444 CCCACCCTCGCTCCCCTA 62.475 72.222 0.00 0.00 0.00 3.53
334 335 4.760047 CGAAGCACCCCACCCTCG 62.760 72.222 0.00 0.00 0.00 4.63
335 336 2.288025 TACGAAGCACCCCACCCTC 61.288 63.158 0.00 0.00 0.00 4.30
336 337 2.203877 TACGAAGCACCCCACCCT 60.204 61.111 0.00 0.00 0.00 4.34
337 338 2.046604 GTACGAAGCACCCCACCC 60.047 66.667 0.00 0.00 0.00 4.61
338 339 0.672711 GAAGTACGAAGCACCCCACC 60.673 60.000 0.00 0.00 0.00 4.61
339 340 0.320697 AGAAGTACGAAGCACCCCAC 59.679 55.000 0.00 0.00 0.00 4.61
340 341 0.320374 CAGAAGTACGAAGCACCCCA 59.680 55.000 0.00 0.00 0.00 4.96
341 342 0.320697 ACAGAAGTACGAAGCACCCC 59.679 55.000 0.00 0.00 0.00 4.95
342 343 1.798813 CAACAGAAGTACGAAGCACCC 59.201 52.381 0.00 0.00 0.00 4.61
343 344 2.750948 TCAACAGAAGTACGAAGCACC 58.249 47.619 0.00 0.00 0.00 5.01
344 345 4.992381 ATTCAACAGAAGTACGAAGCAC 57.008 40.909 0.00 0.00 0.00 4.40
345 346 6.037720 TCAAAATTCAACAGAAGTACGAAGCA 59.962 34.615 0.00 0.00 0.00 3.91
346 347 6.427150 TCAAAATTCAACAGAAGTACGAAGC 58.573 36.000 0.00 0.00 0.00 3.86
405 406 9.311916 GCCACATGCTTGTTTTATATTTCAATA 57.688 29.630 1.83 0.00 36.87 1.90
406 407 8.200364 GCCACATGCTTGTTTTATATTTCAAT 57.800 30.769 1.83 0.00 36.87 2.57
407 408 7.593875 GCCACATGCTTGTTTTATATTTCAA 57.406 32.000 1.83 0.00 36.87 2.69
423 424 2.048877 GCACCACAAGCCACATGC 60.049 61.111 0.00 0.00 41.71 4.06
437 438 0.827507 AGGTTCATGGTTGTGGGCAC 60.828 55.000 0.00 0.00 0.00 5.01
438 439 0.105760 AAGGTTCATGGTTGTGGGCA 60.106 50.000 0.00 0.00 0.00 5.36
439 440 0.318120 CAAGGTTCATGGTTGTGGGC 59.682 55.000 0.00 0.00 0.00 5.36
440 441 0.968405 CCAAGGTTCATGGTTGTGGG 59.032 55.000 0.00 0.00 33.08 4.61
441 442 0.968405 CCCAAGGTTCATGGTTGTGG 59.032 55.000 0.00 0.00 36.14 4.17
442 443 1.613437 GACCCAAGGTTCATGGTTGTG 59.387 52.381 0.00 0.00 35.25 3.33
443 444 1.480498 GGACCCAAGGTTCATGGTTGT 60.480 52.381 0.00 0.00 35.25 3.32
444 445 1.256812 GGACCCAAGGTTCATGGTTG 58.743 55.000 0.00 0.00 35.25 3.77
445 446 0.251165 CGGACCCAAGGTTCATGGTT 60.251 55.000 0.00 0.00 35.25 3.67
446 447 1.378762 CGGACCCAAGGTTCATGGT 59.621 57.895 0.00 0.00 35.25 3.55
447 448 1.378514 CCGGACCCAAGGTTCATGG 60.379 63.158 0.00 0.00 35.25 3.66
448 449 2.046285 GCCGGACCCAAGGTTCATG 61.046 63.158 5.05 0.00 35.25 3.07
