Multiple sequence alignment - TraesCS5B01G152400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G152400 chr5B 100.000 2606 0 0 1 2606 281645841 281643236 0.000000e+00 4813.0
1 TraesCS5B01G152400 chr5B 74.161 298 51 20 148 431 301937400 301937685 1.650000e-17 100.0
2 TraesCS5B01G152400 chr5B 94.000 50 3 0 2260 2309 569217914 569217963 2.780000e-10 76.8
3 TraesCS5B01G152400 chr5A 89.878 1146 67 26 941 2065 330963889 330965006 0.000000e+00 1428.0
4 TraesCS5B01G152400 chr5A 90.247 769 44 6 1 768 330962902 330963640 0.000000e+00 976.0
5 TraesCS5B01G152400 chr5A 91.954 174 8 3 763 934 330963683 330963852 3.350000e-59 239.0
6 TraesCS5B01G152400 chr5A 78.947 114 14 7 146 254 144027207 144027099 4.650000e-08 69.4
7 TraesCS5B01G152400 chr5D 93.012 830 34 11 788 1606 246766041 246766857 0.000000e+00 1190.0
8 TraesCS5B01G152400 chr5D 91.074 773 45 12 1 768 246765212 246765965 0.000000e+00 1024.0
9 TraesCS5B01G152400 chr5D 87.009 331 21 8 1655 1971 246767160 246767482 1.150000e-93 353.0
10 TraesCS5B01G152400 chr5D 94.000 50 3 0 2259 2308 413386225 413386176 2.780000e-10 76.8
11 TraesCS5B01G152400 chr7D 78.855 454 67 19 1145 1597 611442144 611441719 1.970000e-71 279.0
12 TraesCS5B01G152400 chr4D 77.609 460 68 19 1145 1597 117663026 117662595 2.000000e-61 246.0
13 TraesCS5B01G152400 chr4D 84.659 176 27 0 1145 1320 117706348 117706173 2.670000e-40 176.0
14 TraesCS5B01G152400 chr4D 75.000 200 39 9 218 408 48779494 48779691 5.980000e-12 82.4
15 TraesCS5B01G152400 chr4D 75.410 183 34 9 218 391 130785857 130786037 7.730000e-11 78.7
16 TraesCS5B01G152400 chr4B 76.906 459 73 17 1145 1597 179751169 179751600 2.020000e-56 230.0
17 TraesCS5B01G152400 chr4B 74.500 200 40 9 218 408 136212104 136212301 2.780000e-10 76.8
18 TraesCS5B01G152400 chr4A 76.739 460 72 19 1145 1597 456336336 456336767 9.390000e-55 224.0
19 TraesCS5B01G152400 chr4A 86.471 170 23 0 1145 1314 457568324 457568493 1.230000e-43 187.0
20 TraesCS5B01G152400 chr7A 76.419 458 76 18 1141 1597 701462576 701462150 4.370000e-53 219.0
21 TraesCS5B01G152400 chr7B 76.087 460 77 20 1145 1596 700630360 700629926 2.630000e-50 209.0
22 TraesCS5B01G152400 chr2D 73.653 334 57 22 114 431 200778518 200778836 1.650000e-17 100.0
23 TraesCS5B01G152400 chr2B 73.476 328 59 19 119 431 377103508 377103822 5.940000e-17 99.0
24 TraesCS5B01G152400 chr2B 81.319 91 12 5 2305 2392 624178442 624178354 4.650000e-08 69.4
25 TraesCS5B01G152400 chr2A 95.918 49 2 0 2260 2308 728810529 728810577 2.150000e-11 80.5
26 TraesCS5B01G152400 chr2A 94.000 50 3 0 2260 2309 52272958 52272909 2.780000e-10 76.8
27 TraesCS5B01G152400 chr6D 88.060 67 6 2 1526 1591 384533975 384533910 7.730000e-11 78.7
28 TraesCS5B01G152400 chr6B 95.833 48 2 0 2260 2307 465153164 465153211 7.730000e-11 78.7
29 TraesCS5B01G152400 chr6B 82.955 88 9 4 1507 1591 574735919 574735835 1.000000e-09 75.0
30 TraesCS5B01G152400 chr6A 88.060 67 6 2 1526 1591 529048056 529047991 7.730000e-11 78.7
31 TraesCS5B01G152400 chr6A 92.157 51 2 2 2259 2308 611414441 611414490 1.290000e-08 71.3
32 TraesCS5B01G152400 chr6A 91.667 48 4 0 2260 2307 420830868 420830821 1.670000e-07 67.6
33 TraesCS5B01G152400 chr3D 95.833 48 2 0 2259 2306 608638506 608638553 7.730000e-11 78.7
34 TraesCS5B01G152400 chr3D 92.308 52 4 0 2259 2310 400322209 400322158 1.000000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G152400 chr5B 281643236 281645841 2605 True 4813.000000 4813 100.000 1 2606 1 chr5B.!!$R1 2605
1 TraesCS5B01G152400 chr5A 330962902 330965006 2104 False 881.000000 1428 90.693 1 2065 3 chr5A.!!$F1 2064
2 TraesCS5B01G152400 chr5D 246765212 246767482 2270 False 855.666667 1190 90.365 1 1971 3 chr5D.!!$F1 1970

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
629 634 0.714439 GCCTCGAGTAAAGACGCAAC 59.286 55.0 12.31 0.0 0.0 4.17 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2484 2867 0.17691 TGTCGTCACAAGTTGCCAGA 59.823 50.0 1.81 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
107 108 5.148651 AGCGTGGTAAAGTCTAGAACAAT 57.851 39.130 0.00 0.00 0.00 2.71
243 247 6.874134 TGGAATACTCTAGAACAAAGAAGTGC 59.126 38.462 0.00 0.00 0.00 4.40
263 267 7.042797 AGTGCTTGTGTTTTGAGATTTGTAT 57.957 32.000 0.00 0.00 0.00 2.29
317 321 3.415212 ACATATGGCAGAATTCGATGGG 58.585 45.455 7.80 0.00 0.00 4.00
333 337 4.221482 TCGATGGGTGGAGATGATATTCAG 59.779 45.833 0.00 0.00 0.00 3.02
341 345 6.926272 GGTGGAGATGATATTCAGTGACTAAC 59.074 42.308 0.00 0.00 0.00 2.34
552 556 6.506147 TGATCTTGAAAACAATGACCAACAG 58.494 36.000 0.00 0.00 0.00 3.16
562 566 2.079170 TGACCAACAGCATGGGAAAA 57.921 45.000 7.93 0.00 45.18 2.29
594 599 7.473027 TGAGAGACTTTAACAAAAACTACCG 57.527 36.000 0.00 0.00 0.00 4.02
602 607 3.974871 ACAAAAACTACCGAAATGCGT 57.025 38.095 0.00 0.00 38.67 5.24
605 610 1.161843 AAACTACCGAAATGCGTGGG 58.838 50.000 0.00 0.00 38.67 4.61
625 630 1.719780 GTGTTGCCTCGAGTAAAGACG 59.280 52.381 12.31 0.00 0.00 4.18
629 634 0.714439 GCCTCGAGTAAAGACGCAAC 59.286 55.000 12.31 0.00 0.00 4.17
661 666 4.048504 GTGAGTTTACACAAACCAATGGC 58.951 43.478 0.00 0.00 44.32 4.40
772 826 7.931578 ATCCGATACCAATGTTTGACTAAAA 57.068 32.000 0.00 0.00 0.00 1.52
892 959 2.088763 CGGCTACGCGCATATCCAG 61.089 63.158 5.73 0.00 41.67 3.86
1018 1115 3.702548 CACCATGTCCATCAACCATCAAT 59.297 43.478 0.00 0.00 0.00 2.57
1034 1131 5.008613 ACCATCAATGCAATAATCCACGTAC 59.991 40.000 0.00 0.00 0.00 3.67
1087 1187 1.277557 AGGTTACAGAGAAGCCAGCAG 59.722 52.381 0.00 0.00 0.00 4.24
1088 1188 1.082690 GTTACAGAGAAGCCAGCAGC 58.917 55.000 0.00 0.00 44.25 5.25
1374 1480 2.095469 GGAGACGACGACGACGAC 59.905 66.667 25.15 18.88 42.66 4.34
1539 1648 0.685458 GGGCCATGATCTGCAGGTTT 60.685 55.000 15.13 0.00 0.00 3.27
1610 1719 5.483231 TGATGATGGCCAATTTGTAAAGGAA 59.517 36.000 10.96 0.00 0.00 3.36
1613 1722 3.850752 TGGCCAATTTGTAAAGGAAGGA 58.149 40.909 0.61 0.00 0.00 3.36
1640 1749 6.281789 GTTTCATTTCATTCGTTCGCTTTTC 58.718 36.000 0.00 0.00 0.00 2.29
1649 1758 4.233123 TCGTTCGCTTTTCTCTTCTGTA 57.767 40.909 0.00 0.00 0.00 2.74
1704 2067 6.205658 TGATGGACGTTTCAATTGTATGTTGA 59.794 34.615 5.13 0.00 34.01 3.18
1820 2187 5.663106 AGCTCATACCTCTTCCTATTTGACA 59.337 40.000 0.00 0.00 0.00 3.58
1821 2188 6.328672 AGCTCATACCTCTTCCTATTTGACAT 59.671 38.462 0.00 0.00 0.00 3.06
1822 2189 6.648725 GCTCATACCTCTTCCTATTTGACATC 59.351 42.308 0.00 0.00 0.00 3.06
1823 2190 7.472663 GCTCATACCTCTTCCTATTTGACATCT 60.473 40.741 0.00 0.00 0.00 2.90
1824 2191 9.083422 CTCATACCTCTTCCTATTTGACATCTA 57.917 37.037 0.00 0.00 0.00 1.98
1842 2209 9.803315 TGACATCTACTGTAGTTCATTGATAAC 57.197 33.333 14.11 0.00 38.54 1.89
1853 2220 8.946085 GTAGTTCATTGATAACAATCTGGTTCA 58.054 33.333 0.00 0.00 43.76 3.18
1883 2250 5.731957 TTTAAGCAAATGGTAAACCCTCC 57.268 39.130 0.00 0.00 34.29 4.30
1893 2260 3.151554 GGTAAACCCTCCGTTGACATTT 58.848 45.455 0.00 0.00 37.54 2.32
1926 2306 9.696917 GAACAAATAATAAAGGATATTGGCCTG 57.303 33.333 3.32 0.00 35.50 4.85
1953 2333 1.448717 GCGGCTCACTTCCTTCTCC 60.449 63.158 0.00 0.00 0.00 3.71
1969 2349 0.680618 CTCCCCTTTGCATGCAACAA 59.319 50.000 31.99 17.99 35.46 2.83
1986 2366 5.105675 TGCAACAATAACACATGAGCATGAT 60.106 36.000 16.70 0.00 41.20 2.45
2038 2421 7.562454 TCAAAAAGTTTATCTCTCAAACCGT 57.438 32.000 0.00 0.00 36.71 4.83
2040 2423 9.111613 TCAAAAAGTTTATCTCTCAAACCGTTA 57.888 29.630 0.00 0.00 36.71 3.18
2041 2424 9.724839 CAAAAAGTTTATCTCTCAAACCGTTAA 57.275 29.630 0.00 0.00 36.71 2.01
2048 2431 3.064931 CTCTCAAACCGTTAACCTGGTC 58.935 50.000 0.00 0.00 37.54 4.02
2065 2448 1.153901 TCGACGGTCCGCTTTCATC 60.154 57.895 12.28 0.00 0.00 2.92
2066 2449 1.445410 CGACGGTCCGCTTTCATCA 60.445 57.895 12.28 0.00 0.00 3.07
2067 2450 0.806102 CGACGGTCCGCTTTCATCAT 60.806 55.000 12.28 0.00 0.00 2.45
