>input_sequence_61348
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-------------------ATGGAGGGCAAGGAGGAGGACGTGCGGCTGGGCGCCAACCGGTACTCGGAGCGGCAGCCGA
TCGGGACGGCGGCGCAGGGCGGCGGCGCGGACGACAAGGACTACAAGGAGCCGCCGCCGGCGCCGCTGTTCGAGGCGGAG
GAGCTGACGTCGTGGTCCTTCTACCGCGCGGGGATCGCCGAGTTCCTGGCCACCTTCCTGTTCCTGTACATCAGCGTGCT
CACGGTGATGGGCGTGGTGGGCA------ACCCCTCCGGCTCCAAG---------------TGCGGCACCGTGGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCCGTCACCTTCGGGCTGTTCTTGGCCAGGAAGCTGTCGCTCACCCGGGCCGTGTTCTACATGGTGATGCAGTGCCT
GGGGGCCATCTGCGGCGCCGGGGTGGTGAAGGGGTTCCAGACCACGCTGTACATGGGCAACGGCGGCGGCGCCAACTCGG
TGGCGCCGGGGTACACCAAGGGGGACGGCCTGGGGGCGGAGATCGTGGGGACCTTTGTGCTCGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTACACCGTCCTCTCTAA-CTAGCGCGTGGAATA
TATCATTTCGTGGATGATGACCAAATTAACTGATGTGTGTATGGATGGACGGATTTG-----------------------
---------------------------------GTGCAGATCTTGGCGCCGCTGCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACCGGCACCGGCATCAACCCGGCGCGCTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGTCGTGGGACGACCACGTAAGAAGAATCAATTAATTAGCAAATCTAGGAC---TAG----------TTAGAGACTA
ATTATTCATGCTTCCGAGGAATTA---AGCTTGATGATCATGGTTTTGGACA----------------------------
-------------------TGCAGTGGATCTTCTGGGTGGGCCCGTTCACCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGACTAG----------------------------------------
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----------------------------------------------------------------
>chr5B_1_TraesCS5B01G178700
ATTGTACTGAACGATAAACTATTTGTTTGGGTTGTAATAATAACGAAATTGAACTATTTATTGTTGATTTATTTTGTTAG
TTTGATCATTTTTGCTTCTATTTGAAATGTATATGTTGTTTGTGCAAGTCACGCGCGCTGCAATTTTTTACCCGTTATTG
GAGCGGCGCGCTCGCGCTGCATTTTAGCGCGGCTGTTGGAGCCAGCGCTGACGGCCGCGTAAAACCAGGCGAACGGCGCG
CGGCAAACTAATTTTTAGCGCGCGGCGCGTTGCGCGCCTGTTGGAGATGCTCTAAGCGGAGCTGCCCATAAGCTACATTC
GGCTTATGACGAAACATCGACTATGGTTGCATGTATGTTTATTTTAAGTTTTTGGTTATTATTATTATCCTTCTAGTCCC
CGCCCCCGGATAATGACCAATATATATAAGATTAAAACATAGAACCTGTGTTGCAACCTTTTGGAAGCACTACCTGTCCG
TGTCTGTCTAGCAACTAGTACTAGCTAGAACAAAAAGGACACCACTTTCTGCTCTCATAATGCAAAATCCTATACAAATG
AATTCAGCCCACTGATCAATAGTATCTTATCACCGACTTAAACTAGTATACTAAGTATCTGCAATTAACAACAGCCGACG
AAACCATTCGATACCACAGACACTGCCGCTCCATGACATGGAAGGTGAGATGAGACACCAAGAGTAGTAAACAAGCCACA
ACAATTTCATAGACCAACTAATAGAACTAATAAAGTACCATCACTGGGCCACTAATCAGTAAACCAAACCCGCCCCCTAT
CATCATCCACTAATGAACAAGTGGCAGCAAAGGCAAAATAAGC--------ACATTG--------TCAC----CACACAC
ACAATGCAGAGCGACCATGATTGACC--CCCGCTATAAGAAGCACTCGAAAGCCACTCCCTTTCCTCATCTC--------
TCTCTCGCACACCCATCCATCATCATCT-----CCTCTGCCTAA--------------CAAGCTAAGCAGCTG-AACTC-
-----AAGCA---GCGGCAATGGAGGGCAAGGAGGAGGACGTGCGGCTGGGCGCCAACCGGTACTCGGAGCGGCAGCCGA
TCGGGACGGCGGCGCAGGGCGGCGGCGCGGACGACAAGGACTACAAGGAGCCGCCGCCGGCGCCGCTGTTCGAGGCGGAG
GAGCTGACGTCGTGGTCCTTCTACCGCGCGGGGATCGCCGAGTTCCTGGCCACCTTCCTGTTCCTGTACATCAGCGTGCT
CACGGTGATGGGCGTGGTGGGCA------ACCCCTCCGGCTCCAAG---------------TGCGGCACCGTGGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCCGTCACCTTCGGGCTGTTCTTGGCCAGGAAGCTGTCGCTCACCCGGGCCGTGTTCTACATGGTGATGCAGTGCCT
GGGGGCCATCTGCGGCGCCGGGGTGGTGAAGGGGTTCCAGACCACGCTGTACATGGGCAACGGCGGCGGCGCCAACTCGG