449 450 1.789576 AAGCCGGACCCAAGGTTCAT 61.790 55.000 5.05 0.00 35.25 2.57
450 451 1.128809 TAAGCCGGACCCAAGGTTCA 61.129 55.000 5.05 0.00 35.25 3.18
451 452 0.255033 ATAAGCCGGACCCAAGGTTC 59.745 55.000 5.05 0.00 35.25 3.62
452 453 0.034477 CATAAGCCGGACCCAAGGTT 60.034 55.000 5.05 0.00 35.25 3.50
453 454 0.912487 TCATAAGCCGGACCCAAGGT 60.912 55.000 5.05 0.00 39.44 3.50
454 455 0.474184 ATCATAAGCCGGACCCAAGG 59.526 55.000 5.05 0.00 0.00 3.61
455 456 2.348411 AATCATAAGCCGGACCCAAG 57.652 50.000 5.05 0.00 0.00 3.61
456 457 3.750371 CATAATCATAAGCCGGACCCAA 58.250 45.455 5.05 0.00 0.00 4.12
457 458 2.552155 GCATAATCATAAGCCGGACCCA 60.552 50.000 5.05 0.00 0.00 4.51
458 459 2.084546 GCATAATCATAAGCCGGACCC 58.915 52.381 5.05 0.00 0.00 4.46
459 460 2.778299 TGCATAATCATAAGCCGGACC 58.222 47.619 5.05 0.00 0.00 4.46
460 461 4.455533 TGAATGCATAATCATAAGCCGGAC 59.544 41.667 5.05 0.00 0.00 4.79
461 462 4.650734 TGAATGCATAATCATAAGCCGGA 58.349 39.130 5.05 0.00 0.00 5.14
462 463 4.456911 ACTGAATGCATAATCATAAGCCGG 59.543 41.667 0.00 0.00 0.00 6.13
463 464 5.618056 ACTGAATGCATAATCATAAGCCG 57.382 39.130 0.00 0.00 0.00 5.52
464 465 8.652810 AAAAACTGAATGCATAATCATAAGCC 57.347 30.769 0.00 0.00 0.00 4.35
496 497 9.953565 ACTCCTACTTTACATGCTATTTTACAA 57.046 29.630 0.00 0.00 0.00 2.41
503 504 9.080097 CCTAACTACTCCTACTTTACATGCTAT 57.920 37.037 0.00 0.00 0.00 2.97
504 505 8.277197 TCCTAACTACTCCTACTTTACATGCTA 58.723 37.037 0.00 0.00 0.00 3.49
505 506 7.124052 TCCTAACTACTCCTACTTTACATGCT 58.876 38.462 0.00 0.00 0.00 3.79
506 507 7.344095 TCCTAACTACTCCTACTTTACATGC 57.656 40.000 0.00 0.00 0.00 4.06
507 508 8.414778 CCTTCCTAACTACTCCTACTTTACATG 58.585 40.741 0.00 0.00 0.00 3.21
508 509 8.121185 ACCTTCCTAACTACTCCTACTTTACAT 58.879 37.037 0.00 0.00 0.00 2.29
509 510 7.473593 ACCTTCCTAACTACTCCTACTTTACA 58.526 38.462 0.00 0.00 0.00 2.41
510 511 7.953005 ACCTTCCTAACTACTCCTACTTTAC 57.047 40.000 0.00 0.00 0.00 2.01
511 512 8.172741 TGAACCTTCCTAACTACTCCTACTTTA 58.827 37.037 0.00 0.00 0.00 1.85
512 513 7.015064 TGAACCTTCCTAACTACTCCTACTTT 58.985 38.462 0.00 0.00 0.00 2.66
513 514 6.559429 TGAACCTTCCTAACTACTCCTACTT 58.441 40.000 0.00 0.00 0.00 2.24
514 515 6.150034 TGAACCTTCCTAACTACTCCTACT 57.850 41.667 0.00 0.00 0.00 2.57
515 516 8.530804 TTATGAACCTTCCTAACTACTCCTAC 57.469 38.462 0.00 0.00 0.00 3.18