2068 2451 1.369625 GACGGTCCGCTTTCATCATT 58.630 50.000 12.28 0.00 0.00 2.57
2069 2452 2.546778 GACGGTCCGCTTTCATCATTA 58.453 47.619 12.28 0.00 0.00 1.90
2070 2453 3.131396 GACGGTCCGCTTTCATCATTAT 58.869 45.455 12.28 0.00 0.00 1.28
2071 2454 3.131396 ACGGTCCGCTTTCATCATTATC 58.869 45.455 12.28 0.00 0.00 1.75
2072 2455 3.181465 ACGGTCCGCTTTCATCATTATCT 60.181 43.478 12.28 0.00 0.00 1.98
2073 2456 3.809832 CGGTCCGCTTTCATCATTATCTT 59.190 43.478 0.00 0.00 0.00 2.40
2074 2457 4.084328 CGGTCCGCTTTCATCATTATCTTC 60.084 45.833 0.00 0.00 0.00 2.87
2075 2458 4.084328 GGTCCGCTTTCATCATTATCTTCG 60.084 45.833 0.00 0.00 0.00 3.79
2076 2459 4.508124 GTCCGCTTTCATCATTATCTTCGT 59.492 41.667 0.00 0.00 0.00 3.85
2077 2460 4.745125 TCCGCTTTCATCATTATCTTCGTC 59.255 41.667 0.00 0.00 0.00 4.20
2078 2461 4.507756 CCGCTTTCATCATTATCTTCGTCA 59.492 41.667 0.00 0.00 0.00 4.35
2079 2462 5.427082 CGCTTTCATCATTATCTTCGTCAC 58.573 41.667 0.00 0.00 0.00 3.67
2080 2463 5.427082 GCTTTCATCATTATCTTCGTCACG 58.573 41.667 0.00 0.00 0.00 4.35
2081 2464 5.389642 TTTCATCATTATCTTCGTCACGC 57.610 39.130 0.00 0.00 0.00 5.34
2082 2465 3.042887 TCATCATTATCTTCGTCACGCG 58.957 45.455 3.53 3.53 43.01 6.01
2092 2475 1.773410 TCGTCACGCGAGATTTTTGA 58.227 45.000 15.93 0.00 45.68 2.69
2093 2476 2.128821 TCGTCACGCGAGATTTTTGAA 58.871 42.857 15.93 0.00 45.68 2.69
2094 2477 2.540516 TCGTCACGCGAGATTTTTGAAA 59.459 40.909 15.93 0.00 45.68 2.69
2095 2478 2.645647 CGTCACGCGAGATTTTTGAAAC 59.354 45.455 15.93 0.00 44.77 2.78
2096 2479 3.603857 CGTCACGCGAGATTTTTGAAACT 60.604 43.478 15.93 0.00 44.77 2.66
2097 2480 4.375606 CGTCACGCGAGATTTTTGAAACTA 60.376 41.667 15.93 0.00 44.77 2.24
2098 2481 5.437263 GTCACGCGAGATTTTTGAAACTAA 58.563 37.500 15.93 0.00 0.00 2.24
2099 2482 5.905181 GTCACGCGAGATTTTTGAAACTAAA 59.095 36.000 15.93 0.00 0.00 1.85
2100 2483 6.577427 GTCACGCGAGATTTTTGAAACTAAAT 59.423 34.615 15.93 0.00 0.00 1.40
2101 2484 6.795114 TCACGCGAGATTTTTGAAACTAAATC 59.205 34.615 15.93 0.00 39.77 2.17
2102 2485 6.032460 CACGCGAGATTTTTGAAACTAAATCC 59.968 38.462 15.93 0.00 40.13 3.01
2103 2486 5.511729 CGCGAGATTTTTGAAACTAAATCCC 59.488 40.000 0.00 0.00 40.13 3.85
2104 2487 6.386654 GCGAGATTTTTGAAACTAAATCCCA 58.613 36.000 0.00 0.00 40.13 4.37
2105 2488 7.035612 GCGAGATTTTTGAAACTAAATCCCAT 58.964 34.615 0.00 0.00 40.13 4.00
2106 2489 7.009540 GCGAGATTTTTGAAACTAAATCCCATG 59.990 37.037 0.00 0.00 40.13 3.66
2107 2490 8.028938 CGAGATTTTTGAAACTAAATCCCATGT 58.971 33.333 0.00 0.00 40.13 3.21
2108 2491 9.358872 GAGATTTTTGAAACTAAATCCCATGTC 57.641 33.333 0.00 0.00 40.13 3.06
2109 2492 8.028938 AGATTTTTGAAACTAAATCCCATGTCG 58.971 33.333 0.00 0.00 40.13 4.35
2110 2493 5.637006 TTTGAAACTAAATCCCATGTCGG 57.363 39.130 0.00 0.00 0.00 4.79
2111 2494 4.561500 TGAAACTAAATCCCATGTCGGA 57.438 40.909 0.00 0.00 36.56 4.55
2112 2495 4.912586 TGAAACTAAATCCCATGTCGGAA 58.087 39.130 0.00 0.00 36.56 4.30
2113 2496 5.505780 TGAAACTAAATCCCATGTCGGAAT 58.494 37.500 0.00 0.00 36.56 3.01
2114 2497 5.356751 TGAAACTAAATCCCATGTCGGAATG 59.643 40.000 0.00 0.00 36.56 2.67
2115 2498 4.771114 ACTAAATCCCATGTCGGAATGA 57.229 40.909 0.00 0.00 36.56 2.57
2116 2499 5.310409 ACTAAATCCCATGTCGGAATGAT 57.690 39.130 0.00 0.00 36.56 2.45
2117 2500 5.694995 ACTAAATCCCATGTCGGAATGATT 58.305 37.500 0.00 0.00 36.56 2.57
2118 2501 6.129179 ACTAAATCCCATGTCGGAATGATTT 58.871 36.000 0.00 0.00 37.14 2.17
2119 2502 7.287061 ACTAAATCCCATGTCGGAATGATTTA 58.713 34.615 0.00 0.00 35.77 1.40
2120 2503 7.777910 ACTAAATCCCATGTCGGAATGATTTAA 59.222 33.333 0.00 0.00 36.14 1.52
2121 2504 7.601705 AAATCCCATGTCGGAATGATTTAAT 57.398 32.000 0.00 0.00 33.72 1.40
2122 2505 7.601705 AATCCCATGTCGGAATGATTTAATT 57.398 32.000 0.00 0.00 36.56 1.40
2123 2506 8.704849 AATCCCATGTCGGAATGATTTAATTA 57.295 30.769 0.00 0.00 36.56 1.40
2124 2507 7.504924 TCCCATGTCGGAATGATTTAATTAC 57.495 36.000 0.00 0.00 36.56 1.89
2125 2508 7.287061 TCCCATGTCGGAATGATTTAATTACT 58.713 34.615 0.00 0.00 36.56 2.24
2126 2509 7.777910 TCCCATGTCGGAATGATTTAATTACTT 59.222 33.333 0.00 0.00 36.56 2.24
2127 2510 8.413229 CCCATGTCGGAATGATTTAATTACTTT 58.587 33.333 0.00 0.00 36.56 2.66
2128 2511 9.801873 CCATGTCGGAATGATTTAATTACTTTT 57.198 29.630 0.00 0.00 36.56 2.27
2151 2534 6.897259 TTTTGTCGATACTAGCCACATTAC 57.103 37.500 0.00 0.00 0.00 1.89
2152 2535 5.847111 TTGTCGATACTAGCCACATTACT 57.153 39.130 0.00 0.00 0.00 2.24
2153 2536 6.947644 TTGTCGATACTAGCCACATTACTA 57.052 37.500 0.00 0.00 0.00 1.82
2154 2537 7.520451 TTGTCGATACTAGCCACATTACTAT 57.480 36.000 0.00 0.00 0.00 2.12
2155 2538 7.142306 TGTCGATACTAGCCACATTACTATC 57.858 40.000 0.00 0.00 0.00 2.08
2156 2539 6.713450 TGTCGATACTAGCCACATTACTATCA 59.287 38.462 0.00 0.00 0.00 2.15
2157 2540 7.022384 GTCGATACTAGCCACATTACTATCAC 58.978 42.308 0.00 0.00 0.00 3.06
2158 2541 6.940867 TCGATACTAGCCACATTACTATCACT 59.059 38.462 0.00 0.00 0.00 3.41
2159 2542 7.447545 TCGATACTAGCCACATTACTATCACTT 59.552 37.037 0.00 0.00 0.00 3.16
2160 2543 8.727910 CGATACTAGCCACATTACTATCACTTA 58.272 37.037 0.00 0.00 0.00 2.24
2166 2549 8.904099 AGCCACATTACTATCACTTATTTACC 57.096 34.615 0.00 0.00 0.00 2.85
2167 2550 8.491134 AGCCACATTACTATCACTTATTTACCA 58.509 33.333 0.00 0.00 0.00 3.25
2168 2551 9.284968 GCCACATTACTATCACTTATTTACCAT 57.715 33.333 0.00 0.00 0.00 3.55
2190 2573 9.899661 ACCATGTTATTAGCTATTTAGTTGTCA 57.100 29.630 0.00 0.00 0.00 3.58
2205 2588 8.781067 TTTAGTTGTCAAATTGATGAAAGTCG 57.219 30.769 0.00 0.00 0.00 4.18
2206 2589 6.618287 AGTTGTCAAATTGATGAAAGTCGA 57.382 33.333 0.00 0.00 0.00 4.20
2207 2590 7.206981 AGTTGTCAAATTGATGAAAGTCGAT 57.793 32.000 0.00 0.00 0.00 3.59
2208 2591 8.322906 AGTTGTCAAATTGATGAAAGTCGATA 57.677 30.769 0.00 0.00 0.00 2.92
2209 2592 8.950210 AGTTGTCAAATTGATGAAAGTCGATAT 58.050 29.630 0.00 0.00 0.00 1.63
2212 2595 9.599866 TGTCAAATTGATGAAAGTCGATATACT 57.400 29.630 0.00 0.00 0.00 2.12
2214 2597 9.816354 TCAAATTGATGAAAGTCGATATACTCA 57.184 29.630 0.00 0.00 0.00 3.41
2236 2619 9.372369 ACTCATCTAAAAGACTTTACAGTATGC 57.628 33.333 0.00 0.00 42.53 3.14
2237 2620 8.718102 TCATCTAAAAGACTTTACAGTATGCC 57.282 34.615 0.00 0.00 42.53 4.40
2238 2621 8.540388 TCATCTAAAAGACTTTACAGTATGCCT 58.460 33.333 0.00 0.00 42.53 4.75
2239 2622 8.821894 CATCTAAAAGACTTTACAGTATGCCTC 58.178 37.037 0.00 0.00 42.53 4.70
2240 2623 7.328737 TCTAAAAGACTTTACAGTATGCCTCC 58.671 38.462 0.00 0.00 42.53 4.30
2241 2624 3.802948 AGACTTTACAGTATGCCTCCG 57.197 47.619 0.00 0.00 42.53 4.63
2242 2625 3.097614 AGACTTTACAGTATGCCTCCGT 58.902 45.455 0.00 0.00 42.53 4.69
2243 2626 3.130693 AGACTTTACAGTATGCCTCCGTC 59.869 47.826 0.00 0.00 42.53 4.79
2244 2627 2.167900 ACTTTACAGTATGCCTCCGTCC 59.832 50.000 0.00 0.00 42.53 4.79
2245 2628 1.117150 TTACAGTATGCCTCCGTCCC 58.883 55.000 0.00 0.00 42.53 4.46
2246 2629 1.105167 TACAGTATGCCTCCGTCCCG 61.105 60.000 0.00 0.00 42.53 5.14
2247 2630 2.125326 CAGTATGCCTCCGTCCCGA 61.125 63.158 0.00 0.00 0.00 5.14
2248 2631 1.380785 AGTATGCCTCCGTCCCGAA 60.381 57.895 0.00 0.00 0.00 4.30
2249 2632 0.759436 AGTATGCCTCCGTCCCGAAT 60.759 55.000 0.00 0.00 0.00 3.34
2250 2633 0.106149 GTATGCCTCCGTCCCGAATT 59.894 55.000 0.00 0.00 0.00 2.17
2251 2634 0.834612 TATGCCTCCGTCCCGAATTT 59.165 50.000 0.00 0.00 0.00 1.82
2252 2635 0.834612 ATGCCTCCGTCCCGAATTTA 59.165 50.000 0.00 0.00 0.00 1.40
2253 2636 0.108041 TGCCTCCGTCCCGAATTTAC 60.108 55.000 0.00 0.00 0.00 2.01
2254 2637 0.177373 GCCTCCGTCCCGAATTTACT 59.823 55.000 0.00 0.00 0.00 2.24
2255 2638 1.410153 GCCTCCGTCCCGAATTTACTA 59.590 52.381 0.00 0.00 0.00 1.82
2256 2639 2.036862 GCCTCCGTCCCGAATTTACTAT 59.963 50.000 0.00 0.00 0.00 2.12
2257 2640 3.650139 CCTCCGTCCCGAATTTACTATG 58.350 50.000 0.00 0.00 0.00 2.23
2258 2641 3.319972 CCTCCGTCCCGAATTTACTATGA 59.680 47.826 0.00 0.00 0.00 2.15