TGGCGCCGGGGTACACCAAGGGGGACGGCCTGGGGGCGGAGATCGTGGGGACCTTTGTGCTCGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTACACCGTCCTCTCTAA-CTAGCGCGTGGAATA
TATCATTTCGTGGATGATGACCAAATTAACTGATGTGTGTATGGATGGACGGATTTG-----------------------
---------------------------------GTGCAGATCTTGGCGCCGCTGCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACCGGCACCGGCATCAACCCGGCGCGCTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGTCGTGGGACGACCACGTAAGAAGAATCAATTAATTAGCAAATCTAGGAC---TAG----------TTAGAGACTA
ATTATTCATGCTTCCGAGGAATTA---AGCTTGATGATCATGGTTTTGGACA----------------------------
-------------------TGCAGTGGATCTTCTGGGTGGGCCCGTTCACCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGACTAGTAAACTCAATCAGCCATGGAATGGAATGGATGGAATCCTG
TCGTTCATCGACCATCGTTTGTGCTGATCGTTG--------------CTCCTGTAATTACCGGTCTGCCGTACTGTTCCT
GAGCGAGCGCGT--GTGTGTGTCCTTCAGTGAGTGTGTCAGCGTTACTAGTGTGGTCAGTGCACTTCTTCACCGCACCCA
CCCAAAATGTGTAAATT-TCGGTACTTGTGGTTCCCTCTCTTTTGTAAGCA-----------------------------
AAACGTGTGTATAAAATAACAAGGAATGAAGATCGAATTAATGATCGATCTTCAAGTGGAGTGCTGTTACATCGATACTT
GTCCCGTTCCAAAATATTTGGGATTTCTGGGTTTGTACTAAGTCAAACTTC-TTTAGTTTGACTAACTTTAT--AAAAAA
ATGC----TCTACACCATTAAATATACAGTACATGATGAAAATATAGGTTAATGACACTAAATAAGCTAATTTGATGTTG
TAGATGTCGGCACATTTTCTAAAACCTTGCTCAGATGTAAAGAAGTTTGATTTAAGACAAACCTAAAACTTCAAGTCTTT
TGAAATGAAATAAGTA-----------CATATGAAAATAAAATGTTCTCTATATGTGTGTCATGTTGTGCTTAACTTTTT
TTTAACACAGTACAGACGCAAGCGCTCATATACACACACATACCACTCATCCCTATGAACGCACACACGCACACCTCCAT
AGGACTGAGCCGGCATATCATCTTGAAATTTACGAATTCACCGTAGGCACCTCGTCATCGACAGGAACGTCTCCTCCCAC
TGAATGCGCATCGCCGGAAATCCTGAAATAAACCCGGTAATAAATGCGAGCACCAGGATTTGAACCCTGATGGGCTGGGG
ATACCACAGTCCCTCTAACCATTCAACCACAGGTTGTTTGCATGTTGTGCTTGACTCTAAGCACTCACGCAAGATGGAGC
TGGGCTGACTGATGGGTTTAAGAGGCCGAAATACCAATACTGACGGGCTGAAAATACGGACTGA
>chr5A_288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TGCTGTAAGCGGAGCTGCGCATAAGTTACACTC
GGCTTATGACGAAACATCAGCTATGGTTGCATGTATGTTTATTTTAAGTTTTCGGTTATTATTATTATCCCT----CCCC
CGCCTG-GGATAATGACCAATATATATAAGATTAAAACATAGAACCTGTGTTGCAACCTTTTGGAAGCACTACATGTCCG
TGTCTGTCTAGCAACTAGTACTAGCTGGAACAAAAAGGACACCACTTTCTGCTCTCATAATGCAAGATTCTGTACAAATG
AATTCAGCCCACTGATCAATATTATCTTATCACCGACTTAAACTAGTATACTAAGTATCTGCTATTAACAACAGCCGACG
AAACCATTCGATACCACAAACTCTGCCGCTCCATGACATGGAAGGTGAGGTGAGACGCCCAGAGTAGTAAACAAGCCACA
ACAATTTCATAGACCAACTAATAGAACTAATAAAGTGCCATCACTGGGCCACTAATCAGTAAACCAAACCCGCCCCCTAT
CATCATCCACTAATCAACAAGTGGCAGCAAAGGCAAAATAAGC--------ACATTATCAGTTTATCAC----CACACAC
ACAATGCAGAGCAACCATGATTGACC--CCCGCTATAAGAAGCGCTCCAAAGCCACTCCCTTTCCTCATCTC--------
TCTCTCGCACACCCATCCATCATCATCTCATCTCCTCTGCCTAA--------------CAGGCTAAGCAGCTG-AGCTC-
-----AAGCA---GCGGCAATGGAGGGCAAGGAGGAGGACGTGCGTCTGGGCGCCAACCGGTACTCGGAGCGGCAGCCGA
TCGGAACGGCAGCGCAG------GGCGCGGACGACAAGGACTACAAGGAGCCGCCGCCGGCGCCGCTGTTCGAGGCGGAG
GAGCTGACGTCGTGGTCCTTCTACCGCGCGGGGATCGCCGAGTTCCTGGCCACCTTCCTGTTCCTGTACATCAGCGTGCT
CACGGTGATGGGCGTGGTGGGCA------ACCCCTCCGGCTCCAAG---------------TGCGGCACCGTGGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCCGTCACCTTCGGGCTGTTCCTGGCCAGGAAGCTGTCGCTCACCCGGGCCGTGTTCTACATGGTGATGCAGTGCCT
