Multiple sequence alignment - TraesCS5B01G178700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G178700 chr5B 100.000 3080 0 0 1 3080 326613847 326610768 0.000000e+00 5688
1 TraesCS5B01G178700 chr5B 89.262 298 30 1 2 299 325683226 325682931 3.750000e-99 372
2 TraesCS5B01G178700 chr5A 92.414 2452 91 35 288 2688 379402209 379399802 0.000000e+00 3410
3 TraesCS5B01G178700 chr5D 94.618 2081 60 16 288 2332 287572458 287570394 0.000000e+00 3175
4 TraesCS5B01G178700 chr5D 89.251 307 23 4 2 308 41228297 41228593 2.900000e-100 375
5 TraesCS5B01G178700 chr5D 90.909 187 10 3 2314 2493 287570381 287570195 8.530000e-61 244
6 TraesCS5B01G178700 chr6D 87.813 878 74 19 802 1651 465011752 465010880 0.000000e+00 998
7 TraesCS5B01G178700 chr6D 88.617 817 77 14 844 1648 464984337 464985149 0.000000e+00 979
8 TraesCS5B01G178700 chr6D 95.000 160 8 0 1738 1897 464985273 464985432 5.100000e-63 252
9 TraesCS5B01G178700 chr6D 92.157 153 12 0 1738 1890 465010805 465010653 1.860000e-52 217
10 TraesCS5B01G178700 chr6D 93.077 130 5 4 1981 2107 464985538 464985666 1.460000e-43 187
11 TraesCS5B01G178700 chr6D 93.750 112 6 1 1981 2092 465010521 465010411 1.900000e-37 167
12 TraesCS5B01G178700 chr6B 89.607 789 73 6 867 1651 709020832 709020049 0.000000e+00 994
13 TraesCS5B01G178700 chr6B 87.414 874 83 17 802 1649 708988591 708989463 0.000000e+00 979
14 TraesCS5B01G178700 chr6B 83.777 376 40 15 1738 2096 708989566 708989937 1.370000e-88 337
15 TraesCS5B01G178700 chr6B 83.333 360 38 16 1738 2092 709019970 709019628 2.310000e-81 313
16 TraesCS5B01G178700 chr6A 89.721 788 65 8 867 1653 611523316 611522544 0.000000e+00 992
17 TraesCS5B01G178700 chr6A 87.379 824 82 18 844 1650 611513145 611513963 0.000000e+00 926
18 TraesCS5B01G178700 chr6A 92.542 295 17 3 2 295 286337242 286337532 4.750000e-113 418
19 TraesCS5B01G178700 chr6A 88.319 351 32 5 997 1347 456752522 456752181 2.210000e-111 412
20 TraesCS5B01G178700 chr6A 83.733 375 37 19 1738 2093 611522442 611522073 1.770000e-87 333
21 TraesCS5B01G178700 chr6A 83.245 376 37 22 1738 2093 611514080 611514449 3.830000e-84 322
22 TraesCS5B01G178700 chr2D 93.174 293 15 3 2 293 69146919 69147207 2.840000e-115 425
23 TraesCS5B01G178700 chr2D 78.378 592 100 17 1096 1661 480181624 480181035 2.920000e-95 359
24 TraesCS5B01G178700 chr1B 91.837 294 16 5 2 295 458701308 458701593 1.330000e-108 403
25 TraesCS5B01G178700 chr3D 91.468 293 19 3 1 293 458318246 458318532 6.190000e-107 398
26 TraesCS5B01G178700 chr3D 90.253 277 26 1 2691 2967 595863545 595863270 8.120000e-96 361
27 TraesCS5B01G178700 chr3D 85.324 293 35 7 2694 2981 120920705 120920416 2.320000e-76 296
28 TraesCS5B01G178700 chr7D 91.156 294 15 6 2 293 413242204 413241920 3.720000e-104 388
29 TraesCS5B01G178700 chr7D 90.847 295 18 5 1 295 592976902 592977187 1.340000e-103 387
30 TraesCS5B01G178700 chr1D 90.068 292 21 4 2 293 259771217 259771500 3.750000e-99 372
31 TraesCS5B01G178700 chr2A 88.811 286 24 4 2694 2972 159188305 159188589 8.180000e-91 344
32 TraesCS5B01G178700 chr2A 85.906 149 21 0 1740 1888 663329322 663329174 3.180000e-35 159
33 TraesCS5B01G178700 chr7B 88.028 284 24 8 2692 2972 513527448 513527724 8.230000e-86 327
34 TraesCS5B01G178700 chr1A 86.598 291 30 5 2689 2972 590006621 590006909 2.310000e-81 313
35 TraesCS5B01G178700 chr4B 86.102 295 31 8 2692 2978 85640951 85641243 2.980000e-80 309
36 TraesCS5B01G178700 chr3B 86.007 293 35 5 2692 2979 813266090 813266381 2.980000e-80 309
37 TraesCS5B01G178700 chrUn 85.570 298 32 9 2691 2979 178511016 178511311 4.990000e-78 302
38 TraesCS5B01G178700 chr2B 85.424 295 32 9 2694 2979 30230368 30230076 2.320000e-76 296


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G178700 chr5B 326610768 326613847 3079 True 5688.000000 5688 100.000000 1 3080 1 chr5B.!!$R2 3079
1 TraesCS5B01G178700 chr5A 379399802 379402209 2407 True 3410.000000 3410 92.414000 288 2688 1 chr5A.!!$R1 2400
2 TraesCS5B01G178700 chr5D 287570195 287572458 2263 True 1709.500000 3175 92.763500 288 2493 2 chr5D.!!$R1 2205
3 TraesCS5B01G178700 chr6D 464984337 464985666 1329 False 472.666667 979 92.231333 844 2107 3 chr6D.!!$F1 1263
4 TraesCS5B01G178700 chr6D 465010411 465011752 1341 True 460.666667 998 91.240000 802 2092 3 chr6D.!!$R1 1290
5 TraesCS5B01G178700 chr6B 708988591 708989937 1346 False 658.000000 979 85.595500 802 2096 2 chr6B.!!$F1 1294
6 TraesCS5B01G178700 chr6B 709019628 709020832 1204 True 653.500000 994 86.470000 867 2092 2 chr6B.!!$R1 1225
7 TraesCS5B01G178700 chr6A 611522073 611523316 1243 True 662.500000 992 86.727000 867 2093 2 chr6A.!!$R2 1226
8 TraesCS5B01G178700 chr6A 611513145 611514449 1304 False 624.000000 926 85.312000 844 2093 2 chr6A.!!$F2 1249
9 TraesCS5B01G178700 chr2D 480181035 480181624 589 True 359.000000 359 78.378000 1096 1661 1 chr2D.!!$R1 565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
265 266 0.247934 ACTAATTTTTAGCGCGCGGC 60.248 50.0 33.06 23.14 44.05 6.53 F
1654 1735 1.586154 CGTCCCCGTAAGTACACCGT 61.586 60.0 0.00 0.00 0.00 4.83 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1722 1804 0.734889 CTGCACCAAATCCGTCCATC 59.265 55.0 0.0 0.0 0.0 3.51 R
2899 3164 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.0 0.0 0.0 0.0 4.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.843334 TGGGTTGTAATAATAACGAAATTGAAC 57.157 29.630 0.00 0.00 0.00 3.18
98 99 9.598517 TTTGTTAGTTTGATCATTTTTGCTTCT 57.401 25.926 0.00 0.00 0.00 2.85
104 105 9.985730 AGTTTGATCATTTTTGCTTCTATTTGA 57.014 25.926 0.00 0.00 0.00 2.69
125 126 8.877808 TTTGAAATGTATATGTTGTTTGTGCA 57.122 26.923 0.00 0.00 0.00 4.57
126 127 8.877808 TTGAAATGTATATGTTGTTTGTGCAA 57.122 26.923 0.00 0.00 0.00 4.08
127 128 8.518151 TGAAATGTATATGTTGTTTGTGCAAG 57.482 30.769 0.00 0.00 0.00 4.01
128 129 8.140628 TGAAATGTATATGTTGTTTGTGCAAGT 58.859 29.630 0.00 0.00 0.00 3.16
129 130 8.519492 AAATGTATATGTTGTTTGTGCAAGTC 57.481 30.769 0.00 0.00 0.00 3.01
130 131 6.625873 TGTATATGTTGTTTGTGCAAGTCA 57.374 33.333 0.00 0.00 0.00 3.41
131 132 6.434596 TGTATATGTTGTTTGTGCAAGTCAC 58.565 36.000 0.00 0.00 45.82 3.67
144 145 4.741781 GTCACGCGCGCTGCAATT 62.742 61.111 32.58 5.07 46.97 2.32
145 146 4.024143 TCACGCGCGCTGCAATTT 62.024 55.556 32.58 4.13 46.97 1.82
146 147 3.098958 CACGCGCGCTGCAATTTT 61.099 55.556 32.58 3.21 46.97 1.82
147 148 2.354539 ACGCGCGCTGCAATTTTT 60.355 50.000 32.58 2.28 46.97 1.94
165 166 2.027003 TTTACCCGTTATTGGAGCGG 57.973 50.000 0.00 0.00 44.55 5.52
166 167 0.462403 TTACCCGTTATTGGAGCGGC 60.462 55.000 0.00 0.00 43.70 6.53
167 168 2.632136 TACCCGTTATTGGAGCGGCG 62.632 60.000 0.51 0.51 43.70 6.46
168 169 3.937062 CCGTTATTGGAGCGGCGC 61.937 66.667 26.86 26.86 38.99 6.53
169 170 4.279535 CGTTATTGGAGCGGCGCG 62.280 66.667 27.59 0.00 0.00 6.86
185 186 2.399217 CGCTCGCGCTGCATTTTA 59.601 55.556 20.22 0.00 0.00 1.52
186 187 1.649348 CGCTCGCGCTGCATTTTAG 60.649 57.895 20.22 3.36 0.00 1.85
187 188 1.936398 GCTCGCGCTGCATTTTAGC 60.936 57.895 16.72 6.94 37.80 3.09
193 194 2.793946 CTGCATTTTAGCGCGGCT 59.206 55.556 8.83 8.38 43.41 5.52
194 195 1.584483 CTGCATTTTAGCGCGGCTG 60.584 57.895 8.83 0.53 40.10 4.85
195 196 2.257286 CTGCATTTTAGCGCGGCTGT 62.257 55.000 8.83 0.00 40.10 4.40
196 197 1.154035 GCATTTTAGCGCGGCTGTT 60.154 52.632 8.83 0.00 40.10 3.16
197 198 1.405469 GCATTTTAGCGCGGCTGTTG 61.405 55.000 8.83 0.00 40.10 3.33
198 199 0.798009 CATTTTAGCGCGGCTGTTGG 60.798 55.000 8.83 0.00 40.10 3.77
199 200 0.958382 ATTTTAGCGCGGCTGTTGGA 60.958 50.000 8.83 0.00 40.10 3.53
200 201 1.573829 TTTTAGCGCGGCTGTTGGAG 61.574 55.000 8.83 0.00 40.10 3.86
223 224 3.416382 GCTGACGGCCGCGTAAAA 61.416 61.111 28.58 3.22 34.27 1.52
224 225 2.472934 CTGACGGCCGCGTAAAAC 59.527 61.111 28.58 8.59 0.00 2.43
225 226 3.018840 CTGACGGCCGCGTAAAACC 62.019 63.158 28.58 4.77 0.00 3.27
226 227 3.043121 GACGGCCGCGTAAAACCA 61.043 61.111 28.58 0.00 0.00 3.67
227 228 3.018840 GACGGCCGCGTAAAACCAG 62.019 63.158 28.58 0.00 0.00 4.00