2259 2642 4.021368 CCTCCGTCCCGAATTTACTATGAT 60.021 45.833 0.00 0.00 0.00 2.45
2260 2643 5.130292 TCCGTCCCGAATTTACTATGATC 57.870 43.478 0.00 0.00 0.00 2.92
2261 2644 4.831155 TCCGTCCCGAATTTACTATGATCT 59.169 41.667 0.00 0.00 0.00 2.75
2262 2645 6.005823 TCCGTCCCGAATTTACTATGATCTA 58.994 40.000 0.00 0.00 0.00 1.98
2263 2646 6.150641 TCCGTCCCGAATTTACTATGATCTAG 59.849 42.308 0.00 0.00 0.00 2.43
2264 2647 6.150641 CCGTCCCGAATTTACTATGATCTAGA 59.849 42.308 0.00 0.00 0.00 2.43
2265 2648 7.148052 CCGTCCCGAATTTACTATGATCTAGAT 60.148 40.741 4.47 4.47 0.00 1.98
2266 2649 8.890718 CGTCCCGAATTTACTATGATCTAGATA 58.109 37.037 4.89 0.00 0.00 1.98
2268 2651 9.749340 TCCCGAATTTACTATGATCTAGATACA 57.251 33.333 4.89 6.30 0.00 2.29
2279 2662 9.531942 CTATGATCTAGATACATCCATTTCTGC 57.468 37.037 16.22 0.00 0.00 4.26
2280 2663 6.393171 TGATCTAGATACATCCATTTCTGCG 58.607 40.000 4.89 0.00 0.00 5.18
2281 2664 5.139435 TCTAGATACATCCATTTCTGCGG 57.861 43.478 0.00 0.00 0.00 5.69
2282 2665 2.498167 AGATACATCCATTTCTGCGGC 58.502 47.619 0.00 0.00 0.00 6.53
2283 2666 2.158769 AGATACATCCATTTCTGCGGCA 60.159 45.455 1.29 1.29 0.00 5.69
2284 2667 2.121291 TACATCCATTTCTGCGGCAA 57.879 45.000 3.44 0.00 0.00 4.52
2285 2668 0.813184 ACATCCATTTCTGCGGCAAG 59.187 50.000 3.44 0.00 0.00 4.01
2286 2669 0.813184 CATCCATTTCTGCGGCAAGT 59.187 50.000 3.44 0.00 0.00 3.16
2287 2670 2.016318 CATCCATTTCTGCGGCAAGTA 58.984 47.619 3.44 0.00 0.00 2.24
2288 2671 2.192664 TCCATTTCTGCGGCAAGTAA 57.807 45.000 3.44 0.00 0.00 2.24
2289 2672 2.722094 TCCATTTCTGCGGCAAGTAAT 58.278 42.857 3.44 1.22 0.00 1.89
2290 2673 3.088532 TCCATTTCTGCGGCAAGTAATT 58.911 40.909 3.44 0.00 0.00 1.40
2291 2674 3.128589 TCCATTTCTGCGGCAAGTAATTC 59.871 43.478 3.44 0.00 0.00 2.17
2292 2675 3.119531 CCATTTCTGCGGCAAGTAATTCA 60.120 43.478 3.44 0.00 0.00 2.57
2293 2676 3.829886 TTTCTGCGGCAAGTAATTCAG 57.170 42.857 3.44 0.00 0.00 3.02
2294 2677 2.760634 TCTGCGGCAAGTAATTCAGA 57.239 45.000 3.44 0.00 0.00 3.27
2295 2678 3.052455 TCTGCGGCAAGTAATTCAGAA 57.948 42.857 3.44 0.00 0.00 3.02
2296 2679 2.742053 TCTGCGGCAAGTAATTCAGAAC 59.258 45.455 3.44 0.00 0.00 3.01
2297 2680 1.463056 TGCGGCAAGTAATTCAGAACG 59.537 47.619 0.00 0.00 0.00 3.95
2298 2681 1.730064 GCGGCAAGTAATTCAGAACGA 59.270 47.619 0.00 0.00 0.00 3.85
2299 2682 2.158841 GCGGCAAGTAATTCAGAACGAA 59.841 45.455 0.00 0.00 38.22 3.85
2300 2683 3.725010 GCGGCAAGTAATTCAGAACGAAG 60.725 47.826 0.00 0.00 36.95 3.79
2301 2684 3.181520 CGGCAAGTAATTCAGAACGAAGG 60.182 47.826 0.00 0.00 36.95 3.46
2302 2685 3.127030 GGCAAGTAATTCAGAACGAAGGG 59.873 47.826 0.00 0.00 36.95 3.95
2303 2686 4.000988 GCAAGTAATTCAGAACGAAGGGA 58.999 43.478 0.00 0.00 36.95 4.20
2304 2687 4.093556 GCAAGTAATTCAGAACGAAGGGAG 59.906 45.833 0.00 0.00 36.95 4.30
2305 2688 5.238583 CAAGTAATTCAGAACGAAGGGAGT 58.761 41.667 0.00 0.00 36.95 3.85
2306 2689 6.395629 CAAGTAATTCAGAACGAAGGGAGTA 58.604 40.000 0.00 0.00 36.95 2.59
2307 2690 5.963594 AGTAATTCAGAACGAAGGGAGTAC 58.036 41.667 0.00 0.00 36.95 2.73
2308 2691 5.715753 AGTAATTCAGAACGAAGGGAGTACT 59.284 40.000 0.00 0.00 36.95 2.73
2309 2692 5.485209 AATTCAGAACGAAGGGAGTACTT 57.515 39.130 0.00 0.00 36.95 2.24
2310 2693 3.936372 TCAGAACGAAGGGAGTACTTG 57.064 47.619 0.00 0.00 0.00 3.16
2311 2694 3.228453 TCAGAACGAAGGGAGTACTTGT 58.772 45.455 0.00 0.00 0.00 3.16
2312 2695 3.005472 TCAGAACGAAGGGAGTACTTGTG 59.995 47.826 0.00 0.00 0.00 3.33
2313 2696 2.963782 AGAACGAAGGGAGTACTTGTGT 59.036 45.455 0.00 0.00 0.00 3.72
2314 2697 2.814280 ACGAAGGGAGTACTTGTGTG 57.186 50.000 0.00 0.00 0.00 3.82
2315 2698 1.343465 ACGAAGGGAGTACTTGTGTGG 59.657 52.381 0.00 0.00 0.00 4.17
2316 2699 1.337823 CGAAGGGAGTACTTGTGTGGG 60.338 57.143 0.00 0.00 0.00 4.61
2317 2700 1.697982 GAAGGGAGTACTTGTGTGGGT 59.302 52.381 0.00 0.00 0.00 4.51
2318 2701 1.815757 AGGGAGTACTTGTGTGGGTT 58.184 50.000 0.00 0.00 0.00 4.11
2319 2702 1.420138 AGGGAGTACTTGTGTGGGTTG 59.580 52.381 0.00 0.00 0.00 3.77
2320 2703 1.418637 GGGAGTACTTGTGTGGGTTGA 59.581 52.381 0.00 0.00 0.00 3.18
2321 2704 2.039879 GGGAGTACTTGTGTGGGTTGAT 59.960 50.000 0.00 0.00 0.00 2.57
2322 2705 3.262405 GGGAGTACTTGTGTGGGTTGATA 59.738 47.826 0.00 0.00 0.00 2.15
2323 2706 4.080526 GGGAGTACTTGTGTGGGTTGATAT 60.081 45.833 0.00 0.00 0.00 1.63
2324 2707 5.116882 GGAGTACTTGTGTGGGTTGATATC 58.883 45.833 0.00 0.00 0.00 1.63
2325 2708 5.104900 GGAGTACTTGTGTGGGTTGATATCT 60.105 44.000 3.98 0.00 0.00 1.98
2326 2709 5.978814 AGTACTTGTGTGGGTTGATATCTC 58.021 41.667 3.98 0.00 0.00 2.75
2327 2710 5.721960 AGTACTTGTGTGGGTTGATATCTCT 59.278 40.000 3.98 0.00 0.00 3.10
2328 2711 5.505181 ACTTGTGTGGGTTGATATCTCTT 57.495 39.130 3.98 0.00 0.00 2.85
2329 2712 5.491982 ACTTGTGTGGGTTGATATCTCTTC 58.508 41.667 3.98 0.00 0.00 2.87
2330 2713 5.249393 ACTTGTGTGGGTTGATATCTCTTCT 59.751 40.000 3.98 0.00 0.00 2.85
2331 2714 5.762179 TGTGTGGGTTGATATCTCTTCTT 57.238 39.130 3.98 0.00 0.00 2.52
2332 2715 6.867519 TGTGTGGGTTGATATCTCTTCTTA 57.132 37.500 3.98 0.00 0.00 2.10
2333 2716 6.640518 TGTGTGGGTTGATATCTCTTCTTAC 58.359 40.000 3.98 0.00 0.00 2.34
2334 2717 6.440647 TGTGTGGGTTGATATCTCTTCTTACT 59.559 38.462 3.98 0.00 0.00 2.24
2335 2718 7.038302 TGTGTGGGTTGATATCTCTTCTTACTT 60.038 37.037 3.98 0.00 0.00 2.24
2336 2719 8.475639 GTGTGGGTTGATATCTCTTCTTACTTA 58.524 37.037 3.98 0.00 0.00 2.24
2337 2720 9.213777 TGTGGGTTGATATCTCTTCTTACTTAT 57.786 33.333 3.98 0.00 0.00 1.73
2358 2741 9.998106 ACTTATTGTTACACTTGAATACTCACT 57.002 29.630 0.00 0.00 0.00 3.41
2362 2745 7.946655 TGTTACACTTGAATACTCACTCTTG 57.053 36.000 0.00 0.00 0.00 3.02
2363 2746 6.929049 TGTTACACTTGAATACTCACTCTTGG 59.071 38.462 0.00 0.00 0.00 3.61
2364 2747 4.899502 ACACTTGAATACTCACTCTTGGG 58.100 43.478 0.00 0.00 0.00 4.12
2365 2748 3.686726 CACTTGAATACTCACTCTTGGGC 59.313 47.826 0.00 0.00 0.00 5.36
2366 2749 3.584848 ACTTGAATACTCACTCTTGGGCT 59.415 43.478 0.00 0.00 0.00 5.19
2367 2750 3.895232 TGAATACTCACTCTTGGGCTC 57.105 47.619 0.00 0.00 0.00 4.70
2368 2751 3.173151 TGAATACTCACTCTTGGGCTCA 58.827 45.455 0.00 0.00 0.00 4.26
2369 2752 3.582647 TGAATACTCACTCTTGGGCTCAA 59.417 43.478 0.00 0.00 0.00 3.02
2370 2753 4.041567 TGAATACTCACTCTTGGGCTCAAA 59.958 41.667 0.00 0.00 31.77 2.69
2371 2754 2.557920 ACTCACTCTTGGGCTCAAAG 57.442 50.000 0.00 3.74 31.77 2.77
2372 2755 1.771255 ACTCACTCTTGGGCTCAAAGT 59.229 47.619 0.00 4.41 31.77 2.66
2373 2756 2.972713 ACTCACTCTTGGGCTCAAAGTA 59.027 45.455 0.00 0.00 31.77 2.24
2374 2757 3.391296 ACTCACTCTTGGGCTCAAAGTAA 59.609 43.478 0.00 0.00 31.77 2.24
2375 2758 4.042187 ACTCACTCTTGGGCTCAAAGTAAT 59.958 41.667 0.00 0.00 31.77 1.89
2376 2759 5.248477 ACTCACTCTTGGGCTCAAAGTAATA 59.752 40.000 0.00 0.00 31.77 0.98
2377 2760 6.069963 ACTCACTCTTGGGCTCAAAGTAATAT 60.070 38.462 0.00 0.00 31.77 1.28
2378 2761 6.721318 TCACTCTTGGGCTCAAAGTAATATT 58.279 36.000 0.00 0.00 31.77 1.28
2379 2762 6.599244 TCACTCTTGGGCTCAAAGTAATATTG 59.401 38.462 0.00 0.00 31.77 1.90
2380 2763 5.358160 ACTCTTGGGCTCAAAGTAATATTGC 59.642 40.000 0.00 0.00 31.77 3.56
2381 2764 5.260424 TCTTGGGCTCAAAGTAATATTGCA 58.740 37.500 0.00 0.00 31.77 4.08
2382 2765 5.714333 TCTTGGGCTCAAAGTAATATTGCAA 59.286 36.000 0.00 0.00 31.77 4.08
2383 2766 6.380846 TCTTGGGCTCAAAGTAATATTGCAAT 59.619 34.615 17.56 17.56 31.77 3.56
2384 2767 5.904941 TGGGCTCAAAGTAATATTGCAATG 58.095 37.500 22.27 4.08 0.00 2.82
2385 2768 5.421693 TGGGCTCAAAGTAATATTGCAATGT 59.578 36.000 22.27 12.90 0.00 2.71
2386 2769 6.070881 TGGGCTCAAAGTAATATTGCAATGTT 60.071 34.615 22.66 22.66 0.00 2.71
2387 2770 6.818142 GGGCTCAAAGTAATATTGCAATGTTT 59.182 34.615 23.95 17.60 0.00 2.83
2388 2771 7.978975 GGGCTCAAAGTAATATTGCAATGTTTA 59.021 33.333 23.95 16.71 0.00 2.01
2389 2772 9.364989 GGCTCAAAGTAATATTGCAATGTTTAA 57.635 29.630 23.95 6.97 0.00 1.52