GGGGGCCATCTGCGGCGCCGGGGTGGTGAAGGGGTTCCAGACCACGCTGTACATGGGCAACGGCGGCGGCGCCAACTCGG
TGGCGCCGGGGTACACCAAGGGCGACGGCCTGGGGGCGGAGATCGTGGGGACCTTCGTGCTCGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTGCACCGGCCTCTCTAA-CTAGCGCGTGGAACA
TATCATTTCGTGGATGATGAACAAATTAACTGATGT--------ATGGATGGATTCG-----------------------
---------------------------------GTGCAGATCCTGGCGCCGCTGCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACCGGCACCGGCATCAACCCGGCGCGCTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGTCGTGGGACGACCACGTAAGAAGAATCACTTAACTAACAAAACTAGGAC---TATCAGTCACTACTTAGAGACTA
ATTATTCATGCTTGGGAGGAATTA---AGCTTGATGATCATGGTTTTGGGCA----------------------------
-------------------TGCAGTGGATCTTCTGGGTGGGCCCGTTCACCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGGCTAGCATACTCAATCGGCCATGGAACGGA-----TGGAATCCTA
TCGTTCATCGACCATCGTTTGTGCTGATCGTTGCTCCTGCGTGAGTACTCCTGTAACTATCGGTCTGCCGTACTGTTCCT
GAGCGAG--CGAGCGTGTGTGTCCTTCAGTCGGTGTGTCAGCGTTACAAGTGTG----GTGCACTTCTTCACCGCGCCTA
CCCAAAATGTGCAAATT-TCGGTACTTGTGGTTCCCTCTCTTTTGTAAGCA-----------------------------
AAATGCGTGTATAAAATAACAAGGAATGAAGATCGAATTAACGATCGATCTTCAACTGGAGTGCTATTACATCGATACTT
GTTCCGTTCCAAAACATTTGGGATTTCTGGGTTTGTACTAAGTCAAACTTGTTTAAGTTTGACTAACTTTAC--AAAAAA
TGCTAATATCTACACCATTAAATATATGTTA------------------TAATGACACTGATTAAGCTAATTTGATGTTG
TAGATATTGGAAAGTTTTCTATTAACTTGGTCAGATGTAAAGAAGTTTGACTTAAGACAAACCTAAAACTTCAAGCCTTT
TGAAATAAATTAAGTGCATATGTGTGTCATATGAAAATAAAATGTTCTCTATATGTGTGTCATGCTCTGCTT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------
>chr5D_288
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------TGCTGTAAGCGGAGCTGCCCATGAGCTACACTC
GGCTTAGGACGAAACATCGACTATGGTTGCATGTATGTTTATTTTAAGTTTTCGGTTATTATTATTATCCCTCTAGCCCC
CGCCCT-GGATAATGACCAATATATATAAGATTAAAACATAGAACCTGTGTTGCAACCTTTTGGAAGCACTACCTGTCCG
TGTCTGTCTAGCAACTAGTACTAGCTAGAACAAAAAGGACACCACTTTCTGCTCTCATAATGCAAAATTCTGTACAAATG
AATTCAGCCCACTGAACAATATTGTCGTATCACCGACTTAAACTAGTATACTAAGTATCTGCTATTAACAACAGCCGACG
AAACCATTCGATACCACAAACTCTGCCGCTCCATGACATGGAAGGTGAGGTGAGACACCAAGAGTAGTAAACAAGCCACA
ACAATTTCAT-GACCAACTAATAGAACTAATAAAGTACCATCACTGGGCCACTAATCAGTAAACCAAGCCCGCCCCCTAT
CATCATCCACTAATGAACTAGTGGCAGCAAAGGCAAAATAAGC--------ACATTATCAC--CACACACACACACACAC
ACAATGCAGAGCAGCCATGATTGACC--CCCGCTATAAGAAGCACTCCAAAGCCACTCCCTTTCCTCATCTC--------
TCTCTCGCACACCCATCCATCATC-----ATCTCCTCTGCCTAA--------------CAAGCTAAGCAGCTG-AGCTC-
-----AAGCA---GCGGCAATGGAGGGCAAGGAGGAGGACGTGCGTCTGGGCGCGAACCGGTACTCGGAGCGGCAGCCGA
TCGGGACGGCGGCGCAGGGCGGCGGTGCGGACGACAAGGACTACAAGGAGCCGCCGCCGGCGCCGCTGTTCGAGGCGGAG
GAGCTGACGTCGTGGTCCTTCTACCGCGCGGGGATCGCCGAGTTCCTGGCCACCTTCCTGTTCCTGTACATCAGCGTGCT
CACGGTGATGGGCGTGGTGGGCA------ACCCCTCCGGCTCCAAG---------------TGCGGCACCGTGGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCCGTCACCTTCGGGCTCTTCTTGGCCAGGAAGCTGTCGCTCACCCGGGCCGTGTTCTACATGGTGATGCAGTGCCT
GGGGGCCATCTGCGGCGCCGGGGTGGTGAAGGGGTTCCAGACCACGCTGTACATGGGCAACGGCGGCGGCGCCAACTCGG
TGGCGCCGGGGTACACCAAGGGCGACGGCCTGGGGGCGGAGATCGTGGGGACCTTTGTGCTCGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTGCACCGGCCTCTCTTAGCTAGCCCGTGGAACA