228 229 3.795342 CGGCCGCGTAAAACCAGG 61.795 66.667 14.67 0.00 0.00 4.45
229 230 4.111016 GGCCGCGTAAAACCAGGC 62.111 66.667 4.92 0.00 46.51 4.85
233 234 4.832767 GCGTAAAACCAGGCGAAC 57.167 55.556 0.00 0.00 0.00 3.95
234 235 1.154543 GCGTAAAACCAGGCGAACG 60.155 57.895 0.00 0.00 0.00 3.95
235 236 1.494189 CGTAAAACCAGGCGAACGG 59.506 57.895 0.00 0.00 0.00 4.44
236 237 1.208358 GTAAAACCAGGCGAACGGC 59.792 57.895 12.58 12.58 42.51 5.68
237 238 2.319096 TAAAACCAGGCGAACGGCG 61.319 57.895 4.80 4.80 44.92 6.46
251 252 4.174129 GGCGCGCGGCAAACTAAT 62.174 61.111 45.39 0.00 46.16 1.73
252 253 2.202427 GCGCGCGGCAAACTAATT 60.202 55.556 33.06 0.00 42.87 1.40
253 254 1.799916 GCGCGCGGCAAACTAATTT 60.800 52.632 33.06 0.00 42.87 1.82
254 255 1.341369 GCGCGCGGCAAACTAATTTT 61.341 50.000 33.06 0.00 42.87 1.82
255 256 1.056869 CGCGCGGCAAACTAATTTTT 58.943 45.000 24.84 0.00 0.00 1.94
256 257 2.243407 CGCGCGGCAAACTAATTTTTA 58.757 42.857 24.84 0.00 0.00 1.52
257 258 2.275253 CGCGCGGCAAACTAATTTTTAG 59.725 45.455 24.84 0.00 0.00 1.85
258 259 2.027569 GCGCGGCAAACTAATTTTTAGC 59.972 45.455 8.83 0.00 0.00 3.09
259 260 2.275253 CGCGGCAAACTAATTTTTAGCG 59.725 45.455 0.00 0.00 35.93 4.26
260 261 2.027569 GCGGCAAACTAATTTTTAGCGC 59.972 45.455 0.00 0.00 0.00 5.92
261 262 2.275253 CGGCAAACTAATTTTTAGCGCG 59.725 45.455 0.00 0.00 0.00 6.86
262 263 2.027569 GGCAAACTAATTTTTAGCGCGC 59.972 45.455 26.66 26.66 0.00 6.86
263 264 2.283672 GCAAACTAATTTTTAGCGCGCG 60.284 45.455 28.44 28.44 0.00 6.86
264 265 2.168201 AACTAATTTTTAGCGCGCGG 57.832 45.000 33.06 13.66 0.00 6.46
265 266 0.247934 ACTAATTTTTAGCGCGCGGC 60.248 50.000 33.06 23.14 44.05 6.53
285 286 4.389576 GTTGCGCGCCTGTTGGAG 62.390 66.667 30.77 0.00 36.16 3.86
286 287 4.617520 TTGCGCGCCTGTTGGAGA 62.618 61.111 30.77 2.53 34.95 3.71
291 292 2.467826 GCGCCTGTTGGAGATGCTC 61.468 63.158 0.00 0.00 34.95 4.26
405 406 2.967063 ATCCTTCTAGTCCCCGCCCC 62.967 65.000 0.00 0.00 0.00 5.80
406 407 3.162154 CTTCTAGTCCCCGCCCCC 61.162 72.222 0.00 0.00 0.00 5.40
548 549 7.220300 CACTTTCTGCTCTCATAATGCAAAATC 59.780 37.037 0.00 0.00 36.22 2.17
551 552 6.594744 TCTGCTCTCATAATGCAAAATCCTA 58.405 36.000 0.00 0.00 36.22 2.94
661 662 3.973206 AACCATTCGATACCACAGACA 57.027 42.857 0.00 0.00 0.00 3.41
848 857 4.453136 AGCAAAGGCAAAATAAGCACATTG 59.547 37.500 0.00 0.00 44.61 2.82
905 928 1.603172 CCCCGCTATAAGAAGCACTCG 60.603 57.143 0.00 0.00 42.91 4.18
1654 1735 1.586154 CGTCCCCGTAAGTACACCGT 61.586 60.000 0.00 0.00 0.00 4.83
1715 1797 7.148035 TGGATGATGACCAAATTAACTGATGTG 60.148 37.037 0.00 0.00 34.25 3.21
1716 1798 7.148018 GGATGATGACCAAATTAACTGATGTGT 60.148 37.037 0.00 0.00 0.00 3.72
1718 1800 6.489700 TGATGACCAAATTAACTGATGTGTGT 59.510 34.615 0.00 0.00 0.00 3.72
1722 1804 7.094420 TGACCAAATTAACTGATGTGTGTATGG 60.094 37.037 0.00 0.00 0.00 2.74
1728 1810 4.142609 ACTGATGTGTGTATGGATGGAC 57.857 45.455 0.00 0.00 0.00 4.02
1901 2039 7.906160 CGACCACGTAAGAAGAATCAATTAAT 58.094 34.615 0.00 0.00 43.62 1.40
1944 2095 9.771534 AGTTAGAGACTAATTATTCATGCTTCC 57.228 33.333 5.71 0.00 36.65 3.46
2165 2380 4.025647 GCTGATCGTTGCTCCTGTAATTAC 60.026 45.833 8.75 8.75 0.00 1.89
2193 2408 0.798771 CGTACTGTTCCTGAGCGAGC 60.799 60.000 0.00 0.00 0.00 5.03
2194 2409 0.798771 GTACTGTTCCTGAGCGAGCG 60.799 60.000 0.00 0.00 0.00 5.03
2214 2431 0.930310 CGTGTGTGTGTCCTTCAGTG 59.070 55.000 0.00 0.00 0.00 3.66
2262 2479 2.617274 GCACTTCTTCACCGCACCC 61.617 63.158 0.00 0.00 0.00 4.61
2275 2492 1.743321 CGCACCCACCCAAAATGTGT 61.743 55.000 0.00 0.00 31.71 3.72
2317 2564 5.767816 TCCCTCTCTTTTGTAAGCAAAAC 57.232 39.130 1.89 0.00 46.12 2.43
2319 2566 4.036380 CCCTCTCTTTTGTAAGCAAAACGT 59.964 41.667 1.89 0.00 46.12 3.99
2379 2626 1.998315 CGATCTTCAAGTGGAGTGCTG 59.002 52.381 0.00 0.00 0.00 4.41
2396 2643 5.103000 AGTGCTGTTACATCGATACTTGTC 58.897 41.667 0.00 0.00 0.00 3.18
2447 2695 7.612633 TGGGTTTGTACTAAGTCAAACTTCTTT 59.387 33.333 18.62 0.00 46.88 2.52
2498 2752 9.976511 TGCTCTACACCATTAAATATACAGTAC 57.023 33.333 0.00 0.00 0.00 2.73
2499 2753 9.976511 GCTCTACACCATTAAATATACAGTACA 57.023 33.333 0.00 0.00 0.00 2.90
2557 2811 4.882671 ATTTGATGTTGTAGATGTCGGC 57.117 40.909 0.00 0.00 0.00 5.54
2559 2813 2.616960 TGATGTTGTAGATGTCGGCAC 58.383 47.619 0.00 0.00 0.00 5.01
2560 2814 2.028567 TGATGTTGTAGATGTCGGCACA 60.029 45.455 0.00 0.00 36.78 4.57
2568 2822 5.483811 TGTAGATGTCGGCACATTTTCTAA 58.516 37.500 0.00 0.00 43.79 2.10
2569 2823 5.935206 TGTAGATGTCGGCACATTTTCTAAA 59.065 36.000 0.00 0.00 43.79 1.85
2571 2825 5.699839 AGATGTCGGCACATTTTCTAAAAC 58.300 37.500 0.00 0.00 43.79 2.43
2576 2830 3.428534 CGGCACATTTTCTAAAACCTTGC 59.571 43.478 8.13 8.13 33.15 4.01
2597 2851 7.094463 CCTTGCTCAGATGTAAAGAAGTTTGAT 60.094 37.037 0.00 0.00 0.00 2.57
2633 2887 9.586435 ACCTAAAACTTCAAGTCTTTTGAAATG 57.414 29.630 0.00 0.00 37.89 2.32
2680 2945 9.453572 AAAATGTTCTCTATATGTGTGTCATGT 57.546 29.630 0.00 0.00 37.91 3.21
2682 2947 7.832503 TGTTCTCTATATGTGTGTCATGTTG 57.167 36.000 0.00 0.00 37.91 3.33
2688 2953 7.327214 TCTATATGTGTGTCATGTTGTGCTTA 58.673 34.615 0.00 0.00 37.91 3.09
2689 2954 6.816134 ATATGTGTGTCATGTTGTGCTTAA 57.184 33.333 0.00 0.00 37.91 1.85
2690 2955 4.285807 TGTGTGTCATGTTGTGCTTAAC 57.714 40.909 0.00 0.00 0.00 2.01
2691 2956 3.944650 TGTGTGTCATGTTGTGCTTAACT 59.055 39.130 0.00 0.00 0.00 2.24
2692 2957 4.397730 TGTGTGTCATGTTGTGCTTAACTT 59.602 37.500 0.00 0.00 0.00 2.66
2693 2958 5.105957 TGTGTGTCATGTTGTGCTTAACTTT 60.106 36.000 0.00 0.00 0.00 2.66
2694 2959 5.804979 GTGTGTCATGTTGTGCTTAACTTTT 59.195 36.000 0.00 0.00 0.00 2.27
2695 2960 6.310224 GTGTGTCATGTTGTGCTTAACTTTTT 59.690 34.615 0.00 0.00 0.00 1.94
2716 2981 5.798015 TTTTTAACACAGTACAGACGCAA 57.202 34.783 0.00 0.00 0.00 4.85
2718 2983 1.217882 AACACAGTACAGACGCAAGC 58.782 50.000 0.00 0.00 45.62 4.01
2719 2984 0.939577 ACACAGTACAGACGCAAGCG 60.940 55.000 13.50 13.50 46.03 4.68
2720 2985 2.022129 ACAGTACAGACGCAAGCGC 61.022 57.895 15.09 0.00 44.19 5.92
2721 2986 1.734477 CAGTACAGACGCAAGCGCT 60.734 57.895 15.09 2.64 44.19 5.92
2722 2987 1.444553 AGTACAGACGCAAGCGCTC 60.445 57.895 12.06 11.06 44.19 5.03
2723 2988 1.733041 GTACAGACGCAAGCGCTCA 60.733 57.895 12.06 0.83 44.19 4.26
2724 2989 1.078759 GTACAGACGCAAGCGCTCAT 61.079 55.000 12.06 0.00 44.19 2.90
2725 2990 0.454196 TACAGACGCAAGCGCTCATA 59.546 50.000 12.06 5.16 44.19 2.15
2726 2991 0.179100 ACAGACGCAAGCGCTCATAT 60.179 50.000 12.06 0.00 44.19 1.78
2727 2992 1.067060 ACAGACGCAAGCGCTCATATA 59.933 47.619 12.06 0.00 44.19 0.86
2728 2993 1.453524 CAGACGCAAGCGCTCATATAC 59.546 52.381 12.06 1.00 44.19 1.47
2729 2994 1.067060 AGACGCAAGCGCTCATATACA 59.933 47.619 12.06 0.00 44.19 2.29
2730 2995 1.190323 GACGCAAGCGCTCATATACAC 59.810 52.381 12.06 0.00 44.19 2.90
2731 2996 1.208259 CGCAAGCGCTCATATACACA 58.792 50.000 12.06 0.00 35.30 3.72
2732 2997 1.071239 CGCAAGCGCTCATATACACAC 60.071 52.381 12.06 0.00 35.30 3.82
2733 2998 1.933181 GCAAGCGCTCATATACACACA 59.067 47.619 12.06 0.00 34.30 3.72
2734 2999 2.285834 GCAAGCGCTCATATACACACAC 60.286 50.000 12.06 0.00 34.30 3.82
2735 3000 2.929398 CAAGCGCTCATATACACACACA 59.071 45.455 12.06 0.00 0.00 3.72
2736 3001 3.459232 AGCGCTCATATACACACACAT 57.541 42.857 2.64 0.00 0.00 3.21
2737 3002 4.584327 AGCGCTCATATACACACACATA 57.416 40.909 2.64 0.00 0.00 2.29
2738 3003 4.299155 AGCGCTCATATACACACACATAC 58.701 43.478 2.64 0.00 0.00 2.39
2739 3004 3.428870 GCGCTCATATACACACACATACC 59.571 47.826 0.00 0.00 0.00 2.73
2740 3005 4.616953 CGCTCATATACACACACATACCA 58.383 43.478 0.00 0.00 0.00 3.25
2741 3006 4.444388 CGCTCATATACACACACATACCAC 59.556 45.833 0.00 0.00 0.00 4.16
2742 3007 5.601662 GCTCATATACACACACATACCACT 58.398 41.667 0.00 0.00 0.00 4.00
2743 3008 5.692204 GCTCATATACACACACATACCACTC 59.308 44.000 0.00 0.00 0.00 3.51
2744 3009 6.682861 GCTCATATACACACACATACCACTCA 60.683 42.308 0.00 0.00 0.00 3.41
2745 3010 7.360113 TCATATACACACACATACCACTCAT 57.640 36.000 0.00 0.00 0.00 2.90