2412 2795 9.627395 TTAAAAACATACACAATTATTGACCGG 57.373 29.630 12.28 0.00 0.00 5.28
2413 2796 6.827586 AAACATACACAATTATTGACCGGT 57.172 33.333 6.92 6.92 0.00 5.28
2414 2797 7.925043 AAACATACACAATTATTGACCGGTA 57.075 32.000 7.34 8.49 0.00 4.02
2415 2798 7.925043 AACATACACAATTATTGACCGGTAA 57.075 32.000 7.34 0.00 0.00 2.85
2416 2799 7.548196 ACATACACAATTATTGACCGGTAAG 57.452 36.000 7.34 7.82 0.00 2.34
2418 2801 3.692593 ACACAATTATTGACCGGTAAGGC 59.307 43.478 7.34 0.00 46.52 4.35
2419 2802 2.940410 ACAATTATTGACCGGTAAGGCG 59.060 45.455 7.34 0.00 46.52 5.52
2420 2803 2.249844 ATTATTGACCGGTAAGGCGG 57.750 50.000 7.34 0.00 46.52 6.13
2421 2804 0.903942 TTATTGACCGGTAAGGCGGT 59.096 50.000 7.34 0.00 46.52 5.68
2422 2805 1.774110 TATTGACCGGTAAGGCGGTA 58.226 50.000 7.34 0.00 46.52 4.02
2423 2806 0.903942 ATTGACCGGTAAGGCGGTAA 59.096 50.000 7.34 0.00 46.52 2.85
2424 2807 0.037419 TTGACCGGTAAGGCGGTAAC 60.037 55.000 7.34 0.00 46.52 2.50
2425 2808 0.899717 TGACCGGTAAGGCGGTAACT 60.900 55.000 7.34 0.00 46.52 2.24
2426 2809 0.459063 GACCGGTAAGGCGGTAACTG 60.459 60.000 7.34 0.00 46.52 3.16
2427 2810 1.187567 ACCGGTAAGGCGGTAACTGT 61.188 55.000 4.49 0.00 46.52 3.55
2428 2811 0.817013 CCGGTAAGGCGGTAACTGTA 59.183 55.000 0.00 0.00 0.00 2.74
2429 2812 1.469767 CCGGTAAGGCGGTAACTGTAC 60.470 57.143 0.00 0.00 0.00 2.90
2430 2813 1.202114 CGGTAAGGCGGTAACTGTACA 59.798 52.381 0.00 0.00 31.21 2.90
2431 2814 2.610433 GGTAAGGCGGTAACTGTACAC 58.390 52.381 0.00 0.00 31.21 2.90
2432 2815 2.029110 GGTAAGGCGGTAACTGTACACA 60.029 50.000 0.00 0.00 31.21 3.72
2433 2816 2.914695 AAGGCGGTAACTGTACACAA 57.085 45.000 0.00 0.00 31.21 3.33
2434 2817 2.914695 AGGCGGTAACTGTACACAAA 57.085 45.000 0.00 0.00 31.21 2.83
2435 2818 2.486918 AGGCGGTAACTGTACACAAAC 58.513 47.619 0.00 0.00 31.21 2.93
2436 2819 2.103601 AGGCGGTAACTGTACACAAACT 59.896 45.455 0.00 0.00 31.21 2.66
2437 2820 3.321682 AGGCGGTAACTGTACACAAACTA 59.678 43.478 0.00 0.00 31.21 2.24
2438 2821 4.020839 AGGCGGTAACTGTACACAAACTAT 60.021 41.667 0.00 0.00 31.21 2.12
2439 2822 4.092383 GGCGGTAACTGTACACAAACTATG 59.908 45.833 0.00 0.00 31.21 2.23
2440 2823 4.687483 GCGGTAACTGTACACAAACTATGT 59.313 41.667 0.00 0.00 45.34 2.29
2453 2836 6.084326 ACAAACTATGTGACAAATGTTCCC 57.916 37.500 0.00 0.00 41.93 3.97
2454 2837 5.596361 ACAAACTATGTGACAAATGTTCCCA 59.404 36.000 0.00 0.00 41.93 4.37
2455 2838 5.705609 AACTATGTGACAAATGTTCCCAC 57.294 39.130 0.00 0.00 0.00 4.61
2456 2839 4.985538 ACTATGTGACAAATGTTCCCACT 58.014 39.130 0.00 0.00 0.00 4.00
2457 2840 5.385198 ACTATGTGACAAATGTTCCCACTT 58.615 37.500 0.00 0.00 0.00 3.16
2458 2841 6.539173 ACTATGTGACAAATGTTCCCACTTA 58.461 36.000 0.00 0.00 0.00 2.24
2459 2842 7.001674 ACTATGTGACAAATGTTCCCACTTAA 58.998 34.615 0.00 0.00 0.00 1.85
2460 2843 6.723298 ATGTGACAAATGTTCCCACTTAAA 57.277 33.333 0.00 0.00 0.00 1.52
2461 2844 6.531503 TGTGACAAATGTTCCCACTTAAAA 57.468 33.333 0.00 0.00 0.00 1.52
2462 2845 6.936279 TGTGACAAATGTTCCCACTTAAAAA 58.064 32.000 0.00 0.00 0.00 1.94
2463 2846 7.560368 TGTGACAAATGTTCCCACTTAAAAAT 58.440 30.769 0.00 0.00 0.00 1.82
2464 2847 7.493971 TGTGACAAATGTTCCCACTTAAAAATG 59.506 33.333 0.00 0.00 0.00 2.32
2465 2848 6.989169 TGACAAATGTTCCCACTTAAAAATGG 59.011 34.615 0.00 0.00 35.59 3.16
2466 2849 5.762711 ACAAATGTTCCCACTTAAAAATGGC 59.237 36.000 0.00 0.00 34.37 4.40
2467 2850 5.559148 AATGTTCCCACTTAAAAATGGCA 57.441 34.783 0.00 0.00 34.37 4.92
2468 2851 4.329462 TGTTCCCACTTAAAAATGGCAC 57.671 40.909 0.00 0.00 34.37 5.01
2469 2852 3.964031 TGTTCCCACTTAAAAATGGCACT 59.036 39.130 0.00 0.00 34.37 4.40
2470 2853 5.141182 TGTTCCCACTTAAAAATGGCACTA 58.859 37.500 0.00 0.00 34.37 2.74
2471 2854 5.777732 TGTTCCCACTTAAAAATGGCACTAT 59.222 36.000 0.00 0.00 34.37 2.12
2472 2855 5.913137 TCCCACTTAAAAATGGCACTATG 57.087 39.130 0.00 0.00 34.37 2.23
2473 2856 5.329399 TCCCACTTAAAAATGGCACTATGT 58.671 37.500 0.00 0.00 34.37 2.29
2474 2857 5.184864 TCCCACTTAAAAATGGCACTATGTG 59.815 40.000 0.00 0.00 34.37 3.21
2475 2858 5.184864 CCCACTTAAAAATGGCACTATGTGA 59.815 40.000 1.52 0.00 34.94 3.58
2476 2859 6.127366 CCCACTTAAAAATGGCACTATGTGAT 60.127 38.462 1.52 0.00 34.94 3.06
2477 2860 7.068103 CCCACTTAAAAATGGCACTATGTGATA 59.932 37.037 1.52 0.00 34.94 2.15
2478 2861 8.465999 CCACTTAAAAATGGCACTATGTGATAA 58.534 33.333 1.52 0.00 35.23 1.75
2479 2862 9.289303 CACTTAAAAATGGCACTATGTGATAAC 57.711 33.333 1.52 0.00 35.23 1.89
2480 2863 9.019656 ACTTAAAAATGGCACTATGTGATAACA 57.980 29.630 1.52 0.00 35.23 2.41
2486 2869 9.578576 AAATGGCACTATGTGATAACATAATCT 57.421 29.630 4.42 0.00 35.23 2.40
2487 2870 7.967890 TGGCACTATGTGATAACATAATCTG 57.032 36.000 4.42 2.13 35.23 2.90
2488 2871 6.936335 TGGCACTATGTGATAACATAATCTGG 59.064 38.462 4.42 0.00 35.23 3.86
2489 2872 6.128172 GGCACTATGTGATAACATAATCTGGC 60.128 42.308 4.42 8.20 35.23 4.85
2490 2873 6.427853 GCACTATGTGATAACATAATCTGGCA 59.572 38.462 4.42 0.00 35.23 4.92
2491 2874 7.041167 GCACTATGTGATAACATAATCTGGCAA 60.041 37.037 4.42 0.00 35.23 4.52
2492 2875 8.285394 CACTATGTGATAACATAATCTGGCAAC 58.715 37.037 4.42 0.00 35.23 4.17
2493 2876 8.213679 ACTATGTGATAACATAATCTGGCAACT 58.786 33.333 4.42 0.00 32.84 3.16
2494 2877 7.886629 ATGTGATAACATAATCTGGCAACTT 57.113 32.000 0.00 0.00 37.61 2.66
2495 2878 7.087409 TGTGATAACATAATCTGGCAACTTG 57.913 36.000 0.00 0.00 37.61 3.16
2496 2879 6.658816 TGTGATAACATAATCTGGCAACTTGT 59.341 34.615 0.00 0.00 37.61 3.16
2497 2880 6.968904 GTGATAACATAATCTGGCAACTTGTG 59.031 38.462 0.00 0.00 37.61 3.33
2498 2881 6.883756 TGATAACATAATCTGGCAACTTGTGA 59.116 34.615 10.89 0.00 37.61 3.58
2499 2882 5.376854 AACATAATCTGGCAACTTGTGAC 57.623 39.130 10.89 0.00 34.82 3.67
2500 2883 3.436704 ACATAATCTGGCAACTTGTGACG 59.563 43.478 10.89 0.00 38.59 4.35
2501 2884 2.254546 AATCTGGCAACTTGTGACGA 57.745 45.000 0.00 0.00 38.59 4.20
2502 2885 1.512926 ATCTGGCAACTTGTGACGAC 58.487 50.000 0.00 0.00 38.59 4.34
2503 2886 0.176910 TCTGGCAACTTGTGACGACA 59.823 50.000 0.00 0.00 38.59 4.35
2504 2887 1.013596 CTGGCAACTTGTGACGACAA 58.986 50.000 0.00 0.00 38.59 3.18
2505 2888 1.400142 CTGGCAACTTGTGACGACAAA 59.600 47.619 0.00 0.00 41.62 2.83
2506 2889 1.813178 TGGCAACTTGTGACGACAAAA 59.187 42.857 0.00 0.00 41.62 2.44
2507 2890 2.159448 TGGCAACTTGTGACGACAAAAG 60.159 45.455 15.00 15.00 44.42 2.27
2508 2891 2.096819 GGCAACTTGTGACGACAAAAGA 59.903 45.455 22.00 0.00 42.25 2.52
2509 2892 3.426963 GGCAACTTGTGACGACAAAAGAA 60.427 43.478 22.00 0.00 42.25 2.52
2510 2893 4.162812 GCAACTTGTGACGACAAAAGAAA 58.837 39.130 22.00 0.00 42.25 2.52
2511 2894 4.798387 GCAACTTGTGACGACAAAAGAAAT 59.202 37.500 22.00 7.12 42.25 2.17
2512 2895 5.052370 GCAACTTGTGACGACAAAAGAAATC 60.052 40.000 22.00 6.59 42.25 2.17
2513 2896 5.811399 ACTTGTGACGACAAAAGAAATCA 57.189 34.783 22.00 0.00 42.25 2.57
2514 2897 5.569413 ACTTGTGACGACAAAAGAAATCAC 58.431 37.500 22.00 6.66 42.25 3.06
2515 2898 5.354234 ACTTGTGACGACAAAAGAAATCACT 59.646 36.000 22.00 0.00 42.25 3.41
2516 2899 5.155509 TGTGACGACAAAAGAAATCACTG 57.844 39.130 0.00 0.00 37.83 3.66
2517 2900 4.873259 TGTGACGACAAAAGAAATCACTGA 59.127 37.500 0.00 0.00 37.83 3.41
2518 2901 5.352846 TGTGACGACAAAAGAAATCACTGAA 59.647 36.000 0.00 0.00 37.83 3.02
2519 2902 5.904080 GTGACGACAAAAGAAATCACTGAAG 59.096 40.000 0.00 0.00 34.86 3.02
2520 2903 4.848757 ACGACAAAAGAAATCACTGAAGC 58.151 39.130 0.00 0.00 0.00 3.86
2521 2904 4.335315 ACGACAAAAGAAATCACTGAAGCA 59.665 37.500 0.00 0.00 0.00 3.91
2522 2905 4.672413 CGACAAAAGAAATCACTGAAGCAC 59.328 41.667 0.00 0.00 0.00 4.40
2523 2906 4.601019 ACAAAAGAAATCACTGAAGCACG 58.399 39.130 0.00 0.00 0.00 5.34
2524 2907 4.096382 ACAAAAGAAATCACTGAAGCACGT 59.904 37.500 0.00 0.00 0.00 4.49
2525 2908 4.474226 AAAGAAATCACTGAAGCACGTC 57.526 40.909 0.00 0.00 0.00 4.34