516 517 9.551339 TTTTATGAACCTTCCTAACTACTCCTA 57.449 33.333 0.00 0.00 0.00 2.94
517 518 8.319881 GTTTTATGAACCTTCCTAACTACTCCT 58.680 37.037 0.00 0.00 0.00 3.69
518 519 8.319881 AGTTTTATGAACCTTCCTAACTACTCC 58.680 37.037 0.00 0.00 0.00 3.85
539 540 8.092068 GCCCATGTTTGTAACCTTATTAGTTTT 58.908 33.333 0.00 0.00 0.00 2.43
540 541 7.453439 AGCCCATGTTTGTAACCTTATTAGTTT 59.547 33.333 0.00 0.00 0.00 2.66
541 542 6.951778 AGCCCATGTTTGTAACCTTATTAGTT 59.048 34.615 0.00 0.00 0.00 2.24
542 543 6.490492 AGCCCATGTTTGTAACCTTATTAGT 58.510 36.000 0.00 0.00 0.00 2.24
543 544 7.404671 AAGCCCATGTTTGTAACCTTATTAG 57.595 36.000 0.00 0.00 0.00 1.73
544 545 7.607250 CAAAGCCCATGTTTGTAACCTTATTA 58.393 34.615 0.00 0.00 31.44 0.98
545 546 6.463360 CAAAGCCCATGTTTGTAACCTTATT 58.537 36.000 0.00 0.00 31.44 1.40
546 547 5.568624 GCAAAGCCCATGTTTGTAACCTTAT 60.569 40.000 8.54 0.00 37.25 1.73
547 548 4.262249 GCAAAGCCCATGTTTGTAACCTTA 60.262 41.667 8.54 0.00 37.25 2.69
548 549 3.494223 GCAAAGCCCATGTTTGTAACCTT 60.494 43.478 8.54 0.00 37.25 3.50
549 550 2.037121 GCAAAGCCCATGTTTGTAACCT 59.963 45.455 8.54 0.00 37.25 3.50
550 551 2.037121 AGCAAAGCCCATGTTTGTAACC 59.963 45.455 8.54 0.00 37.25 2.85
551 552 3.385193 AGCAAAGCCCATGTTTGTAAC 57.615 42.857 8.54 0.00 37.25 2.50
552 553 4.414337 AAAGCAAAGCCCATGTTTGTAA 57.586 36.364 8.54 0.00 37.25 2.41
553 554 4.021544 CCTAAAGCAAAGCCCATGTTTGTA 60.022 41.667 8.54 0.00 37.25 2.41
582 583 2.510906 GGCACAGTGACCACACCT 59.489 61.111 4.15 0.00 46.99 4.00
625 636 5.793457 GTCGTATGCTTTGGTCAAATAACAC 59.207 40.000 0.00 0.00 0.00 3.32
629 640 4.873827 GGAGTCGTATGCTTTGGTCAAATA 59.126 41.667 0.00 0.00 0.00 1.40
646 658 0.670546 ACACTTTCATGCGGGAGTCG 60.671 55.000 0.00 0.00 42.76 4.18
650 662 1.974265 TTTCACACTTTCATGCGGGA 58.026 45.000 0.00 0.00 0.00 5.14
687 724 7.602644 TGTCTCTGCATCTTTTTACGAGTATTT 59.397 33.333 0.00 0.00 0.00 1.40
690 727 5.862323 GTGTCTCTGCATCTTTTTACGAGTA 59.138 40.000 0.00 0.00 0.00 2.59
702 739 3.141398 TGGTTTTGAGTGTCTCTGCATC 58.859 45.455 0.00 0.00 0.00 3.91
704 741 2.564771 CTGGTTTTGAGTGTCTCTGCA 58.435 47.619 0.00 0.00 0.00 4.41
735 775 3.184541 CAAATTCATTGCTGCACCTAGC 58.815 45.455 0.00 0.00 43.95 3.42
755 802 0.392461 GAATTGCTAGGTCCACCGCA 60.392 55.000 0.00 0.00 42.08 5.69