2746 3011 7.433680 TCATATACACACACATACCACTCATC 58.566 38.462 0.00 0.00 0.00 2.92
2747 3012 3.334583 ACACACACATACCACTCATCC 57.665 47.619 0.00 0.00 0.00 3.51
2748 3013 2.027192 ACACACACATACCACTCATCCC 60.027 50.000 0.00 0.00 0.00 3.85
2749 3014 2.237143 CACACACATACCACTCATCCCT 59.763 50.000 0.00 0.00 0.00 4.20
2750 3015 3.450817 CACACACATACCACTCATCCCTA 59.549 47.826 0.00 0.00 0.00 3.53
2751 3016 4.101585 CACACACATACCACTCATCCCTAT 59.898 45.833 0.00 0.00 0.00 2.57
2752 3017 4.101585 ACACACATACCACTCATCCCTATG 59.898 45.833 0.00 0.00 0.00 2.23
2753 3018 4.344968 CACACATACCACTCATCCCTATGA 59.655 45.833 0.00 0.00 39.87 2.15
2754 3019 4.968719 ACACATACCACTCATCCCTATGAA 59.031 41.667 0.00 0.00 41.57 2.57
2755 3020 5.163301 ACACATACCACTCATCCCTATGAAC 60.163 44.000 0.00 0.00 41.57 3.18
2756 3021 4.039245 ACATACCACTCATCCCTATGAACG 59.961 45.833 0.00 0.00 41.57 3.95
2757 3022 1.139058 ACCACTCATCCCTATGAACGC 59.861 52.381 0.00 0.00 41.57 4.84
2758 3023 1.138859 CCACTCATCCCTATGAACGCA 59.861 52.381 0.00 0.00 41.57 5.24
2759 3024 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
2760 3025 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
2761 3026 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
2762 3027 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
2763 3028 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
2764 3029 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
2765 3030 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
2766 3031 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
2767 3032 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
2768 3033 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
2769 3034 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
2770 3035 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
2771 3036 4.830765 ACGCACACACGCACACCT 62.831 61.111 0.00 0.00 36.19 4.00
2772 3037 4.000557 CGCACACACGCACACCTC 62.001 66.667 0.00 0.00 0.00 3.85
2773 3038 3.649986 GCACACACGCACACCTCC 61.650 66.667 0.00 0.00 0.00 4.30
2774 3039 2.203001 CACACACGCACACCTCCA 60.203 61.111 0.00 0.00 0.00 3.86
2775 3040 1.597854 CACACACGCACACCTCCAT 60.598 57.895 0.00 0.00 0.00 3.41
2776 3041 0.320334 CACACACGCACACCTCCATA 60.320 55.000 0.00 0.00 0.00 2.74
2777 3042 0.037326 ACACACGCACACCTCCATAG 60.037 55.000 0.00 0.00 0.00 2.23
2788 3053 2.045280 CTCCATAGGACTGAGCCGG 58.955 63.158 0.00 0.00 0.00 6.13
2789 3054 2.093537 CTCCATAGGACTGAGCCGGC 62.094 65.000 21.89 21.89 0.00 6.13
2790 3055 2.434843 CCATAGGACTGAGCCGGCA 61.435 63.158 31.54 7.98 0.00 5.69
2791 3056 1.750930 CATAGGACTGAGCCGGCAT 59.249 57.895 31.54 14.28 0.00 4.40
2792 3057 0.969149 CATAGGACTGAGCCGGCATA 59.031 55.000 31.54 16.21 0.00 3.14
2793 3058 1.552337 CATAGGACTGAGCCGGCATAT 59.448 52.381 31.54 8.11 0.00 1.78
2794 3059 1.257743 TAGGACTGAGCCGGCATATC 58.742 55.000 31.54 18.63 0.00 1.63
2795 3060 0.760567 AGGACTGAGCCGGCATATCA 60.761 55.000 31.54 22.44 0.00 2.15
2796 3061 0.322975 GGACTGAGCCGGCATATCAT 59.677 55.000 31.54 13.17 0.00 2.45
2797 3062 1.674221 GGACTGAGCCGGCATATCATC 60.674 57.143 31.54 16.99 0.00 2.92
2798 3063 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
2799 3064 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2800 3065 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2801 3066 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2802 3067 2.104622 TGAGCCGGCATATCATCTTGAA 59.895 45.455 31.54 0.00 0.00 2.69
2803 3068 3.141398 GAGCCGGCATATCATCTTGAAA 58.859 45.455 31.54 0.00 0.00 2.69
2804 3069 3.755378 GAGCCGGCATATCATCTTGAAAT 59.245 43.478 31.54 0.06 0.00 2.17
2805 3070 4.147321 AGCCGGCATATCATCTTGAAATT 58.853 39.130 31.54 0.00 0.00 1.82
2806 3071 4.586001 AGCCGGCATATCATCTTGAAATTT 59.414 37.500 31.54 0.00 0.00 1.82
2807 3072 5.769662 AGCCGGCATATCATCTTGAAATTTA 59.230 36.000 31.54 0.00 0.00 1.40
2808 3073 5.858581 GCCGGCATATCATCTTGAAATTTAC 59.141 40.000 24.80 0.00 0.00 2.01
2809 3074 6.079763 CCGGCATATCATCTTGAAATTTACG 58.920 40.000 0.00 0.00 0.00 3.18
2810 3075 6.073276 CCGGCATATCATCTTGAAATTTACGA 60.073 38.462 0.00 0.00 0.00 3.43
2811 3076 7.351981 CGGCATATCATCTTGAAATTTACGAA 58.648 34.615 0.00 0.00 0.00 3.85
2812 3077 8.017373 CGGCATATCATCTTGAAATTTACGAAT 58.983 33.333 0.00 0.00 0.00 3.34
2813 3078 9.683069 GGCATATCATCTTGAAATTTACGAATT 57.317 29.630 0.00 0.00 37.06 2.17
2818 3083 7.240674 TCATCTTGAAATTTACGAATTCACCG 58.759 34.615 6.22 0.00 34.44 4.94
2819 3084 6.548441 TCTTGAAATTTACGAATTCACCGT 57.452 33.333 6.22 0.88 43.26 4.83
2820 3085 7.655236 TCTTGAAATTTACGAATTCACCGTA 57.345 32.000 6.22 0.00 40.95 4.02
2821 3086 7.735500 TCTTGAAATTTACGAATTCACCGTAG 58.264 34.615 6.22 0.00 42.42 3.51
2822 3087 6.411630 TGAAATTTACGAATTCACCGTAGG 57.588 37.500 6.22 0.00 44.19 3.18
2823 3088 4.870221 AATTTACGAATTCACCGTAGGC 57.130 40.909 6.22 0.00 40.98 3.93
2824 3089 4.255301 AATTTACGAATTCACCGTAGGCA 58.745 39.130 6.22 0.00 40.98 4.75
2825 3090 4.093850 AATTTACGAATTCACCGTAGGCAC 59.906 41.667 6.22 0.00 40.98 5.01
2826 3091 6.875699 AATTTACGAATTCACCGTAGGCACC 61.876 44.000 6.22 0.00 40.98 5.01
2827 3092 8.966240 AATTTACGAATTCACCGTAGGCACCT 62.966 42.308 6.22 0.00 40.98 4.00
2833 3098 3.207354 CCGTAGGCACCTCGTCAT 58.793 61.111 0.00 0.00 46.14 3.06
2834 3099 1.065928 CCGTAGGCACCTCGTCATC 59.934 63.158 0.00 0.00 46.14 2.92
2835 3100 1.298413 CGTAGGCACCTCGTCATCG 60.298 63.158 0.00 0.00 38.55 3.84
2836 3101 1.712018 CGTAGGCACCTCGTCATCGA 61.712 60.000 0.00 0.00 44.12 3.59
2837 3102 0.248539 GTAGGCACCTCGTCATCGAC 60.249 60.000 0.00 0.00 41.35 4.20
2838 3103 0.678684 TAGGCACCTCGTCATCGACA 60.679 55.000 0.00 0.00 41.35 4.35
2839 3104 1.517257 GGCACCTCGTCATCGACAG 60.517 63.158 0.00 0.00 41.35 3.51
2840 3105 1.517257 GCACCTCGTCATCGACAGG 60.517 63.158 0.00 9.60 41.35 4.00
2841 3106 1.934220 GCACCTCGTCATCGACAGGA 61.934 60.000 15.15 0.00 41.35 3.86
2842 3107 0.526211 CACCTCGTCATCGACAGGAA 59.474 55.000 15.15 0.00 41.35 3.36
2843 3108 0.526662 ACCTCGTCATCGACAGGAAC 59.473 55.000 15.15 0.00 41.35 3.62
2844 3109 0.523546 CCTCGTCATCGACAGGAACG 60.524 60.000 0.00 0.00 41.35 3.95
2845 3110 0.168348 CTCGTCATCGACAGGAACGT 59.832 55.000 0.00 0.00 41.35 3.99
2846 3111 0.167470 TCGTCATCGACAGGAACGTC 59.833 55.000 0.00 0.00 41.35 4.34
2847 3112 0.168348 CGTCATCGACAGGAACGTCT 59.832 55.000 0.00 0.00 39.71 4.18
2848 3113 1.790838 CGTCATCGACAGGAACGTCTC 60.791 57.143 0.00 0.00 39.71 3.36
2849 3114 0.809385 TCATCGACAGGAACGTCTCC 59.191 55.000 8.26 8.26 45.81 3.71
2856 3121 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
2857 3122 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
2858 3123 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
2859 3124 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
2860 3125 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
2861 3126 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
2862 3127 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
2863 3128 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
2864 3129 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
2865 3130 2.046023 CCTCCCACTGAATGCGCA 60.046 61.111 14.96 14.96 0.00 6.09
2866 3131 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
2867 3132 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
2868 3133 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
2879 3144 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
2880 3145 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
2881 3146 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
2882 3147 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
2883 3148 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
2884 3149 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
2885 3150 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
2886 3151 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
2887 3152 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
2888 3153 3.375922 TCGCCGGAAATCCTGAAATAAAC 59.624 43.478 5.05 0.00 0.00 2.01