2526 2909 3.111853 AGAAATCACTGAAGCACGTCA 57.888 42.857 0.00 0.00 0.00 4.35
2527 2910 3.466836 AGAAATCACTGAAGCACGTCAA 58.533 40.909 0.00 0.00 0.00 3.18
2528 2911 3.248602 AGAAATCACTGAAGCACGTCAAC 59.751 43.478 0.00 0.00 0.00 3.18
2529 2912 1.139989 ATCACTGAAGCACGTCAACG 58.860 50.000 0.12 0.12 46.33 4.10
2547 2930 1.798813 ACGTGAGATCGTTTGAAAGCC 59.201 47.619 0.00 0.00 41.37 4.35
2548 2931 1.128692 CGTGAGATCGTTTGAAAGCCC 59.871 52.381 0.00 0.00 0.00 5.19
2549 2932 2.427506 GTGAGATCGTTTGAAAGCCCT 58.572 47.619 0.00 0.00 0.00 5.19
2550 2933 2.416893 GTGAGATCGTTTGAAAGCCCTC 59.583 50.000 0.00 0.00 0.00 4.30
2551 2934 2.303022 TGAGATCGTTTGAAAGCCCTCT 59.697 45.455 0.00 0.00 0.00 3.69
2552 2935 2.933260 GAGATCGTTTGAAAGCCCTCTC 59.067 50.000 0.00 0.00 0.00 3.20
2553 2936 1.661112 GATCGTTTGAAAGCCCTCTCG 59.339 52.381 0.00 0.00 0.00 4.04
2554 2937 0.320421 TCGTTTGAAAGCCCTCTCGG 60.320 55.000 0.00 0.00 0.00 4.63
2555 2938 0.320421 CGTTTGAAAGCCCTCTCGGA 60.320 55.000 0.00 0.00 0.00 4.55
2556 2939 1.443802 GTTTGAAAGCCCTCTCGGAG 58.556 55.000 0.00 0.00 0.00 4.63
2566 2949 4.436368 TCTCGGAGGAGAACCCAC 57.564 61.111 4.96 0.00 46.11 4.61
2567 2950 1.305046 TCTCGGAGGAGAACCCACC 60.305 63.158 4.96 0.00 46.11 4.61
2571 2954 2.663196 GAGGAGAACCCACCGGTG 59.337 66.667 28.26 28.26 43.71 4.94
2572 2955 1.911766 GAGGAGAACCCACCGGTGA 60.912 63.158 36.07 0.00 43.71 4.02
2573 2956 1.460689 AGGAGAACCCACCGGTGAA 60.461 57.895 36.07 0.00 43.71 3.18
2574 2957 1.057851 AGGAGAACCCACCGGTGAAA 61.058 55.000 36.07 0.00 43.71 2.69
2575 2958 0.605589 GGAGAACCCACCGGTGAAAG 60.606 60.000 36.07 24.28 43.71 2.62
2576 2959 0.395312 GAGAACCCACCGGTGAAAGA 59.605 55.000 36.07 0.00 43.71 2.52
2577 2960 0.841289 AGAACCCACCGGTGAAAGAA 59.159 50.000 36.07 0.00 43.71 2.52
2578 2961 1.213430 AGAACCCACCGGTGAAAGAAA 59.787 47.619 36.07 0.00 43.71 2.52
2579 2962 1.607148 GAACCCACCGGTGAAAGAAAG 59.393 52.381 36.07 16.57 43.71 2.62
2580 2963 0.179001 ACCCACCGGTGAAAGAAAGG 60.179 55.000 36.07 26.33 42.48 3.11
2581 2964 1.524008 CCCACCGGTGAAAGAAAGGC 61.524 60.000 36.07 0.00 0.00 4.35
2582 2965 1.524008 CCACCGGTGAAAGAAAGGCC 61.524 60.000 36.07 0.00 0.00 5.19
2583 2966 1.599797 ACCGGTGAAAGAAAGGCCG 60.600 57.895 6.12 0.00 41.82 6.13
2584 2967 2.561373 CGGTGAAAGAAAGGCCGC 59.439 61.111 0.00 0.00 35.90 6.53
2585 2968 1.966451 CGGTGAAAGAAAGGCCGCT 60.966 57.895 0.00 0.00 35.90 5.52
2586 2969 0.672401 CGGTGAAAGAAAGGCCGCTA 60.672 55.000 0.00 0.00 35.90 4.26
2587 2970 1.530323 GGTGAAAGAAAGGCCGCTAA 58.470 50.000 0.00 0.00 0.00 3.09
2588 2971 2.092323 GGTGAAAGAAAGGCCGCTAAT 58.908 47.619 0.00 0.00 0.00 1.73
2589 2972 2.097629 GGTGAAAGAAAGGCCGCTAATC 59.902 50.000 0.00 0.08 0.00 1.75
2590 2973 2.006888 TGAAAGAAAGGCCGCTAATCG 58.993 47.619 0.00 0.00 38.08 3.34
2603 2986 3.857194 CGCTAATCGGATTAACGGTTTG 58.143 45.455 20.29 6.22 38.32 2.93
2604 2987 3.614588 GCTAATCGGATTAACGGTTTGC 58.385 45.455 11.32 6.13 45.08 3.68
2605 2988 2.817538 AATCGGATTAACGGTTTGCG 57.182 45.000 0.34 0.00 32.43 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 73 5.616488 TTACCACGCTTTATTTCCTCAAC 57.384 39.130 0.00 0.00 0.00 3.18
73 74 5.766174 ACTTTACCACGCTTTATTTCCTCAA 59.234 36.000 0.00 0.00 0.00 3.02
77 78 5.874895 AGACTTTACCACGCTTTATTTCC 57.125 39.130 0.00 0.00 0.00 3.13
87 88 5.396484 TCGATTGTTCTAGACTTTACCACG 58.604 41.667 0.00 0.00 0.00 4.94
107 108 0.250295 CAAACCAAGGCACTCCTCGA 60.250 55.000 0.00 0.00 43.40 4.04
263 267 7.105588 TGAAGATTGAGAGCTTAAGCACAATA 58.894 34.615 29.18 19.36 45.16 1.90
317 321 7.492524 TGTTAGTCACTGAATATCATCTCCAC 58.507 38.462 0.00 0.00 0.00 4.02
333 337 4.275936 ACAAATCCAAGCACTGTTAGTCAC 59.724 41.667 0.00 0.00 0.00 3.67
341 345 3.928727 ATGTGACAAATCCAAGCACTG 57.071 42.857 0.00 0.00 0.00 3.66
528 532 6.462552 TGTTGGTCATTGTTTTCAAGATCA 57.537 33.333 0.00 0.00 43.41 2.92
552 556 5.075858 TCTCATTTCATGTTTTCCCATGC 57.924 39.130 0.00 0.00 41.60 4.06
570 574 7.267128 TCGGTAGTTTTTGTTAAAGTCTCTCA 58.733 34.615 0.00 0.00 0.00 3.27
593 598 1.729131 GCAACACCCACGCATTTCG 60.729 57.895 0.00 0.00 45.38 3.46
594 599 1.372872 GGCAACACCCACGCATTTC 60.373 57.895 0.00 0.00 0.00 2.17
602 607 0.759959 TTTACTCGAGGCAACACCCA 59.240 50.000 18.41 0.00 40.58 4.51
605 610 1.719780 CGTCTTTACTCGAGGCAACAC 59.280 52.381 18.41 6.69 41.41 3.32
615 620 6.074005 CAGAAATCTTGTTGCGTCTTTACTC 58.926 40.000 0.00 0.00 0.00 2.59
625 630 6.414987 GTGTAAACTCACAGAAATCTTGTTGC 59.585 38.462 0.00 0.00 38.12 4.17
629 634 7.432252 GGTTTGTGTAAACTCACAGAAATCTTG 59.568 37.037 2.49 0.00 46.66 3.02
661 666 7.784037 TCATGGTATTGAGAAAATTCCCAATG 58.216 34.615 11.70 0.00 36.48 2.82
728 733 7.703328 TCGGATTTCTTCATTTTTGCTATACC 58.297 34.615 0.00 0.00 0.00 2.73
731 736 8.352942 GGTATCGGATTTCTTCATTTTTGCTAT 58.647 33.333 0.00 0.00 0.00 2.97
732 737 7.338196 TGGTATCGGATTTCTTCATTTTTGCTA 59.662 33.333 0.00 0.00 0.00 3.49
772 826 9.953697 TTAATTAATTAAGCGTCACAACAAAGT 57.046 25.926 15.19 0.00 0.00 2.66
892 959 0.107654 AGCAACGCTATCAGGTTCCC 60.108 55.000 0.00 0.00 36.99 3.97
1018 1115 2.673862 CAACCGTACGTGGATTATTGCA 59.326 45.455 15.21 0.00 0.00 4.08
1045 1142 5.023533 TCTATGTATCTTGCTGGTGAACC 57.976 43.478 0.00 0.00 0.00 3.62
1087 1187 0.242825 TGCTCAATCTTGCTTGCTGC 59.757 50.000 0.00 0.00 43.25 5.25
1088 1188 2.941453 ATGCTCAATCTTGCTTGCTG 57.059 45.000 0.00 0.00 0.00 4.41
1133 1233 3.529341 AACACCGATGACGCCTGCA 62.529 57.895 0.00 0.00 38.29 4.41
1361 1461 3.771491 CCTCGTCGTCGTCGTCGT 61.771 66.667 18.44 0.00 45.27 4.34
1362 1462 3.771491 ACCTCGTCGTCGTCGTCG 61.771 66.667 14.18 14.18 46.06 5.12
1363 1463 2.202146 CACCTCGTCGTCGTCGTC 60.202 66.667 11.41 0.00 38.33 4.20
1364 1464 2.662857 TCACCTCGTCGTCGTCGT 60.663 61.111 11.41 0.00 38.33 4.34
1539 1648 4.351938 CCGTCGCCGTTGAGGTCA 62.352 66.667 0.00 0.00 43.70 4.02
1610 1719 5.391950 CGAACGAATGAAATGAAACCATCCT 60.392 40.000 0.00 0.00 0.00 3.24
1613 1722 4.082787 AGCGAACGAATGAAATGAAACCAT 60.083 37.500 0.00 0.00 0.00 3.55
1640 1749 7.206981 ACCACATGTCAAAAATACAGAAGAG 57.793 36.000 0.00 0.00 0.00 2.85
1649 1758 4.405116 ACTGCAACCACATGTCAAAAAT 57.595 36.364 0.00 0.00 0.00 1.82
1704 2067 0.698238 TAAGCATCACACCCAAGCCT 59.302 50.000 0.00 0.00 0.00 4.58
1823 2190 9.599866 CCAGATTGTTATCAATGAACTACAGTA 57.400 33.333 3.74 0.00 43.33 2.74
1824 2191 8.103305 ACCAGATTGTTATCAATGAACTACAGT 58.897 33.333 3.74 0.00 43.33 3.55
1842 2209 9.806203 TGCTTAAAATAATCATGAACCAGATTG 57.194 29.630 0.00 0.00 36.07 2.67
1848 2215 9.382275 ACCATTTGCTTAAAATAATCATGAACC 57.618 29.630 0.00 0.00 36.28 3.62
1899 2266 8.870116 AGGCCAATATCCTTTATTATTTGTTCC 58.130 33.333 5.01 0.00 0.00 3.62
1903 2270 7.899973 AGCAGGCCAATATCCTTTATTATTTG 58.100 34.615 5.01 0.00 0.00 2.32
1938 2318 0.988063 AAGGGGAGAAGGAAGTGAGC 59.012 55.000 0.00 0.00 0.00 4.26
1953 2333 3.432933 GTGTTATTGTTGCATGCAAAGGG 59.567 43.478 33.42 0.00 37.70 3.95
1969 2349 7.643569 TTTTGGTATCATGCTCATGTGTTAT 57.356 32.000 9.41 0.00 39.72 1.89
2015 2398 9.724839 TTAACGGTTTGAGAGATAAACTTTTTG 57.275 29.630 0.00 0.00 37.96 2.44
2020 2403 6.649557 CAGGTTAACGGTTTGAGAGATAAACT 59.350 38.462 0.00 0.00 37.96 2.66
2021 2404 6.128363 CCAGGTTAACGGTTTGAGAGATAAAC 60.128 42.308 0.00 0.00 37.31 2.01
2022 2405 5.935789 CCAGGTTAACGGTTTGAGAGATAAA 59.064 40.000 0.00 0.00 0.00 1.40
2023 2406 5.012354 ACCAGGTTAACGGTTTGAGAGATAA 59.988 40.000 0.00 0.00 28.43 1.75
2024 2407 4.529377 ACCAGGTTAACGGTTTGAGAGATA 59.471 41.667 0.00 0.00 28.43 1.98
2025 2408 3.326880 ACCAGGTTAACGGTTTGAGAGAT 59.673 43.478 0.00 0.00 28.43 2.75
2026 2409 2.701951 ACCAGGTTAACGGTTTGAGAGA 59.298 45.455 0.00 0.00 28.43 3.10
2027 2410 3.064931 GACCAGGTTAACGGTTTGAGAG 58.935 50.000 6.63 0.00 34.99 3.20
2038 2421 1.865788 CGGACCGTCGACCAGGTTAA 61.866 60.000 15.18 0.00 41.51 2.01