779 826 1.239347 GGTGTGTGAAGAGGGAAAGC 58.761 55.000 0.00 0.00 0.00 3.51
781 828 1.133915 GTGGGTGTGTGAAGAGGGAAA 60.134 52.381 0.00 0.00 0.00 3.13
789 838 3.892284 ACTAATGTTGTGGGTGTGTGAA 58.108 40.909 0.00 0.00 0.00 3.18
790 839 3.569194 ACTAATGTTGTGGGTGTGTGA 57.431 42.857 0.00 0.00 0.00 3.58
799 855 8.294577 TGAGTACACTGTACTACTAATGTTGTG 58.705 37.037 19.77 0.00 34.32 3.33
849 927 0.325016 TTACGGAGGAGGAAGGGGTC 60.325 60.000 0.00 0.00 0.00 4.46
853 931 1.112950 GGACTTACGGAGGAGGAAGG 58.887 60.000 0.00 0.00 0.00 3.46
856 934 0.911769 TACGGACTTACGGAGGAGGA 59.088 55.000 0.00 0.00 38.39 3.71
860 938 5.385617 CGTTTATATACGGACTTACGGAGG 58.614 45.833 7.73 0.00 37.86 4.30
863 941 3.599514 CGCGTTTATATACGGACTTACGG 59.400 47.826 15.92 0.00 41.65 4.02
865 943 4.222114 AGCGCGTTTATATACGGACTTAC 58.778 43.478 15.92 0.00 41.65 2.34
868 946 2.351157 GGAGCGCGTTTATATACGGACT 60.351 50.000 15.92 8.47 41.65 3.85
869 947 1.981533 GGAGCGCGTTTATATACGGAC 59.018 52.381 15.92 1.54 41.65 4.79
888 967 4.025401 GCAAACGGTGCGGAGTGG 62.025 66.667 0.00 0.00 45.10 4.00
903 982 2.227757 TGAAATGGGAGGTCCGGCA 61.228 57.895 0.00 0.00 38.76 5.69
917 996 3.636679 TGGGACAATTGGAGTTGTGAAA 58.363 40.909 10.83 0.00 42.08 2.69
947 1026 2.856039 ATCGAGCGGAGGGGAACTGA 62.856 60.000 0.00 0.00 0.00 3.41
951 1033 2.978298 ATCGATCGAGCGGAGGGGAA 62.978 60.000 24.18 1.41 0.00 3.97
962 1044 1.081175 GGCGCTGATGATCGATCGA 60.081 57.895 21.86 21.86 33.17 3.59
988 1070 0.896226 GGCCCCATCGATCTACTACC 59.104 60.000 0.00 0.00 0.00 3.18
990 1072 0.611062 CCGGCCCCATCGATCTACTA 60.611 60.000 0.00 0.00 0.00 1.82
1033 1121 2.807472 GCATGATCAGGAAGAGGAGCAG 60.807 54.545 12.39 0.00 32.40 4.24
1042 1130 1.227350 CGGCGAGCATGATCAGGAA 60.227 57.895 12.39 0.00 0.00 3.36
1128 1216 1.308069 CCATGGACGGGCTGAAGTTG 61.308 60.000 5.56 0.00 0.00 3.16
1428 1599 4.666253 TGGGAGCACTTGGGCAGC 62.666 66.667 0.00 0.00 35.83 5.25
1593 2269 1.077787 TGGTAATTCCTGCGGCTGG 60.078 57.895 18.81 18.81 37.07 4.85
2307 3054 9.113876 GAAAAATGAATGACCTACGTACAAAAG 57.886 33.333 0.00 0.00 0.00 2.27
2315 3062 9.118236 GAAGAAAAGAAAAATGAATGACCTACG 57.882 33.333 0.00 0.00 0.00 3.51
2316 3063 9.965824 TGAAGAAAAGAAAAATGAATGACCTAC 57.034 29.630 0.00 0.00 0.00 3.18