2889 3154 3.488553 CGCCGGAAATCCTGAAATAAACC 60.489 47.826 5.05 0.00 0.00 3.27
2890 3155 3.181479 GCCGGAAATCCTGAAATAAACCC 60.181 47.826 5.05 0.00 0.00 4.11
2891 3156 3.066203 CCGGAAATCCTGAAATAAACCCG 59.934 47.826 0.00 0.00 0.00 5.28
2892 3157 3.066203 CGGAAATCCTGAAATAAACCCGG 59.934 47.826 0.00 0.00 0.00 5.73
2893 3158 4.021229 GGAAATCCTGAAATAAACCCGGT 58.979 43.478 0.00 0.00 0.00 5.28
2894 3159 5.195185 GGAAATCCTGAAATAAACCCGGTA 58.805 41.667 0.00 0.00 0.00 4.02
2895 3160 5.653330 GGAAATCCTGAAATAAACCCGGTAA 59.347 40.000 0.00 0.00 0.00 2.85
2896 3161 6.322969 GGAAATCCTGAAATAAACCCGGTAAT 59.677 38.462 0.00 0.00 0.00 1.89
2897 3162 7.503230 GGAAATCCTGAAATAAACCCGGTAATA 59.497 37.037 0.00 0.00 0.00 0.98
2898 3163 8.826293 AAATCCTGAAATAAACCCGGTAATAA 57.174 30.769 0.00 0.00 0.00 1.40
2899 3164 8.826293 AATCCTGAAATAAACCCGGTAATAAA 57.174 30.769 0.00 0.00 0.00 1.40
2900 3165 9.429109 AATCCTGAAATAAACCCGGTAATAAAT 57.571 29.630 0.00 0.00 0.00 1.40
2901 3166 8.228035 TCCTGAAATAAACCCGGTAATAAATG 57.772 34.615 0.00 0.00 0.00 2.32
2902 3167 6.921307 CCTGAAATAAACCCGGTAATAAATGC 59.079 38.462 0.00 0.00 0.00 3.56
2903 3168 6.496571 TGAAATAAACCCGGTAATAAATGCG 58.503 36.000 0.00 0.00 0.00 4.73
2904 3169 6.318144 TGAAATAAACCCGGTAATAAATGCGA 59.682 34.615 0.00 0.00 0.00 5.10
2905 3170 5.934935 ATAAACCCGGTAATAAATGCGAG 57.065 39.130 0.00 0.00 0.00 5.03
2906 3171 1.589803 ACCCGGTAATAAATGCGAGC 58.410 50.000 0.00 0.00 0.00 5.03
2907 3172 1.134340 ACCCGGTAATAAATGCGAGCA 60.134 47.619 0.00 0.00 0.00 4.26
2908 3173 1.263217 CCCGGTAATAAATGCGAGCAC 59.737 52.381 0.00 0.00 0.00 4.40
2909 3174 1.263217 CCGGTAATAAATGCGAGCACC 59.737 52.381 0.00 0.00 0.00 5.01
2910 3175 1.937223 CGGTAATAAATGCGAGCACCA 59.063 47.619 0.00 0.00 0.00 4.17
2911 3176 2.032894 CGGTAATAAATGCGAGCACCAG 60.033 50.000 0.00 0.00 0.00 4.00
2912 3177 2.290641 GGTAATAAATGCGAGCACCAGG 59.709 50.000 0.00 0.00 0.00 4.45
2913 3178 2.418368 AATAAATGCGAGCACCAGGA 57.582 45.000 0.00 0.00 0.00 3.86
2914 3179 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
2915 3180 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
2916 3181 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
2917 3182 0.813184 AATGCGAGCACCAGGATTTG 59.187 50.000 0.00 0.00 0.00 2.32
2918 3183 0.035152 ATGCGAGCACCAGGATTTGA 60.035 50.000 0.00 0.00 0.00 2.69
2919 3184 0.250684 TGCGAGCACCAGGATTTGAA 60.251 50.000 0.00 0.00 0.00 2.69
2920 3185 0.169009 GCGAGCACCAGGATTTGAAC 59.831 55.000 0.00 0.00 0.00 3.18
2921 3186 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
2922 3187 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
2923 3188 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
2938 3203 4.337474 CCTGATGGGCTGGGGATA 57.663 61.111 0.00 0.00 32.31 2.59
2939 3204 1.763770 CCTGATGGGCTGGGGATAC 59.236 63.158 0.00 0.00 32.31 2.24
2957 3222 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
2965 3230 3.009143 AGTCCCTCTAACCATTCAACCAC 59.991 47.826 0.00 0.00 0.00 4.16
2966 3231 2.983192 TCCCTCTAACCATTCAACCACA 59.017 45.455 0.00 0.00 0.00 4.17
2967 3232 3.009033 TCCCTCTAACCATTCAACCACAG 59.991 47.826 0.00 0.00 0.00 3.66
2969 3234 3.244911 CCTCTAACCATTCAACCACAGGT 60.245 47.826 0.00 0.00 37.65 4.00
2979 3244 2.600470 AACCACAGGTTGTTTGCATG 57.400 45.000 0.00 0.00 45.07 4.06
2980 3245 1.484038 ACCACAGGTTGTTTGCATGT 58.516 45.000 0.00 0.00 27.29 3.21
2981 3246 1.830477 ACCACAGGTTGTTTGCATGTT 59.170 42.857 0.00 0.00 27.29 2.71
2982 3247 2.203401 CCACAGGTTGTTTGCATGTTG 58.797 47.619 0.00 0.00 0.00 3.33
2983 3248 2.418471 CCACAGGTTGTTTGCATGTTGT 60.418 45.455 0.00 0.00 0.00 3.32
2984 3249 2.604011 CACAGGTTGTTTGCATGTTGTG 59.396 45.455 0.00 0.00 0.00 3.33
3005 3270 1.989165 CTTGACTCTAAGCACTCACGC 59.011 52.381 0.00 0.00 0.00 5.34
3006 3271 0.958822 TGACTCTAAGCACTCACGCA 59.041 50.000 0.00 0.00 0.00 5.24
3007 3272 1.339929 TGACTCTAAGCACTCACGCAA 59.660 47.619 0.00 0.00 0.00 4.85
3009 3274 1.613925 ACTCTAAGCACTCACGCAAGA 59.386 47.619 0.00 0.00 43.62 3.02
3010 3275 2.232452 ACTCTAAGCACTCACGCAAGAT 59.768 45.455 0.00 0.00 43.62 2.40
3011 3276 2.602211 CTCTAAGCACTCACGCAAGATG 59.398 50.000 0.00 0.00 43.62 2.90
3012 3277 1.662629 CTAAGCACTCACGCAAGATGG 59.337 52.381 0.00 0.00 43.62 3.51
3013 3278 0.035317 AAGCACTCACGCAAGATGGA 59.965 50.000 0.00 0.00 43.62 3.41
3014 3279 0.390866 AGCACTCACGCAAGATGGAG 60.391 55.000 0.00 0.00 43.62 3.86
3015 3280 1.975363 GCACTCACGCAAGATGGAGC 61.975 60.000 0.00 0.00 43.62 4.70
3016 3281 0.390866 CACTCACGCAAGATGGAGCT 60.391 55.000 0.00 0.00 43.62 4.09
3017 3282 0.390866 ACTCACGCAAGATGGAGCTG 60.391 55.000 0.00 0.00 43.62 4.24
3018 3283 1.078918 TCACGCAAGATGGAGCTGG 60.079 57.895 0.00 0.00 43.62 4.85
3019 3284 2.110967 CACGCAAGATGGAGCTGGG 61.111 63.158 0.00 0.00 43.62 4.45
3020 3285 3.207669 CGCAAGATGGAGCTGGGC 61.208 66.667 0.00 0.00 43.02 5.36
3021 3286 2.274760 GCAAGATGGAGCTGGGCT 59.725 61.111 0.00 0.00 43.88 5.19
3022 3287 2.119655 GCAAGATGGAGCTGGGCTG 61.120 63.158 0.00 0.00 39.88 4.85
3023 3288 1.605992 CAAGATGGAGCTGGGCTGA 59.394 57.895 0.00 0.00 39.88 4.26
3024 3289 0.747283 CAAGATGGAGCTGGGCTGAC 60.747 60.000 0.00 0.00 39.88 3.51
3025 3290 0.913451 AAGATGGAGCTGGGCTGACT 60.913 55.000 0.00 0.00 39.88 3.41
3026 3291 1.153208 GATGGAGCTGGGCTGACTG 60.153 63.158 0.00 0.00 39.88 3.51
3027 3292 1.614525 ATGGAGCTGGGCTGACTGA 60.615 57.895 0.00 0.00 39.88 3.41
3028 3293 0.987081 ATGGAGCTGGGCTGACTGAT 60.987 55.000 0.00 0.00 39.88 2.90
3029 3294 1.153208 GGAGCTGGGCTGACTGATG 60.153 63.158 0.00 0.00 39.88 3.07
3030 3295 1.153208 GAGCTGGGCTGACTGATGG 60.153 63.158 0.00 0.00 39.88 3.51
3031 3296 2.124403 GCTGGGCTGACTGATGGG 60.124 66.667 0.00 0.00 0.00 4.00
3032 3297 2.976490 GCTGGGCTGACTGATGGGT 61.976 63.158 0.00 0.00 0.00 4.51
3033 3298 1.687612 CTGGGCTGACTGATGGGTT 59.312 57.895 0.00 0.00 0.00 4.11
3034 3299 0.038744 CTGGGCTGACTGATGGGTTT 59.961 55.000 0.00 0.00 0.00 3.27
3035 3300 1.281867 CTGGGCTGACTGATGGGTTTA 59.718 52.381 0.00 0.00 0.00 2.01
3036 3301 1.707989 TGGGCTGACTGATGGGTTTAA 59.292 47.619 0.00 0.00 0.00 1.52
3037 3302 2.290896 TGGGCTGACTGATGGGTTTAAG 60.291 50.000 0.00 0.00 0.00 1.85
3038 3303 2.026262 GGGCTGACTGATGGGTTTAAGA 60.026 50.000 0.00 0.00 0.00 2.10
3039 3304 3.274288 GGCTGACTGATGGGTTTAAGAG 58.726 50.000 0.00 0.00 0.00 2.85
3040 3305 3.274288 GCTGACTGATGGGTTTAAGAGG 58.726 50.000 0.00 0.00 0.00 3.69
3041 3306 3.274288 CTGACTGATGGGTTTAAGAGGC 58.726 50.000 0.00 0.00 0.00 4.70
3042 3307 2.026262 TGACTGATGGGTTTAAGAGGCC 60.026 50.000 0.00 0.00 0.00 5.19
3043 3308 1.065418 ACTGATGGGTTTAAGAGGCCG 60.065 52.381 0.00 0.00 0.00 6.13
3044 3309 1.209504 CTGATGGGTTTAAGAGGCCGA 59.790 52.381 0.00 0.00 0.00 5.54
3045 3310 1.631388 TGATGGGTTTAAGAGGCCGAA 59.369 47.619 0.00 0.00 0.00 4.30
3046 3311 2.040545 TGATGGGTTTAAGAGGCCGAAA 59.959 45.455 0.00 0.00 0.00 3.46
3047 3312 2.891191 TGGGTTTAAGAGGCCGAAAT 57.109 45.000 0.00 0.00 0.00 2.17
3048 3313 4.080243 TGATGGGTTTAAGAGGCCGAAATA 60.080 41.667 0.00 0.00 0.00 1.40
3049 3314 3.613030 TGGGTTTAAGAGGCCGAAATAC 58.387 45.455 0.00 0.00 0.00 1.89
3050 3315 2.947652 GGGTTTAAGAGGCCGAAATACC 59.052 50.000 0.00 2.06 0.00 2.73
3051 3316 3.613030 GGTTTAAGAGGCCGAAATACCA 58.387 45.455 0.00 0.00 0.00 3.25
3052 3317 4.011698 GGTTTAAGAGGCCGAAATACCAA 58.988 43.478 0.00 0.00 0.00 3.67
3053 3318 4.643334 GGTTTAAGAGGCCGAAATACCAAT 59.357 41.667 0.00 0.00 0.00 3.16
3054 3319 5.824097 GGTTTAAGAGGCCGAAATACCAATA 59.176 40.000 0.00 0.00 0.00 1.90
3055 3320 6.238566 GGTTTAAGAGGCCGAAATACCAATAC 60.239 42.308 0.00 0.00 0.00 1.89
3056 3321 4.772886 AAGAGGCCGAAATACCAATACT 57.227 40.909 0.00 0.00 0.00 2.12
3057 3322 4.073293 AGAGGCCGAAATACCAATACTG 57.927 45.455 0.00 0.00 0.00 2.74
3058 3323 3.709653 AGAGGCCGAAATACCAATACTGA 59.290 43.478 0.00 0.00 0.00 3.41
3059 3324 3.805207 AGGCCGAAATACCAATACTGAC 58.195 45.455 0.00 0.00 0.00 3.51
3060 3325 2.542595 GGCCGAAATACCAATACTGACG 59.457 50.000 0.00 0.00 0.00 4.35