TATCATTTCGTGGATGATGACCAAATTAACTG--------ATGTATGGATGGATTTG-----------------------
---------------------------------ATGCAGATCTTGGCGCCGCTGCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACCGGCACCGGCATCAACCCGGCGCGCTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGTCGTGGGACGACCACGTAAGAAGGATCACTTAACTAACAAAACTAGGAC---TATCAGTCACTACTTAGAGGCTA
ATTATTCATGCTTCGGAAGAATTA---AGCTTGATGATCATGG-TTTGAACA----------------------------
-------------------TGCAGTGGATCTTCTGGGTGGGCCCGTTCACTGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGACTAGTATACTCAATCAGCCATGGGATGGAAATT-TGGAATCCTA
TCGTTCATCGACCATCATTTGTGCTGATCGTTGCTCCTGCGTGCGTACTCCTGTAATTATCGGTCTGCCGTACTGTTCCT
GAGCGAG--CGT--GTGTGTGTCCTTCAGTCAGTGTGTCAGCGTTACTAGTGTGGTCAGTGCACTTCTTCACCGCACCTA
CCCAAAATGTGCAAACTATCGGTACTTGTGGTTCCCTCTCTTTTGTAAGCAATGCGTGTATAAAATATTCCCGCGAAAAA
AAATGCGTGTATAAAATAACAAGGAATGAAGATCGAACTAACGATCGATCTTCAAGTGGAGTGCTATTACATCGATACTT
GTTCCGTTCCAAAATATTTGGGATTTCTGGGTTTGTACAAAGTAAAACTTCTTTAAGTTTCACTAACTTTTATAAAAAAA
TGCTAATATCTACACCATTAGATATA------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------
>chr6D_802
--------------------------------------------------------------------------------
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-ATCATCCACTAATCAAGAAGTGGCAGCAAAAATTAAACCAAGAAAACAAAACATTATCATCACACACACAC-----CAT
GCATAGTAGAGCAGCCATGATTGA----CCCTCTATAAGAAGCTCTCCAAAGACACTCCCTCTCCTCATCTCTCTCTCTC
TCTCACACACACACACACATCATC-----TCCTCCGCCTCT------C--AACCAA------GC--------CAAGAGCT
CAGTGAAGCACCACCGGCCATGGAGGGCAAGGAGGAGGACGTGCGCCTGGGCGCGAACCGCTACTCGGAGCGCCAGCCCA
TCGGCACGGCGGCGCAGGGCGGCGGCGCGGACGAGAAGGACTACAAGGAGCCGCCCCCGGCCCCGCTCTTCGAGGCGGAG
GAGCTCACCTCCTGGTCCTTCTACCGGGCCGGGATCGCCGAGTTCCTGGCCACCTTCCTCTTCCTCTACATCTCGGTGCT
CACCGTGATGGGCGTGGTGGGCA------ACCCTTCGGGGTCCAAG---------------TGCGGCACGGTCGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCGGTCACCTTCGGGCTGTTTTTGGCAAGGAAGCTGTCGCTCACCAGGGCCGTGTTCTACATGGTGATGCAGTGCCT
GGGCGCGATATGCGGGGCTGGGGTTGTCAAGGGGTTCCAGACCACGCTGTACCAGGGCAACGGCGGCGGCGCCAACTCCG
TCGCGCCCGGGTACACCAAGGGGGACGGCCTCGGGGCCGAGATCGTCGGCACGTTCGTGCTGGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTACA--T---------ACGTGC--------ATA
CAGTGCACCGGT-GGCCGGCAGCGGCCACCG---------TGTTTGGTTTTGTC----------A--------ACGACTG
ACGAATTGAA----------------------ATTGCAGATCCTGGCCCCGCTTCCGATCGGATTCGCGGTGTTTCTGGT
GCACCTGGCGACGATCCCCATCACGGGCACCGGCATCAACCCGGCGAGGTCGCTGGGCGCCGCCATCATCTACAACAAGA
AGCAGGCGTGGGACGACCATGTAAGAA---TCAATTTAATATCAATCATTCATCAG---T----------TAATTACTCG
ACCGTGCATGCTTAGGAAGAATCAAAGAGCTTGATGATGATCATGCATGTTTTGGAGCTAGCTAGAGACTAATCAG----
--TGATGTTTTTGGCATTGAGCAGTGGATCTTCTGGGTTGGCCCGTTCATCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCCGGGCGATCCCCTTCAAGAGCCGCGACTAGTCC-------------------------------------
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-----------------ACCAATCA-------------------------------------------------------
----------------------------------------------------------------
>chr6B_802
--------------------------------------------------------------------------------