2318 3065 9.889128 TTTGAAGAAAAGAAAAATGAATGACCT 57.111 25.926 0.00 0.00 0.00 3.85
2362 3118 4.746466 TCCCTTGATTAACCAAACACCAT 58.254 39.130 0.00 0.00 0.00 3.55
2363 3119 4.141135 TCTCCCTTGATTAACCAAACACCA 60.141 41.667 0.00 0.00 0.00 4.17
2364 3120 4.403734 TCTCCCTTGATTAACCAAACACC 58.596 43.478 0.00 0.00 0.00 4.16
2365 3121 7.881775 ATATCTCCCTTGATTAACCAAACAC 57.118 36.000 0.00 0.00 0.00 3.32
2451 3213 5.010112 TGCCGAAACCAGATAAAATTGACAA 59.990 36.000 0.00 0.00 0.00 3.18
2484 5025 6.122277 AGTCTACTCTCTCTGGAAGAAGATG 58.878 44.000 0.00 0.00 46.34 2.90
2487 5028 6.538742 CACTAGTCTACTCTCTCTGGAAGAAG 59.461 46.154 0.00 0.00 46.34 2.85
2494 5035 4.881273 ACATGCACTAGTCTACTCTCTCTG 59.119 45.833 0.00 0.00 0.00 3.35
2498 5039 3.872182 TCGACATGCACTAGTCTACTCTC 59.128 47.826 12.27 0.00 32.68 3.20
2567 5285 5.329035 TCTCGATGTCACATGATTCTGAA 57.671 39.130 0.00 0.00 0.00 3.02
2569 5287 5.346522 TCTTCTCGATGTCACATGATTCTG 58.653 41.667 0.00 0.00 0.00 3.02
2585 5303 1.171308 TAGTCCACCGGTTCTTCTCG 58.829 55.000 2.97 0.00 0.00 4.04
2588 5306 2.902523 GGATTAGTCCACCGGTTCTTC 58.097 52.381 2.97 0.00 44.42 2.87
2759 6703 2.159198 CCAATGTTGGCACTTCATAGGC 60.159 50.000 0.00 0.00 42.21 3.93
2821 6767 1.532298 CCAAACCCAAACGTGTCGAAC 60.532 52.381 0.00 0.00 0.00 3.95
2909 6860 5.234116 GTGTGTTTTATTTCCTTGCCTTGTG 59.766 40.000 0.00 0.00 0.00 3.33
2977 6928 6.484308 TGCAATGGTTATGACACATCTAGATG 59.516 38.462 27.63 27.63 44.15 2.90
2978 6929 6.484643 GTGCAATGGTTATGACACATCTAGAT 59.515 38.462 0.00 0.00 0.00 1.98
2979 6930 5.817296 GTGCAATGGTTATGACACATCTAGA 59.183 40.000 0.00 0.00 0.00 2.43
2980 6931 5.585844 TGTGCAATGGTTATGACACATCTAG 59.414 40.000 0.00 0.00 33.26 2.43
2981 6932 5.495640 TGTGCAATGGTTATGACACATCTA 58.504 37.500 0.00 0.00 33.26 1.98
2982 6933 4.334552 TGTGCAATGGTTATGACACATCT 58.665 39.130 0.00 0.00 33.26 2.90
2983 6934 4.700268 TGTGCAATGGTTATGACACATC 57.300 40.909 0.00 0.00 33.26 3.06
2984 6935 4.951715 AGATGTGCAATGGTTATGACACAT 59.048 37.500 6.16 6.16 42.56 3.21
2985 6936 4.334552 AGATGTGCAATGGTTATGACACA 58.665 39.130 0.00 0.00 38.34 3.72
2986 6937 4.970662 AGATGTGCAATGGTTATGACAC 57.029 40.909 0.00 0.00 0.00 3.67
2987 6938 7.643569 AATTAGATGTGCAATGGTTATGACA 57.356 32.000 0.00 0.00 0.00 3.58