3061 3326 2.542595 GCCGAAATACCAATACTGACGG 59.457 50.000 0.00 0.00 40.60 4.79
3062 3327 3.128349 CCGAAATACCAATACTGACGGG 58.872 50.000 0.00 0.00 35.24 5.28
3063 3328 2.542595 CGAAATACCAATACTGACGGGC 59.457 50.000 0.00 0.00 0.00 6.13
3064 3329 3.740141 CGAAATACCAATACTGACGGGCT 60.740 47.826 0.00 0.00 0.00 5.19
3065 3330 2.910688 ATACCAATACTGACGGGCTG 57.089 50.000 0.00 0.00 0.00 4.85
3066 3331 1.855295 TACCAATACTGACGGGCTGA 58.145 50.000 0.00 0.00 0.00 4.26
3067 3332 0.981183 ACCAATACTGACGGGCTGAA 59.019 50.000 0.00 0.00 0.00 3.02
3068 3333 1.349688 ACCAATACTGACGGGCTGAAA 59.650 47.619 0.00 0.00 0.00 2.69
3069 3334 2.224670 ACCAATACTGACGGGCTGAAAA 60.225 45.455 0.00 0.00 0.00 2.29
3070 3335 3.016736 CCAATACTGACGGGCTGAAAAT 58.983 45.455 0.00 0.00 0.00 1.82
3071 3336 4.196193 CCAATACTGACGGGCTGAAAATA 58.804 43.478 0.00 0.00 0.00 1.40
3072 3337 4.035208 CCAATACTGACGGGCTGAAAATAC 59.965 45.833 0.00 0.00 0.00 1.89
3073 3338 1.722011 ACTGACGGGCTGAAAATACG 58.278 50.000 0.00 0.00 0.00 3.06
3074 3339 1.006832 CTGACGGGCTGAAAATACGG 58.993 55.000 0.00 0.00 0.00 4.02
3075 3340 0.609151 TGACGGGCTGAAAATACGGA 59.391 50.000 0.00 0.00 0.00 4.69
3076 3341 1.004595 GACGGGCTGAAAATACGGAC 58.995 55.000 0.00 0.00 0.00 4.79
3077 3342 0.611714 ACGGGCTGAAAATACGGACT 59.388 50.000 0.00 0.00 0.00 3.85
3078 3343 1.006832 CGGGCTGAAAATACGGACTG 58.993 55.000 0.00 0.00 0.00 3.51
3079 3344 1.404986 CGGGCTGAAAATACGGACTGA 60.405 52.381 0.00 0.00 32.63 3.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.843334 GTTCAATTTCGTTATTATTACAACCCA 57.157 29.630 0.00 0.00 0.00 4.51
72 73 9.598517 AGAAGCAAAAATGATCAAACTAACAAA 57.401 25.926 0.00 0.00 0.00 2.83
78 79 9.985730 TCAAATAGAAGCAAAAATGATCAAACT 57.014 25.926 0.00 0.00 0.00 2.66
99 100 9.486497 TGCACAAACAACATATACATTTCAAAT 57.514 25.926 0.00 0.00 0.00 2.32
100 101 8.877808 TGCACAAACAACATATACATTTCAAA 57.122 26.923 0.00 0.00 0.00 2.69
101 102 8.877808 TTGCACAAACAACATATACATTTCAA 57.122 26.923 0.00 0.00 0.00 2.69
102 103 8.140628 ACTTGCACAAACAACATATACATTTCA 58.859 29.630 0.00 0.00 0.00 2.69
103 104 8.519492 ACTTGCACAAACAACATATACATTTC 57.481 30.769 0.00 0.00 0.00 2.17
104 105 8.140628 TGACTTGCACAAACAACATATACATTT 58.859 29.630 0.00 0.00 0.00 2.32
105 106 7.594758 GTGACTTGCACAAACAACATATACATT 59.405 33.333 0.00 0.00 46.91 2.71
106 107 7.083858 GTGACTTGCACAAACAACATATACAT 58.916 34.615 0.00 0.00 46.91 2.29
107 108 6.434596 GTGACTTGCACAAACAACATATACA 58.565 36.000 0.00 0.00 46.91 2.29
108 109 6.911484 GTGACTTGCACAAACAACATATAC 57.089 37.500 0.00 0.00 46.91 1.47
127 128 4.741781 AATTGCAGCGCGCGTGAC 62.742 61.111 32.35 20.33 46.97 3.67
128 129 2.997621 AAAAATTGCAGCGCGCGTGA 62.998 50.000 32.35 13.71 46.97 4.35
129 130 2.647381 AAAAATTGCAGCGCGCGTG 61.647 52.632 32.35 26.47 46.97 5.34
130 131 2.354539 AAAAATTGCAGCGCGCGT 60.355 50.000 32.35 15.53 46.97 6.01
144 145 2.748532 CCGCTCCAATAACGGGTAAAAA 59.251 45.455 0.00 0.00 43.23 1.94
145 146 2.358015 CCGCTCCAATAACGGGTAAAA 58.642 47.619 0.00 0.00 43.23 1.52
146 147 2.013058 GCCGCTCCAATAACGGGTAAA 61.013 52.381 2.57 0.00 46.97 2.01
147 148 0.462403 GCCGCTCCAATAACGGGTAA 60.462 55.000 2.57 0.00 46.97 2.85
148 149 1.144496 GCCGCTCCAATAACGGGTA 59.856 57.895 2.57 0.00 46.97 3.69
149 150 2.124860 GCCGCTCCAATAACGGGT 60.125 61.111 2.57 0.00 46.97 5.28
150 151 3.269347 CGCCGCTCCAATAACGGG 61.269 66.667 2.57 0.00 46.97 5.28
152 153 4.279535 CGCGCCGCTCCAATAACG 62.280 66.667 7.78 0.00 0.00 3.18
170 171 4.275282 GCTAAAATGCAGCGCGAG 57.725 55.556 12.10 1.41 0.00 5.03
175 176 2.951227 GCCGCGCTAAAATGCAGC 60.951 61.111 5.56 0.00 35.61 5.25
176 177 1.584483 CAGCCGCGCTAAAATGCAG 60.584 57.895 5.56 0.00 36.40 4.41
177 178 1.861542 AACAGCCGCGCTAAAATGCA 61.862 50.000 5.56 0.00 36.40 3.96
178 179 1.154035 AACAGCCGCGCTAAAATGC 60.154 52.632 5.56 0.00 36.40 3.56
179 180 0.798009 CCAACAGCCGCGCTAAAATG 60.798 55.000 5.56 0.00 36.40 2.32
180 181 0.958382 TCCAACAGCCGCGCTAAAAT 60.958 50.000 5.56 0.00 36.40 1.82
181 182 1.573829 CTCCAACAGCCGCGCTAAAA 61.574 55.000 5.56 0.00 36.40 1.52
182 183 2.031314 TCCAACAGCCGCGCTAAA 59.969 55.556 5.56 0.00 36.40 1.85
183 184 2.434185 CTCCAACAGCCGCGCTAA 60.434 61.111 5.56 0.00 36.40 3.09
206 207 3.416382 TTTTACGCGGCCGTCAGC 61.416 61.111 28.70 8.89 46.39 4.26
207 208 2.472934 GTTTTACGCGGCCGTCAG 59.527 61.111 28.70 20.40 46.39 3.51
208 209 3.043121 GGTTTTACGCGGCCGTCA 61.043 61.111 28.70 9.37 46.39 4.35
209 210 3.018840 CTGGTTTTACGCGGCCGTC 62.019 63.158 28.70 18.03 46.39 4.79
211 212 3.795342 CCTGGTTTTACGCGGCCG 61.795 66.667 24.05 24.05 41.14 6.13
212 213 4.111016 GCCTGGTTTTACGCGGCC 62.111 66.667 12.47 4.99 34.75 6.13
213 214 4.454717 CGCCTGGTTTTACGCGGC 62.455 66.667 12.47 0.00 40.91 6.53
214 215 2.319096 TTCGCCTGGTTTTACGCGG 61.319 57.895 12.47 0.00 44.56 6.46
215 216 1.154543 GTTCGCCTGGTTTTACGCG 60.155 57.895 3.53 3.53 45.76 6.01
216 217 1.154543 CGTTCGCCTGGTTTTACGC 60.155 57.895 0.00 0.00 0.00 4.42
217 218 1.494189 CCGTTCGCCTGGTTTTACG 59.506 57.895 0.00 0.95 0.00 3.18
218 219 1.208358 GCCGTTCGCCTGGTTTTAC 59.792 57.895 0.00 0.00 0.00 2.01
219 220 2.319096 CGCCGTTCGCCTGGTTTTA 61.319 57.895 0.00 0.00 0.00 1.52
220 221 3.656045 CGCCGTTCGCCTGGTTTT 61.656 61.111 0.00 0.00 0.00 2.43
234 235 3.677099 AATTAGTTTGCCGCGCGCC 62.677 57.895 27.36 16.11 36.24 6.53
235 236 1.341369 AAAATTAGTTTGCCGCGCGC 61.341 50.000 27.36 23.91 38.31 6.86
236 237 1.056869 AAAAATTAGTTTGCCGCGCG 58.943 45.000 25.67 25.67 0.00 6.86
237 238 2.027569 GCTAAAAATTAGTTTGCCGCGC 59.972 45.455 0.00 0.00 0.00 6.86
238 239 2.275253 CGCTAAAAATTAGTTTGCCGCG 59.725 45.455 0.00 0.00 33.67 6.46
239 240 2.027569 GCGCTAAAAATTAGTTTGCCGC 59.972 45.455 0.00 2.84 35.62 6.53
240 241 2.275253 CGCGCTAAAAATTAGTTTGCCG 59.725 45.455 5.56 4.72 0.00 5.69
241 242 2.027569 GCGCGCTAAAAATTAGTTTGCC 59.972 45.455 26.67 0.00 0.00 4.52
242 243 2.283672 CGCGCGCTAAAAATTAGTTTGC 60.284 45.455 30.48 0.00 0.00 3.68
243 244 2.275253 CCGCGCGCTAAAAATTAGTTTG 59.725 45.455 30.48 7.74 0.00 2.93
244 245 2.511879 CCGCGCGCTAAAAATTAGTTT 58.488 42.857 30.48 0.00 0.00 2.66
245 246 1.792632 GCCGCGCGCTAAAAATTAGTT 60.793 47.619 30.48 0.00 0.00 2.24
246 247 0.247934 GCCGCGCGCTAAAAATTAGT 60.248 50.000 30.48 0.00 0.00 2.24
247 248 2.480593 GCCGCGCGCTAAAAATTAG 58.519 52.632 30.48 9.83 0.00 1.73
248 249 4.674496 GCCGCGCGCTAAAAATTA 57.326 50.000 30.48 0.00 0.00 1.40
268 269 4.389576 CTCCAACAGGCGCGCAAC 62.390 66.667 34.42 17.03 0.00 4.17
269 270 3.899981 ATCTCCAACAGGCGCGCAA 62.900 57.895 34.42 7.45 0.00 4.85
270 271 4.393155 ATCTCCAACAGGCGCGCA 62.393 61.111 34.42 9.24 0.00 6.09
271 272 3.869272 CATCTCCAACAGGCGCGC 61.869 66.667 25.94 25.94 0.00 6.86
272 273 3.869272 GCATCTCCAACAGGCGCG 61.869 66.667 0.00 0.00 0.00 6.86
273 274 2.437359 AGCATCTCCAACAGGCGC 60.437 61.111 0.00 0.00 0.00 6.53
274 275 3.805267 GAGCATCTCCAACAGGCG 58.195 61.111 0.00 0.00 0.00 5.52
291 292 0.106708 TTATGGGCAGCTCCGCTTAG 59.893 55.000 0.00 0.00 36.40 2.18
317 318 2.601314 CGATGTTTCGTCATAAGCCGAA 59.399 45.455 0.00 0.00 40.94 4.30
396 397 4.585216 ATTATCCGGGGGCGGGGA 62.585 66.667 0.00 0.00 36.61 4.81
548 549 5.829924 AGTGGGCTGAATTCATTTGTATAGG 59.170 40.000 8.96 0.00 0.00 2.57
551 552 5.587388 CAGTGGGCTGAATTCATTTGTAT 57.413 39.130 8.96 0.00 45.28 2.29
622 623 3.304190 GGTTTCGTCGGCTGTTGTTAATT 60.304 43.478 0.00 0.00 0.00 1.40
658 659 2.103042 GTCATGGAGCGGCAGTGTC 61.103 63.158 1.45 0.00 0.00 3.67
661 662 1.450848 CATGTCATGGAGCGGCAGT 60.451 57.895 4.78 0.00 0.00 4.40
689 690 6.665992 TGTTTACTACTCTTGGTGTCTCAT 57.334 37.500 0.00 0.00 0.00 2.90
848 857 0.737804 TGCATTGTGTGTGTGGTGAC 59.262 50.000 0.00 0.00 0.00 3.67
905 928 1.073923 TGAGGAAAGGGAGTGGCTTTC 59.926 52.381 0.00 0.00 36.63 2.62
985 1036 2.338015 CCATTGCCGCTGCTTGAGT 61.338 57.895 0.70 0.00 38.71 3.41
1654 1735 1.015109 CACGCGCTAGTTAGAGAGGA 58.985 55.000 5.73 0.00 0.00 3.71
1715 1797 2.878406 CCAAATCCGTCCATCCATACAC 59.122 50.000 0.00 0.00 0.00 2.90