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-ATCATCCACTAATCAAGAAGTGGCAGCAAAAAATAGACCAAGAAAACAAAACATTATCAT--CACACACAC-----CAT
GCATAGTAGAGCAGCCATGATTGGCTGGCCCTCTATAAGAAGCTCTCCAAAGACACTCCCTCTCCTCATCTC--------
TCCCTCTCACACACACACATCATC-----TCCTCCACCTCT------CTCAACCAAGCCAAGGC--------CAAGAGCT
GAGTGAAGCACCCGCGGCCATGGAGGGCAAGGAGGAGGACGTGCGGCTGGGCGCGAACCGCTACTCGGAGCACCAGCCCA
TCGGCACGGCGGCGCAGGGCGGCGGCGCGGACGAGAAGGACTACAAGGAGCCGCCCCCGGCCCCCTTCTTCGAGGCCGGG
GAGCTCACCTCCTGGTCCTTCTACCGGGCCGGCATCGCCGAGTTCCTGGCCACCTTCCTCTTCCTCTACATCTCGGTGCT
CACCGTGATGGGCGTGGTGGGCA------ACCCGTCGGGGTCCAAG---------------TGCGGCACGGTCGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCGGTCACCTTCGGGCTGTTCCTGGCCAGGAAGCTGTCGCTCACCAGGGCGGTGTTCTACATCGTGATGCAGTGCCT
GGGGGCCATATGCGGCGCTGGGGTTGTCAAGGGGTTCCAGACCACGCTGTACCAGGGCAACGGCGGCGGCGCCAACTCCG
TCGCGCCGGGGTACACCAAGGGGGACGGGCTTGGGGCTGAGATTGTTGGGACGTTCGTGCTGGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTAGTCCTATGAACTATATGCAG--------ATA
CAGTGCATCGGCAGGCCGGCGGCGACAACCGTTCT-----TGTTTGGTTTGGGC----------G--------GTGA---
---------AACTAATCAAAGCCGGTGGGAAACATGCAGATTTTGGCGCCGCTTCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCCACGATCCCCATCACGGGCACCGGCATCAACCCGGCGAGGTCCCTGGGCGCCGCCATCATCTACAACAAGA
AGCAGGCGTGGGACGACCACGTAAGTAGAATCAACATCCTCC----------AC---CAT----------TATTGGCTCG
ACCGTG---------------TTA---AGCTTGATGATGATTATGGTTACGAGCTGCG--------ACTAATCTCATGGA
CATGATCTGATTGAAATTGTGCAGTGGATCTTCTGGGTGGGTCCGTTCATCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGACTAGTCC-------------------------------------
--------------------------------------------------------------------------------
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-----------------ACCAATCAACCA---------------------------------------------------
----------------------------------------------------------------
>chr6D_844
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ACATTATCAT--CACACACAC-----CAT
GCATAGTAGAGCAGCCATGATTGGTTGGCCCTCTATAAGAAGCTCTCCAAAGACACTTCCTCTCCTCA------------
TCTCTCTCTCACACACACATCATC-----TCCTCCACCTCT------C--AACCAAGCCAAGGC--------CAAGAGCT
CAGTGAAGCA---GCGGCCATGGAGGGCAAGGAGGAGGACGTGCGGCTGGGCGCGAACCGCTACTCGGAGCACCAGCCCA
TCGGCACGGCGGCGCAGGGCGGCGGCGCGGACGAGAAGGACTACAAGGAGCCGCCCCCGGCCCCCTTCTTCGAGGCCGGG
GAGCTCACCTCCTGGTCCTTCTACCGGGCCGGCATCGCCGAGTTCCTGGCCACCTTCCTCTTCCTCTACATCTCGGTGCT
CACCGTGATGGGCGTGGTGGGCA------ACCCGTCCGGGTCCAAG---------------TGCGGCACCGTCGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCGGTCACCTTCGGGCTGTTTTTGGCCCGGAAGCTGTCGCTTACCAGGGCCGTGTTCTACATCGTGATGCAGTGCCT
GGGCGCCATATGCGGCGCCGGCGTGGTGAAGGGGTTCCAGACCACGCTGTACCAGGGCAACGGCGGCGGCGCCAACTCCG
TCGCGCCCGGGTACACCAAGGGGGACGGGCTCGGCGCCGAGATCGTCGGCACGTTCGTGCTGGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTGCTCCTGTAGAATAA---TAGTTACAGACTTA
CAGTGCACCGGCCTGCCGGCGGCGGCCACCGTACCGTAGGTGTTTGGTTTGGACAGACTCATGAG--------GTGA---
---------AACTGATTAAAACTGGTGGGAAACATGCAGATCCTGGCGCCGCTTCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACGGGGACCGGCATCAACCCGGCGAGGTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGGCGTGGGACGACCACGTAAGTAGAATCAACACCCTCC----------ACCATCAT----------TAGTAGCTCG