2988 6939 8.931385 AAAATTAGATGTGCAATGGTTATGAC 57.069 30.769 0.00 0.00 0.00 3.06
2993 6944 8.530311 TGACATAAAATTAGATGTGCAATGGTT 58.470 29.630 9.29 0.00 36.42 3.67
2994 6945 8.065473 TGACATAAAATTAGATGTGCAATGGT 57.935 30.769 9.29 0.00 36.42 3.55
2995 6946 9.537192 AATGACATAAAATTAGATGTGCAATGG 57.463 29.630 9.29 0.00 36.42 3.16
3015 6966 8.609176 GCTTATCTCCACGTAAAATTAATGACA 58.391 33.333 0.00 0.00 0.00 3.58
3016 6967 7.792508 CGCTTATCTCCACGTAAAATTAATGAC 59.207 37.037 0.00 0.00 0.00 3.06
3017 6968 7.493320 ACGCTTATCTCCACGTAAAATTAATGA 59.507 33.333 0.00 0.00 36.91 2.57
3018 6969 7.582679 CACGCTTATCTCCACGTAAAATTAATG 59.417 37.037 0.00 0.00 36.91 1.90
3019 6970 7.493320 TCACGCTTATCTCCACGTAAAATTAAT 59.507 33.333 0.00 0.00 36.91 1.40
3020 6971 6.812656 TCACGCTTATCTCCACGTAAAATTAA 59.187 34.615 0.00 0.00 36.91 1.40
3021 6972 6.331845 TCACGCTTATCTCCACGTAAAATTA 58.668 36.000 0.00 0.00 36.91 1.40
3022 6973 5.172934 TCACGCTTATCTCCACGTAAAATT 58.827 37.500 0.00 0.00 36.91 1.82
3023 6974 4.751060 TCACGCTTATCTCCACGTAAAAT 58.249 39.130 0.00 0.00 36.91 1.82
3024 6975 4.177165 TCACGCTTATCTCCACGTAAAA 57.823 40.909 0.00 0.00 36.91 1.52
3025 6976 3.853831 TCACGCTTATCTCCACGTAAA 57.146 42.857 0.00 0.00 36.91 2.01
3026 6977 4.109766 CAATCACGCTTATCTCCACGTAA 58.890 43.478 0.00 0.00 36.91 3.18
3027 6978 3.379057 TCAATCACGCTTATCTCCACGTA 59.621 43.478 0.00 0.00 36.91 3.57
3028 6979 2.165641 TCAATCACGCTTATCTCCACGT 59.834 45.455 0.00 0.00 39.78 4.49
3029 6980 2.809446 TCAATCACGCTTATCTCCACG 58.191 47.619 0.00 0.00 0.00 4.94
3030 6981 5.753438 TGTATTCAATCACGCTTATCTCCAC 59.247 40.000 0.00 0.00 0.00 4.02
3031 6982 5.912892 TGTATTCAATCACGCTTATCTCCA 58.087 37.500 0.00 0.00 0.00 3.86
3032 6983 6.073548 CCTTGTATTCAATCACGCTTATCTCC 60.074 42.308 0.00 0.00 32.82 3.71
3033 6984 6.701841 TCCTTGTATTCAATCACGCTTATCTC 59.298 38.462 0.00 0.00 32.82 2.75
3034 6985 6.582636 TCCTTGTATTCAATCACGCTTATCT 58.417 36.000 0.00 0.00 32.82 1.98
3035 6986 6.844696 TCCTTGTATTCAATCACGCTTATC 57.155 37.500 0.00 0.00 32.82 1.75
3036 6987 7.172190 CAGATCCTTGTATTCAATCACGCTTAT 59.828 37.037 0.00 0.00 32.82 1.73
3037 6988 6.479990 CAGATCCTTGTATTCAATCACGCTTA 59.520 38.462 0.00 0.00 32.82 3.09
3038 6989 5.295292 CAGATCCTTGTATTCAATCACGCTT 59.705 40.000 0.00 0.00 32.82 4.68