1716 1798 2.507886 ACCAAATCCGTCCATCCATACA 59.492 45.455 0.00 0.00 0.00 2.29
1718 1800 2.748132 GCACCAAATCCGTCCATCCATA 60.748 50.000 0.00 0.00 0.00 2.74
1722 1804 0.734889 CTGCACCAAATCCGTCCATC 59.265 55.000 0.00 0.00 0.00 3.51
1728 1810 1.402968 CCAAGATCTGCACCAAATCCG 59.597 52.381 0.00 0.00 0.00 4.18
1901 2039 9.122779 GTCTCTAACTAGTCCTAGATTTGCTAA 57.877 37.037 8.29 0.00 36.97 3.09
1904 2042 7.576861 AGTCTCTAACTAGTCCTAGATTTGC 57.423 40.000 8.29 0.00 36.07 3.68
1919 2060 8.704234 CGGAAGCATGAATAATTAGTCTCTAAC 58.296 37.037 13.58 6.69 0.00 2.34
1944 2095 6.348295 CCATGATCATCAAGCTTAATTCCTCG 60.348 42.308 4.86 0.00 0.00 4.63
2107 2308 4.347430 CGATGAACGACAGGATTCCATCC 61.347 52.174 5.29 0.00 46.68 3.51
2108 2309 2.797156 CGATGAACGACAGGATTCCATC 59.203 50.000 5.29 1.25 45.77 3.51
2109 2310 2.430694 TCGATGAACGACAGGATTCCAT 59.569 45.455 5.29 0.00 46.45 3.41
2193 2408 1.821241 CTGAAGGACACACACACGCG 61.821 60.000 3.53 3.53 0.00 6.01
2194 2409 0.810031 ACTGAAGGACACACACACGC 60.810 55.000 0.00 0.00 0.00 5.34
2214 2431 3.235195 CACTAGTAACGCTGACACACTC 58.765 50.000 0.00 0.00 0.00 3.51
2262 2479 5.293560 ACCGAAATTTACACATTTTGGGTG 58.706 37.500 14.35 0.00 46.35 4.61
2275 2492 5.945466 GGAACCACAAGTACCGAAATTTA 57.055 39.130 0.00 0.00 0.00 1.40
2355 2602 3.677148 GCACTCCACTTGAAGATCGATCA 60.677 47.826 26.47 5.58 0.00 2.92
2379 2626 4.037858 ACGGGACAAGTATCGATGTAAC 57.962 45.455 8.54 0.00 0.00 2.50
2396 2643 5.351948 AATCCCAAATATTTTGGAACGGG 57.648 39.130 21.31 16.14 42.06 5.28
2472 2722 9.976511 GTACTGTATATTTAATGGTGTAGAGCA 57.023 33.333 0.00 0.00 0.00 4.26
2473 2723 9.976511 TGTACTGTATATTTAATGGTGTAGAGC 57.023 33.333 0.00 0.00 0.00 4.09
2552 2806 4.499037 AGGTTTTAGAAAATGTGCCGAC 57.501 40.909 0.00 0.00 0.00 4.79
2554 2808 3.428534 GCAAGGTTTTAGAAAATGTGCCG 59.571 43.478 8.13 0.00 31.38 5.69
2557 2811 6.738114 TCTGAGCAAGGTTTTAGAAAATGTG 58.262 36.000 0.00 0.00 0.00 3.21
2559 2813 7.373493 ACATCTGAGCAAGGTTTTAGAAAATG 58.627 34.615 0.00 0.00 0.00 2.32
2560 2814 7.530426 ACATCTGAGCAAGGTTTTAGAAAAT 57.470 32.000 0.00 0.00 0.00 1.82
2568 2822 6.064717 ACTTCTTTACATCTGAGCAAGGTTT 58.935 36.000 0.00 0.00 0.00 3.27
2569 2823 5.625150 ACTTCTTTACATCTGAGCAAGGTT 58.375 37.500 0.00 0.00 0.00 3.50
2571 2825 6.205464 TCAAACTTCTTTACATCTGAGCAAGG 59.795 38.462 0.00 0.00 0.00 3.61
2694 2959 5.728344 GCTTGCGTCTGTACTGTGTTAAAAA 60.728 40.000 0.00 0.00 0.00 1.94
2695 2960 4.260456 GCTTGCGTCTGTACTGTGTTAAAA 60.260 41.667 0.00 0.00 0.00 1.52
2696 2961 3.246699 GCTTGCGTCTGTACTGTGTTAAA 59.753 43.478 0.00 0.00 0.00 1.52
2697 2962 2.798283 GCTTGCGTCTGTACTGTGTTAA 59.202 45.455 0.00 0.00 0.00 2.01
2698 2963 2.400399 GCTTGCGTCTGTACTGTGTTA 58.600 47.619 0.00 0.00 0.00 2.41
2699 2964 1.217882 GCTTGCGTCTGTACTGTGTT 58.782 50.000 0.00 0.00 0.00 3.32
2700 2965 0.939577 CGCTTGCGTCTGTACTGTGT 60.940 55.000 6.86 0.00 0.00 3.72
2701 2966 1.775344 CGCTTGCGTCTGTACTGTG 59.225 57.895 6.86 0.00 0.00 3.66
2702 2967 2.022129 GCGCTTGCGTCTGTACTGT 61.022 57.895 16.38 0.00 0.00 3.55
2703 2968 1.678269 GAGCGCTTGCGTCTGTACTG 61.678 60.000 13.26 0.00 45.69 2.74
2704 2969 1.444553 GAGCGCTTGCGTCTGTACT 60.445 57.895 13.26 3.73 45.69 2.73
2705 2970 1.078759 ATGAGCGCTTGCGTCTGTAC 61.079 55.000 13.26 0.00 45.69 2.90
2706 2971 0.454196 TATGAGCGCTTGCGTCTGTA 59.546 50.000 13.26 6.26 45.69 2.74
2707 2972 0.179100 ATATGAGCGCTTGCGTCTGT 60.179 50.000 13.26 7.66 45.69 3.41
2708 2973 1.453524 GTATATGAGCGCTTGCGTCTG 59.546 52.381 13.26 0.00 45.69 3.51
2709 2974 1.067060 TGTATATGAGCGCTTGCGTCT 59.933 47.619 13.26 13.17 45.69 4.18
2710 2975 1.190323 GTGTATATGAGCGCTTGCGTC 59.810 52.381 13.26 12.36 45.69 5.19
2711 2976 1.209128 GTGTATATGAGCGCTTGCGT 58.791 50.000 13.26 3.24 45.69 5.24
2712 2977 1.071239 GTGTGTATATGAGCGCTTGCG 60.071 52.381 13.26 10.90 45.69 4.85
2713 2978 1.933181 TGTGTGTATATGAGCGCTTGC 59.067 47.619 13.26 0.00 39.58 4.01
2714 2979 2.929398 TGTGTGTGTATATGAGCGCTTG 59.071 45.455 13.26 0.00 0.00 4.01
2715 2980 3.245518 TGTGTGTGTATATGAGCGCTT 57.754 42.857 13.26 0.00 0.00 4.68
2716 2981 2.959507 TGTGTGTGTATATGAGCGCT 57.040 45.000 11.27 11.27 0.00 5.92
2717 2982 3.428870 GGTATGTGTGTGTATATGAGCGC 59.571 47.826 0.00 0.00 0.00 5.92
2718 2983 4.444388 GTGGTATGTGTGTGTATATGAGCG 59.556 45.833 0.00 0.00 0.00 5.03
2719 2984 5.601662 AGTGGTATGTGTGTGTATATGAGC 58.398 41.667 0.00 0.00 0.00 4.26
2720 2985 6.805713 TGAGTGGTATGTGTGTGTATATGAG 58.194 40.000 0.00 0.00 0.00 2.90
2721 2986 6.783708 TGAGTGGTATGTGTGTGTATATGA 57.216 37.500 0.00 0.00 0.00 2.15
2722 2987 6.646653 GGATGAGTGGTATGTGTGTGTATATG 59.353 42.308 0.00 0.00 0.00 1.78
2723 2988 6.239600 GGGATGAGTGGTATGTGTGTGTATAT 60.240 42.308 0.00 0.00 0.00 0.86
2724 2989 5.069914 GGGATGAGTGGTATGTGTGTGTATA 59.930 44.000 0.00 0.00 0.00 1.47
2725 2990 4.141711 GGGATGAGTGGTATGTGTGTGTAT 60.142 45.833 0.00 0.00 0.00 2.29
2726 2991 3.196901 GGGATGAGTGGTATGTGTGTGTA 59.803 47.826 0.00 0.00 0.00 2.90
2727 2992 2.027192 GGGATGAGTGGTATGTGTGTGT 60.027 50.000 0.00 0.00 0.00 3.72
2728 2993 2.237143 AGGGATGAGTGGTATGTGTGTG 59.763 50.000 0.00 0.00 0.00 3.82
2729 2994 2.551270 AGGGATGAGTGGTATGTGTGT 58.449 47.619 0.00 0.00 0.00 3.72
2730 2995 4.344968 TCATAGGGATGAGTGGTATGTGTG 59.655 45.833 0.00 0.00 37.15 3.82
2731 2996 4.556697 TCATAGGGATGAGTGGTATGTGT 58.443 43.478 0.00 0.00 37.15 3.72
2732 2997 5.300752 GTTCATAGGGATGAGTGGTATGTG 58.699 45.833 0.00 0.00 43.03 3.21
2733 2998 4.039245 CGTTCATAGGGATGAGTGGTATGT 59.961 45.833 0.00 0.00 43.03 2.29
2734 2999 4.560128 CGTTCATAGGGATGAGTGGTATG 58.440 47.826 0.00 0.00 43.03 2.39
2735 3000 3.006967 GCGTTCATAGGGATGAGTGGTAT 59.993 47.826 0.00 0.00 43.03 2.73
2736 3001 2.364324 GCGTTCATAGGGATGAGTGGTA 59.636 50.000 0.00 0.00 43.03 3.25
2737 3002 1.139058 GCGTTCATAGGGATGAGTGGT 59.861 52.381 0.00 0.00 43.03 4.16
2738 3003 1.138859 TGCGTTCATAGGGATGAGTGG 59.861 52.381 0.00 0.00 43.03 4.00
2739 3004 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
2740 3005 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
2741 3006 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
2742 3007 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
2743 3008 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
2744 3009 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
2745 3010 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
2746 3011 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
2747 3012 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
2748 3013 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
2749 3014 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
2750 3015 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
2751 3016 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
2752 3017 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
2753 3018 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
2754 3019 4.830765 AGGTGTGCGTGTGTGCGT 62.831 61.111 0.00 0.00 37.81 5.24
2755 3020 4.000557 GAGGTGTGCGTGTGTGCG 62.001 66.667 0.00 0.00 37.81 5.34
2756 3021 3.649986 GGAGGTGTGCGTGTGTGC 61.650 66.667 0.00 0.00 0.00 4.57
2757 3022 0.320334 TATGGAGGTGTGCGTGTGTG 60.320 55.000 0.00 0.00 0.00 3.82
2758 3023 0.037326 CTATGGAGGTGTGCGTGTGT 60.037 55.000 0.00 0.00 0.00 3.72
2759 3024 0.740868 CCTATGGAGGTGTGCGTGTG 60.741 60.000 0.00 0.00 38.16 3.82
2760 3025 0.902984 TCCTATGGAGGTGTGCGTGT 60.903 55.000 0.00 0.00 44.19 4.49
2761 3026 0.460284 GTCCTATGGAGGTGTGCGTG 60.460 60.000 0.00 0.00 44.19 5.34
2762 3027 0.614979 AGTCCTATGGAGGTGTGCGT 60.615 55.000 0.00 0.00 44.19 5.24
2763 3028 0.179100 CAGTCCTATGGAGGTGTGCG 60.179 60.000 0.00 0.00 44.19 5.34
2764 3029 1.137872 CTCAGTCCTATGGAGGTGTGC 59.862 57.143 0.00 0.00 44.19 4.57
2765 3030 1.137872 GCTCAGTCCTATGGAGGTGTG 59.862 57.143 0.00 0.00 44.19 3.82
2766 3031 1.490574 GCTCAGTCCTATGGAGGTGT 58.509 55.000 0.00 0.00 44.19 4.16
2767 3032 0.755686 GGCTCAGTCCTATGGAGGTG 59.244 60.000 0.00 0.00 44.19 4.00