ATCGTG---------------TTA---AGCTTGATGATGATTATGGTTACGAGCCGCGACCAGCTTACTAATCTCATCGA
CACAATCTGAT---AATTTGGCAGTGGATCTTCTGGGTGGGCCCGTTCATCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCCGGGCCATCCCCTTCAAGAGCCGCGACTAGTCC-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------ACCAATCAACCAGTCGCGAATGGAAT-------------------------------------
----------------------------------------------------------------
>chr6A_844
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ACATTATCATCACACACACAC-----CAT
GCATAGTAGAGCAGCCATGATTGGTTGGCCCTCTATAAGAAGCTCTCCAAAGACACTCCCTCTCCTCATCTCA-----TC
TCTCTCTCTCACACACACATCATC-----TCCCCCACCTCT------CTC-------CCAAAGC--------CAAGAGCT
CAGAGAAGCA---CCGGCCATGGAGGGCAAGGAGGAGGACGTGCGCCTGGGCGCGAACCGCTACTCGGAGCACCAGCCCA
TCGGCACGGCGGCGCAGGGCGGCGGCGCGGACGAGAAGGACTACAAGGAGCCGCCCCCGGCCCCCTTCTTCGAGGCCGGG
GAGCTCACCTCCTGGTCCTTCTACCGGGCCGGCATCGCCGAGTTCCTGGCCACTTTCCTCTTCCTCTACATCTCGGTGCT
CACCGTGATGGGCGTGGTGGGCA------ACCCGTCGGGGTCCAAG---------------TGCGGCACGGTCGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCGGTCACCTTCGGGCTGTTTTTGGCAAGGAAGCTGTCGCTCACCAGGGCCGTCTTCTACATCGTGATGCAGTGCCT
GGGGGCCATATGCGGCGCCGGCGTGGTCAAGGGGTTCCAGACCACGCTGTACCAGGGCAACGGCGGCGGCGCCAACTCCG
TCGCGCCCGGGTACACCAAGGGGGACGGGCTAGGGGCTGAGATCGTCGGCACGTTCGTGCTGGTCTACACCGTCTTCTCT
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTACTCCTGTAGAATTA---TAG--------TTA
CAGTGCACCGGCCTGCCGGCGGCGGCCACCCTGGG-----TGCTTGGTTTGGACTGACTGATGATCAGGTGATGTGA---
---------AACTAATCAAAACTGGTGGGAAACATGCAGATTTTGGCGCCGCTTCCCATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACGGGGACCGGCATCAACCCGGCGAGGTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGGCGTGGGACGACCACGTAAGAT---------------------TAGAAT---CAA----------TTTGATATGA
ATCATTCATTAGTT-----AATTA---AGCTTGAAGATGATCATGGATGGCTTGGAGCTGGCTAGAGACTAATCAG----
--TGATCTGCTTGAAATTGTGCAGTGGATCTTCTGGGTTGGTCCGTTCATCGGTGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGACTAGTCA-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------GCCAATCAG------------------------------------------------------
----------------------------------------------------------------
>chr6B_867
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------CAGAGCGGCCATGATTGGCC--CCCTCTATAAGAGGCACTCCAAACCCACTCCCATTCCTCATCTC--------
TCCATCTCTCACGCACCCATCTAC-----ATCTTCTCCTCCGCGCAGC--AACCAA------GC--------CAAGCTC-
-----GAGCG---GCGGCAATGGAGGGCAAGGAGGAGGACGTGCGCCTGGGCGCGAACCGCTACTCGGAGCGCCAGCCCA
TCGGCACGGCGGCGCAGGGCGGCGGCGCGGACGAGAAGGACTACAAGGAGCCGCCCCCGGCGCCCCTCTTCGAGGCGGAG
GAGCTCACCTCCTGGTCCTTCTACCGGGCCGGCATCGCCGAGTTCCTGGCCACCTTCCTCTTCCTCTACATCTCGGTGCT
CACCGTGATGGGCGTGGTGGGCA------ACCCGTCGGGGTCCAAG---------------TGCGGCACGGTGGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGCCACATCAAC
CCCGCGGTCACCTTCGGGCTGTTCCTGGCCCGGAAGCTGTCGCTCACCAGGGCGGTGTTCTACATGGCGATGCAGTGCCT
GGGCGCGATATGCGGGGCTGGGGTTGTCAAGGGGTTCCAGACCACGCTGTACCAGGGCAACGGCGGCGGCGCCAACTCCG
TCGCGCCCGGGTACACCAAGGGTGACGGGCTGGGCGCCGAGATCGTCGGCACGTTCGTGCTGGTTTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTACA--T---------ACGTGC--------ATA