2040 2423 3.677648 CGGACCGTCGACCAGGTT 61.678 66.667 15.18 1.39 41.51 3.50
2048 2431 0.806102 ATGATGAAAGCGGACCGTCG 60.806 55.000 16.73 0.00 0.00 5.12
2058 2441 5.427082 GCGTGACGAAGATAATGATGAAAG 58.573 41.667 10.10 0.00 0.00 2.62
2074 2457 2.570468 TTCAAAAATCTCGCGTGACG 57.430 45.000 13.75 0.00 45.62 4.35
2075 2458 3.873529 AGTTTCAAAAATCTCGCGTGAC 58.126 40.909 13.75 0.00 0.00 3.67
2076 2459 5.660629 TTAGTTTCAAAAATCTCGCGTGA 57.339 34.783 13.84 13.84 0.00 4.35
2077 2460 6.032460 GGATTTAGTTTCAAAAATCTCGCGTG 59.968 38.462 5.77 3.13 40.41 5.34
2078 2461 6.084277 GGATTTAGTTTCAAAAATCTCGCGT 58.916 36.000 5.77 0.00 40.41 6.01
2079 2462 5.511729 GGGATTTAGTTTCAAAAATCTCGCG 59.488 40.000 0.00 0.00 40.41 5.87
2080 2463 6.386654 TGGGATTTAGTTTCAAAAATCTCGC 58.613 36.000 7.49 0.00 42.85 5.03
2081 2464 8.028938 ACATGGGATTTAGTTTCAAAAATCTCG 58.971 33.333 0.00 0.00 42.85 4.04
2082 2465 9.358872 GACATGGGATTTAGTTTCAAAAATCTC 57.641 33.333 0.00 4.68 41.15 2.75
2083 2466 8.028938 CGACATGGGATTTAGTTTCAAAAATCT 58.971 33.333 0.00 0.00 40.41 2.40
2084 2467 7.275560 CCGACATGGGATTTAGTTTCAAAAATC 59.724 37.037 0.00 0.00 40.03 2.17
2085 2468 7.039363 TCCGACATGGGATTTAGTTTCAAAAAT 60.039 33.333 0.00 0.00 38.76 1.82
2086 2469 6.265649 TCCGACATGGGATTTAGTTTCAAAAA 59.734 34.615 0.00 0.00 38.76 1.94
2087 2470 5.770663 TCCGACATGGGATTTAGTTTCAAAA 59.229 36.000 0.00 0.00 38.76 2.44
2088 2471 5.317808 TCCGACATGGGATTTAGTTTCAAA 58.682 37.500 0.00 0.00 38.76 2.69
2089 2472 4.912586 TCCGACATGGGATTTAGTTTCAA 58.087 39.130 0.00 0.00 38.76 2.69
2090 2473 4.561500 TCCGACATGGGATTTAGTTTCA 57.438 40.909 0.00 0.00 38.76 2.69
2091 2474 5.588648 TCATTCCGACATGGGATTTAGTTTC 59.411 40.000 0.00 0.00 31.33 2.78
2092 2475 5.505780 TCATTCCGACATGGGATTTAGTTT 58.494 37.500 0.00 0.00 31.33 2.66
2093 2476 5.110814 TCATTCCGACATGGGATTTAGTT 57.889 39.130 0.00 0.00 31.33 2.24
2094 2477 4.771114 TCATTCCGACATGGGATTTAGT 57.229 40.909 0.00 0.00 31.33 2.24
2095 2478 6.639632 AAATCATTCCGACATGGGATTTAG 57.360 37.500 0.00 0.00 35.57 1.85
2096 2479 8.704849 ATTAAATCATTCCGACATGGGATTTA 57.295 30.769 0.00 0.00 37.35 1.40
2097 2480 7.601705 ATTAAATCATTCCGACATGGGATTT 57.398 32.000 0.00 0.00 38.70 2.17
2098 2481 7.601705 AATTAAATCATTCCGACATGGGATT 57.398 32.000 0.00 0.00 31.33 3.01
2099 2482 7.944554 AGTAATTAAATCATTCCGACATGGGAT 59.055 33.333 0.00 0.00 35.74 3.85
2100 2483 7.287061 AGTAATTAAATCATTCCGACATGGGA 58.713 34.615 0.00 0.00 38.76 4.37
2101 2484 7.510549 AGTAATTAAATCATTCCGACATGGG 57.489 36.000 0.00 0.00 38.76 4.00
2102 2485 9.801873 AAAAGTAATTAAATCATTCCGACATGG 57.198 29.630 0.00 0.00 40.09 3.66
2127 2510 7.101054 AGTAATGTGGCTAGTATCGACAAAAA 58.899 34.615 0.00 0.00 0.00 1.94
2128 2511 6.636705 AGTAATGTGGCTAGTATCGACAAAA 58.363 36.000 0.00 0.00 0.00 2.44
2129 2512 6.216801 AGTAATGTGGCTAGTATCGACAAA 57.783 37.500 0.00 0.00 0.00 2.83
2130 2513 5.847111 AGTAATGTGGCTAGTATCGACAA 57.153 39.130 0.00 0.00 0.00 3.18
2131 2514 6.713450 TGATAGTAATGTGGCTAGTATCGACA 59.287 38.462 0.00 0.00 35.65 4.35
2132 2515 7.022384 GTGATAGTAATGTGGCTAGTATCGAC 58.978 42.308 0.00 0.00 35.65 4.20
2133 2516 6.940867 AGTGATAGTAATGTGGCTAGTATCGA 59.059 38.462 0.00 0.00 35.65 3.59
2134 2517 7.147143 AGTGATAGTAATGTGGCTAGTATCG 57.853 40.000 0.00 0.00 35.65 2.92
2140 2523 9.991906 GGTAAATAAGTGATAGTAATGTGGCTA 57.008 33.333 0.00 0.00 0.00 3.93
2141 2524 8.491134 TGGTAAATAAGTGATAGTAATGTGGCT 58.509 33.333 0.00 0.00 0.00 4.75
2142 2525 8.671384 TGGTAAATAAGTGATAGTAATGTGGC 57.329 34.615 0.00 0.00 0.00 5.01
2164 2547 9.899661 TGACAACTAAATAGCTAATAACATGGT 57.100 29.630 0.00 0.00 0.00 3.55
2179 2562 9.398170 CGACTTTCATCAATTTGACAACTAAAT 57.602 29.630 0.15 0.00 0.00 1.40
2180 2563 8.616942 TCGACTTTCATCAATTTGACAACTAAA 58.383 29.630 0.15 0.00 0.00 1.85
2181 2564 8.148807 TCGACTTTCATCAATTTGACAACTAA 57.851 30.769 0.15 0.00 0.00 2.24
2182 2565 7.722795 TCGACTTTCATCAATTTGACAACTA 57.277 32.000 0.15 0.00 0.00 2.24
2183 2566 6.618287 TCGACTTTCATCAATTTGACAACT 57.382 33.333 0.15 0.00 0.00 3.16
2186 2569 9.599866 AGTATATCGACTTTCATCAATTTGACA 57.400 29.630 0.15 0.00 0.00 3.58
2188 2571 9.816354 TGAGTATATCGACTTTCATCAATTTGA 57.184 29.630 0.75 0.75 0.00 2.69
2210 2593 9.372369 GCATACTGTAAAGTCTTTTAGATGAGT 57.628 33.333 2.51 0.73 29.71 3.41
2211 2594 8.821894 GGCATACTGTAAAGTCTTTTAGATGAG 58.178 37.037 2.51 0.00 29.71 2.90
2212 2595 8.540388 AGGCATACTGTAAAGTCTTTTAGATGA 58.460 33.333 2.51 0.00 29.71 2.92
2213 2596 8.723942 AGGCATACTGTAAAGTCTTTTAGATG 57.276 34.615 2.51 9.10 29.71 2.90
2214 2597 7.988028 GGAGGCATACTGTAAAGTCTTTTAGAT 59.012 37.037 2.51 0.00 29.71 1.98
2215 2598 7.328737 GGAGGCATACTGTAAAGTCTTTTAGA 58.671 38.462 2.51 0.00 29.71 2.10
2216 2599 6.255887 CGGAGGCATACTGTAAAGTCTTTTAG 59.744 42.308 2.51 5.57 29.71 1.85
2217 2600 6.103997 CGGAGGCATACTGTAAAGTCTTTTA 58.896 40.000 2.51 0.00 0.00 1.52
2218 2601 4.935808 CGGAGGCATACTGTAAAGTCTTTT 59.064 41.667 2.51 0.00 0.00 2.27
2219 2602 4.020485 ACGGAGGCATACTGTAAAGTCTTT 60.020 41.667 2.81 2.81 0.00 2.52
2220 2603 3.514309 ACGGAGGCATACTGTAAAGTCTT 59.486 43.478 0.00 0.00 0.00 3.01
2221 2604 3.097614 ACGGAGGCATACTGTAAAGTCT 58.902 45.455 0.00 0.00 0.00 3.24
2222 2605 3.445857 GACGGAGGCATACTGTAAAGTC 58.554 50.000 0.00 0.00 0.00 3.01
2223 2606 2.167900 GGACGGAGGCATACTGTAAAGT 59.832 50.000 0.00 0.00 0.00 2.66
2224 2607 2.483188 GGGACGGAGGCATACTGTAAAG 60.483 54.545 0.00 0.00 0.00 1.85
2225 2608 1.483415 GGGACGGAGGCATACTGTAAA 59.517 52.381 0.00 0.00 0.00 2.01
2226 2609 1.117150 GGGACGGAGGCATACTGTAA 58.883 55.000 0.00 0.00 0.00 2.41
2227 2610 2.816746 GGGACGGAGGCATACTGTA 58.183 57.895 0.00 0.00 0.00 2.74
2228 2611 3.630289 GGGACGGAGGCATACTGT 58.370 61.111 0.00 0.00 0.00 3.55
2242 2625 9.749340 TGTATCTAGATCATAGTAAATTCGGGA 57.251 33.333 8.95 0.00 0.00 5.14
2253 2636 9.531942 GCAGAAATGGATGTATCTAGATCATAG 57.468 37.037 8.95 0.06 0.00 2.23
2254 2637 8.193438 CGCAGAAATGGATGTATCTAGATCATA 58.807 37.037 8.95 0.00 0.00 2.15
2255 2638 7.040494 CGCAGAAATGGATGTATCTAGATCAT 58.960 38.462 8.95 12.18 0.00 2.45
2256 2639 6.393171 CGCAGAAATGGATGTATCTAGATCA 58.607 40.000 8.95 7.83 0.00 2.92
2257 2640 5.809562 CCGCAGAAATGGATGTATCTAGATC 59.190 44.000 8.95 2.00 0.00 2.75
2258 2641 5.728471 CCGCAGAAATGGATGTATCTAGAT 58.272 41.667 10.73 10.73 0.00 1.98
2259 2642 4.561530 GCCGCAGAAATGGATGTATCTAGA 60.562 45.833 0.00 0.00 0.00 2.43
2260 2643 3.681897 GCCGCAGAAATGGATGTATCTAG 59.318 47.826 0.00 0.00 0.00 2.43
2261 2644 3.070878 TGCCGCAGAAATGGATGTATCTA 59.929 43.478 0.00 0.00 0.00 1.98
2262 2645 2.158769 TGCCGCAGAAATGGATGTATCT 60.159 45.455 0.00 0.00 0.00 1.98
2263 2646 2.221169 TGCCGCAGAAATGGATGTATC 58.779 47.619 0.00 0.00 0.00 2.24
2264 2647 2.346766 TGCCGCAGAAATGGATGTAT 57.653 45.000 0.00 0.00 0.00 2.29
2265 2648 2.016318 CTTGCCGCAGAAATGGATGTA 58.984 47.619 0.00 0.00 0.00 2.29
2266 2649 0.813184 CTTGCCGCAGAAATGGATGT 59.187 50.000 0.00 0.00 0.00 3.06
2267 2650 0.813184 ACTTGCCGCAGAAATGGATG 59.187 50.000 0.00 0.00 0.00 3.51
2268 2651 2.418368 TACTTGCCGCAGAAATGGAT 57.582 45.000 0.00 0.00 0.00 3.41
2269 2652 2.192664 TTACTTGCCGCAGAAATGGA 57.807 45.000 0.00 0.00 0.00 3.41
2270 2653 3.119531 TGAATTACTTGCCGCAGAAATGG 60.120 43.478 0.00 0.00 0.00 3.16
2271 2654 4.095410 TGAATTACTTGCCGCAGAAATG 57.905 40.909 0.00 0.00 0.00 2.32
2272 2655 4.009675 TCTGAATTACTTGCCGCAGAAAT 58.990 39.130 0.00 0.00 30.26 2.17
2273 2656 3.407698 TCTGAATTACTTGCCGCAGAAA 58.592 40.909 0.00 0.00 30.26 2.52
2274 2657 3.052455 TCTGAATTACTTGCCGCAGAA 57.948 42.857 0.00 0.00 30.26 3.02
2275 2658 2.742053 GTTCTGAATTACTTGCCGCAGA 59.258 45.455 0.00 0.00 0.00 4.26
2276 2659 2.474526 CGTTCTGAATTACTTGCCGCAG 60.475 50.000 0.00 0.00 0.00 5.18
2277 2660 1.463056 CGTTCTGAATTACTTGCCGCA 59.537 47.619 0.00 0.00 0.00 5.69