2768 3033 0.757188 CGGCTCAGTCCTATGGAGGT 60.757 60.000 0.00 0.00 44.19 3.85
2769 3034 1.467678 CCGGCTCAGTCCTATGGAGG 61.468 65.000 0.00 0.00 45.35 4.30
2770 3035 2.045280 CCGGCTCAGTCCTATGGAG 58.955 63.158 0.00 0.00 29.39 3.86
2771 3036 2.134287 GCCGGCTCAGTCCTATGGA 61.134 63.158 22.15 0.00 0.00 3.41
2772 3037 1.762522 ATGCCGGCTCAGTCCTATGG 61.763 60.000 29.70 0.00 0.00 2.74
2773 3038 0.969149 TATGCCGGCTCAGTCCTATG 59.031 55.000 29.70 0.00 0.00 2.23
2774 3039 1.827969 GATATGCCGGCTCAGTCCTAT 59.172 52.381 29.70 12.57 0.00 2.57
2775 3040 1.257743 GATATGCCGGCTCAGTCCTA 58.742 55.000 29.70 4.25 0.00 2.94
2776 3041 0.760567 TGATATGCCGGCTCAGTCCT 60.761 55.000 29.70 4.90 0.00 3.85
2777 3042 0.322975 ATGATATGCCGGCTCAGTCC 59.677 55.000 29.70 12.19 0.00 3.85
2778 3043 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
2779 3044 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2780 3045 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2781 3046 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2782 3047 2.462456 TCAAGATGATATGCCGGCTC 57.538 50.000 29.70 17.89 0.00 4.70
2783 3048 2.936919 TTCAAGATGATATGCCGGCT 57.063 45.000 29.70 15.76 0.00 5.52
2784 3049 4.510038 AATTTCAAGATGATATGCCGGC 57.490 40.909 22.73 22.73 0.00 6.13
2785 3050 6.073276 TCGTAAATTTCAAGATGATATGCCGG 60.073 38.462 0.00 0.00 0.00 6.13
2786 3051 6.887368 TCGTAAATTTCAAGATGATATGCCG 58.113 36.000 0.00 0.00 0.00 5.69
2787 3052 9.683069 AATTCGTAAATTTCAAGATGATATGCC 57.317 29.630 0.00 0.00 30.79 4.40
2792 3057 7.910162 CGGTGAATTCGTAAATTTCAAGATGAT 59.090 33.333 0.04 0.00 35.21 2.45
2793 3058 7.094975 ACGGTGAATTCGTAAATTTCAAGATGA 60.095 33.333 0.04 0.00 39.22 2.92
2794 3059 7.021196 ACGGTGAATTCGTAAATTTCAAGATG 58.979 34.615 0.04 0.00 39.22 2.90
2795 3060 7.141100 ACGGTGAATTCGTAAATTTCAAGAT 57.859 32.000 0.04 0.00 39.22 2.40
2796 3061 6.548441 ACGGTGAATTCGTAAATTTCAAGA 57.452 33.333 0.04 0.00 39.22 3.02
2797 3062 6.959311 CCTACGGTGAATTCGTAAATTTCAAG 59.041 38.462 0.04 0.00 41.62 3.02
2798 3063 6.621164 GCCTACGGTGAATTCGTAAATTTCAA 60.621 38.462 0.04 0.00 41.62 2.69
2799 3064 5.163834 GCCTACGGTGAATTCGTAAATTTCA 60.164 40.000 0.04 0.00 41.62 2.69
2800 3065 5.163834 TGCCTACGGTGAATTCGTAAATTTC 60.164 40.000 0.04 0.00 41.62 2.17
2801 3066 4.696402 TGCCTACGGTGAATTCGTAAATTT 59.304 37.500 0.04 0.00 41.62 1.82
2802 3067 4.093850 GTGCCTACGGTGAATTCGTAAATT 59.906 41.667 0.04 0.00 41.62 1.82
2803 3068 3.619929 GTGCCTACGGTGAATTCGTAAAT 59.380 43.478 0.04 0.00 41.62 1.40
2804 3069 2.995258 GTGCCTACGGTGAATTCGTAAA 59.005 45.455 0.04 0.00 41.62 2.01
2805 3070 2.609350 GTGCCTACGGTGAATTCGTAA 58.391 47.619 0.04 0.00 41.62 3.18
2806 3071 1.135024 GGTGCCTACGGTGAATTCGTA 60.135 52.381 0.04 0.00 41.38 3.43
2807 3072 0.390735 GGTGCCTACGGTGAATTCGT 60.391 55.000 0.04 0.00 43.64 3.85
2808 3073 0.108329 AGGTGCCTACGGTGAATTCG 60.108 55.000 0.04 0.00 0.00 3.34
2809 3074 1.653151 GAGGTGCCTACGGTGAATTC 58.347 55.000 0.00 0.00 0.00 2.17
2810 3075 0.108329 CGAGGTGCCTACGGTGAATT 60.108 55.000 0.00 0.00 0.00 2.17
2811 3076 1.255667 ACGAGGTGCCTACGGTGAAT 61.256 55.000 12.22 0.00 0.00 2.57
2812 3077 1.870055 GACGAGGTGCCTACGGTGAA 61.870 60.000 12.22 0.00 0.00 3.18
2813 3078 2.282674 ACGAGGTGCCTACGGTGA 60.283 61.111 12.22 0.00 0.00 4.02
2814 3079 1.945354 ATGACGAGGTGCCTACGGTG 61.945 60.000 12.22 0.00 0.00 4.94
2815 3080 1.664321 GATGACGAGGTGCCTACGGT 61.664 60.000 12.22 3.01 0.00 4.83
2816 3081 1.065928 GATGACGAGGTGCCTACGG 59.934 63.158 12.22 0.36 0.00 4.02
2817 3082 1.298413 CGATGACGAGGTGCCTACG 60.298 63.158 0.00 0.00 42.66 3.51
2818 3083 2.104267 TCGATGACGAGGTGCCTAC 58.896 57.895 0.00 0.00 43.81 3.18
2819 3084 4.649845 TCGATGACGAGGTGCCTA 57.350 55.556 0.00 0.00 43.81 3.93
2827 3092 0.167470 GACGTTCCTGTCGATGACGA 59.833 55.000 13.23 0.00 46.56 4.20
2828 3093 0.168348 AGACGTTCCTGTCGATGACG 59.832 55.000 0.00 0.00 43.70 4.35
2829 3094 1.467713 GGAGACGTTCCTGTCGATGAC 60.468 57.143 8.87 0.00 43.70 3.06
2830 3095 0.809385 GGAGACGTTCCTGTCGATGA 59.191 55.000 8.87 0.00 43.70 2.92
2831 3096 3.330766 GGAGACGTTCCTGTCGATG 57.669 57.895 8.87 0.00 43.70 3.84
2840 3105 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
2841 3106 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
2842 3107 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
2843 3108 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
2844 3109 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
2845 3110 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
2846 3111 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
2847 3112 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
2848 3113 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
2849 3114 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
2850 3115 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
2851 3116 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
2862 3127 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
2863 3128 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
2864 3129 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
2865 3130 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
2866 3131 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
2867 3132 3.488553 GGTTTATTTCAGGATTTCCGGCG 60.489 47.826 0.00 0.00 42.08 6.46
2868 3133 3.181479 GGGTTTATTTCAGGATTTCCGGC 60.181 47.826 0.00 0.00 42.08 6.13
2869 3134 3.066203 CGGGTTTATTTCAGGATTTCCGG 59.934 47.826 0.00 0.00 42.08 5.14
2870 3135 3.066203 CCGGGTTTATTTCAGGATTTCCG 59.934 47.826 0.00 0.00 42.08 4.30
2871 3136 4.021229 ACCGGGTTTATTTCAGGATTTCC 58.979 43.478 6.32 0.00 0.00 3.13
2872 3137 6.762702 TTACCGGGTTTATTTCAGGATTTC 57.237 37.500 4.31 0.00 0.00 2.17
2873 3138 8.826293 TTATTACCGGGTTTATTTCAGGATTT 57.174 30.769 4.31 0.00 0.00 2.17
2874 3139 8.826293 TTTATTACCGGGTTTATTTCAGGATT 57.174 30.769 4.31 0.00 0.00 3.01
2875 3140 8.856103 CATTTATTACCGGGTTTATTTCAGGAT 58.144 33.333 4.31 0.00 0.00 3.24
2876 3141 7.201839 GCATTTATTACCGGGTTTATTTCAGGA 60.202 37.037 4.31 0.00 0.00 3.86
2877 3142 6.921307 GCATTTATTACCGGGTTTATTTCAGG 59.079 38.462 4.31 0.00 0.00 3.86
2878 3143 6.635239 CGCATTTATTACCGGGTTTATTTCAG 59.365 38.462 4.31 0.00 0.00 3.02
2879 3144 6.318144 TCGCATTTATTACCGGGTTTATTTCA 59.682 34.615 4.31 0.00 0.00 2.69
2880 3145 6.727215 TCGCATTTATTACCGGGTTTATTTC 58.273 36.000 4.31 0.00 0.00 2.17
2881 3146 6.696441 TCGCATTTATTACCGGGTTTATTT 57.304 33.333 4.31 0.00 0.00 1.40
2882 3147 5.278120 GCTCGCATTTATTACCGGGTTTATT 60.278 40.000 4.31 0.00 0.00 1.40
2883 3148 4.214758 GCTCGCATTTATTACCGGGTTTAT 59.785 41.667 4.31 2.18 0.00 1.40
2884 3149 3.560896 GCTCGCATTTATTACCGGGTTTA 59.439 43.478 4.31 0.00 0.00 2.01
2885 3150 2.356695 GCTCGCATTTATTACCGGGTTT 59.643 45.455 4.31 0.00 0.00 3.27
2886 3151 1.944709 GCTCGCATTTATTACCGGGTT 59.055 47.619 4.31 0.00 0.00 4.11
2887 3152 1.134340 TGCTCGCATTTATTACCGGGT 60.134 47.619 6.32 4.46 0.00 5.28
2888 3153 1.263217 GTGCTCGCATTTATTACCGGG 59.737 52.381 6.32 0.00 0.00 5.73
2889 3154 1.263217 GGTGCTCGCATTTATTACCGG 59.737 52.381 0.00 0.00 0.00 5.28
2890 3155 1.937223 TGGTGCTCGCATTTATTACCG 59.063 47.619 0.00 0.00 0.00 4.02
2891 3156 2.290641 CCTGGTGCTCGCATTTATTACC 59.709 50.000 0.00 0.00 0.00 2.85
2892 3157 3.202906 TCCTGGTGCTCGCATTTATTAC 58.797 45.455 0.00 0.00 0.00 1.89
2893 3158 3.552132 TCCTGGTGCTCGCATTTATTA 57.448 42.857 0.00 0.00 0.00 0.98
2894 3159 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
2895 3160 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
2896 3161 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
2897 3162 1.203052 CAAATCCTGGTGCTCGCATTT 59.797 47.619 0.00 0.00 0.00 2.32
2898 3163 0.813184 CAAATCCTGGTGCTCGCATT 59.187 50.000 0.00 0.00 0.00 3.56
2899 3164 0.035152 TCAAATCCTGGTGCTCGCAT 60.035 50.000 0.00 0.00 0.00 4.73
2900 3165 0.250684 TTCAAATCCTGGTGCTCGCA 60.251 50.000 0.00 0.00 0.00 5.10
2901 3166 0.169009 GTTCAAATCCTGGTGCTCGC 59.831 55.000 0.00 0.00 0.00 5.03
2902 3167 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