3039 6990 4.813161 CAGATCCTTGTATTCAATCACGCT 59.187 41.667 0.00 0.00 32.82 5.07
3040 6991 4.811024 TCAGATCCTTGTATTCAATCACGC 59.189 41.667 0.00 0.00 32.82 5.34
3041 6992 5.051441 CGTCAGATCCTTGTATTCAATCACG 60.051 44.000 0.00 0.00 32.82 4.35
3042 6993 5.277058 GCGTCAGATCCTTGTATTCAATCAC 60.277 44.000 0.00 0.00 32.82 3.06
3043 6994 4.811024 GCGTCAGATCCTTGTATTCAATCA 59.189 41.667 0.00 0.00 32.82 2.57
3044 6995 4.212214 GGCGTCAGATCCTTGTATTCAATC 59.788 45.833 0.00 0.00 32.82 2.67
3045 6996 4.130118 GGCGTCAGATCCTTGTATTCAAT 58.870 43.478 0.00 0.00 32.82 2.57
3046 6997 3.531538 GGCGTCAGATCCTTGTATTCAA 58.468 45.455 0.00 0.00 0.00 2.69
3047 6998 2.481276 CGGCGTCAGATCCTTGTATTCA 60.481 50.000 0.00 0.00 0.00 2.57
3048 6999 2.128035 CGGCGTCAGATCCTTGTATTC 58.872 52.381 0.00 0.00 0.00 1.75
3049 7000 1.202533 CCGGCGTCAGATCCTTGTATT 60.203 52.381 6.01 0.00 0.00 1.89
3050 7001 0.389391 CCGGCGTCAGATCCTTGTAT 59.611 55.000 6.01 0.00 0.00 2.29
3051 7002 1.672854 CCCGGCGTCAGATCCTTGTA 61.673 60.000 6.01 0.00 0.00 2.41
3052 7003 2.579201 CCGGCGTCAGATCCTTGT 59.421 61.111 6.01 0.00 0.00 3.16
3053 7004 2.032860 ATCCCGGCGTCAGATCCTTG 62.033 60.000 6.01 0.00 0.00 3.61
3054 7005 1.762460 ATCCCGGCGTCAGATCCTT 60.762 57.895 6.01 0.00 0.00 3.36
3055 7006 2.123251 ATCCCGGCGTCAGATCCT 60.123 61.111 6.01 0.00 0.00 3.24
3056 7007 2.029666 CATCCCGGCGTCAGATCC 59.970 66.667 6.01 0.00 0.00 3.36
3057 7008 1.300233 GTCATCCCGGCGTCAGATC 60.300 63.158 6.01 0.00 0.00 2.75
3058 7009 2.815308 GTCATCCCGGCGTCAGAT 59.185 61.111 6.01 2.02 0.00 2.90
3059 7010 3.822192 CGTCATCCCGGCGTCAGA 61.822 66.667 6.01 0.00 0.00 3.27
3066 7017 4.873129 CACCTCGCGTCATCCCGG 62.873 72.222 5.77 0.00 0.00 5.73
3067 7018 4.129737 ACACCTCGCGTCATCCCG 62.130 66.667 5.77 0.00 0.00 5.14
3068 7019 2.202756 GACACCTCGCGTCATCCC 60.203 66.667 5.77 0.00 33.43 3.85
3069 7020 2.579787 CGACACCTCGCGTCATCC 60.580 66.667 5.77 0.00 32.72 3.51
3070 7021 1.868251 GTCGACACCTCGCGTCATC 60.868 63.158 11.55 0.00 39.96 2.92
3071 7022 2.178521 GTCGACACCTCGCGTCAT 59.821 61.111 11.55 0.00 39.96 3.06
3072 7023 4.379143 CGTCGACACCTCGCGTCA 62.379 66.667 17.16 0.00 39.96 4.35
3078 7029 3.681835 AGCCACCGTCGACACCTC 61.682 66.667 17.16 0.06 0.00 3.85
3079 7030 3.991051 CAGCCACCGTCGACACCT 61.991 66.667 17.16 0.58 0.00 4.00