2278 2661 1.730064 TCGTTCTGAATTACTTGCCGC 59.270 47.619 0.00 0.00 0.00 6.53
2279 2662 3.181520 CCTTCGTTCTGAATTACTTGCCG 60.182 47.826 0.00 0.00 35.63 5.69
2280 2663 3.127030 CCCTTCGTTCTGAATTACTTGCC 59.873 47.826 0.00 0.00 35.63 4.52
2281 2664 4.000988 TCCCTTCGTTCTGAATTACTTGC 58.999 43.478 0.00 0.00 35.63 4.01
2282 2665 5.238583 ACTCCCTTCGTTCTGAATTACTTG 58.761 41.667 0.00 0.00 35.63 3.16
2283 2666 5.485209 ACTCCCTTCGTTCTGAATTACTT 57.515 39.130 0.00 0.00 35.63 2.24
2284 2667 5.715753 AGTACTCCCTTCGTTCTGAATTACT 59.284 40.000 0.00 0.00 35.63 2.24
2285 2668 5.963594 AGTACTCCCTTCGTTCTGAATTAC 58.036 41.667 0.00 0.00 35.63 1.89
2286 2669 6.014840 ACAAGTACTCCCTTCGTTCTGAATTA 60.015 38.462 0.00 0.00 35.63 1.40
2287 2670 5.221661 ACAAGTACTCCCTTCGTTCTGAATT 60.222 40.000 0.00 0.00 35.63 2.17
2288 2671 4.283722 ACAAGTACTCCCTTCGTTCTGAAT 59.716 41.667 0.00 0.00 35.63 2.57
2289 2672 3.640029 ACAAGTACTCCCTTCGTTCTGAA 59.360 43.478 0.00 0.00 34.74 3.02
2290 2673 3.005472 CACAAGTACTCCCTTCGTTCTGA 59.995 47.826 0.00 0.00 0.00 3.27
2291 2674 3.243771 ACACAAGTACTCCCTTCGTTCTG 60.244 47.826 0.00 0.00 0.00 3.02
2292 2675 2.963782 ACACAAGTACTCCCTTCGTTCT 59.036 45.455 0.00 0.00 0.00 3.01
2293 2676 3.057734 CACACAAGTACTCCCTTCGTTC 58.942 50.000 0.00 0.00 0.00 3.95
2294 2677 2.224209 CCACACAAGTACTCCCTTCGTT 60.224 50.000 0.00 0.00 0.00 3.85
2295 2678 1.343465 CCACACAAGTACTCCCTTCGT 59.657 52.381 0.00 0.00 0.00 3.85
2296 2679 1.337823 CCCACACAAGTACTCCCTTCG 60.338 57.143 0.00 0.00 0.00 3.79
2297 2680 1.697982 ACCCACACAAGTACTCCCTTC 59.302 52.381 0.00 0.00 0.00 3.46
2298 2681 1.815757 ACCCACACAAGTACTCCCTT 58.184 50.000 0.00 0.00 0.00 3.95
2299 2682 1.420138 CAACCCACACAAGTACTCCCT 59.580 52.381 0.00 0.00 0.00 4.20
2300 2683 1.418637 TCAACCCACACAAGTACTCCC 59.581 52.381 0.00 0.00 0.00 4.30
2301 2684 2.922740 TCAACCCACACAAGTACTCC 57.077 50.000 0.00 0.00 0.00 3.85
2302 2685 5.978814 AGATATCAACCCACACAAGTACTC 58.021 41.667 5.32 0.00 0.00 2.59
2303 2686 5.721960 AGAGATATCAACCCACACAAGTACT 59.278 40.000 5.32 0.00 0.00 2.73
2304 2687 5.978814 AGAGATATCAACCCACACAAGTAC 58.021 41.667 5.32 0.00 0.00 2.73
2305 2688 6.440647 AGAAGAGATATCAACCCACACAAGTA 59.559 38.462 5.32 0.00 0.00 2.24
2306 2689 5.249393 AGAAGAGATATCAACCCACACAAGT 59.751 40.000 5.32 0.00 0.00 3.16
2307 2690 5.738909 AGAAGAGATATCAACCCACACAAG 58.261 41.667 5.32 0.00 0.00 3.16
2308 2691 5.762179 AGAAGAGATATCAACCCACACAA 57.238 39.130 5.32 0.00 0.00 3.33
2309 2692 5.762179 AAGAAGAGATATCAACCCACACA 57.238 39.130 5.32 0.00 0.00 3.72
2310 2693 6.879400 AGTAAGAAGAGATATCAACCCACAC 58.121 40.000 5.32 0.00 0.00 3.82
2311 2694 7.496346 AAGTAAGAAGAGATATCAACCCACA 57.504 36.000 5.32 0.00 0.00 4.17
2332 2715 9.998106 AGTGAGTATTCAAGTGTAACAATAAGT 57.002 29.630 0.00 0.00 41.43 2.24
2336 2719 8.993121 CAAGAGTGAGTATTCAAGTGTAACAAT 58.007 33.333 0.00 0.00 41.43 2.71
2337 2720 7.441157 CCAAGAGTGAGTATTCAAGTGTAACAA 59.559 37.037 0.00 0.00 41.43 2.83
2338 2721 6.929049 CCAAGAGTGAGTATTCAAGTGTAACA 59.071 38.462 0.00 0.00 41.43 2.41
2339 2722 6.369065 CCCAAGAGTGAGTATTCAAGTGTAAC 59.631 42.308 0.00 0.00 34.49 2.50
2340 2723 6.464222 CCCAAGAGTGAGTATTCAAGTGTAA 58.536 40.000 0.00 0.00 34.49 2.41
2341 2724 5.568825 GCCCAAGAGTGAGTATTCAAGTGTA 60.569 44.000 0.00 0.00 34.49 2.90
2342 2725 4.804261 GCCCAAGAGTGAGTATTCAAGTGT 60.804 45.833 0.00 0.00 34.49 3.55
2343 2726 3.686726 GCCCAAGAGTGAGTATTCAAGTG 59.313 47.826 0.00 0.00 34.49 3.16
2344 2727 3.584848 AGCCCAAGAGTGAGTATTCAAGT 59.415 43.478 0.00 0.00 34.49 3.16
2345 2728 4.187694 GAGCCCAAGAGTGAGTATTCAAG 58.812 47.826 0.00 0.00 34.49 3.02
2346 2729 3.582647 TGAGCCCAAGAGTGAGTATTCAA 59.417 43.478 0.00 0.00 34.49 2.69
2347 2730 3.173151 TGAGCCCAAGAGTGAGTATTCA 58.827 45.455 0.00 0.00 0.00 2.57
2348 2731 3.895232 TGAGCCCAAGAGTGAGTATTC 57.105 47.619 0.00 0.00 0.00 1.75
2349 2732 4.042187 ACTTTGAGCCCAAGAGTGAGTATT 59.958 41.667 0.00 0.00 33.23 1.89
2350 2733 3.584848 ACTTTGAGCCCAAGAGTGAGTAT 59.415 43.478 0.00 0.00 33.23 2.12
2351 2734 2.972713 ACTTTGAGCCCAAGAGTGAGTA 59.027 45.455 0.00 0.00 33.23 2.59
2352 2735 1.771255 ACTTTGAGCCCAAGAGTGAGT 59.229 47.619 0.00 0.00 33.23 3.41
2353 2736 2.557920 ACTTTGAGCCCAAGAGTGAG 57.442 50.000 0.00 0.00 33.23 3.51
2354 2737 4.640771 ATTACTTTGAGCCCAAGAGTGA 57.359 40.909 6.21 0.35 33.23 3.41
2355 2738 6.678900 GCAATATTACTTTGAGCCCAAGAGTG 60.679 42.308 6.21 0.00 33.23 3.51
2356 2739 5.358160 GCAATATTACTTTGAGCCCAAGAGT 59.642 40.000 0.00 2.50 33.23 3.24
2357 2740 5.357878 TGCAATATTACTTTGAGCCCAAGAG 59.642 40.000 0.00 0.00 33.23 2.85
2358 2741 5.260424 TGCAATATTACTTTGAGCCCAAGA 58.740 37.500 0.00 0.00 33.23 3.02
2359 2742 5.581126 TGCAATATTACTTTGAGCCCAAG 57.419 39.130 0.00 0.00 33.23 3.61
2360 2743 5.991933 TTGCAATATTACTTTGAGCCCAA 57.008 34.783 0.00 0.00 0.00 4.12
2361 2744 5.421693 ACATTGCAATATTACTTTGAGCCCA 59.578 36.000 12.53 0.00 0.00 5.36
2362 2745 5.906073 ACATTGCAATATTACTTTGAGCCC 58.094 37.500 12.53 0.00 0.00 5.19
2363 2746 7.832503 AAACATTGCAATATTACTTTGAGCC 57.167 32.000 12.53 0.00 0.00 4.70
2386 2769 9.627395 CCGGTCAATAATTGTGTATGTTTTTAA 57.373 29.630 0.00 0.00 0.00 1.52
2387 2770 8.794553 ACCGGTCAATAATTGTGTATGTTTTTA 58.205 29.630 0.00 0.00 0.00 1.52
2388 2771 7.662897 ACCGGTCAATAATTGTGTATGTTTTT 58.337 30.769 0.00 0.00 0.00 1.94
2389 2772 7.222000 ACCGGTCAATAATTGTGTATGTTTT 57.778 32.000 0.00 0.00 0.00 2.43
2390 2773 6.827586 ACCGGTCAATAATTGTGTATGTTT 57.172 33.333 0.00 0.00 0.00 2.83
2391 2774 7.066525 CCTTACCGGTCAATAATTGTGTATGTT 59.933 37.037 12.40 0.00 0.00 2.71
2392 2775 6.540914 CCTTACCGGTCAATAATTGTGTATGT 59.459 38.462 12.40 0.00 0.00 2.29
2393 2776 6.512741 GCCTTACCGGTCAATAATTGTGTATG 60.513 42.308 12.40 0.00 34.25 2.39
2394 2777 5.529800 GCCTTACCGGTCAATAATTGTGTAT 59.470 40.000 12.40 0.00 34.25 2.29
2395 2778 4.877251 GCCTTACCGGTCAATAATTGTGTA 59.123 41.667 12.40 0.00 34.25 2.90
2396 2779 3.692593 GCCTTACCGGTCAATAATTGTGT 59.307 43.478 12.40 0.00 34.25 3.72
2397 2780 3.242608 CGCCTTACCGGTCAATAATTGTG 60.243 47.826 12.40 0.00 34.25 3.33
2398 2781 2.940410 CGCCTTACCGGTCAATAATTGT 59.060 45.455 12.40 0.00 34.25 2.71
2399 2782 2.289547 CCGCCTTACCGGTCAATAATTG 59.710 50.000 12.40 0.00 43.24 2.32
2400 2783 2.567985 CCGCCTTACCGGTCAATAATT 58.432 47.619 12.40 0.00 43.24 1.40
2401 2784 2.249844 CCGCCTTACCGGTCAATAAT 57.750 50.000 12.40 0.00 43.24 1.28
2402 2785 3.764658 CCGCCTTACCGGTCAATAA 57.235 52.632 12.40 0.00 43.24 1.40
2410 2793 1.202114 TGTACAGTTACCGCCTTACCG 59.798 52.381 0.00 0.00 0.00 4.02
2411 2794 2.029110 TGTGTACAGTTACCGCCTTACC 60.029 50.000 0.00 0.00 0.00 2.85
2412 2795 3.302365 TGTGTACAGTTACCGCCTTAC 57.698 47.619 0.00 0.00 0.00 2.34
2413 2796 4.057432 GTTTGTGTACAGTTACCGCCTTA 58.943 43.478 0.00 0.00 0.00 2.69
2414 2797 2.874086 GTTTGTGTACAGTTACCGCCTT 59.126 45.455 0.00 0.00 0.00 4.35
2415 2798 2.103601 AGTTTGTGTACAGTTACCGCCT 59.896 45.455 0.00 0.00 0.00 5.52
2416 2799 2.486918 AGTTTGTGTACAGTTACCGCC 58.513 47.619 0.00 0.00 0.00 6.13
2417 2800 4.687483 ACATAGTTTGTGTACAGTTACCGC 59.313 41.667 0.00 0.00 37.11 5.68
2428 2811 8.768979 TGGGAACATTTGTCACATAGTTTGTGT 61.769 37.037 12.61 0.00 45.88 3.72
2429 2812 6.460814 TGGGAACATTTGTCACATAGTTTGTG 60.461 38.462 7.34 7.34 46.60 3.33
2430 2813 5.596361 TGGGAACATTTGTCACATAGTTTGT 59.404 36.000 0.00 0.00 34.90 2.83
2431 2814 5.920273 GTGGGAACATTTGTCACATAGTTTG 59.080 40.000 0.00 0.00 46.14 2.93
2432 2815 5.833131 AGTGGGAACATTTGTCACATAGTTT 59.167 36.000 0.00 0.00 46.14 2.66
2433 2816 5.385198 AGTGGGAACATTTGTCACATAGTT 58.615 37.500 0.00 0.00 46.14 2.24
2434 2817 4.985538 AGTGGGAACATTTGTCACATAGT 58.014 39.130 0.00 0.00 46.14 2.12
2435 2818 5.964958 AAGTGGGAACATTTGTCACATAG 57.035 39.130 0.00 0.00 46.14 2.23
2436 2819 7.825331 TTTAAGTGGGAACATTTGTCACATA 57.175 32.000 0.00 0.00 46.14 2.29