2903 3168 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
2904 3169 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
2905 3170 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
2921 3186 1.763770 GTATCCCCAGCCCATCAGG 59.236 63.158 0.00 0.00 39.47 3.86
2922 3187 1.061905 TGGTATCCCCAGCCCATCAG 61.062 60.000 0.00 0.00 38.72 2.90
2923 3188 1.005423 TGGTATCCCCAGCCCATCA 59.995 57.895 0.00 0.00 38.72 3.07
2924 3189 1.352622 TGTGGTATCCCCAGCCCATC 61.353 60.000 0.00 0.00 46.45 3.51
2925 3190 1.308657 TGTGGTATCCCCAGCCCAT 60.309 57.895 0.00 0.00 46.45 4.00
2926 3191 2.000701 CTGTGGTATCCCCAGCCCA 61.001 63.158 0.00 0.00 46.45 5.36
2927 3192 1.984288 GACTGTGGTATCCCCAGCCC 61.984 65.000 0.00 0.00 46.45 5.19
2928 3193 1.527370 GACTGTGGTATCCCCAGCC 59.473 63.158 0.00 0.00 46.45 4.85
2929 3194 1.527370 GGACTGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
2934 3199 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
2935 3200 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
2936 3201 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
2937 3202 3.484953 ATGGTTAGAGGGACTGTGGTA 57.515 47.619 0.00 0.00 41.55 3.25
2938 3203 2.344093 ATGGTTAGAGGGACTGTGGT 57.656 50.000 0.00 0.00 41.55 4.16
2939 3204 2.571653 TGAATGGTTAGAGGGACTGTGG 59.428 50.000 0.00 0.00 41.55 4.17
2940 3205 3.981071 TGAATGGTTAGAGGGACTGTG 57.019 47.619 0.00 0.00 41.55 3.66
2941 3206 3.009143 GGTTGAATGGTTAGAGGGACTGT 59.991 47.826 0.00 0.00 41.55 3.55
2942 3207 3.009033 TGGTTGAATGGTTAGAGGGACTG 59.991 47.826 0.00 0.00 41.55 3.51
2944 3209 3.244770 TGTGGTTGAATGGTTAGAGGGAC 60.245 47.826 0.00 0.00 0.00 4.46
2945 3210 2.983192 TGTGGTTGAATGGTTAGAGGGA 59.017 45.455 0.00 0.00 0.00 4.20
2946 3211 3.347216 CTGTGGTTGAATGGTTAGAGGG 58.653 50.000 0.00 0.00 0.00 4.30
2947 3212 3.244911 ACCTGTGGTTGAATGGTTAGAGG 60.245 47.826 0.00 0.00 27.29 3.69
2948 3213 4.021102 ACCTGTGGTTGAATGGTTAGAG 57.979 45.455 0.00 0.00 27.29 2.43
2949 3214 4.447138 AACCTGTGGTTGAATGGTTAGA 57.553 40.909 0.71 0.00 45.07 2.10
2985 3250 1.989165 GCGTGAGTGCTTAGAGTCAAG 59.011 52.381 0.00 0.00 0.00 3.02
2986 3251 1.339929 TGCGTGAGTGCTTAGAGTCAA 59.660 47.619 0.00 0.00 35.36 3.18
2987 3252 0.958822 TGCGTGAGTGCTTAGAGTCA 59.041 50.000 0.00 0.00 35.36 3.41
2988 3253 1.989165 CTTGCGTGAGTGCTTAGAGTC 59.011 52.381 0.00 0.00 35.36 3.36
2989 3254 1.613925 TCTTGCGTGAGTGCTTAGAGT 59.386 47.619 0.00 0.00 35.36 3.24
2990 3255 2.354109 TCTTGCGTGAGTGCTTAGAG 57.646 50.000 0.00 0.00 35.36 2.43
2991 3256 2.610433 CATCTTGCGTGAGTGCTTAGA 58.390 47.619 0.00 0.00 35.36 2.10
2992 3257 1.662629 CCATCTTGCGTGAGTGCTTAG 59.337 52.381 0.00 0.00 35.36 2.18
2993 3258 1.275010 TCCATCTTGCGTGAGTGCTTA 59.725 47.619 0.00 0.00 35.36 3.09
2994 3259 0.035317 TCCATCTTGCGTGAGTGCTT 59.965 50.000 0.00 0.00 35.36 3.91
2995 3260 0.390866 CTCCATCTTGCGTGAGTGCT 60.391 55.000 0.00 0.00 35.36 4.40
2996 3261 1.975363 GCTCCATCTTGCGTGAGTGC 61.975 60.000 0.00 0.00 0.00 4.40
2997 3262 0.390866 AGCTCCATCTTGCGTGAGTG 60.391 55.000 0.00 0.00 0.00 3.51
2998 3263 0.390866 CAGCTCCATCTTGCGTGAGT 60.391 55.000 0.00 0.00 0.00 3.41
2999 3264 1.088340 CCAGCTCCATCTTGCGTGAG 61.088 60.000 0.00 0.00 0.00 3.51
3000 3265 1.078918 CCAGCTCCATCTTGCGTGA 60.079 57.895 0.00 0.00 0.00 4.35
3001 3266 2.110967 CCCAGCTCCATCTTGCGTG 61.111 63.158 0.00 0.00 0.00 5.34
3002 3267 2.270205 CCCAGCTCCATCTTGCGT 59.730 61.111 0.00 0.00 0.00 5.24
3003 3268 3.207669 GCCCAGCTCCATCTTGCG 61.208 66.667 0.00 0.00 0.00 4.85
3004 3269 2.119655 CAGCCCAGCTCCATCTTGC 61.120 63.158 0.00 0.00 36.40 4.01
3005 3270 0.747283 GTCAGCCCAGCTCCATCTTG 60.747 60.000 0.00 0.00 36.40 3.02
3006 3271 0.913451 AGTCAGCCCAGCTCCATCTT 60.913 55.000 0.00 0.00 36.40 2.40
3007 3272 1.306825 AGTCAGCCCAGCTCCATCT 60.307 57.895 0.00 0.00 36.40 2.90
3008 3273 1.153208 CAGTCAGCCCAGCTCCATC 60.153 63.158 0.00 0.00 36.40 3.51
3009 3274 0.987081 ATCAGTCAGCCCAGCTCCAT 60.987 55.000 0.00 0.00 36.40 3.41
3010 3275 1.614525 ATCAGTCAGCCCAGCTCCA 60.615 57.895 0.00 0.00 36.40 3.86
3011 3276 1.153208 CATCAGTCAGCCCAGCTCC 60.153 63.158 0.00 0.00 36.40 4.70
3012 3277 1.153208 CCATCAGTCAGCCCAGCTC 60.153 63.158 0.00 0.00 36.40 4.09
3013 3278 2.677289 CCCATCAGTCAGCCCAGCT 61.677 63.158 0.00 0.00 40.77 4.24
3014 3279 2.124403 CCCATCAGTCAGCCCAGC 60.124 66.667 0.00 0.00 0.00 4.85
3015 3280 0.038744 AAACCCATCAGTCAGCCCAG 59.961 55.000 0.00 0.00 0.00 4.45
3016 3281 1.367346 TAAACCCATCAGTCAGCCCA 58.633 50.000 0.00 0.00 0.00 5.36
3017 3282 2.026262 TCTTAAACCCATCAGTCAGCCC 60.026 50.000 0.00 0.00 0.00 5.19
3018 3283 3.274288 CTCTTAAACCCATCAGTCAGCC 58.726 50.000 0.00 0.00 0.00 4.85
3019 3284 3.274288 CCTCTTAAACCCATCAGTCAGC 58.726 50.000 0.00 0.00 0.00 4.26
3020 3285 3.274288 GCCTCTTAAACCCATCAGTCAG 58.726 50.000 0.00 0.00 0.00 3.51
3021 3286 2.026262 GGCCTCTTAAACCCATCAGTCA 60.026 50.000 0.00 0.00 0.00 3.41
3022 3287 2.644676 GGCCTCTTAAACCCATCAGTC 58.355 52.381 0.00 0.00 0.00 3.51
3023 3288 1.065418 CGGCCTCTTAAACCCATCAGT 60.065 52.381 0.00 0.00 0.00 3.41
3024 3289 1.209504 TCGGCCTCTTAAACCCATCAG 59.790 52.381 0.00 0.00 0.00 2.90
3025 3290 1.281419 TCGGCCTCTTAAACCCATCA 58.719 50.000 0.00 0.00 0.00 3.07
3026 3291 2.413310 TTCGGCCTCTTAAACCCATC 57.587 50.000 0.00 0.00 0.00 3.51
3027 3292 2.891191 TTTCGGCCTCTTAAACCCAT 57.109 45.000 0.00 0.00 0.00 4.00
3028 3293 2.891191 ATTTCGGCCTCTTAAACCCA 57.109 45.000 0.00 0.00 0.00 4.51
3029 3294 2.947652 GGTATTTCGGCCTCTTAAACCC 59.052 50.000 0.00 0.00 0.00 4.11
3030 3295 3.613030 TGGTATTTCGGCCTCTTAAACC 58.387 45.455 0.00 1.96 0.00 3.27
3031 3296 5.830000 ATTGGTATTTCGGCCTCTTAAAC 57.170 39.130 0.00 0.00 0.00 2.01
3032 3297 6.540914 CAGTATTGGTATTTCGGCCTCTTAAA 59.459 38.462 0.00 0.00 0.00 1.52
3033 3298 6.053005 CAGTATTGGTATTTCGGCCTCTTAA 58.947 40.000 0.00 0.00 0.00 1.85
3034 3299 5.364446 TCAGTATTGGTATTTCGGCCTCTTA 59.636 40.000 0.00 0.00 0.00 2.10
3035 3300 4.163458 TCAGTATTGGTATTTCGGCCTCTT 59.837 41.667 0.00 0.00 0.00 2.85
3036 3301 3.709653 TCAGTATTGGTATTTCGGCCTCT 59.290 43.478 0.00 0.00 0.00 3.69
3037 3302 3.808174 GTCAGTATTGGTATTTCGGCCTC 59.192 47.826 0.00 0.00 0.00 4.70
3038 3303 3.740141 CGTCAGTATTGGTATTTCGGCCT 60.740 47.826 0.00 0.00 0.00 5.19
3039 3304 2.542595 CGTCAGTATTGGTATTTCGGCC 59.457 50.000 0.00 0.00 0.00 6.13
3040 3305 2.542595 CCGTCAGTATTGGTATTTCGGC 59.457 50.000 0.00 0.00 0.00 5.54
3041 3306 3.128349 CCCGTCAGTATTGGTATTTCGG 58.872 50.000 0.00 0.00 36.00 4.30
3042 3307 2.542595 GCCCGTCAGTATTGGTATTTCG 59.457 50.000 0.00 0.00 0.00 3.46
3043 3308 3.560068 CAGCCCGTCAGTATTGGTATTTC 59.440 47.826 0.00 0.00 0.00 2.17
3044 3309 3.199071 TCAGCCCGTCAGTATTGGTATTT 59.801 43.478 0.00 0.00 0.00 1.40
3045 3310 2.769663 TCAGCCCGTCAGTATTGGTATT 59.230 45.455 0.00 0.00 0.00 1.89
3046 3311 2.394632 TCAGCCCGTCAGTATTGGTAT 58.605 47.619 0.00 0.00 0.00 2.73
3047 3312 1.855295 TCAGCCCGTCAGTATTGGTA 58.145 50.000 0.00 0.00 0.00 3.25
3048 3313 0.981183 TTCAGCCCGTCAGTATTGGT 59.019 50.000 0.00 0.00 0.00 3.67
3049 3314 2.107950 TTTCAGCCCGTCAGTATTGG 57.892 50.000 0.00 0.00 0.00 3.16
3050 3315 4.260212 CGTATTTTCAGCCCGTCAGTATTG 60.260 45.833 0.00 0.00 0.00 1.90
3051 3316 3.869246 CGTATTTTCAGCCCGTCAGTATT 59.131 43.478 0.00 0.00 0.00 1.89
3052 3317 3.454375 CGTATTTTCAGCCCGTCAGTAT 58.546 45.455 0.00 0.00 0.00 2.12
3053 3318 2.417651 CCGTATTTTCAGCCCGTCAGTA 60.418 50.000 0.00 0.00 0.00 2.74
3054 3319 1.674817 CCGTATTTTCAGCCCGTCAGT 60.675 52.381 0.00 0.00 0.00 3.41
3055 3320 1.006832 CCGTATTTTCAGCCCGTCAG 58.993 55.000 0.00 0.00 0.00 3.51
3056 3321 0.609151 TCCGTATTTTCAGCCCGTCA 59.391 50.000 0.00 0.00 0.00 4.35
3057 3322 1.004595 GTCCGTATTTTCAGCCCGTC 58.995 55.000 0.00 0.00 0.00 4.79
3058 3323 0.611714 AGTCCGTATTTTCAGCCCGT 59.388 50.000 0.00 0.00 0.00 5.28
3059 3324 1.006832 CAGTCCGTATTTTCAGCCCG 58.993 55.000 0.00 0.00 0.00 6.13
3060 3325 2.396590 TCAGTCCGTATTTTCAGCCC 57.603 50.000 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.