CAGTGCACTGGT-GGCCGGCGGCGGCCACCGCAGG-----TGTTTGGTTTTGTC----------A--------ACGACTG
ACGAATTGAA----------------------ATTGCAGATTTTGGCGCCGCTTCCGATTGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACCGGCACGGGCATCAACCCGGCGAGGTCGCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGGCGTGGGACGACCACGTAAGTAGAAACAACATCCTCC----------AC---CAT----------TATTAGCTCG
ATCGTGCTTAAGCT-----TACTA---ATCT-------------------------------------------CATCGA
TATGATCTGTTTGAAATTTGGCAGTGGATCTTCTGGGTTGGTCCGTTCATCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCAATCCCCTTCAAGAGCCGCGACTAGTCA-------------------------------------
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-----------------GCCAATCA-------------------------------------------------------
----------------------------------------------------------------
>chr6A_867
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------CAGAGCGGCCATGATTGGCC--TCCTCTATAAGAGGCACTCAG-ACCCGCTCTCTTTCCTCATCTC--------
TCTCACCCATCCACCATCT---------------------------------CCAAGCCAAGCTAACCAGCTCAAGCTC-
-----AAGCG---TCAGCAATGGAGGGCAAGGAGGAGGACGTGCGCCTGGGCGCCAACCGCTACTCGGAGCGCCAGCCCA
TCGGCACGGCGGCGCAGGGCGGCGGCGCGGACGAGAAGGACTACAAGGAGCCGCCCCCGGCGCCCCTCTTCGAGGCGGAG
GAGCTCACCTCCTGGTCCTTCTACCGGGCCGGCATCGCCGAGTTCCTGGCCACCTTCCTCTTCCTCTACATCTCGGTGCT
CACCGTGATGGGCGTGGTGGGCA------ACCCGTCCGGGTCCAAG---------------TGCGGCACCGTTGGCATCC
AGGGCATCGCCTGGAGCTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGCATCTCCGGCGGACACATCAAC
CCCGCGGTCACCTTCGGGCTGTTCCTGGCCAGGAAGCTGTCGCTCACCAGGGCGGTATTCTACATGGTCATGCAGTGCCT
GGGCGCCATATGTGGCGCCGGCGTGGTCAAGGGGTTCCAGACCACGCTGTACCAGGGCAACGGCGGCGGCGCCAACTCCG
TCGCGCCGGGGTACACCAAGGGGGACGGGCTCGGTGCGGAGATCGTCGGCACGTTCGTGCTGGTGTACACCGTCTTCTCC
GCCACCGACGCCAAGCGCAGCGCCAGAGACTCCCACGTCCCCGTAAGTACTCCT---------ATGTAG--------ATA
CAGTGCACCGGCCGGCCGGGGGCGACCACCGTACC-----TGTTTGGTTTGGGC----------A--------GTGAGTT
AGTAGATGAAACCAGTCAAAACTGATACGGTGATTGCAGATTTTGGCGCCTCTTCCGATCGGGTTCGCGGTGTTCCTGGT
GCACCTGGCGACGATCCCCATCACGGGGACCGGCATCAACCCGGCGAGGTCCCTCGGCGCCGCCATCATCTACAACAAGA
AGCAGGCGTGGGACGACCACGTAAGAT---------------------TAGAAT---CAA----------TTTGATATGA
ATCATTCATGAGTT-----AATTA---AGCTTGAAGATGATCATGCATGGTTTGGAGCTGGCTAGAGACTAATCAG----
--TGATCTGCTTGAAATTGTGCAGTGGATCTTCTGGGTTGGTCCGTTCATCGGCGCGGCGCTGGCGGCCATCTACCACGT
GGTGGTGATCAGGGCCATCCCCTTCAAGAGCCGCGACTAGTGG-------------------------------------
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-----------------ACCAATCAG------------------------------------------------------
----------------------------------------------------------------
>chr2D_1096
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----------------------------------CAAGGACTACTCCGACCCGCCGCCGGCGCCGCTCTTCGACGCCGAG
GAGCTGACCAAGTGGTCACTCTACCGCGCGGTCATCGCCGAGTTCGTGGCCACGCTGCTCTTCCTCTACATCACCGTGGC
CACCGTCATCGGGTACAAGCACCAGGCGGACCCCGCCGGCCCCAACGCCGCCGACGCGGCCTGCAGCGGCGTCGGCATCC
TGGGCATCGCCTGGGCGTTCGGCGGCATGATCTTCGTGCTCGTCTACTGCACCGCCGGTGTCTCGGGCGGACACATCAAC
CCGGCGGTGACCTTCGGGCTGTTCCTGGCGCGCAAGGTGTCCCTGGTGCGCGCGCTGCTCTACATCATCGCGCAGTGCCT
GGGCGCCATCTGCGGCGTGGGGCTCGTCAAGGGGTTCCAGAGCGCCTTCTACGTGCGCTACGGCGGCGGCGCCAACGAGC