3080 7031 2.814183 CTACAGCCACCGTCGACACC 62.814 65.000 17.16 0.00 0.00 4.16
3081 7032 1.443872 CTACAGCCACCGTCGACAC 60.444 63.158 17.16 0.00 0.00 3.67
3082 7033 2.632544 CCTACAGCCACCGTCGACA 61.633 63.158 17.16 0.00 0.00 4.35
3083 7034 2.181021 CCTACAGCCACCGTCGAC 59.819 66.667 5.18 5.18 0.00 4.20
3084 7035 3.066190 CCCTACAGCCACCGTCGA 61.066 66.667 0.00 0.00 0.00 4.20
3085 7036 3.352338 GACCCTACAGCCACCGTCG 62.352 68.421 0.00 0.00 0.00 5.12
3086 7037 2.577593 GACCCTACAGCCACCGTC 59.422 66.667 0.00 0.00 0.00 4.79
3087 7038 3.379445 CGACCCTACAGCCACCGT 61.379 66.667 0.00 0.00 0.00 4.83
3088 7039 2.830704 GAACGACCCTACAGCCACCG 62.831 65.000 0.00 0.00 0.00 4.94
3089 7040 1.079336 GAACGACCCTACAGCCACC 60.079 63.158 0.00 0.00 0.00 4.61
3090 7041 1.079336 GGAACGACCCTACAGCCAC 60.079 63.158 0.00 0.00 0.00 5.01
3091 7042 3.384348 GGAACGACCCTACAGCCA 58.616 61.111 0.00 0.00 0.00 4.75
3128 7079 3.512516 GAAGGCCAGCACATCGCC 61.513 66.667 5.01 0.00 44.04 5.54
3129 7080 3.869272 CGAAGGCCAGCACATCGC 61.869 66.667 5.01 0.00 42.91 4.58
3130 7081 3.197790 CCGAAGGCCAGCACATCG 61.198 66.667 5.01 4.81 46.14 3.84
3158 7109 3.320078 CGTAGCATCGCCGTTCGG 61.320 66.667 6.90 6.90 39.05 4.30
3159 7110 1.680105 AAACGTAGCATCGCCGTTCG 61.680 55.000 0.00 0.00 43.32 3.95
3160 7111 0.441145 AAAACGTAGCATCGCCGTTC 59.559 50.000 0.00 0.00 43.32 3.95
3161 7112 0.869730 AAAAACGTAGCATCGCCGTT 59.130 45.000 0.00 0.00 45.76 4.44
3162 7113 0.441145 GAAAAACGTAGCATCGCCGT 59.559 50.000 0.00 0.00 36.17 5.68
3163 7114 0.583083 CGAAAAACGTAGCATCGCCG 60.583 55.000 0.00 0.00 37.22 6.46
3164 7115 0.247537 CCGAAAAACGTAGCATCGCC 60.248 55.000 0.00 0.00 40.78 5.54
3165 7116 0.441145 ACCGAAAAACGTAGCATCGC 59.559 50.000 0.00 0.00 40.78 4.58
3166 7117 2.492001 CAACCGAAAAACGTAGCATCG 58.508 47.619 0.00 0.00 40.78 3.84
3167 7118 2.224784 ACCAACCGAAAAACGTAGCATC 59.775 45.455 0.00 0.00 40.78 3.91
3168 7119 2.031508 CACCAACCGAAAAACGTAGCAT 60.032 45.455 0.00 0.00 40.78 3.79
3169 7120 1.331138 CACCAACCGAAAAACGTAGCA 59.669 47.619 0.00 0.00 40.78 3.49
3170 7121 1.334329 CCACCAACCGAAAAACGTAGC 60.334 52.381 0.00 0.00 40.78 3.58
3171 7122 2.673976 CCACCAACCGAAAAACGTAG 57.326 50.000 0.00 0.00 40.78 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.