2437 2820 6.723298 TTTAAGTGGGAACATTTGTCACAT 57.277 33.333 0.00 0.00 46.14 3.21
2438 2821 6.531503 TTTTAAGTGGGAACATTTGTCACA 57.468 33.333 0.00 0.00 46.14 3.58
2439 2822 7.042119 CCATTTTTAAGTGGGAACATTTGTCAC 60.042 37.037 0.00 0.00 46.14 3.67
2440 2823 6.989169 CCATTTTTAAGTGGGAACATTTGTCA 59.011 34.615 0.00 0.00 46.14 3.58
2441 2824 6.073276 GCCATTTTTAAGTGGGAACATTTGTC 60.073 38.462 6.21 0.00 46.14 3.18
2442 2825 5.762711 GCCATTTTTAAGTGGGAACATTTGT 59.237 36.000 6.21 0.00 46.14 2.83
2443 2826 5.762218 TGCCATTTTTAAGTGGGAACATTTG 59.238 36.000 6.21 0.00 46.14 2.32
2444 2827 5.762711 GTGCCATTTTTAAGTGGGAACATTT 59.237 36.000 6.21 0.00 46.14 2.32
2445 2828 5.071653 AGTGCCATTTTTAAGTGGGAACATT 59.928 36.000 6.21 0.00 46.14 2.71
2446 2829 4.592778 AGTGCCATTTTTAAGTGGGAACAT 59.407 37.500 6.21 0.00 46.14 2.71
2447 2830 3.964031 AGTGCCATTTTTAAGTGGGAACA 59.036 39.130 6.21 0.00 37.59 3.18
2448 2831 4.600692 AGTGCCATTTTTAAGTGGGAAC 57.399 40.909 6.21 0.00 37.59 3.62
2449 2832 5.777732 ACATAGTGCCATTTTTAAGTGGGAA 59.222 36.000 6.21 0.00 37.59 3.97
2450 2833 5.184864 CACATAGTGCCATTTTTAAGTGGGA 59.815 40.000 6.21 0.56 36.00 4.37
2451 2834 5.184864 TCACATAGTGCCATTTTTAAGTGGG 59.815 40.000 6.21 0.00 36.00 4.61
2452 2835 6.266168 TCACATAGTGCCATTTTTAAGTGG 57.734 37.500 0.03 0.03 38.55 4.00
2453 2836 9.289303 GTTATCACATAGTGCCATTTTTAAGTG 57.711 33.333 0.00 0.00 32.98 3.16
2454 2837 9.019656 TGTTATCACATAGTGCCATTTTTAAGT 57.980 29.630 0.00 0.00 32.98 2.24
2460 2843 9.578576 AGATTATGTTATCACATAGTGCCATTT 57.421 29.630 0.24 0.00 44.94 2.32
2461 2844 9.006839 CAGATTATGTTATCACATAGTGCCATT 57.993 33.333 0.24 0.00 44.94 3.16
2462 2845 7.609146 CCAGATTATGTTATCACATAGTGCCAT 59.391 37.037 0.24 0.00 44.94 4.40
2463 2846 6.936335 CCAGATTATGTTATCACATAGTGCCA 59.064 38.462 0.24 0.00 44.94 4.92
2464 2847 6.128172 GCCAGATTATGTTATCACATAGTGCC 60.128 42.308 0.24 0.00 44.94 5.01
2465 2848 6.427853 TGCCAGATTATGTTATCACATAGTGC 59.572 38.462 0.24 0.00 44.94 4.40
2466 2849 7.967890 TGCCAGATTATGTTATCACATAGTG 57.032 36.000 0.24 1.13 44.94 2.74
2467 2850 8.213679 AGTTGCCAGATTATGTTATCACATAGT 58.786 33.333 0.31 0.00 44.94 2.12
2468 2851 8.613060 AGTTGCCAGATTATGTTATCACATAG 57.387 34.615 0.31 0.00 44.94 2.23
2469 2852 8.839343 CAAGTTGCCAGATTATGTTATCACATA 58.161 33.333 0.00 0.00 42.24 2.29
2470 2853 7.340232 ACAAGTTGCCAGATTATGTTATCACAT 59.660 33.333 1.81 0.00 46.07 3.21
2471 2854 6.658816 ACAAGTTGCCAGATTATGTTATCACA 59.341 34.615 1.81 0.00 37.31 3.58
2472 2855 6.968904 CACAAGTTGCCAGATTATGTTATCAC 59.031 38.462 1.81 0.00 0.00 3.06
2473 2856 6.883756 TCACAAGTTGCCAGATTATGTTATCA 59.116 34.615 1.81 0.00 0.00 2.15
2474 2857 7.189512 GTCACAAGTTGCCAGATTATGTTATC 58.810 38.462 1.81 0.00 0.00 1.75
2475 2858 6.183360 CGTCACAAGTTGCCAGATTATGTTAT 60.183 38.462 1.81 0.00 0.00 1.89
2476 2859 5.121611 CGTCACAAGTTGCCAGATTATGTTA 59.878 40.000 1.81 0.00 0.00 2.41
2477 2860 4.083324 CGTCACAAGTTGCCAGATTATGTT 60.083 41.667 1.81 0.00 0.00 2.71
2478 2861 3.436704 CGTCACAAGTTGCCAGATTATGT 59.563 43.478 1.81 0.00 0.00 2.29
2479 2862 3.684305 TCGTCACAAGTTGCCAGATTATG 59.316 43.478 1.81 0.00 0.00 1.90
2480 2863 3.684788 GTCGTCACAAGTTGCCAGATTAT 59.315 43.478 1.81 0.00 0.00 1.28
2481 2864 3.064207 GTCGTCACAAGTTGCCAGATTA 58.936 45.455 1.81 0.00 0.00 1.75
2482 2865 1.873591 GTCGTCACAAGTTGCCAGATT 59.126 47.619 1.81 0.00 0.00 2.40
2483 2866 1.202639 TGTCGTCACAAGTTGCCAGAT 60.203 47.619 1.81 0.00 0.00 2.90
2484 2867 0.176910 TGTCGTCACAAGTTGCCAGA 59.823 50.000 1.81 0.00 0.00 3.86
2485 2868 1.013596 TTGTCGTCACAAGTTGCCAG 58.986 50.000 1.81 0.00 37.61 4.85
2486 2869 1.454201 TTTGTCGTCACAAGTTGCCA 58.546 45.000 1.81 0.00 43.54 4.92
2487 2870 2.096819 TCTTTTGTCGTCACAAGTTGCC 59.903 45.455 1.81 0.00 43.54 4.52
2488 2871 3.398954 TCTTTTGTCGTCACAAGTTGC 57.601 42.857 1.81 0.00 43.54 4.17
2489 2872 6.021468 GTGATTTCTTTTGTCGTCACAAGTTG 60.021 38.462 0.00 0.00 43.54 3.16
2490 2873 6.027749 GTGATTTCTTTTGTCGTCACAAGTT 58.972 36.000 8.12 0.00 43.54 2.66
2491 2874 5.354234 AGTGATTTCTTTTGTCGTCACAAGT 59.646 36.000 8.12 0.00 43.54 3.16
2492 2875 5.678483 CAGTGATTTCTTTTGTCGTCACAAG 59.322 40.000 2.65 2.65 43.54 3.16
2493 2876 5.352846 TCAGTGATTTCTTTTGTCGTCACAA 59.647 36.000 6.15 0.00 40.97 3.33
2494 2877 4.873259 TCAGTGATTTCTTTTGTCGTCACA 59.127 37.500 6.15 0.00 38.65 3.58
2495 2878 5.403897 TCAGTGATTTCTTTTGTCGTCAC 57.596 39.130 0.00 0.00 36.98 3.67
2496 2879 5.504010 GCTTCAGTGATTTCTTTTGTCGTCA 60.504 40.000 0.00 0.00 0.00 4.35
2497 2880 4.906437 GCTTCAGTGATTTCTTTTGTCGTC 59.094 41.667 0.00 0.00 0.00 4.20
2498 2881 4.335315 TGCTTCAGTGATTTCTTTTGTCGT 59.665 37.500 0.00 0.00 0.00 4.34
2499 2882 4.672413 GTGCTTCAGTGATTTCTTTTGTCG 59.328 41.667 0.00 0.00 0.00 4.35
2500 2883 4.672413 CGTGCTTCAGTGATTTCTTTTGTC 59.328 41.667 0.00 0.00 0.00 3.18
2501 2884 4.096382 ACGTGCTTCAGTGATTTCTTTTGT 59.904 37.500 0.00 0.00 0.00 2.83
2502 2885 4.601019 ACGTGCTTCAGTGATTTCTTTTG 58.399 39.130 0.00 0.00 0.00 2.44
2503 2886 4.335315 TGACGTGCTTCAGTGATTTCTTTT 59.665 37.500 0.00 0.00 0.00 2.27
2504 2887 3.876914 TGACGTGCTTCAGTGATTTCTTT 59.123 39.130 0.00 0.00 0.00 2.52
2505 2888 3.466836 TGACGTGCTTCAGTGATTTCTT 58.533 40.909 0.00 0.00 0.00 2.52
2506 2889 3.111853 TGACGTGCTTCAGTGATTTCT 57.888 42.857 0.00 0.00 0.00 2.52
2507 2890 3.545633 GTTGACGTGCTTCAGTGATTTC 58.454 45.455 0.00 0.00 0.00 2.17
2508 2891 2.032894 CGTTGACGTGCTTCAGTGATTT 60.033 45.455 0.00 0.00 34.11 2.17
2509 2892 1.526887 CGTTGACGTGCTTCAGTGATT 59.473 47.619 0.00 0.00 34.11 2.57
2510 2893 1.139989 CGTTGACGTGCTTCAGTGAT 58.860 50.000 0.00 0.00 34.11 3.06
2511 2894 2.588731 CGTTGACGTGCTTCAGTGA 58.411 52.632 0.00 0.00 34.11 3.41
2528 2911 1.128692 GGGCTTTCAAACGATCTCACG 59.871 52.381 0.00 0.00 39.31 4.35
2529 2912 2.416893 GAGGGCTTTCAAACGATCTCAC 59.583 50.000 0.00 0.00 0.00 3.51
2530 2913 2.303022 AGAGGGCTTTCAAACGATCTCA 59.697 45.455 0.00 0.00 0.00 3.27
2531 2914 2.933260 GAGAGGGCTTTCAAACGATCTC 59.067 50.000 0.00 0.00 0.00 2.75
2532 2915 2.675317 CGAGAGGGCTTTCAAACGATCT 60.675 50.000 0.00 0.00 0.00 2.75
2533 2916 1.661112 CGAGAGGGCTTTCAAACGATC 59.339 52.381 0.00 0.00 0.00 3.69
2534 2917 1.726853 CGAGAGGGCTTTCAAACGAT 58.273 50.000 0.00 0.00 0.00 3.73
2535 2918 3.210857 CGAGAGGGCTTTCAAACGA 57.789 52.632 0.00 0.00 0.00 3.85
2548 2931 1.324005 GGTGGGTTCTCCTCCGAGAG 61.324 65.000 0.00 0.00 45.86 3.20
2549 2932 1.305046 GGTGGGTTCTCCTCCGAGA 60.305 63.158 0.00 0.00 43.62 4.04
2550 2933 3.300013 GGTGGGTTCTCCTCCGAG 58.700 66.667 0.00 0.00 39.16 4.63
2562 2945 1.524008 GCCTTTCTTTCACCGGTGGG 61.524 60.000 33.40 24.32 40.11 4.61
2563 2946 1.524008 GGCCTTTCTTTCACCGGTGG 61.524 60.000 33.40 18.31 0.00 4.61
2564 2947 1.852067 CGGCCTTTCTTTCACCGGTG 61.852 60.000 29.26 29.26 40.18 4.94
2565 2948 1.599797 CGGCCTTTCTTTCACCGGT 60.600 57.895 0.00 0.00 40.18 5.28
2566 2949 2.978018 GCGGCCTTTCTTTCACCGG 61.978 63.158 0.00 0.00 43.99 5.28
2567 2950 0.672401 TAGCGGCCTTTCTTTCACCG 60.672 55.000 0.00 0.00 46.50 4.94
2568 2951 1.530323 TTAGCGGCCTTTCTTTCACC 58.470 50.000 0.00 0.00 0.00 4.02
2569 2952 2.223044 CGATTAGCGGCCTTTCTTTCAC 60.223 50.000 0.00 0.00 36.03 3.18
2570 2953 2.006888 CGATTAGCGGCCTTTCTTTCA 58.993 47.619 0.00 0.00 36.03 2.69
2571 2954 2.739293 CGATTAGCGGCCTTTCTTTC 57.261 50.000 0.00 0.00 36.03 2.62
2582 2965 3.843510 GCAAACCGTTAATCCGATTAGCG 60.844 47.826 23.15 23.15 45.20 4.26
2583 2966 3.614588 GCAAACCGTTAATCCGATTAGC 58.385 45.455 5.19 5.19 0.00 3.09
2584 2967 3.857194 CGCAAACCGTTAATCCGATTAG 58.143 45.455 1.21 0.00 0.00 1.73
2585 2968 3.929417 CGCAAACCGTTAATCCGATTA 57.071 42.857 0.00 0.00 0.00 1.75
2586 2969 2.817538 CGCAAACCGTTAATCCGATT 57.182 45.000 0.00 0.00 0.00 3.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.