TCAGCTCCGGCTTCTCCAAGGGCACCGGCCTCGCCGCGGAGATCATCGGCACCTTCGTGCTCGTCTACACCGTCTTCTCC
GCCACCGACCCCAAGCGCAGCGCCCGTGACTCCCACGTCCCGGTAAGTTAT-----------------------------
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----------------------------------CACCCTCCTACTC---------------------------------
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----------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------------------------S--
----------------------------------------------------S-----------------S-----S---
-----SS-------------------------------------------------------------------------
--------------------------------------------------------------------S--S--------
---------------------S----------------------------------------S-----------------
------------------S--S---------------------------S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-----------------------------------------------S--------------------------------
---------------------------------------------------------------------------S----
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------------------------------------------------------S-------------------------
------------------------------------SS-S---S-----S------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--S----S------------S--------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------SSSS---------S
-----------------------------------------------------------S--------------------
-------SS---------------------S-----------------------------------------------S-
-----------S--------------------------------------------------------------------
---S-S-----------------------------------S-----------------------S--------------
--S---------------------------------------------------S----------------S--------
SSSS----------------------SSS--SSSSSSSSSSSSSSSSSS----------S-S------------------
-----S-S--S-SS-------SS-S----S--------------------S------------------------S----
------S--S-----S------------------------------------------------S-S-----SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSS----S-------SSS-SSSS-S-S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_266
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------ACTAATTTTTAGCGCGCGGC------------------------------------------------------
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>reverse_1804
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-------------------------------------------GATGGACGGATTTGGTGCAG-----------------
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>forward_1735
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-----------------------------------CGTCCCCGTAAGTACACCGT-------------------------
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>reverse_3164
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-------------------------------------------ATGCGAGCACCAGGATTTGA-----------------
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----------------------------------------------------------------
